Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21989.t1 | XP_003589467.1 | 89.5 | 457 | 48 | 0 | 1 | 457 | 1 | 457 | 5.00E-229 | 803.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21989.t1 | Q54UB1 | 31.5 | 444 | 268 | 5 | 14 | 454 | 37 | 447 | 2.2e-55 | 218.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21989.t1 | G7I755 | 89.5 | 457 | 48 | 0 | 1 | 457 | 1 | 457 | 3.6e-229 | 803.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene21989 | MS.gene002506 | PPI |
| MS.gene21989 | MS.gene99758 | PPI |
| MS.gene21989 | MS.gene01479 | PPI |
| MS.gene21989 | MS.gene77102 | PPI |
| MS.gene21989 | MS.gene30726 | PPI |
| MS.gene21989 | MS.gene059414 | PPI |
| MS.gene21989 | MS.gene047362 | PPI |
| MS.gene21989 | MS.gene066758 | PPI |
| MS.gene21989 | MS.gene054179 | PPI |
| MS.gene21989 | MS.gene004176 | PPI |
| MS.gene21989 | MS.gene054180 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21989.t1 | MTR_1g024920 | 96.280 | 457 | 17 | 0 | 1 | 457 | 1 | 457 | 0.0 | 915 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21989.t1 | AT2G45730 | 62.528 | 451 | 140 | 5 | 10 | 457 | 22 | 446 | 0.0 | 519 |
Find 100 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAAGTATCCATTGAAAAT+TGG | 0.166239 | 3.3:+41040397 | MS.gene21989:CDS |
| ATGGTTGGTGGCCTTCTTAC+TGG | 0.198600 | 3.3:+41040989 | MS.gene21989:CDS |
| CAATGGATACTTCTTGAAAT+AGG | 0.217844 | 3.3:-41040389 | None:intergenic |
| TCCAGCCTTTATAGCTTTGC+AGG | 0.222527 | 3.3:-41042230 | None:intergenic |
| ATCTCTCATTCGTCAGAAAA+TGG | 0.252753 | 3.3:+41042142 | MS.gene21989:CDS |
| AAGTGCAATTTACATTTAAT+TGG | 0.259398 | 3.3:-41042009 | None:intergenic |
| ATTGACTCGTGGAAGGAAAA+TGG | 0.273917 | 3.3:+41042274 | MS.gene21989:CDS |
| TGTATCAAATGTTGCGCTAT+TGG | 0.277954 | 3.3:-41039333 | None:intergenic |
| TTTGTATGCAATTCATATCT+TGG | 0.278999 | 3.3:+41041287 | MS.gene21989:CDS |
| CAATCTACAGCTTGAGAAAA+TGG | 0.282349 | 3.3:+41042999 | MS.gene21989:CDS |
| GAAAATGGAATTTCTGATCT+TGG | 0.300851 | 3.3:+41042157 | MS.gene21989:CDS |
| TATCTTCACCAGTGAGGCTT+TGG | 0.305154 | 3.3:-41038978 | None:intergenic |
| CGTTAGCCATTGAAAGTAGA+AGG | 0.321154 | 3.3:-41040934 | None:intergenic |
| TGACATTCTCGTTGTTGATA+TGG | 0.336210 | 3.3:+41040970 | MS.gene21989:CDS |
| AAGAGCCTGCAAAGCTATAA+AGG | 0.342065 | 3.3:+41042225 | MS.gene21989:CDS |
| CTAATACCTTTAGGCTGAAA+TGG | 0.345043 | 3.3:-41037834 | None:intergenic |
| TTCTGAATTGTTGTCACAAA+AGG | 0.352491 | 3.3:+41041940 | MS.gene21989:CDS |
| GCATGCAAATGAGTGCATTT+GGG | 0.359567 | 3.3:+41043275 | MS.gene21989:CDS |
| AGAAGTATCCATTGAAAATT+GGG | 0.361508 | 3.3:+41040398 | MS.gene21989:CDS |
| TGCATGCAAATGAGTGCATT+TGG | 0.363049 | 3.3:+41043274 | MS.gene21989:CDS |
| CTGCACCAGACTTGGATACT+TGG | 0.382708 | 3.3:+41042403 | MS.gene21989:CDS |
| GGACGTCTCATAAGTACTTT+TGG | 0.387747 | 3.3:-41039800 | None:intergenic |
| ATCTTCACCAGTGAGGCTTT+GGG | 0.389493 | 3.3:-41038977 | None:intergenic |
| ACACCGCCGTCATCATGTTT+CGG | 0.399115 | 3.3:-41041980 | None:intergenic |
| GGTGCTGTGGCAGAGCGTTT+AGG | 0.400582 | 3.3:+41041010 | MS.gene21989:CDS |
| TATTTATCACCAATATCTTC+AGG | 0.407320 | 3.3:+41042476 | MS.gene21989:CDS |
| CTATCTCCATTTCAGCCTAA+AGG | 0.408430 | 3.3:+41037828 | MS.gene21989:CDS |
| AATTGCAGAAAATTGAAGAT+TGG | 0.413722 | 3.3:+41037717 | MS.gene21989:intron |
| ATTGTCCCTTCTACTTTCAA+TGG | 0.417484 | 3.3:+41040928 | MS.gene21989:CDS |
| CCACTGATTGGTTGTCCATT+CGG | 0.418479 | 3.3:+41037762 | MS.gene21989:CDS |
| AAAGGTCACCTTCGAGCAAC+AGG | 0.421884 | 3.3:-41039821 | None:intergenic |
| TATTGGTGATAAATAGCAAA+TGG | 0.425158 | 3.3:-41042468 | None:intergenic |
| TGCTCACTACACCCACTGAT+TGG | 0.425749 | 3.3:+41037750 | MS.gene21989:CDS |
| TTATTTATTGCAGAATTGTA+AGG | 0.438615 | 3.3:+41041909 | MS.gene21989:intron |
| AGACTTGGATACTTGGACAT+TGG | 0.439819 | 3.3:+41042410 | MS.gene21989:CDS |
| ATTGGTGATAAATAGCAAAT+GGG | 0.443406 | 3.3:-41042467 | None:intergenic |
| AGCTATAAAGGCTGGAGAAA+AGG | 0.443779 | 3.3:+41042237 | MS.gene21989:CDS |
| GCCTGCAAAGCTATAAAGGC+TGG | 0.451952 | 3.3:+41042229 | MS.gene21989:CDS |
| TTGTGACAACAATTCAGAAA+TGG | 0.460444 | 3.3:-41041936 | None:intergenic |
| AATTATTGCTGCACCAGACT+TGG | 0.479316 | 3.3:+41042395 | MS.gene21989:CDS |
| TATATGCAGGCAGGGTGCTA+AGG | 0.479379 | 3.3:+41039283 | MS.gene21989:intron |
| CTGGTGAGTTGAGGGACAAC+CGG | 0.488388 | 3.3:+41038932 | MS.gene21989:CDS |
| CTCGTTGTTGATATGGTTGG+TGG | 0.492274 | 3.3:+41040977 | MS.gene21989:CDS |
| CAACTCGACACTTCTTCCGA+TGG | 0.492634 | 3.3:+41037795 | MS.gene21989:CDS |
| AGAAAAGAAACTGACGCTGC+AGG | 0.498093 | 3.3:-41037620 | None:intergenic |
| GGGGCAGAGTTTGATAAAAG+TGG | 0.504966 | 3.3:-41042447 | None:intergenic |
| GGCTGAAATGGAGATAGAAA+AGG | 0.507220 | 3.3:-41037822 | None:intergenic |
| AATACTGCCCAAAGCCTCAC+TGG | 0.508455 | 3.3:+41038970 | MS.gene21989:CDS |
| CTGCCACAGCACCAGTAAGA+AGG | 0.510669 | 3.3:-41041000 | None:intergenic |
| AATGTCCAAGTATCCAAGTC+TGG | 0.512151 | 3.3:-41042408 | None:intergenic |
| CTCTGTTATTTGCAATCCAA+TGG | 0.519916 | 3.3:-41043022 | None:intergenic |
| TCAACTCACTGGTGAGTTGA+GGG | 0.520736 | 3.3:+41038924 | MS.gene21989:CDS |
| TCTTGGACAGGCACCATCCA+TGG | 0.531216 | 3.3:+41041304 | MS.gene21989:CDS |
| ATGCAATTCATATCTTGGAC+AGG | 0.532059 | 3.3:+41041292 | MS.gene21989:CDS |
| GCCTTGGCTACGTGAATACC+AGG | 0.532354 | 3.3:+41043044 | MS.gene21989:CDS |
| CAGCTTGAGAAAATGGCCAT+TGG | 0.533840 | 3.3:+41043006 | MS.gene21989:CDS |
| AATGCACTCATTTGCATGCA+CGG | 0.534233 | 3.3:-41043271 | None:intergenic |
| ATTCTCGTTGTTGATATGGT+TGG | 0.536995 | 3.3:+41040974 | MS.gene21989:CDS |
| TTCCAAGCCGAGTCAAAAGA+TGG | 0.538940 | 3.3:+41038901 | MS.gene21989:CDS |
| AACACTGAAGAAATAAAAGA+TGG | 0.541792 | 3.3:+41038874 | MS.gene21989:CDS |
| ATATGCAGGCAGGGTGCTAA+GGG | 0.541866 | 3.3:+41039284 | MS.gene21989:intron |
| GATTGCAAATAACAGAGCCT+TGG | 0.542512 | 3.3:+41043028 | MS.gene21989:CDS |
| GCTTTGCAGGCTCTTAGAGC+AGG | 0.543207 | 3.3:-41042217 | None:intergenic |
| TCAAAAGATGGTCAACTCAC+TGG | 0.544032 | 3.3:+41038913 | MS.gene21989:CDS |
| GTCAACTCACTGGTGAGTTG+AGG | 0.545293 | 3.3:+41038923 | MS.gene21989:CDS |
| ACAATAAGAAAAGAGTTACA+TGG | 0.552508 | 3.3:+41037534 | MS.gene21989:CDS |
| AAATATCCTCACAATATCCA+TGG | 0.553785 | 3.3:-41041321 | None:intergenic |
| TAAGTGACGAAATCTGCAAA+AGG | 0.554822 | 3.3:+41041348 | MS.gene21989:CDS |
| ATGCACTCATTTGCATGCAC+GGG | 0.558786 | 3.3:-41043270 | None:intergenic |
| CCGAATGGACAACCAATCAG+TGG | 0.571182 | 3.3:-41037762 | None:intergenic |
| ATGCACGGGTGAGTTCTTGA+CGG | 0.572376 | 3.3:-41043256 | None:intergenic |
| CTCAAGAAATCATTGACTCG+TGG | 0.573979 | 3.3:+41042263 | MS.gene21989:CDS |
| AAGAAAAGAGTTACATGGGA+AGG | 0.576519 | 3.3:+41037539 | MS.gene21989:CDS |
| GGCTCTTAGAGCAGGAAATG+TGG | 0.580777 | 3.3:-41042209 | None:intergenic |
| AGAAATCATTGACTCGTGGA+AGG | 0.586169 | 3.3:+41042267 | MS.gene21989:CDS |
| AGATAGAAAAGGAGCGCCAT+CGG | 0.586805 | 3.3:-41037811 | None:intergenic |
| TGGCCTTCTTACTGGTGCTG+TGG | 0.592640 | 3.3:+41040997 | MS.gene21989:CDS |
| CATGCAAATGAGTGCATTTG+GGG | 0.597684 | 3.3:+41043276 | MS.gene21989:CDS |
| TATTATTGTCGATCAACGAC+CGG | 0.599829 | 3.3:-41038951 | None:intergenic |
| ATCCTCACAATATCCATGGA+TGG | 0.603371 | 3.3:-41041317 | None:intergenic |
| ACCTGGTATTCACGTAGCCA+AGG | 0.606267 | 3.3:-41043045 | None:intergenic |
| GAAACATGATGACGGCGGTG+TGG | 0.610162 | 3.3:+41041982 | MS.gene21989:CDS |
| TTGTGCATGCACGTTGCTAG+AGG | 0.610249 | 3.3:-41042979 | None:intergenic |
| CTAATTCAGATTCTTGCGTG+TGG | 0.610376 | 3.3:+41040901 | MS.gene21989:intron |
| CAATAAGAAAAGAGTTACAT+GGG | 0.610785 | 3.3:+41037535 | MS.gene21989:CDS |
| AATATGTGCATCAGTCAGCA+TGG | 0.624090 | 3.3:+41042114 | MS.gene21989:CDS |
| CACCATCCATGGATATTGTG+AGG | 0.625248 | 3.3:+41041315 | MS.gene21989:CDS |
| AGTTTGATAAAAGTGGTAAG+AGG | 0.632055 | 3.3:-41042440 | None:intergenic |
| AAGATATAGAAGACATGCGA+AGG | 0.637003 | 3.3:+41038995 | MS.gene21989:CDS |
| CGAATGGACAACCAATCAGT+GGG | 0.640707 | 3.3:-41037761 | None:intergenic |
| GTTAGCCATTGAAAGTAGAA+GGG | 0.644218 | 3.3:-41040933 | None:intergenic |
| TGAGACGTCCTGTTGCTCGA+AGG | 0.645575 | 3.3:+41039813 | MS.gene21989:CDS |
| TTGGTGATAAATAGCAAATG+GGG | 0.648921 | 3.3:-41042466 | None:intergenic |
| CAAAATCCGAAACATGATGA+CGG | 0.657397 | 3.3:+41041974 | MS.gene21989:CDS |
| CTTCTATATCTTCACCAGTG+AGG | 0.664706 | 3.3:-41038984 | None:intergenic |
| GTCTTGCTTGATATCAACGA+TGG | 0.678428 | 3.3:+41037569 | MS.gene21989:CDS |
| GCTGTGGCAGAGCGTTTAGG+AGG | 0.683534 | 3.3:+41041013 | MS.gene21989:CDS |
| ATGTGCATCAGTCAGCATGG+AGG | 0.746880 | 3.3:+41042117 | MS.gene21989:CDS |
| AATCCGAAACATGATGACGG+CGG | 0.747356 | 3.3:+41041977 | MS.gene21989:CDS |
| ATGCAAATGAGTGCATTTGG+GGG | 0.754346 | 3.3:+41043277 | MS.gene21989:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAATATTTTATATGTCTT+TGG | + | chr3.3:41040042-41040061 | MS.gene21989:intron | 10.0% |
| !!! | TTTTAACCTAAAAAAATAAT+TGG | - | chr3.3:41041401-41041420 | None:intergenic | 10.0% |
| !! | AGAAATATGGTATATTATAA+AGG | + | chr3.3:41038174-41038193 | MS.gene21989:intron | 15.0% |
| !! | CAATAATAACAGAAAAATAA+AGG | - | chr3.3:41039842-41039861 | None:intergenic | 15.0% |
| !! | GAAATATGGTATATTATAAA+GGG | + | chr3.3:41038175-41038194 | MS.gene21989:intron | 15.0% |
| !! | GATATAAATTTAAACTTAGT+TGG | + | chr3.3:41041039-41041058 | MS.gene21989:intron | 15.0% |
| !! | TAAAGATGTATTTATTTATC+TGG | - | chr3.3:41039146-41039165 | None:intergenic | 15.0% |
| !! | TAATCATATATTTCTTATTC+AGG | + | chr3.3:41043228-41043247 | MS.gene21989:intron | 15.0% |
| !! | TATAATTTCTTTCTATGTTT+GGG | + | chr3.3:41039231-41039250 | MS.gene21989:intron | 15.0% |
| !! | TATATATATCTTAGAACTTT+GGG | - | chr3.3:41038396-41038415 | None:intergenic | 15.0% |
| !! | TGAATAGTGATTTATTATAA+AGG | + | chr3.3:41042527-41042546 | MS.gene21989:intron | 15.0% |
| !! | TTAAAAGTTAGATAGAAATA+TGG | + | chr3.3:41038161-41038180 | MS.gene21989:intron | 15.0% |
| !! | TTATAATTTCTTTCTATGTT+TGG | + | chr3.3:41039230-41039249 | MS.gene21989:intron | 15.0% |
| !! | TTATATATATCTTAGAACTT+TGG | - | chr3.3:41038397-41038416 | None:intergenic | 15.0% |
| !!! | AAAATTATGCCAAATTTTTA+AGG | + | chr3.3:41042662-41042681 | MS.gene21989:intron | 15.0% |
| !!! | AAATTATGCCAAATTTTTAA+GGG | + | chr3.3:41042663-41042682 | MS.gene21989:intron | 15.0% |
| !!! | AAATTGTTTTCATAAATTCT+TGG | - | chr3.3:41038049-41038068 | None:intergenic | 15.0% |
| !!! | ATTCTTGATTTTTGTTTTTT+GGG | + | chr3.3:41040684-41040703 | MS.gene21989:intron | 15.0% |
| !!! | ATTTTGCTACTTTTTTAATA+TGG | + | chr3.3:41041070-41041089 | MS.gene21989:intron | 15.0% |
| !!! | GAAAAATAAAAGCTTTAAAA+AGG | - | chr3.3:41041497-41041516 | None:intergenic | 15.0% |
| !!! | TATTCTTGATTTTTGTTTTT+TGG | + | chr3.3:41040683-41040702 | MS.gene21989:intron | 15.0% |
| !!! | TATTTACAAAAGTACATAAA+GGG | + | chr3.3:41043119-41043138 | MS.gene21989:intron | 15.0% |
| !!! | TGAGTTTTTCTTTTATAATT+TGG | + | chr3.3:41042365-41042384 | MS.gene21989:intron | 15.0% |
| !!! | TTATGTACTTTTGTAAATAA+AGG | - | chr3.3:41043118-41043137 | None:intergenic | 15.0% |
| !!! | TTATTTACAAAAGTACATAA+AGG | + | chr3.3:41043118-41043137 | MS.gene21989:intron | 15.0% |
| !!! | TTTATTTTTCAGAAATAGTT+TGG | + | chr3.3:41041507-41041526 | MS.gene21989:intron | 15.0% |
| !!! | TTTTATAATATATATAGCTC+AGG | + | chr3.3:41041625-41041644 | MS.gene21989:intron | 15.0% |
| !! | AAAGATATTGTAACACAAAA+AGG | - | chr3.3:41040280-41040299 | None:intergenic | 20.0% |
| !! | AAATGTTTATAGGTTTCTTA+TGG | + | chr3.3:41041658-41041677 | MS.gene21989:intron | 20.0% |
| !! | AAGATATTGTAACACAAAAA+GGG | - | chr3.3:41040279-41040298 | None:intergenic | 20.0% |
| !! | AAGTGCAATTTACATTTAAT+TGG | - | chr3.3:41042012-41042031 | None:intergenic | 20.0% |
| !! | AATCAAAGAGAAATGTTTAT+AGG | + | chr3.3:41041648-41041667 | MS.gene21989:intron | 20.0% |
| !! | AATCAAATATGTACATGATA+TGG | + | chr3.3:41040008-41040027 | MS.gene21989:intron | 20.0% |
| !! | AATGTTTATAGGTTTCTTAT+GGG | + | chr3.3:41041659-41041678 | MS.gene21989:intron | 20.0% |
| !! | ATAGTGATTTATTATAAAGG+AGG | + | chr3.3:41042530-41042549 | MS.gene21989:intron | 20.0% |
| !! | ATTGAAAATATTATCATGCA+CGG | - | chr3.3:41042559-41042578 | None:intergenic | 20.0% |
| !! | CAAAATTCTTATACATTTCA+AGG | - | chr3.3:41040584-41040603 | None:intergenic | 20.0% |
| !! | GAAAAAAAATTCAAACCAAA+AGG | - | chr3.3:41040208-41040227 | None:intergenic | 20.0% |
| !! | GTATATTATAAAGGGAATTA+TGG | + | chr3.3:41038183-41038202 | MS.gene21989:intron | 20.0% |
| !! | TAAATAACTATGACTCTATT+TGG | - | chr3.3:41038471-41038490 | None:intergenic | 20.0% |
| !! | TAAATGATTGATTACATCAA+AGG | - | chr3.3:41041771-41041790 | None:intergenic | 20.0% |
| !! | TAGATAAAGAGTAAACAATT+TGG | - | chr3.3:41039711-41039730 | None:intergenic | 20.0% |
| !! | TTATGATATTCTATATATGC+AGG | + | chr3.3:41039270-41039289 | MS.gene21989:intron | 20.0% |
| !! | TTATTTATTGCAGAATTGTA+AGG | + | chr3.3:41041909-41041928 | MS.gene21989:intron | 20.0% |
| !! | TTCTATAACTTTGATATAGA+CGG | + | chr3.3:41039119-41039138 | MS.gene21989:intron | 20.0% |
| !! | TTGTTTGTTTGCTTTATAAA+CGG | + | chr3.3:41042953-41042972 | MS.gene21989:intron | 20.0% |
| !!! | AGTCTACCAATTATTTTTTT+AGG | + | chr3.3:41041392-41041411 | MS.gene21989:intron | 20.0% |
| !!! | CTGAATTTGTTATTAATATC+TGG | + | chr3.3:41040712-41040731 | MS.gene21989:intron | 20.0% |
| !!! | GTTTTGTTTTGTTTCTTTTA+AGG | + | chr3.3:41042585-41042604 | MS.gene21989:intron | 20.0% |
| !!! | TAAGTTTTACAATCTAAAGT+TGG | + | chr3.3:41041246-41041265 | MS.gene21989:intron | 20.0% |
| !!! | TAATTTTTTTGTTACTGTCT+AGG | + | chr3.3:41041793-41041812 | MS.gene21989:intron | 20.0% |
| !!! | TTATATTTGAGCTATTCTTT+TGG | + | chr3.3:41040452-41040471 | MS.gene21989:intron | 20.0% |
| !!! | TTCTTGATTTTTGTTTTTTG+GGG | + | chr3.3:41040685-41040704 | MS.gene21989:intron | 20.0% |
| !!! | TTTTTTAGGTTAAAATCATG+CGG | + | chr3.3:41041406-41041425 | MS.gene21989:intron | 20.0% |
| ! | AACACTGAAGAAATAAAAGA+TGG | + | chr3.3:41038874-41038893 | MS.gene21989:CDS | 25.0% |
| ! | AATTGCAGAAAATTGAAGAT+TGG | + | chr3.3:41037717-41037736 | MS.gene21989:intron | 25.0% |
| ! | ACAATAAGAAAAGAGTTACA+TGG | + | chr3.3:41037534-41037553 | MS.gene21989:CDS | 25.0% |
| ! | ACAATCTCTAAACAAATTTG+AGG | + | chr3.3:41040181-41040200 | MS.gene21989:intron | 25.0% |
| ! | AGAAAAGAAGAAGAAAATTG+AGG | - | chr3.3:41037653-41037672 | None:intergenic | 25.0% |
| ! | AGATATTGTAACACAAAAAG+GGG | - | chr3.3:41040278-41040297 | None:intergenic | 25.0% |
| ! | ATAACAGAAGTAAATGCATA+TGG | - | chr3.3:41040436-41040455 | None:intergenic | 25.0% |
| ! | ATACCTACTAATTCAACATA+TGG | - | chr3.3:41041689-41041708 | None:intergenic | 25.0% |
| ! | ATGTGTGGCTATTATATAAT+TGG | + | chr3.3:41040825-41040844 | MS.gene21989:intron | 25.0% |
| ! | ATGTTGAATTAGTAGGTATT+AGG | + | chr3.3:41041690-41041709 | MS.gene21989:intron | 25.0% |
| ! | CAAAAATTACCTGAAGATAT+TGG | - | chr3.3:41042488-41042507 | None:intergenic | 25.0% |
| ! | CAATAAGAAAAGAGTTACAT+GGG | + | chr3.3:41037535-41037554 | MS.gene21989:CDS | 25.0% |
| ! | CAATCTCTAAACAAATTTGA+GGG | + | chr3.3:41040182-41040201 | MS.gene21989:intron | 25.0% |
| ! | CTAACTTTGGTTATAACTTT+AGG | + | chr3.3:41042628-41042647 | MS.gene21989:intron | 25.0% |
| ! | CTATGTATATATCCTTGAAT+TGG | + | chr3.3:41040861-41040880 | MS.gene21989:intron | 25.0% |
| ! | TATAGTCTGAAAAATGTGAA+GGG | + | chr3.3:41040794-41040813 | MS.gene21989:intron | 25.0% |
| ! | TATTTATCACCAATATCTTC+AGG | + | chr3.3:41042476-41042495 | MS.gene21989:CDS | 25.0% |
| ! | TCTATAACTTTGATATAGAC+GGG | + | chr3.3:41039120-41039139 | MS.gene21989:intron | 25.0% |
| ! | TGTTACTAACATTACCTAAA+TGG | - | chr3.3:41038858-41038877 | None:intergenic | 25.0% |
| ! | TGTTTGATCCCTTAAAAATT+TGG | - | chr3.3:41042674-41042693 | None:intergenic | 25.0% |
| ! | TTATAGTCTGAAAAATGTGA+AGG | + | chr3.3:41040793-41040812 | MS.gene21989:intron | 25.0% |
| ! | TTCCATTCTTAACAATCTTT+GGG | + | chr3.3:41041172-41041191 | MS.gene21989:intron | 25.0% |
| ! | TTTCCATTCTTAACAATCTT+TGG | + | chr3.3:41041171-41041190 | MS.gene21989:intron | 25.0% |
| ! | TTTGTATGCAATTCATATCT+TGG | + | chr3.3:41041287-41041306 | MS.gene21989:CDS | 25.0% |
| !! | AAAAGAAGTAGCATCTTTTA+TGG | + | chr3.3:41039684-41039703 | MS.gene21989:intron | 25.0% |
| !! | AAAATTTTCAAAGCTTCCTT+TGG | + | chr3.3:41042874-41042893 | MS.gene21989:intron | 25.0% |
| !! | ATTGGTGATAAATAGCAAAT+GGG | - | chr3.3:41042470-41042489 | None:intergenic | 25.0% |
| !! | TATTGGTGATAAATAGCAAA+TGG | - | chr3.3:41042471-41042490 | None:intergenic | 25.0% |
| !! | TTTAGAGTGAAGATGTAATT+TGG | + | chr3.3:41039426-41039445 | MS.gene21989:intron | 25.0% |
| !!! | AAGAAGTATCCATTGAAAAT+TGG | + | chr3.3:41040397-41040416 | MS.gene21989:CDS | 25.0% |
| !!! | AGAAGTATCCATTGAAAATT+GGG | + | chr3.3:41040398-41040417 | MS.gene21989:CDS | 25.0% |
| !!! | CATATAAGCTGTTTTCATAA+GGG | - | chr3.3:41038123-41038142 | None:intergenic | 25.0% |
| !!! | GATACACATGCTTTAAAAAT+TGG | + | chr3.3:41040608-41040627 | MS.gene21989:intron | 25.0% |
| !!! | GGTCAAAACTTGTTATAAAT+TGG | + | chr3.3:41038617-41038636 | MS.gene21989:intron | 25.0% |
| !!! | GTTGTTTTTGATAAAGTTTG+TGG | - | chr3.3:41040662-41040681 | None:intergenic | 25.0% |
| !!! | TCATATAAGCTGTTTTCATA+AGG | - | chr3.3:41038124-41038143 | None:intergenic | 25.0% |
| AAATATCCTCACAATATCCA+TGG | - | chr3.3:41041324-41041343 | None:intergenic | 30.0% | |
| AATAAACCAATCCAAACAGA+CGG | - | chr3.3:41037988-41038007 | None:intergenic | 30.0% | |
| ACATTCAGACAAGTTGTATA+AGG | - | chr3.3:41041840-41041859 | None:intergenic | 30.0% | |
| ACTTATCATTACAAGCGATT+GGG | + | chr3.3:41038419-41038438 | MS.gene21989:intron | 30.0% | |
| AGTTTGATAAAAGTGGTAAG+AGG | - | chr3.3:41042443-41042462 | None:intergenic | 30.0% | |
| ATAGTCTGAAAAATGTGAAG+GGG | + | chr3.3:41040795-41040814 | MS.gene21989:intron | 30.0% | |
| ATATCAGATTTGCACAGAAT+TGG | - | chr3.3:41043203-41043222 | None:intergenic | 30.0% | |
| ATATTCTATATATGCAGGCA+GGG | + | chr3.3:41039275-41039294 | MS.gene21989:intron | 30.0% | |
| ATATTGAACTAGTTGCTAAG+TGG | - | chr3.3:41038666-41038685 | None:intergenic | 30.0% | |
| ATCGATATGTATACTTAGAG+AGG | + | chr3.3:41042766-41042785 | MS.gene21989:intron | 30.0% | |
| ATGCTGTTGAAAACTAACAA+TGG | - | chr3.3:41038590-41038609 | None:intergenic | 30.0% | |
| CAATGGATACTTCTTGAAAT+AGG | - | chr3.3:41040392-41040411 | None:intergenic | 30.0% | |
| CCTGAACAAAAGTTTATAAG+CGG | + | chr3.3:41038320-41038339 | MS.gene21989:intron | 30.0% | |
| CTGAACAAAAGTTTATAAGC+GGG | + | chr3.3:41038321-41038340 | MS.gene21989:intron | 30.0% | |
| GAAAATGGAATTTCTGATCT+TGG | + | chr3.3:41042157-41042176 | MS.gene21989:CDS | 30.0% | |
| GACAAAAATAGCTAAATACC+TGG | - | chr3.3:41043065-41043084 | None:intergenic | 30.0% | |
| GTTAGTTAGAAACCAATTCA+AGG | - | chr3.3:41040876-41040895 | None:intergenic | 30.0% | |
| GTTTATTGTTCTGCTAACTT+TGG | + | chr3.3:41042615-41042634 | MS.gene21989:intron | 30.0% | |
| TACCCAAAGATTGTTAAGAA+TGG | - | chr3.3:41041177-41041196 | None:intergenic | 30.0% | |
| TACTAACATTACCTAAATGG+TGG | - | chr3.3:41038855-41038874 | None:intergenic | 30.0% | |
| TAGCCATATGTTGAATTAGT+AGG | + | chr3.3:41041683-41041702 | MS.gene21989:intron | 30.0% | |
| TAGTAAGGATGCTATATTGA+AGG | - | chr3.3:41037961-41037980 | None:intergenic | 30.0% | |
| TATATCTTAGAACTTTGGGT+TGG | - | chr3.3:41038392-41038411 | None:intergenic | 30.0% | |
| TGAACAAAAGTTTATAAGCG+GGG | + | chr3.3:41038322-41038341 | MS.gene21989:intron | 30.0% | |
| TTCTGAATTGTTGTCACAAA+AGG | + | chr3.3:41041940-41041959 | MS.gene21989:CDS | 30.0% | |
| TTGTGACAACAATTCAGAAA+TGG | - | chr3.3:41041939-41041958 | None:intergenic | 30.0% | |
| ! | AAGGATGCTTCAATTTTGTA+TGG | - | chr3.3:41041752-41041771 | None:intergenic | 30.0% |
| ! | ACATCTTACCCAATTTTCAA+TGG | - | chr3.3:41040409-41040428 | None:intergenic | 30.0% |
| ! | ATATCTTAGAACTTTGGGTT+GGG | - | chr3.3:41038391-41038410 | None:intergenic | 30.0% |
| ! | CTGTTTTCATAAGGGATTTT+GGG | - | chr3.3:41038115-41038134 | None:intergenic | 30.0% |
| ! | CTTCAATTTTGTATGGTGAT+TGG | - | chr3.3:41041745-41041764 | None:intergenic | 30.0% |
| ! | TAGTTTGGAACACTTTGTAT+TGG | + | chr3.3:41041522-41041541 | MS.gene21989:intron | 30.0% |
| ! | TTGGTGATAAATAGCAAATG+GGG | - | chr3.3:41042469-41042488 | None:intergenic | 30.0% |
| !! | ATGTTCAACTTGTTTTCATG+AGG | + | chr3.3:41038087-41038106 | MS.gene21989:intron | 30.0% |
| !! | GTTTTCAACAGCATTTTTTG+TGG | + | chr3.3:41038596-41038615 | MS.gene21989:intron | 30.0% |
| !! | TTGACTGATTCTTAGTTTGT+AGG | - | chr3.3:41043171-41043190 | None:intergenic | 30.0% |
| !!! | ATCTAAAGTTGGTGTTTTAC+AGG | + | chr3.3:41041257-41041276 | MS.gene21989:intron | 30.0% |
| !!! | GAAGTTTTGTTTCTTTTGTC+TGG | + | chr3.3:41041869-41041888 | MS.gene21989:intron | 30.0% |
| !!! | TGTTTTTTGCAGTATATGTG+AGG | + | chr3.3:41040366-41040385 | MS.gene21989:intron | 30.0% |
| AAACGCAAGAAAAGTGAACT+CGG | - | chr3.3:41040749-41040768 | None:intergenic | 35.0% | |
| AAGAAAAGAGTTACATGGGA+AGG | + | chr3.3:41037539-41037558 | MS.gene21989:CDS | 35.0% | |
| AAGATATAGAAGACATGCGA+AGG | + | chr3.3:41038995-41039014 | MS.gene21989:CDS | 35.0% | |
| ACATCCATTTGAGCTATATG+AGG | + | chr3.3:41038722-41038741 | MS.gene21989:intron | 35.0% | |
| ACATCTTTAATGTCCGTATG+TGG | + | chr3.3:41040509-41040528 | MS.gene21989:intron | 35.0% | |
| ACTAGTTGCTAAGTGGTTAT+CGG | - | chr3.3:41038659-41038678 | None:intergenic | 35.0% | |
| ATCCAATGTAAGGCTCTTAA+CGG | - | chr3.3:41038291-41038310 | None:intergenic | 35.0% | |
| ATCTCTCATTCGTCAGAAAA+TGG | + | chr3.3:41042142-41042161 | MS.gene21989:CDS | 35.0% | |
| ATGCAATTCATATCTTGGAC+AGG | + | chr3.3:41041292-41041311 | MS.gene21989:CDS | 35.0% | |
| ATTCTCGTTGTTGATATGGT+TGG | + | chr3.3:41040974-41040993 | MS.gene21989:CDS | 35.0% | |
| ATTGTCCCTTCTACTTTCAA+TGG | + | chr3.3:41040928-41040947 | MS.gene21989:CDS | 35.0% | |
| ATTTAACTATCCTGTACTCC+TGG | + | chr3.3:41042816-41042835 | MS.gene21989:intron | 35.0% | |
| CAAAATCCGAAACATGATGA+CGG | + | chr3.3:41041974-41041993 | MS.gene21989:CDS | 35.0% | |
| CAAACAGACGGTATATAGTA+AGG | - | chr3.3:41037976-41037995 | None:intergenic | 35.0% | |
| CAATCTACAGCTTGAGAAAA+TGG | + | chr3.3:41042999-41043018 | MS.gene21989:CDS | 35.0% | |
| CACTTATCATTACAAGCGAT+TGG | + | chr3.3:41038418-41038437 | MS.gene21989:intron | 35.0% | |
| CATCCATTTGAGCTATATGA+GGG | + | chr3.3:41038723-41038742 | MS.gene21989:intron | 35.0% | |
| CCTTACAAAACCAGTTTGTA+AGG | - | chr3.3:41038358-41038377 | None:intergenic | 35.0% | |
| CTAATACCTTTAGGCTGAAA+TGG | - | chr3.3:41037837-41037856 | None:intergenic | 35.0% | |
| CTTACTATATACCGTCTGTT+TGG | + | chr3.3:41037974-41037993 | MS.gene21989:intron | 35.0% | |
| GACGATACCAAATAATCGAA+GGG | + | chr3.3:41039633-41039652 | MS.gene21989:intron | 35.0% | |
| GATAACCATAAGTCATTGAG+TGG | - | chr3.3:41040340-41040359 | None:intergenic | 35.0% | |
| GATATTCTATATATGCAGGC+AGG | + | chr3.3:41039274-41039293 | MS.gene21989:intron | 35.0% | |
| GTATAAGCTATTCCTATAGC+AGG | - | chr3.3:41038269-41038288 | None:intergenic | 35.0% | |
| GTTAGCCATTGAAAGTAGAA+GGG | - | chr3.3:41040936-41040955 | None:intergenic | 35.0% | |
| TAAGTGACGAAATCTGCAAA+AGG | + | chr3.3:41041348-41041367 | MS.gene21989:CDS | 35.0% | |
| TACAAAAACGTCATTCTCAC+AGG | + | chr3.3:41039352-41039371 | MS.gene21989:CDS | 35.0% | |
| TATATACCGTCTGTTTGGAT+TGG | + | chr3.3:41037979-41037998 | MS.gene21989:intron | 35.0% | |
| TATTATTGTCGATCAACGAC+CGG | - | chr3.3:41038954-41038973 | None:intergenic | 35.0% | |
| TGACATTCTCGTTGTTGATA+TGG | + | chr3.3:41040970-41040989 | MS.gene21989:CDS | 35.0% | |
| TGACGATACCAAATAATCGA+AGG | + | chr3.3:41039632-41039651 | MS.gene21989:intron | 35.0% | |
| TGTAGATCATGTGTAGGTTT+GGG | + | chr3.3:41042843-41042862 | MS.gene21989:intron | 35.0% | |
| TGTATCAAATGTTGCGCTAT+TGG | - | chr3.3:41039336-41039355 | None:intergenic | 35.0% | |
| TGTATCCACTCAATGACTTA+TGG | + | chr3.3:41040332-41040351 | MS.gene21989:intron | 35.0% | |
| TGTCTATACAAATCAGTTCC+AGG | + | chr3.3:41039488-41039507 | MS.gene21989:intron | 35.0% | |
| TGTTACAGAAAAGCAAGATG+TGG | - | chr3.3:41039200-41039219 | None:intergenic | 35.0% | |
| TTAATGTCCGTATGTGGTTT+AGG | + | chr3.3:41040515-41040534 | MS.gene21989:intron | 35.0% | |
| ! | AAACAAATTTGAGGGCCTTT+TGG | + | chr3.3:41040190-41040209 | MS.gene21989:intron | 35.0% |
| ! | AGGTTATCTGCGATTGATTT+CGG | + | chr3.3:41038750-41038769 | MS.gene21989:intron | 35.0% |
| ! | AGTTGAAAAACAGTACCGAA+TGG | - | chr3.3:41037780-41037799 | None:intergenic | 35.0% |
| ! | CCGCTTATAAACTTTTGTTC+AGG | - | chr3.3:41038323-41038342 | None:intergenic | 35.0% |
| ! | CTCTGTTATTTGCAATCCAA+TGG | - | chr3.3:41043025-41043044 | None:intergenic | 35.0% |
| ! | CTGATTTGTATAGACAGAAG+AGG | - | chr3.3:41039484-41039503 | None:intergenic | 35.0% |
| ! | GAACAGAAGCATGATCTATT+TGG | - | chr3.3:41042909-41042928 | None:intergenic | 35.0% |
| ! | GGAAGGAAAATGGTTTTTCT+AGG | + | chr3.3:41042284-41042303 | MS.gene21989:CDS | 35.0% |
| ! | TGCATCTAGAGCTATTCATT+TGG | - | chr3.3:41041590-41041609 | None:intergenic | 35.0% |
| !! | AGTTCACTTTTCTTGCGTTT+TGG | + | chr3.3:41040749-41040768 | MS.gene21989:intron | 35.0% |
| !! | ATTAGCACTGACACATATAC+CGG | + | chr3.3:41037852-41037871 | MS.gene21989:intron | 35.0% |
| !! | GCTGTTTTCATAAGGGATTT+TGG | - | chr3.3:41038116-41038135 | None:intergenic | 35.0% |
| !! | TATATGTCTTTGGAGCATCT+GGG | + | chr3.3:41040052-41040071 | MS.gene21989:intron | 35.0% |
| !! | TTATATGTCTTTGGAGCATC+TGG | + | chr3.3:41040051-41040070 | MS.gene21989:intron | 35.0% |
| !!! | CCTTACAAACTGGTTTTGTA+AGG | + | chr3.3:41038355-41038374 | MS.gene21989:intron | 35.0% |
| !!! | TCTTTTATTTTGATCCCCGA+GGG | - | chr3.3:41039670-41039689 | None:intergenic | 35.0% |
| !!! | TGAGGACATCTTGTTTTGTT+TGG | + | chr3.3:41039018-41039037 | MS.gene21989:intron | 35.0% |
| !!! | TGGTTTTGTAAGGTTGAGTT+AGG | + | chr3.3:41038365-41038384 | MS.gene21989:intron | 35.0% |
| !!! | TTCTTTTATTTTGATCCCCG+AGG | - | chr3.3:41039671-41039690 | None:intergenic | 35.0% |
| AAGAGCCTGCAAAGCTATAA+AGG | + | chr3.3:41042225-41042244 | MS.gene21989:CDS | 40.0% | |
| AATATGTGCATCAGTCAGCA+TGG | + | chr3.3:41042114-41042133 | MS.gene21989:CDS | 40.0% | |
| AATGCACTCATTTGCATGCA+CGG | - | chr3.3:41043274-41043293 | None:intergenic | 40.0% | |
| AATGTCCAAGTATCCAAGTC+TGG | - | chr3.3:41042411-41042430 | None:intergenic | 40.0% | |
| AATTATTGCTGCACCAGACT+TGG | + | chr3.3:41042395-41042414 | MS.gene21989:CDS | 40.0% | |
| ACAGTCTTCACCTTACAAAC+TGG | + | chr3.3:41038345-41038364 | MS.gene21989:intron | 40.0% | |
| AGACTTGGATACTTGGACAT+TGG | + | chr3.3:41042410-41042429 | MS.gene21989:CDS | 40.0% | |
| AGCTATAAAGGCTGGAGAAA+AGG | + | chr3.3:41042237-41042256 | MS.gene21989:CDS | 40.0% | |
| ATCCTCACAATATCCATGGA+TGG | - | chr3.3:41041320-41041339 | None:intergenic | 40.0% | |
| ATGCAAATGAGTGCATTTGG+GGG | + | chr3.3:41043277-41043296 | MS.gene21989:CDS | 40.0% | |
| CATGCAAATGAGTGCATTTG+GGG | + | chr3.3:41043276-41043295 | MS.gene21989:CDS | 40.0% | |
| CATTTGAGCTATATGAGGGA+GGG | + | chr3.3:41038727-41038746 | MS.gene21989:intron | 40.0% | |
| CGTTAGCCATTGAAAGTAGA+AGG | - | chr3.3:41040937-41040956 | None:intergenic | 40.0% | |
| CTAATTCAGATTCTTGCGTG+TGG | + | chr3.3:41040901-41040920 | MS.gene21989:intron | 40.0% | |
| CTATCTCCATTTCAGCCTAA+AGG | + | chr3.3:41037828-41037847 | MS.gene21989:CDS | 40.0% | |
| CTGTTCACTCAGCATGTTAA+CGG | + | chr3.3:41042923-41042942 | MS.gene21989:intron | 40.0% | |
| CTTCTATATCTTCACCAGTG+AGG | - | chr3.3:41038987-41039006 | None:intergenic | 40.0% | |
| GATTGCAAATAACAGAGCCT+TGG | + | chr3.3:41043028-41043047 | MS.gene21989:CDS | 40.0% | |
| GCATGCAAATGAGTGCATTT+GGG | + | chr3.3:41043275-41043294 | MS.gene21989:CDS | 40.0% | |
| GCCTTACATTGGATGAGATA+AGG | + | chr3.3:41038297-41038316 | MS.gene21989:intron | 40.0% | |
| GCCTTATCTCATCCAATGTA+AGG | - | chr3.3:41038301-41038320 | None:intergenic | 40.0% | |
| GGCTGAAATGGAGATAGAAA+AGG | - | chr3.3:41037825-41037844 | None:intergenic | 40.0% | |
| GTAGTCACCCTTCGATTATT+TGG | - | chr3.3:41039643-41039662 | None:intergenic | 40.0% | |
| GTCTTGCTTGATATCAACGA+TGG | + | chr3.3:41037569-41037588 | MS.gene21989:CDS | 40.0% | |
| GTGTAGATCATGTGTAGGTT+TGG | + | chr3.3:41042842-41042861 | MS.gene21989:intron | 40.0% | |
| GTGTCAGTGCTAATACCTTT+AGG | - | chr3.3:41037846-41037865 | None:intergenic | 40.0% | |
| TAAAGATGCCACACATCTAC+AGG | - | chr3.3:41040776-41040795 | None:intergenic | 40.0% | |
| TACATCTCGATCCACCATTT+AGG | + | chr3.3:41038841-41038860 | MS.gene21989:intron | 40.0% | |
| TACCGTTAAGAGCCTTACAT+TGG | + | chr3.3:41038286-41038305 | MS.gene21989:intron | 40.0% | |
| TATTTGGCATTCAGTGCCAA+AGG | - | chr3.3:41042893-41042912 | None:intergenic | 40.0% | |
| TCAAAAGATGGTCAACTCAC+TGG | + | chr3.3:41038913-41038932 | MS.gene21989:CDS | 40.0% | |
| TCTCTGACCTAAACCACATA+CGG | - | chr3.3:41040525-41040544 | None:intergenic | 40.0% | |
| TCTTGTCGAATAGTGCCAAA+AGG | - | chr3.3:41040134-41040153 | None:intergenic | 40.0% | |
| TGCATGCAAATGAGTGCATT+TGG | + | chr3.3:41043274-41043293 | MS.gene21989:CDS | 40.0% | |
| TTTCTCTTTCAGTGCATCAG+TGG | - | chr3.3:41041467-41041486 | None:intergenic | 40.0% | |
| ! | ACTTGTTGCAACATGAAGAC+TGG | - | chr3.3:41041442-41041461 | None:intergenic | 40.0% |
| ! | AGAGTAAAAACGAAGAGTGC+AGG | - | chr3.3:41038804-41038823 | None:intergenic | 40.0% |
| ! | GATTGATTTCGGCTTCTTTG+TGG | + | chr3.3:41038761-41038780 | MS.gene21989:intron | 40.0% |
| ! | GGACGTCTCATAAGTACTTT+TGG | - | chr3.3:41039803-41039822 | None:intergenic | 40.0% |
| ! | TCTGGGTTTTGCTCTGATAA+TGG | + | chr3.3:41040069-41040088 | MS.gene21989:intron | 40.0% |
| ! | TGGAACACTTTGTATTGGCA+TGG | + | chr3.3:41041527-41041546 | MS.gene21989:intron | 40.0% |
| ! | TTGTTGTTGTCTCCTGCTAT+AGG | + | chr3.3:41038254-41038273 | MS.gene21989:intron | 40.0% |
| !! | AAGTGGTTATCGGCTTATCA+TGG | - | chr3.3:41038649-41038668 | None:intergenic | 40.0% |
| !! | AGAAATCATTGACTCGTGGA+AGG | + | chr3.3:41042267-41042286 | MS.gene21989:CDS | 40.0% |
| !! | ATTGACTCGTGGAAGGAAAA+TGG | + | chr3.3:41042274-41042293 | MS.gene21989:CDS | 40.0% |
| !! | CTCAAGAAATCATTGACTCG+TGG | + | chr3.3:41042263-41042282 | MS.gene21989:CDS | 40.0% |
| !! | GAGTTGACCATCTTTTGACT+CGG | - | chr3.3:41038911-41038930 | None:intergenic | 40.0% |
| ACACATGATCTACACTCTCC+AGG | - | chr3.3:41042837-41042856 | None:intergenic | 45.0% | |
| ACTATCACCAAATGCCGGAA+GGG | - | chr3.3:41039531-41039550 | None:intergenic | 45.0% | |
| AGAAAAGAAACTGACGCTGC+AGG | - | chr3.3:41037623-41037642 | None:intergenic | 45.0% | |
| AGGGGAGCAAAGTGAAATCA+AGG | - | chr3.3:41040260-41040279 | None:intergenic | 45.0% | |
| ATAGAAGACATGCGAAGGTG+AGG | + | chr3.3:41039000-41039019 | MS.gene21989:intron | 45.0% | |
| ATCTTCACCAGTGAGGCTTT+GGG | - | chr3.3:41038980-41038999 | None:intergenic | 45.0% | |
| ATGCACTCATTTGCATGCAC+GGG | - | chr3.3:41043273-41043292 | None:intergenic | 45.0% | |
| CACCATCCATGGATATTGTG+AGG | + | chr3.3:41041315-41041334 | MS.gene21989:CDS | 45.0% | |
| CAGCTTGAGAAAATGGCCAT+TGG | + | chr3.3:41043006-41043025 | MS.gene21989:CDS | 45.0% | |
| CCATTTGAGCTATATGAGGG+AGG | + | chr3.3:41038726-41038745 | MS.gene21989:intron | 45.0% | |
| CCTCCCTCATATAGCTCAAA+TGG | - | chr3.3:41038729-41038748 | None:intergenic | 45.0% | |
| CGAATGGACAACCAATCAGT+GGG | - | chr3.3:41037764-41037783 | None:intergenic | 45.0% | |
| CTCGTTGTTGATATGGTTGG+TGG | + | chr3.3:41040977-41040996 | MS.gene21989:CDS | 45.0% | |
| GAAGCTCACTATATCTGTGC+AGG | + | chr3.3:41039742-41039761 | MS.gene21989:intron | 45.0% | |
| GGGGAGCAAAGTGAAATCAA+GGG | - | chr3.3:41040259-41040278 | None:intergenic | 45.0% | |
| GGGGCAGAGTTTGATAAAAG+TGG | - | chr3.3:41042450-41042469 | None:intergenic | 45.0% | |
| TACTCTCACTCTAACCTGCA+TGG | + | chr3.3:41038818-41038837 | MS.gene21989:intron | 45.0% | |
| TATCTTCACCAGTGAGGCTT+TGG | - | chr3.3:41038981-41039000 | None:intergenic | 45.0% | |
| TTCCAAGCCGAGTCAAAAGA+TGG | + | chr3.3:41038901-41038920 | MS.gene21989:CDS | 45.0% | |
| TTGGGGGTTACATTCTCAGT+GGG | + | chr3.3:41043293-41043312 | MS.gene21989:CDS | 45.0% | |
| TTTGGGGGTTACATTCTCAG+TGG | + | chr3.3:41043292-41043311 | MS.gene21989:CDS | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr3.3:41038232-41038251 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr3.3:41038233-41038252 | None:intergenic | 45.0% |
| ! | CCACTGATTGGTTGTCCATT+CGG | + | chr3.3:41037762-41037781 | MS.gene21989:CDS | 45.0% |
| ! | GGAGAGTGTAGATCATGTGT+AGG | + | chr3.3:41042837-41042856 | MS.gene21989:intron | 45.0% |
| ! | TCAACTCACTGGTGAGTTGA+GGG | + | chr3.3:41038924-41038943 | MS.gene21989:CDS | 45.0% |
| ! | TCCAGCCTTTATAGCTTTGC+AGG | - | chr3.3:41042233-41042252 | None:intergenic | 45.0% |
| !! | AATCCGAAACATGATGACGG+CGG | + | chr3.3:41041977-41041996 | MS.gene21989:CDS | 45.0% |
| !! | AGATAGAAAAGGAGCGCCAT+CGG | - | chr3.3:41037814-41037833 | None:intergenic | 45.0% |
| !! | AGTTGGTGTTTTACAGGCAC+TGG | + | chr3.3:41041263-41041282 | MS.gene21989:intron | 45.0% |
| !! | GTTTTGGACCTGTAGATGTG+TGG | + | chr3.3:41040765-41040784 | MS.gene21989:intron | 45.0% |
| AAAGGTCACCTTCGAGCAAC+AGG | - | chr3.3:41039824-41039843 | None:intergenic | 50.0% | |
| AAGGGTGACTACTTCACCCT+CGG | + | chr3.3:41039651-41039670 | MS.gene21989:intron | 50.0% | |
| AATACTGCCCAAAGCCTCAC+TGG | + | chr3.3:41038970-41038989 | MS.gene21989:CDS | 50.0% | |
| ACACCGCCGTCATCATGTTT+CGG | - | chr3.3:41041983-41042002 | None:intergenic | 50.0% | |
| ACCTGGTATTCACGTAGCCA+AGG | - | chr3.3:41043048-41043067 | None:intergenic | 50.0% | |
| ACTAAGTGGGGTCAGCTACA+TGG | - | chr3.3:41038220-41038239 | None:intergenic | 50.0% | |
| ATGCACGGGTGAGTTCTTGA+CGG | - | chr3.3:41043259-41043278 | None:intergenic | 50.0% | |
| ATGTAGCTGACCCCACTTAG+TGG | + | chr3.3:41038219-41038238 | MS.gene21989:intron | 50.0% | |
| ATGTGCATCAGTCAGCATGG+AGG | + | chr3.3:41042117-41042136 | MS.gene21989:CDS | 50.0% | |
| CAACTCGACACTTCTTCCGA+TGG | + | chr3.3:41037795-41037814 | MS.gene21989:CDS | 50.0% | |
| CACGCGCGTATTGTGTACTT+TGG | + | chr3.3:41039096-41039115 | MS.gene21989:intron | 50.0% | |
| CACTATCACCAAATGCCGGA+AGG | - | chr3.3:41039532-41039551 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr3.3:41038231-41038250 | MS.gene21989:intron | 50.0% | |
| CCGAATGGACAACCAATCAG+TGG | - | chr3.3:41037765-41037784 | None:intergenic | 50.0% | |
| CGCTCACTATCACCAAATGC+CGG | - | chr3.3:41039536-41039555 | None:intergenic | 50.0% | |
| CTGCACCAGACTTGGATACT+TGG | + | chr3.3:41042403-41042422 | MS.gene21989:CDS | 50.0% | |
| GCCTGCAAAGCTATAAAGGC+TGG | + | chr3.3:41042229-41042248 | MS.gene21989:CDS | 50.0% | |
| GGCTCTTAGAGCAGGAAATG+TGG | - | chr3.3:41042212-41042231 | None:intergenic | 50.0% | |
| GTCAACTCACTGGTGAGTTG+AGG | + | chr3.3:41038923-41038942 | MS.gene21989:CDS | 50.0% | |
| TGACCCCACTTAGTGGGATA+AGG | + | chr3.3:41038226-41038245 | MS.gene21989:intron | 50.0% | |
| TGCTAACAAGTCCACCCTTC+CGG | + | chr3.3:41039514-41039533 | MS.gene21989:intron | 50.0% | |
| TGCTCACTACACCCACTGAT+TGG | + | chr3.3:41037750-41037769 | MS.gene21989:CDS | 50.0% | |
| TGGATCGAGATGTACCATGC+AGG | - | chr3.3:41038835-41038854 | None:intergenic | 50.0% | |
| TGTAGCTGACCCCACTTAGT+GGG | + | chr3.3:41038220-41038239 | MS.gene21989:intron | 50.0% | |
| TTGAGCTATATGAGGGAGGG+AGG | + | chr3.3:41038730-41038749 | MS.gene21989:intron | 50.0% | |
| TTGTGCATGCACGTTGCTAG+AGG | - | chr3.3:41042982-41043001 | None:intergenic | 50.0% | |
| ! | ATATGCAGGCAGGGTGCTAA+GGG | + | chr3.3:41039284-41039303 | MS.gene21989:intron | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr3.3:41038234-41038253 | None:intergenic | 50.0% |
| ! | CTACGTGCTGTCATGCCTTT+TGG | + | chr3.3:41040116-41040135 | MS.gene21989:intron | 50.0% |
| ! | TATATGCAGGCAGGGTGCTA+AGG | + | chr3.3:41039283-41039302 | MS.gene21989:intron | 50.0% |
| ! | TCTACACTCTCCAGGAGTAC+AGG | - | chr3.3:41042829-41042848 | None:intergenic | 50.0% |
| !! | ATGGTTGGTGGCCTTCTTAC+TGG | + | chr3.3:41040989-41041008 | MS.gene21989:CDS | 50.0% |
| !! | GTCAGTGTCAGTGTCGTTTC+CGG | - | chr3.3:41037874-41037893 | None:intergenic | 50.0% |
| !! | GTGGACTTGTTAGCAAGTCC+TGG | - | chr3.3:41039509-41039528 | None:intergenic | 50.0% |
| !!! | GACCATCTTTTGACTCGGCT+TGG | - | chr3.3:41038906-41038925 | None:intergenic | 50.0% |
| AAGTCCACCCTTCCGGCATT+TGG | + | chr3.3:41039521-41039540 | MS.gene21989:intron | 55.0% | |
| AGGGTGACTACTTCACCCTC+GGG | + | chr3.3:41039652-41039671 | MS.gene21989:intron | 55.0% | |
| ATCACCAAATGCCGGAAGGG+TGG | - | chr3.3:41039528-41039547 | None:intergenic | 55.0% | |
| CTGCCACAGCACCAGTAAGA+AGG | - | chr3.3:41041003-41041022 | None:intergenic | 55.0% | |
| GCCTTGGCTACGTGAATACC+AGG | + | chr3.3:41043044-41043063 | MS.gene21989:CDS | 55.0% | |
| GCTTTGCAGGCTCTTAGAGC+AGG | - | chr3.3:41042220-41042239 | None:intergenic | 55.0% | |
| TCTTGGACAGGCACCATCCA+TGG | + | chr3.3:41041304-41041323 | MS.gene21989:CDS | 55.0% | |
| TGAGACGTCCTGTTGCTCGA+AGG | + | chr3.3:41039813-41039832 | MS.gene21989:CDS | 55.0% | |
| ! | CTGGTGAGTTGAGGGACAAC+CGG | + | chr3.3:41038932-41038951 | MS.gene21989:CDS | 55.0% |
| ! | TGAAGGGGTGTGTGCATGTG+TGG | + | chr3.3:41040810-41040829 | MS.gene21989:intron | 55.0% |
| ! | TGGCCTTCTTACTGGTGCTG+TGG | + | chr3.3:41040997-41041016 | MS.gene21989:CDS | 55.0% |
| !! | GAAACATGATGACGGCGGTG+TGG | + | chr3.3:41041982-41042001 | MS.gene21989:CDS | 55.0% |
| GGGTGACTACTTCACCCTCG+GGG | + | chr3.3:41039653-41039672 | MS.gene21989:intron | 60.0% | |
| ! | GCTGTGGCAGAGCGTTTAGG+AGG | + | chr3.3:41041013-41041032 | MS.gene21989:CDS | 60.0% |
| ! | GGTGCTGTGGCAGAGCGTTT+AGG | + | chr3.3:41041010-41041029 | MS.gene21989:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 41037518 | 41043336 | 41037518 | ID=MS.gene21989 |
| chr3.3 | mRNA | 41037518 | 41043336 | 41037518 | ID=MS.gene21989.t1;Parent=MS.gene21989 |
| chr3.3 | exon | 41037518 | 41037627 | 41037518 | ID=MS.gene21989.t1.exon1;Parent=MS.gene21989.t1 |
| chr3.3 | CDS | 41037518 | 41037627 | 41037518 | ID=cds.MS.gene21989.t1;Parent=MS.gene21989.t1 |
| chr3.3 | exon | 41037725 | 41037849 | 41037725 | ID=MS.gene21989.t1.exon2;Parent=MS.gene21989.t1 |
| chr3.3 | CDS | 41037725 | 41037849 | 41037725 | ID=cds.MS.gene21989.t1;Parent=MS.gene21989.t1 |
| chr3.3 | exon | 41038863 | 41039016 | 41038863 | ID=MS.gene21989.t1.exon3;Parent=MS.gene21989.t1 |
| chr3.3 | CDS | 41038863 | 41039016 | 41038863 | ID=cds.MS.gene21989.t1;Parent=MS.gene21989.t1 |
| chr3.3 | exon | 41039292 | 41039373 | 41039292 | ID=MS.gene21989.t1.exon4;Parent=MS.gene21989.t1 |
| chr3.3 | CDS | 41039292 | 41039373 | 41039292 | ID=cds.MS.gene21989.t1;Parent=MS.gene21989.t1 |
| chr3.3 | exon | 41039764 | 41039834 | 41039764 | ID=MS.gene21989.t1.exon5;Parent=MS.gene21989.t1 |
| chr3.3 | CDS | 41039764 | 41039834 | 41039764 | ID=cds.MS.gene21989.t1;Parent=MS.gene21989.t1 |
| chr3.3 | exon | 41040378 | 41040419 | 41040378 | ID=MS.gene21989.t1.exon6;Parent=MS.gene21989.t1 |
| chr3.3 | CDS | 41040378 | 41040419 | 41040378 | ID=cds.MS.gene21989.t1;Parent=MS.gene21989.t1 |
| chr3.3 | exon | 41040910 | 41041034 | 41040910 | ID=MS.gene21989.t1.exon7;Parent=MS.gene21989.t1 |
| chr3.3 | CDS | 41040910 | 41041034 | 41040910 | ID=cds.MS.gene21989.t1;Parent=MS.gene21989.t1 |
| chr3.3 | exon | 41041279 | 41041369 | 41041279 | ID=MS.gene21989.t1.exon8;Parent=MS.gene21989.t1 |
| chr3.3 | CDS | 41041279 | 41041369 | 41041279 | ID=cds.MS.gene21989.t1;Parent=MS.gene21989.t1 |
| chr3.3 | exon | 41041922 | 41042018 | 41041922 | ID=MS.gene21989.t1.exon9;Parent=MS.gene21989.t1 |
| chr3.3 | CDS | 41041922 | 41042018 | 41041922 | ID=cds.MS.gene21989.t1;Parent=MS.gene21989.t1 |
| chr3.3 | exon | 41042109 | 41042305 | 41042109 | ID=MS.gene21989.t1.exon10;Parent=MS.gene21989.t1 |
| chr3.3 | CDS | 41042109 | 41042305 | 41042109 | ID=cds.MS.gene21989.t1;Parent=MS.gene21989.t1 |
| chr3.3 | exon | 41042392 | 41042497 | 41042392 | ID=MS.gene21989.t1.exon11;Parent=MS.gene21989.t1 |
| chr3.3 | CDS | 41042392 | 41042497 | 41042392 | ID=cds.MS.gene21989.t1;Parent=MS.gene21989.t1 |
| chr3.3 | exon | 41042979 | 41043065 | 41042979 | ID=MS.gene21989.t1.exon12;Parent=MS.gene21989.t1 |
| chr3.3 | CDS | 41042979 | 41043065 | 41042979 | ID=cds.MS.gene21989.t1;Parent=MS.gene21989.t1 |
| chr3.3 | exon | 41043250 | 41043336 | 41043250 | ID=MS.gene21989.t1.exon13;Parent=MS.gene21989.t1 |
| chr3.3 | CDS | 41043250 | 41043336 | 41043250 | ID=cds.MS.gene21989.t1;Parent=MS.gene21989.t1 |
| Gene Sequence |
| Protein sequence |
