Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005318.t1 | XP_013469069.1 | 97.4 | 419 | 11 | 0 | 1 | 419 | 44 | 462 | 2.10E-221 | 778.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005318.t1 | Q9H6T3 | 38.4 | 138 | 75 | 3 | 52 | 179 | 137 | 274 | 3.4e-15 | 84.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005318.t1 | A0A072VMN4 | 97.4 | 419 | 11 | 0 | 1 | 419 | 44 | 462 | 1.5e-221 | 778.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene005318 | MS.gene30654 | PPI |
| MS.gene005318 | MS.gene040499 | PPI |
| MS.gene005318 | MS.gene62607 | PPI |
| MS.gene005318 | MS.gene60613 | PPI |
| MS.gene005318 | MS.gene061126 | PPI |
| MS.gene005318 | MS.gene49154 | PPI |
| MS.gene005318 | MS.gene006231 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005318.t1 | MTR_1g084100 | 97.375 | 419 | 11 | 0 | 1 | 419 | 44 | 462 | 0.0 | 846 |
| MS.gene005318.t1 | MTR_8g107280 | 41.414 | 99 | 57 | 1 | 52 | 149 | 483 | 581 | 2.48e-18 | 87.8 |
| MS.gene005318.t1 | MTR_4g094205 | 43.434 | 99 | 55 | 1 | 52 | 149 | 492 | 590 | 3.91e-17 | 84.0 |
| MS.gene005318.t1 | MTR_3g452710 | 38.393 | 112 | 68 | 1 | 44 | 154 | 7 | 118 | 2.70e-15 | 78.2 |
| MS.gene005318.t1 | MTR_3g452710 | 38.393 | 112 | 68 | 1 | 44 | 154 | 7 | 118 | 3.89e-15 | 77.4 |
| MS.gene005318.t1 | MTR_2g078020 | 31.387 | 137 | 87 | 2 | 55 | 190 | 469 | 599 | 2.84e-12 | 68.9 |
| MS.gene005318.t1 | MTR_2g078020 | 31.387 | 137 | 87 | 2 | 55 | 190 | 469 | 599 | 2.86e-12 | 68.9 |
| MS.gene005318.t1 | MTR_3g087480 | 33.929 | 112 | 73 | 1 | 55 | 165 | 463 | 574 | 8.48e-12 | 67.4 |
| MS.gene005318.t1 | MTR_1g030300 | 36.697 | 109 | 65 | 3 | 48 | 153 | 181 | 288 | 2.02e-11 | 65.9 |
| MS.gene005318.t1 | MTR_3g074230 | 33.628 | 113 | 68 | 2 | 55 | 166 | 431 | 537 | 5.94e-11 | 64.7 |
| MS.gene005318.t1 | MTR_3g074230 | 33.628 | 113 | 68 | 2 | 55 | 166 | 431 | 537 | 7.20e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005318.t1 | AT1G56440 | 51.878 | 426 | 173 | 6 | 21 | 420 | 47 | 466 | 1.48e-141 | 412 |
| MS.gene005318.t1 | AT1G56440 | 51.878 | 426 | 173 | 6 | 21 | 420 | 57 | 476 | 4.79e-141 | 411 |
| MS.gene005318.t1 | AT3G17970 | 43.750 | 112 | 60 | 2 | 39 | 149 | 467 | 576 | 2.23e-20 | 94.0 |
| MS.gene005318.t1 | AT5G09420 | 40.196 | 102 | 60 | 1 | 52 | 152 | 492 | 593 | 6.40e-16 | 80.1 |
| MS.gene005318.t1 | AT2G42810 | 38.393 | 112 | 68 | 1 | 44 | 154 | 9 | 120 | 2.49e-15 | 78.2 |
| MS.gene005318.t1 | AT2G42810 | 38.393 | 112 | 68 | 1 | 44 | 154 | 9 | 120 | 2.50e-15 | 78.2 |
| MS.gene005318.t1 | AT2G42810 | 38.393 | 112 | 68 | 1 | 44 | 154 | 9 | 120 | 3.54e-15 | 77.8 |
| MS.gene005318.t1 | AT2G42810 | 38.393 | 112 | 68 | 1 | 44 | 154 | 9 | 120 | 3.54e-15 | 77.8 |
| MS.gene005318.t1 | AT2G42810 | 38.393 | 112 | 68 | 1 | 44 | 154 | 9 | 120 | 3.54e-15 | 77.8 |
| MS.gene005318.t1 | AT2G42580 | 31.613 | 155 | 100 | 2 | 55 | 203 | 465 | 619 | 3.38e-12 | 68.9 |
| MS.gene005318.t1 | AT3G58620 | 28.743 | 167 | 113 | 2 | 44 | 204 | 445 | 611 | 3.92e-12 | 68.6 |
| MS.gene005318.t1 | AT3G58620 | 28.743 | 167 | 113 | 2 | 44 | 204 | 445 | 611 | 6.06e-12 | 68.2 |
| MS.gene005318.t1 | AT1G12270 | 31.343 | 134 | 82 | 2 | 28 | 151 | 354 | 487 | 5.81e-11 | 64.7 |
| MS.gene005318.t1 | AT4G12400 | 32.331 | 133 | 80 | 3 | 28 | 150 | 340 | 472 | 6.30e-11 | 64.7 |
| MS.gene005318.t1 | AT4G12400 | 32.331 | 133 | 80 | 3 | 28 | 150 | 340 | 472 | 7.23e-11 | 64.3 |
Find 79 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACAGATGCTTTCATTTC+CGG | 0.172259 | 1.1:+62356489 | None:intergenic |
| TTCTGGTGATCTTGCTTTGC+AGG | 0.179423 | 1.1:-62356364 | MS.gene005318:CDS |
| TTTCAAACAGAAGAAGTTTA+AGG | 0.181327 | 1.1:-62358937 | MS.gene005318:CDS |
| GTAACGATCATCGAGATTTA+AGG | 0.189585 | 1.1:+62358583 | None:intergenic |
| CTTGCCTTCTTAGCTTTATA+TGG | 0.195569 | 1.1:+62358841 | None:intergenic |
| GATGGAATATGCTGAGATTT+TGG | 0.198415 | 1.1:-62354703 | MS.gene005318:CDS |
| TTTGCAGGCTTGTCTATTAA+AGG | 0.222918 | 1.1:-62356349 | MS.gene005318:intron |
| CTGCTGTAGCCTATGCAAAT+AGG | 0.267162 | 1.1:-62358872 | MS.gene005318:CDS |
| GGAACTAGTTGTTAGTTATA+TGG | 0.274743 | 1.1:-62356024 | MS.gene005318:CDS |
| TTCTTGACTTCTTGATTGTT+AGG | 0.278082 | 1.1:+62358365 | None:intergenic |
| TACAGTGTTTCTTAGTGCTT+TGG | 0.287972 | 1.1:+62357164 | None:intergenic |
| AAGTCCGAGACAAAAGTTAA+TGG | 0.348282 | 1.1:-62357129 | MS.gene005318:CDS |
| TGCTAAAGAACCACTCTTGA+TGG | 0.363324 | 1.1:-62356872 | MS.gene005318:CDS |
| CTTATCAGTTTGAGGTCTCT+TGG | 0.365519 | 1.1:-62356395 | MS.gene005318:CDS |
| TGCTGTAGCCTATGCAAATA+GGG | 0.377706 | 1.1:-62358871 | MS.gene005318:CDS |
| CTGCAGATTTGCGCAAGATC+TGG | 0.380066 | 1.1:-62354755 | MS.gene005318:intron |
| CTCCGATCAAAATTCTATCT+TGG | 0.399644 | 1.1:-62354675 | MS.gene005318:CDS |
| ACTAGTAGGAAATGGTTCTA+AGG | 0.403610 | 1.1:-62356803 | MS.gene005318:CDS |
| TGAAGCTCATCGTCAAATAA+AGG | 0.403993 | 1.1:-62357055 | MS.gene005318:intron |
| TTGCCTTCTTAGCTTTATAT+GGG | 0.409244 | 1.1:+62358842 | None:intergenic |
| AACTACAGCTTATCAGTTTG+AGG | 0.411492 | 1.1:-62356403 | MS.gene005318:CDS |
| ATCAAGAGTGGTTCTTTAGC+AGG | 0.431104 | 1.1:+62356874 | None:intergenic |
| TGCAAGCCACAGCTTGGAAC+AGG | 0.445688 | 1.1:-62356770 | MS.gene005318:intron |
| AAGCTATTGATTGCTATTCA+AGG | 0.460436 | 1.1:-62358914 | MS.gene005318:CDS |
| CGATCAATGGGTGTGGAGAA+TGG | 0.466470 | 1.1:-62359381 | None:intergenic |
| ACTCAAGGACTAGTAGGAAA+TGG | 0.489220 | 1.1:-62356811 | MS.gene005318:CDS |
| TCTTTCTCAGAAGCAGCATC+AGG | 0.489375 | 1.1:+62359240 | None:intergenic |
| AACTAGCAGGGTAGAAGATA+AGG | 0.492686 | 1.1:+62356171 | None:intergenic |
| AGTTTGAGGTCTCTTGGAGA+GGG | 0.494603 | 1.1:-62356389 | MS.gene005318:CDS |
| GTTCTTTGCAGCTTCAGCCA+TGG | 0.504037 | 1.1:+62356437 | None:intergenic |
| GTGCCTTCCATCAGCTGCTA+AGG | 0.506136 | 1.1:-62355961 | MS.gene005318:CDS |
| TGCCGAGTTTGCCATGAGGT+TGG | 0.507363 | 1.1:-62358390 | MS.gene005318:CDS |
| CAGTTTGAGGTCTCTTGGAG+AGG | 0.513770 | 1.1:-62356390 | MS.gene005318:CDS |
| GATGGAGGAGATCACTAGTA+AGG | 0.515376 | 1.1:-62356854 | MS.gene005318:CDS |
| CACATCAAATCTCGGTACCT+TGG | 0.515743 | 1.1:+62355992 | None:intergenic |
| ACTTGATGATCTCAACTAGC+AGG | 0.517918 | 1.1:+62356158 | None:intergenic |
| TCAAGCTGCTTCTCGAGCCA+TGG | 0.518342 | 1.1:-62356454 | MS.gene005318:CDS |
| CTGCGCTGAGGCAACTCCGA+TGG | 0.520422 | 1.1:-62354721 | MS.gene005318:CDS |
| ATTGTTAGGTTCCAACCTCA+TGG | 0.526662 | 1.1:+62358379 | None:intergenic |
| TGGCCCATATAAAGCTAAGA+AGG | 0.528942 | 1.1:-62358845 | MS.gene005318:intron |
| GAGTCGTGTGAGTAGCAGTT+TGG | 0.530179 | 1.1:-62359277 | MS.gene005318:CDS |
| GGTGTGGAGAATGGATCAAA+AGG | 0.534741 | 1.1:-62359372 | MS.gene005318:CDS |
| GAGAAATCATAAAACTAAGC+CGG | 0.536442 | 1.1:-62356508 | MS.gene005318:CDS |
| AACTGATAAGCTGTAGTTGG+TGG | 0.540121 | 1.1:+62356408 | None:intergenic |
| ATACCATCCTTAGCAGCTGA+TGG | 0.542897 | 1.1:+62355954 | None:intergenic |
| GGCTACAGCAGTGGGTGAGA+AGG | 0.545729 | 1.1:+62358884 | None:intergenic |
| ATTTGACGATGAGCTTCAGT+TGG | 0.547813 | 1.1:+62357060 | None:intergenic |
| TTCCAACCTCATGGCAAACT+CGG | 0.550264 | 1.1:+62358388 | None:intergenic |
| AGCAGGACTCAAGGACTAGT+AGG | 0.551356 | 1.1:-62356817 | MS.gene005318:CDS |
| CAGCAGATTTCAAGAGGCTG+AGG | 0.559168 | 1.1:-62358621 | MS.gene005318:intron |
| TCAAACTGATAAGCTGTAGT+TGG | 0.559212 | 1.1:+62356405 | None:intergenic |
| GTAGGAAATGGTTCTAAGGA+AGG | 0.565761 | 1.1:-62356799 | MS.gene005318:CDS |
| TTATAATGCAAGCCACAGCT+TGG | 0.565861 | 1.1:-62356776 | MS.gene005318:CDS |
| AGGATACAAAATCTGCAAGC+AGG | 0.568821 | 1.1:-62356834 | MS.gene005318:CDS |
| GAGTGATCGATCAATGGGTG+TGG | 0.570518 | 1.1:-62359388 | None:intergenic |
| GCTTAACCTGTTCCAAGCTG+TGG | 0.570744 | 1.1:+62356764 | None:intergenic |
| CATCCTTAGCAGCTGATGGA+AGG | 0.574291 | 1.1:+62355958 | None:intergenic |
| AAATCTGCAAGCAGGACTCA+AGG | 0.576402 | 1.1:-62356826 | MS.gene005318:CDS |
| CTTCCATCAGCTGCTAAGGA+TGG | 0.577022 | 1.1:-62355957 | MS.gene005318:intron |
| GGCCATTGCCCTATTTGCAT+AGG | 0.577379 | 1.1:+62358863 | None:intergenic |
| GCAACGTCTAGAAAAGAACT+TGG | 0.582205 | 1.1:-62358539 | MS.gene005318:CDS |
| CTCGTACAGTGACTTAGCAT+CGG | 0.584635 | 1.1:+62358334 | None:intergenic |
| ATTACGATCACATCAAATCT+CGG | 0.593584 | 1.1:+62355984 | None:intergenic |
| ATGTGTCAGCAGATTTCAAG+AGG | 0.608715 | 1.1:-62358627 | MS.gene005318:intron |
| TTTGCATAGGCTACAGCAGT+GGG | 0.613483 | 1.1:+62358876 | None:intergenic |
| GTTACATAAAAGCATACTCT+CGG | 0.615745 | 1.1:-62358565 | MS.gene005318:CDS |
| AGCCTATGCAAATAGGGCAA+TGG | 0.619385 | 1.1:-62358865 | MS.gene005318:CDS |
| TGCTGCTTCTGAGAAAGACC+TGG | 0.631182 | 1.1:-62359235 | MS.gene005318:intron |
| TGCTAAGTCACTGTACGAGA+AGG | 0.634474 | 1.1:-62358330 | MS.gene005318:intron |
| TAGTACTATGTGAAACAGAG+TGG | 0.636916 | 1.1:+62357094 | None:intergenic |
| AAAATCTCAGCATATTCCAT+CGG | 0.638357 | 1.1:+62354705 | None:intergenic |
| CTTGATGATCTCAACTAGCA+GGG | 0.642984 | 1.1:+62356159 | None:intergenic |
| ATTTGCATAGGCTACAGCAG+TGG | 0.647481 | 1.1:+62358875 | None:intergenic |
| GTGATCTCCTCCATCAAGAG+TGG | 0.650649 | 1.1:+62356862 | None:intergenic |
| TTATATGGATAATTTAACCA+AGG | 0.659529 | 1.1:-62356009 | MS.gene005318:CDS |
| TAAAGAACCACTCTTGATGG+AGG | 0.671168 | 1.1:-62356869 | MS.gene005318:CDS |
| GGCTGAGGATGACTGTACAG+AGG | 0.702052 | 1.1:-62358606 | MS.gene005318:CDS |
| CAGATGCCGAGTTTGCCATG+AGG | 0.707223 | 1.1:-62358394 | MS.gene005318:CDS |
| ATACTTGTCAGGGTAATGAG+CGG | 0.714762 | 1.1:-62356903 | MS.gene005318:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAAATTTTCACTAAATTA+TGG | - | chr1.1:62355260-62355279 | MS.gene005318:intron | 10.0% |
| !! | AAGAAAAAGTAAACTTATTT+CGG | + | chr1.1:62359126-62359145 | None:intergenic | 15.0% |
| !! | TAGCAATAATAAATAGATTA+TGG | - | chr1.1:62355008-62355027 | MS.gene005318:intron | 15.0% |
| !! | TTTAGAAGCAAAATTTATTT+AGG | - | chr1.1:62357366-62357385 | MS.gene005318:intron | 15.0% |
| !!! | TTCTATTTTAATAGCTATAT+AGG | - | chr1.1:62355806-62355825 | MS.gene005318:intron | 15.0% |
| !! | AAAAATAAAGAATCAATGGA+GGG | - | chr1.1:62355528-62355547 | MS.gene005318:intron | 20.0% |
| !! | AAACAAAAAGGGAAATAAAT+GGG | - | chr1.1:62356605-62356624 | MS.gene005318:intron | 20.0% |
| !! | AATAAATACTTACGCAAAAA+AGG | + | chr1.1:62357920-62357939 | None:intergenic | 20.0% |
| !! | CTTTAAATCACCTTAAAAAT+TGG | - | chr1.1:62356572-62356591 | MS.gene005318:intron | 20.0% |
| !! | GGTGATTTAAAGAATTTATA+CGG | + | chr1.1:62356564-62356583 | None:intergenic | 20.0% |
| !! | TATCAACATAATCAAACTTA+AGG | + | chr1.1:62357123-62357142 | None:intergenic | 20.0% |
| !! | TTAAAACAAAAGATTTAACG+AGG | - | chr1.1:62358802-62358821 | MS.gene005318:intron | 20.0% |
| !! | TTATATGGATAATTTAACCA+AGG | - | chr1.1:62358034-62358053 | MS.gene005318:intron | 20.0% |
| !! | TTTAAATTCTGCAAAAAGAT+AGG | + | chr1.1:62358300-62358319 | None:intergenic | 20.0% |
| !!! | AAACAATTTTTTTATCCACA+GGG | + | chr1.1:62358578-62358597 | None:intergenic | 20.0% |
| !!! | AAGGCATTTTTGAATATTTT+CGG | + | chr1.1:62357856-62357875 | None:intergenic | 20.0% |
| !!! | GAAATCTTTTGAAAGTTTAA+AGG | - | chr1.1:62358169-62358188 | MS.gene005318:intron | 20.0% |
| !!! | GGTATGTATGTTTTTTATTA+GGG | - | chr1.1:62358107-62358126 | MS.gene005318:intron | 20.0% |
| !!! | GTATGTATGTTTTTTATTAG+GGG | - | chr1.1:62358108-62358127 | MS.gene005318:intron | 20.0% |
| !!! | TAGATATATTGTTATTTCCA+TGG | - | chr1.1:62357044-62357063 | MS.gene005318:intron | 20.0% |
| !!! | TATTATATTGCTGTGATTTT+AGG | - | chr1.1:62357423-62357442 | MS.gene005318:intron | 20.0% |
| !!! | TGGTATGTATGTTTTTTATT+AGG | - | chr1.1:62358106-62358125 | MS.gene005318:intron | 20.0% |
| !!! | TTTACTTGAGTTTTAATTCA+GGG | + | chr1.1:62358371-62358390 | None:intergenic | 20.0% |
| ! | AAAACTACTTTCTGATCTTT+AGG | + | chr1.1:62355305-62355324 | None:intergenic | 25.0% |
| ! | AAATCACCTTAAAAATTGGA+GGG | - | chr1.1:62356576-62356595 | MS.gene005318:intron | 25.0% |
| ! | AACAAAAAGGGAAATAAATG+GGG | - | chr1.1:62356606-62356625 | MS.gene005318:intron | 25.0% |
| ! | AACAGAAGACTTCAAAATTA+AGG | + | chr1.1:62356276-62356295 | None:intergenic | 25.0% |
| ! | ACACCAAAAATATGTAAAAC+AGG | + | chr1.1:62357502-62357521 | None:intergenic | 25.0% |
| ! | AGATGTAAGATTACTTTGTT+TGG | - | chr1.1:62357074-62357093 | MS.gene005318:CDS | 25.0% |
| ! | AGTGATATATACTAGTCATA+AGG | - | chr1.1:62356245-62356264 | MS.gene005318:intron | 25.0% |
| ! | ATGTGGTAATTAAGTAATGA+GGG | + | chr1.1:62359030-62359049 | None:intergenic | 25.0% |
| ! | CAAAAATAAAGAATCAATGG+AGG | - | chr1.1:62355527-62355546 | MS.gene005318:intron | 25.0% |
| ! | CAAACAAAAAGGGAAATAAA+TGG | - | chr1.1:62356604-62356623 | MS.gene005318:intron | 25.0% |
| ! | CAGAAATACAGCATATATAA+TGG | + | chr1.1:62357771-62357790 | None:intergenic | 25.0% |
| ! | GTGATATATACTAGTCATAA+GGG | - | chr1.1:62356246-62356265 | MS.gene005318:intron | 25.0% |
| ! | TAAATCACCTTAAAAATTGG+AGG | - | chr1.1:62356575-62356594 | MS.gene005318:intron | 25.0% |
| ! | TCAAAAGATTTCAAAAAGTG+TGG | + | chr1.1:62358161-62358180 | None:intergenic | 25.0% |
| ! | TCACAGCAATATAATAAAAC+TGG | + | chr1.1:62357419-62357438 | None:intergenic | 25.0% |
| ! | TGCTAAAATAATGATCTGTT+GGG | + | chr1.1:62354993-62355012 | None:intergenic | 25.0% |
| ! | TGGCAAAAATAAAGAATCAA+TGG | - | chr1.1:62355524-62355543 | MS.gene005318:intron | 25.0% |
| ! | TTATCCAACCAATCAAATTT+GGG | - | chr1.1:62358431-62358450 | MS.gene005318:intron | 25.0% |
| ! | TTGCTAAAATAATGATCTGT+TGG | + | chr1.1:62354994-62355013 | None:intergenic | 25.0% |
| ! | TTTATCCAACCAATCAAATT+TGG | - | chr1.1:62358430-62358449 | MS.gene005318:intron | 25.0% |
| ! | TTTCAAACAGAAGAAGTTTA+AGG | - | chr1.1:62355106-62355125 | MS.gene005318:intron | 25.0% |
| !! | AATATTTTCGGTAATTCATG+GGG | + | chr1.1:62357844-62357863 | None:intergenic | 25.0% |
| !! | AATTTGTTCATTCGAAACTT+TGG | + | chr1.1:62356423-62356442 | None:intergenic | 25.0% |
| !! | ATAAAACTGGCAAAAGTTTT+AGG | + | chr1.1:62357406-62357425 | None:intergenic | 25.0% |
| !! | GAATATTTTCGGTAATTCAT+GGG | + | chr1.1:62357845-62357864 | None:intergenic | 25.0% |
| !! | TAAAACTGGCAAAAGTTTTA+GGG | + | chr1.1:62357405-62357424 | None:intergenic | 25.0% |
| !! | TGAATATTTTCGGTAATTCA+TGG | + | chr1.1:62357846-62357865 | None:intergenic | 25.0% |
| !! | TGGCGCAAAATTTAAATTTT+AGG | - | chr1.1:62355865-62355884 | MS.gene005318:intron | 25.0% |
| !! | TGTCCTGTTTTACATATTTT+TGG | - | chr1.1:62357496-62357515 | MS.gene005318:intron | 25.0% |
| !! | TTGATTGGTTGGATAAAATA+TGG | + | chr1.1:62358427-62358446 | None:intergenic | 25.0% |
| !! | TTGGTTTAGAGGAATATTTT+GGG | - | chr1.1:62356139-62356158 | MS.gene005318:CDS | 25.0% |
| !!! | ATTGGTTTAGAGGAATATTT+TGG | - | chr1.1:62356138-62356157 | MS.gene005318:intron | 25.0% |
| !!! | GAAACAATTTTTTTATCCAC+AGG | + | chr1.1:62358579-62358598 | None:intergenic | 25.0% |
| !!! | GAAGTTTTAAAGTAAAAGCA+TGG | - | chr1.1:62358759-62358778 | MS.gene005318:intron | 25.0% |
| !!! | GGAACATAACATTTAACTTT+TGG | - | chr1.1:62359074-62359093 | MS.gene005318:intron | 25.0% |
| !!! | GTTTACTTGAGTTTTAATTC+AGG | + | chr1.1:62358372-62358391 | None:intergenic | 25.0% |
| !!! | TCTATTTTTGTTTTCGTGTT+AGG | - | chr1.1:62357810-62357829 | MS.gene005318:intron | 25.0% |
| !!! | TGATAACGAATTTTCTCTTT+TGG | - | chr1.1:62357984-62358003 | MS.gene005318:intron | 25.0% |
| !!! | TTATTTGGCTCTCTTTTTTT+TGG | - | chr1.1:62359209-62359228 | MS.gene005318:intron | 25.0% |
| !!! | TTTTAAAATTCCTTTTGTCC+AGG | - | chr1.1:62356838-62356857 | MS.gene005318:CDS | 25.0% |
| AAAATCTCAGCATATTCCAT+CGG | + | chr1.1:62359341-62359360 | None:intergenic | 30.0% | |
| AAAATGACACAAGTCAAACA+AGG | + | chr1.1:62358904-62358923 | None:intergenic | 30.0% | |
| AACATAATCAAACTTAAGGC+CGG | + | chr1.1:62357119-62357138 | None:intergenic | 30.0% | |
| AACGAGGACAGAATATAAAT+TGG | - | chr1.1:62358818-62358837 | MS.gene005318:intron | 30.0% | |
| AAGAAACACTGTAGAAAAAG+TGG | - | chr1.1:62356889-62356908 | MS.gene005318:CDS | 30.0% | |
| AAGCTGATGTTTAACAACAT+TGG | - | chr1.1:62356120-62356139 | MS.gene005318:intron | 30.0% | |
| AATCACCTTAAAAATTGGAG+GGG | - | chr1.1:62356577-62356596 | MS.gene005318:intron | 30.0% | |
| ACGAGGACAGAATATAAATT+GGG | - | chr1.1:62358819-62358838 | MS.gene005318:intron | 30.0% | |
| ACTTACTGTCATGTGTTAAT+TGG | - | chr1.1:62355327-62355346 | MS.gene005318:intron | 30.0% | |
| AGAAACACTGTAGAAAAAGT+GGG | - | chr1.1:62356890-62356909 | MS.gene005318:CDS | 30.0% | |
| AGGTTTCATGAAACATGTTT+AGG | - | chr1.1:62358189-62358208 | MS.gene005318:intron | 30.0% | |
| ATGACTATAATAAGCCAAAC+CGG | - | chr1.1:62358695-62358714 | MS.gene005318:intron | 30.0% | |
| ATGCTTTATGTAGAATTTCC+TGG | + | chr1.1:62356859-62356878 | None:intergenic | 30.0% | |
| ATGTAAAACAGGACAATGAA+CGG | + | chr1.1:62357491-62357510 | None:intergenic | 30.0% | |
| ATGTTGTTAAACATCAGCTT+TGG | + | chr1.1:62356120-62356139 | None:intergenic | 30.0% | |
| ATTACCCTGTAATATACAGA+TGG | + | chr1.1:62355081-62355100 | None:intergenic | 30.0% | |
| ATTACGATCACATCAAATCT+CGG | + | chr1.1:62358062-62358081 | None:intergenic | 30.0% | |
| ATTATTACATGACTACTGGA+AGG | - | chr1.1:62355758-62355777 | MS.gene005318:intron | 30.0% | |
| ATTGTGCATCCTTATCAATA+AGG | - | chr1.1:62358951-62358970 | MS.gene005318:CDS | 30.0% | |
| CAATCCATCTGTATATTACA+GGG | - | chr1.1:62355074-62355093 | MS.gene005318:intron | 30.0% | |
| CACATAGTACTAAAAAGTCA+GGG | - | chr1.1:62356960-62356979 | MS.gene005318:intron | 30.0% | |
| CATGTGGTAATTAAGTAATG+AGG | + | chr1.1:62359031-62359050 | None:intergenic | 30.0% | |
| CATTCTTTCCCAAATTTGAT+TGG | + | chr1.1:62358442-62358461 | None:intergenic | 30.0% | |
| CTAAAGAAATGATATTGGGT+GGG | - | chr1.1:62354938-62354957 | MS.gene005318:intron | 30.0% | |
| CTGTATTATTACATGACTAC+TGG | - | chr1.1:62355754-62355773 | MS.gene005318:intron | 30.0% | |
| CTTAGATTTAGTAGTTAGGA+TGG | - | chr1.1:62355978-62355997 | MS.gene005318:CDS | 30.0% | |
| GAGAAATCATAAAACTAAGC+CGG | - | chr1.1:62357535-62357554 | MS.gene005318:intron | 30.0% | |
| GATGTCTTAAAGCAAGATTT+GGG | - | chr1.1:62355945-62355964 | MS.gene005318:intron | 30.0% | |
| GATTATGTTGATACTTGTCA+GGG | - | chr1.1:62357130-62357149 | MS.gene005318:CDS | 30.0% | |
| GGAAATAAATGGGGATTTAA+TGG | - | chr1.1:62356615-62356634 | MS.gene005318:intron | 30.0% | |
| GGAACTAGTTGTTAGTTATA+TGG | - | chr1.1:62358019-62358038 | MS.gene005318:intron | 30.0% | |
| GTGAAAACAACTTTGTAACT+AGG | + | chr1.1:62358623-62358642 | None:intergenic | 30.0% | |
| TCAATCCATCTGTATATTAC+AGG | - | chr1.1:62355073-62355092 | MS.gene005318:intron | 30.0% | |
| TCACATAGTACTAAAAAGTC+AGG | - | chr1.1:62356959-62356978 | MS.gene005318:intron | 30.0% | |
| TCCAACAGCAAATATATACA+AGG | + | chr1.1:62358645-62358664 | None:intergenic | 30.0% | |
| TCTAAAGAAATGATATTGGG+TGG | - | chr1.1:62354937-62354956 | MS.gene005318:intron | 30.0% | |
| TGAAGAAAGGAATAAGAAAG+AGG | - | chr1.1:62358213-62358232 | MS.gene005318:intron | 30.0% | |
| TGAATGAATGACACATTTCT+TGG | - | chr1.1:62358731-62358750 | MS.gene005318:intron | 30.0% | |
| TGATGTCTTAAAGCAAGATT+TGG | - | chr1.1:62355944-62355963 | MS.gene005318:intron | 30.0% | |
| TGATTATGTTGATACTTGTC+AGG | - | chr1.1:62357129-62357148 | MS.gene005318:CDS | 30.0% | |
| TGTATGCAATTATGTACTGA+TGG | + | chr1.1:62355896-62355915 | None:intergenic | 30.0% | |
| TTAGAGCCATGTTACATAAA+GGG | + | chr1.1:62354922-62354941 | None:intergenic | 30.0% | |
| TTCTTGACTTCTTGATTGTT+AGG | + | chr1.1:62355681-62355700 | None:intergenic | 30.0% | |
| ! | AAAGCAAGATTTGGGATTAA+AGG | - | chr1.1:62355953-62355972 | MS.gene005318:intron | 30.0% |
| ! | AACTCAAGTAAACTCAGTTT+TGG | - | chr1.1:62358379-62358398 | MS.gene005318:CDS | 30.0% |
| ! | AAGCAAGATTTGGGATTAAA+GGG | - | chr1.1:62355954-62355973 | MS.gene005318:intron | 30.0% |
| ! | AAGCTATTGATTGCTATTCA+AGG | - | chr1.1:62355129-62355148 | MS.gene005318:intron | 30.0% |
| ! | ATTTTTACAAGACAATAGGG+AGG | - | chr1.1:62358843-62358862 | MS.gene005318:intron | 30.0% |
| ! | CATTAGAAAGACTTTAGAGA+CGG | - | chr1.1:62356016-62356035 | MS.gene005318:CDS | 30.0% |
| ! | GGATTGTTAGGATCTATTTT+AGG | - | chr1.1:62356369-62356388 | MS.gene005318:CDS | 30.0% |
| ! | GGGATTTTTACAAGACAATA+GGG | - | chr1.1:62358840-62358859 | MS.gene005318:intron | 30.0% |
| ! | GTATATATCACTCGTTTTCA+TGG | + | chr1.1:62356237-62356256 | None:intergenic | 30.0% |
| ! | GTTACATAAAAGCATACTCT+CGG | - | chr1.1:62355478-62355497 | MS.gene005318:intron | 30.0% |
| ! | TTTAGAGCCATGTTACATAA+AGG | + | chr1.1:62354923-62354942 | None:intergenic | 30.0% |
| !! | AAAACTGGCAAAAGTTTTAG+GGG | + | chr1.1:62357404-62357423 | None:intergenic | 30.0% |
| !! | ACCTTGTATATATTTGCTGT+TGG | - | chr1.1:62358641-62358660 | MS.gene005318:intron | 30.0% |
| !! | CTTTTCATGCTGTTGTTATT+TGG | - | chr1.1:62359194-62359213 | MS.gene005318:intron | 30.0% |
| !! | GGCTCTAAAGAAATGATATT+GGG | - | chr1.1:62354934-62354953 | MS.gene005318:intron | 30.0% |
| !! | GTCCAAGATAGAATTTTGAT+CGG | + | chr1.1:62359373-62359392 | None:intergenic | 30.0% |
| !! | GTTTAACAACATTGGTTTAG+AGG | - | chr1.1:62356128-62356147 | MS.gene005318:intron | 30.0% |
| !! | TGGCTCTAAAGAAATGATAT+TGG | - | chr1.1:62354933-62354952 | MS.gene005318:intron | 30.0% |
| !! | TTGCCTTCTTAGCTTTATAT+GGG | + | chr1.1:62355204-62355223 | None:intergenic | 30.0% |
| AAACTCGGCATCTGTAATTT+AGG | + | chr1.1:62355643-62355662 | None:intergenic | 35.0% | |
| AACAGAACCACAATACACAA+TGG | + | chr1.1:62357348-62357367 | None:intergenic | 35.0% | |
| AACAGCTCAATCCAATTAGA+TGG | + | chr1.1:62359260-62359279 | None:intergenic | 35.0% | |
| AACATGTTTAGGCTGAAGAA+AGG | - | chr1.1:62358200-62358219 | MS.gene005318:intron | 35.0% | |
| AACTACAGCTTATCAGTTTG+AGG | - | chr1.1:62357640-62357659 | MS.gene005318:intron | 35.0% | |
| AACTCGGCATCTGTAATTTA+GGG | + | chr1.1:62355642-62355661 | None:intergenic | 35.0% | |
| AAGACCAAAATAGTTAGGAG+AGG | + | chr1.1:62354848-62354867 | None:intergenic | 35.0% | |
| AAGTCCGAGACAAAAGTTAA+TGG | - | chr1.1:62356914-62356933 | MS.gene005318:intron | 35.0% | |
| ACATTACTAGACGATAAGAG+TGG | + | chr1.1:62357321-62357340 | None:intergenic | 35.0% | |
| AGAACAGTTAACAACACACT+AGG | + | chr1.1:62356768-62356787 | None:intergenic | 35.0% | |
| AGACCAAAATAGTTAGGAGA+GGG | + | chr1.1:62354847-62354866 | None:intergenic | 35.0% | |
| ATGACACTTACTTTATGACC+AGG | - | chr1.1:62356719-62356738 | MS.gene005318:intron | 35.0% | |
| CAAAATGTGTACTATCTTCC+TGG | - | chr1.1:62358468-62358487 | MS.gene005318:intron | 35.0% | |
| CAAACAAGGATGATATGTCA+TGG | + | chr1.1:62358890-62358909 | None:intergenic | 35.0% | |
| CGAGGACAGAATATAAATTG+GGG | - | chr1.1:62358820-62358839 | MS.gene005318:intron | 35.0% | |
| CTCCGATCAAAATTCTATCT+TGG | - | chr1.1:62359368-62359387 | MS.gene005318:CDS | 35.0% | |
| CTTTCCCAAATTTGATTGGT+TGG | + | chr1.1:62358438-62358457 | None:intergenic | 35.0% | |
| GGAATGTCTTCATTTAACAC+TGG | + | chr1.1:62358869-62358888 | None:intergenic | 35.0% | |
| GTAACGATCATCGAGATTTA+AGG | + | chr1.1:62355463-62355482 | None:intergenic | 35.0% | |
| GTGAAACCCTTTATGTAACA+TGG | - | chr1.1:62354913-62354932 | MS.gene005318:intron | 35.0% | |
| TACAGTGTTTCTTAGTGCTT+TGG | + | chr1.1:62356882-62356901 | None:intergenic | 35.0% | |
| TACGCAAGACCAAAATAGTT+AGG | + | chr1.1:62354853-62354872 | None:intergenic | 35.0% | |
| TAGTACTATGTGAAACAGAG+TGG | + | chr1.1:62356952-62356971 | None:intergenic | 35.0% | |
| TCAAACTGATAAGCTGTAGT+TGG | + | chr1.1:62357641-62357660 | None:intergenic | 35.0% | |
| TCAACAGATGCTTTCATTTC+CGG | + | chr1.1:62357557-62357576 | None:intergenic | 35.0% | |
| TGAAGCTCATCGTCAAATAA+AGG | - | chr1.1:62356988-62357007 | MS.gene005318:intron | 35.0% | |
| TGTAAAACAGGACAATGAAC+GGG | + | chr1.1:62357490-62357509 | None:intergenic | 35.0% | |
| TGTAGAATTTCCTGGACAAA+AGG | + | chr1.1:62356851-62356870 | None:intergenic | 35.0% | |
| TGTAGTTCCATTGTGTATTG+TGG | - | chr1.1:62357338-62357357 | MS.gene005318:intron | 35.0% | |
| TTTATCCACAGGGAAAATGT+GGG | + | chr1.1:62358568-62358587 | None:intergenic | 35.0% | |
| TTTGCAGGCTTGTCTATTAA+AGG | - | chr1.1:62357694-62357713 | MS.gene005318:intron | 35.0% | |
| TTTGTAAGCAAGTCACTAAG+AGG | + | chr1.1:62359160-62359179 | None:intergenic | 35.0% | |
| ! | AAATTTTGCGCCAACTCTAA+CGG | + | chr1.1:62355858-62355877 | None:intergenic | 35.0% |
| ! | AACATATTTGCTGCTGGATA+AGG | - | chr1.1:62356489-62356508 | MS.gene005318:CDS | 35.0% |
| ! | ACTAGTAGGAAATGGTTCTA+AGG | - | chr1.1:62357240-62357259 | MS.gene005318:intron | 35.0% |
| ! | AGCAAGATTTGGGATTAAAG+GGG | - | chr1.1:62355955-62355974 | MS.gene005318:intron | 35.0% |
| ! | AGCGACTGACAGAATAATTT+TGG | - | chr1.1:62356455-62356474 | MS.gene005318:CDS | 35.0% |
| ! | CGACTGACAGAATAATTTTG+GGG | - | chr1.1:62356457-62356476 | MS.gene005318:CDS | 35.0% |
| ! | CTAGAAAACATATTTGCTGC+TGG | - | chr1.1:62356483-62356502 | MS.gene005318:CDS | 35.0% |
| ! | GACATCAACTCGTTTGATTT+AGG | + | chr1.1:62355931-62355950 | None:intergenic | 35.0% |
| ! | GATGGAATATGCTGAGATTT+TGG | - | chr1.1:62359340-62359359 | MS.gene005318:CDS | 35.0% |
| ! | GCGACTGACAGAATAATTTT+GGG | - | chr1.1:62356456-62356475 | MS.gene005318:CDS | 35.0% |
| ! | GCTTCCATTAACTTTTGTCT+CGG | + | chr1.1:62356921-62356940 | None:intergenic | 35.0% |
| ! | GGGGATTTTTACAAGACAAT+AGG | - | chr1.1:62358839-62358858 | MS.gene005318:intron | 35.0% |
| ! | TTTCCCTCTCCTAACTATTT+TGG | - | chr1.1:62354841-62354860 | MS.gene005318:intron | 35.0% |
| ! | TTTTATCCACAGGGAAAATG+TGG | + | chr1.1:62358569-62358588 | None:intergenic | 35.0% |
| !! | CAAGATAGAATTTTGATCGG+AGG | + | chr1.1:62359370-62359389 | None:intergenic | 35.0% |
| !! | CAAGTAAACTCAGTTTTGGT+GGG | - | chr1.1:62358383-62358402 | MS.gene005318:CDS | 35.0% |
| !! | CTTGCCTTCTTAGCTTTATA+TGG | + | chr1.1:62355205-62355224 | None:intergenic | 35.0% |
| !! | GTGGGGCAAATTAATTTGTT+TGG | - | chr1.1:62354878-62354897 | MS.gene005318:intron | 35.0% |
| !! | TCAAGTAAACTCAGTTTTGG+TGG | - | chr1.1:62358382-62358401 | MS.gene005318:CDS | 35.0% |
| !!! | CCTTATGGGGCAATTTTTTA+GGG | - | chr1.1:62356314-62356333 | MS.gene005318:intron | 35.0% |
| !!! | TATTTTGGTCTTGCGTAACA+GGG | - | chr1.1:62354856-62354875 | MS.gene005318:intron | 35.0% |
| AACTAGCAGGGTAGAAGATA+AGG | + | chr1.1:62357875-62357894 | None:intergenic | 40.0% | |
| AACTGATAAGCTGTAGTTGG+TGG | + | chr1.1:62357638-62357657 | None:intergenic | 40.0% | |
| ACTATCTTCCTGGCAGTAAT+AGG | - | chr1.1:62358478-62358497 | MS.gene005318:intron | 40.0% | |
| AGAAGAGCTCCAACCAAAAT+TGG | - | chr1.1:62358988-62359007 | MS.gene005318:intron | 40.0% | |
| AGATCCTAACAATCCTTTCC+TGG | + | chr1.1:62356364-62356383 | None:intergenic | 40.0% | |
| AGGATACAAAATCTGCAAGC+AGG | - | chr1.1:62357209-62357228 | MS.gene005318:intron | 40.0% | |
| ATAATAAGCCAAACCGGTTG+TGG | - | chr1.1:62358701-62358720 | MS.gene005318:intron | 40.0% | |
| ATACTTGTCAGGGTAATGAG+CGG | - | chr1.1:62357140-62357159 | MS.gene005318:CDS | 40.0% | |
| ATATTGGGTGGGAAATCAGA+TGG | - | chr1.1:62354949-62354968 | MS.gene005318:intron | 40.0% | |
| ATCAAGAGTGGTTCTTTAGC+AGG | + | chr1.1:62357172-62357191 | None:intergenic | 40.0% | |
| ATCTTCAGCATCACACAAGA+CGG | + | chr1.1:62355050-62355069 | None:intergenic | 40.0% | |
| ATGACTACTGGAAGGAAACA+TGG | - | chr1.1:62355766-62355785 | MS.gene005318:intron | 40.0% | |
| ATGGGGATTTAATGGTCTGT+TGG | - | chr1.1:62356623-62356642 | MS.gene005318:intron | 40.0% | |
| ATGTGTCAGCAGATTTCAAG+AGG | - | chr1.1:62355416-62355435 | MS.gene005318:intron | 40.0% | |
| ATTGTTAGGTTCCAACCTCA+TGG | + | chr1.1:62355667-62355686 | None:intergenic | 40.0% | |
| ATTTGACGATGAGCTTCAGT+TGG | + | chr1.1:62356986-62357005 | None:intergenic | 40.0% | |
| CCCTAAAAAATTGCCCCATA+AGG | + | chr1.1:62356317-62356336 | None:intergenic | 40.0% | |
| CTACCTCCATTATGGAGTTT+GGG | - | chr1.1:62358528-62358547 | MS.gene005318:CDS | 40.0% | |
| CTGTTTGTCAGCATAGATTC+AGG | - | chr1.1:62356291-62356310 | MS.gene005318:intron | 40.0% | |
| CTTGAAATCTGCTGACACAT+AGG | + | chr1.1:62355416-62355435 | None:intergenic | 40.0% | |
| CTTTGTAACTAGGTAGTCAG+AGG | + | chr1.1:62358613-62358632 | None:intergenic | 40.0% | |
| GCAACGTCTAGAAAAGAACT+TGG | - | chr1.1:62355504-62355523 | MS.gene005318:intron | 40.0% | |
| GCTCTTTACGAGCATTAGTA+AGG | + | chr1.1:62355360-62355379 | None:intergenic | 40.0% | |
| GGGGCTTAGATTTAGTAGTT+AGG | - | chr1.1:62355974-62355993 | MS.gene005318:CDS | 40.0% | |
| GGGTATATCAAAAGCCACTA+TGG | + | chr1.1:62356649-62356668 | None:intergenic | 40.0% | |
| GGGTTTGCAAGAAAATGCAT+CGG | - | chr1.1:62356514-62356533 | MS.gene005318:intron | 40.0% | |
| GTAAAACAGGACAATGAACG+GGG | + | chr1.1:62357489-62357508 | None:intergenic | 40.0% | |
| TAAAGAACCACTCTTGATGG+AGG | - | chr1.1:62357174-62357193 | MS.gene005318:CDS | 40.0% | |
| TCCAATTAGATGGACAACTC+TGG | + | chr1.1:62359250-62359269 | None:intergenic | 40.0% | |
| TCTTACATCTGTCTCATCCA+TGG | + | chr1.1:62357064-62357083 | None:intergenic | 40.0% | |
| TGCTAAAGAACCACTCTTGA+TGG | - | chr1.1:62357171-62357190 | MS.gene005318:CDS | 40.0% | |
| TGCTGTAGCCTATGCAAATA+GGG | - | chr1.1:62355172-62355191 | MS.gene005318:intron | 40.0% | |
| TGGCCCATATAAAGCTAAGA+AGG | - | chr1.1:62355198-62355217 | MS.gene005318:intron | 40.0% | |
| TTATAATGCAAGCCACAGCT+TGG | - | chr1.1:62357267-62357286 | MS.gene005318:intron | 40.0% | |
| TTCCTGGCAGTAATAGGAAA+AGG | - | chr1.1:62358484-62358503 | MS.gene005318:intron | 40.0% | |
| TTTGCAAGAAAATGCATCGG+TGG | - | chr1.1:62356517-62356536 | MS.gene005318:intron | 40.0% | |
| ! | ACTCAAGGACTAGTAGGAAA+TGG | - | chr1.1:62357232-62357251 | MS.gene005318:intron | 40.0% |
| ! | ACTTGATGATCTCAACTAGC+AGG | + | chr1.1:62357888-62357907 | None:intergenic | 40.0% |
| ! | AGCATAGATTCAGGCCTTAT+GGG | - | chr1.1:62356300-62356319 | MS.gene005318:intron | 40.0% |
| ! | CTTATCAGTTTGAGGTCTCT+TGG | - | chr1.1:62357648-62357667 | MS.gene005318:intron | 40.0% |
| ! | CTTGATGATCTCAACTAGCA+GGG | + | chr1.1:62357887-62357906 | None:intergenic | 40.0% |
| ! | GCTGTATTTCTGCTGTTGAA+TGG | - | chr1.1:62357779-62357798 | MS.gene005318:intron | 40.0% |
| ! | TATTTGCTGCTGGATAAGGA+CGG | - | chr1.1:62356493-62356512 | MS.gene005318:CDS | 40.0% |
| ! | TGTTTTTCCTCACTTCTCTC+TGG | - | chr1.1:62356801-62356820 | MS.gene005318:CDS | 40.0% |
| !! | AATGCTCGTAAAGAGCACTT+TGG | - | chr1.1:62355364-62355383 | MS.gene005318:intron | 40.0% |
| !! | GCCACGAGCATTGAAAATAA+GGG | - | chr1.1:62355828-62355847 | MS.gene005318:intron | 40.0% |
| !! | GTAGGAAATGGTTCTAAGGA+AGG | - | chr1.1:62357244-62357263 | MS.gene005318:intron | 40.0% |
| !!! | ACCCTTATTTTCAATGCTCG+TGG | + | chr1.1:62355832-62355851 | None:intergenic | 40.0% |
| !!! | CTATTTTGGTCTTGCGTAAC+AGG | - | chr1.1:62354855-62354874 | MS.gene005318:intron | 40.0% |
| !!! | GCCTTATGGGGCAATTTTTT+AGG | - | chr1.1:62356313-62356332 | MS.gene005318:intron | 40.0% |
| !!! | GGCAATTTTTTAGGGAAACC+TGG | - | chr1.1:62356322-62356341 | MS.gene005318:intron | 40.0% |
| AAAGGTCAGCTGCAATGCAT+AGG | - | chr1.1:62358502-62358521 | MS.gene005318:intron | 45.0% | |
| AAATCTGCAAGCAGGACTCA+AGG | - | chr1.1:62357217-62357236 | MS.gene005318:intron | 45.0% | |
| AACCTGCCCAAACTCCATAA+TGG | + | chr1.1:62358537-62358556 | None:intergenic | 45.0% | |
| AATCTGCTGACACATAGGTG+AGG | + | chr1.1:62355411-62355430 | None:intergenic | 45.0% | |
| AGCCTATGCAAATAGGGCAA+TGG | - | chr1.1:62355178-62355197 | MS.gene005318:intron | 45.0% | |
| ATACCATCCTTAGCAGCTGA+TGG | + | chr1.1:62358092-62358111 | None:intergenic | 45.0% | |
| ATAGGTGGCTACCTCCATTA+TGG | - | chr1.1:62358520-62358539 | MS.gene005318:CDS | 45.0% | |
| ATTTGCATAGGCTACAGCAG+TGG | + | chr1.1:62355171-62355190 | None:intergenic | 45.0% | |
| CACATCAAATCTCGGTACCT+TGG | + | chr1.1:62358054-62358073 | None:intergenic | 45.0% | |
| CACCTTAAAAATTGGAGGGG+CGG | - | chr1.1:62356580-62356599 | MS.gene005318:intron | 45.0% | |
| CAGCATAGATTCAGGCCTTA+TGG | - | chr1.1:62356299-62356318 | MS.gene005318:intron | 45.0% | |
| CATGCCAGGAAAGGATTGTT+AGG | - | chr1.1:62356357-62356376 | MS.gene005318:CDS | 45.0% | |
| CATTCACCCATATCCACAAC+CGG | + | chr1.1:62358717-62358736 | None:intergenic | 45.0% | |
| CCTGACCAATTTGTGAAGGA+CGG | + | chr1.1:62356094-62356113 | None:intergenic | 45.0% | |
| CTCGTACAGTGACTTAGCAT+CGG | + | chr1.1:62355712-62355731 | None:intergenic | 45.0% | |
| CTGCTGTAGCCTATGCAAAT+AGG | - | chr1.1:62355171-62355190 | MS.gene005318:intron | 45.0% | |
| GATGGAGGAGATCACTAGTA+AGG | - | chr1.1:62357189-62357208 | MS.gene005318:intron | 45.0% | |
| GCAACCTGACCAATTTGTGA+AGG | + | chr1.1:62356098-62356117 | None:intergenic | 45.0% | |
| GCCAGAGTTGTCCATCTAAT+TGG | - | chr1.1:62359246-62359265 | MS.gene005318:CDS | 45.0% | |
| GCTACCTCCATTATGGAGTT+TGG | - | chr1.1:62358527-62358546 | MS.gene005318:CDS | 45.0% | |
| GGTGTGGAGAATGGATCAAA+AGG | - | chr1.1:62354671-62354690 | MS.gene005318:CDS | 45.0% | |
| TAAGGGTTGACCGTTAGAGT+TGG | - | chr1.1:62355845-62355864 | MS.gene005318:intron | 45.0% | |
| TAATGGTCTGTTGGCCATAG+TGG | - | chr1.1:62356632-62356651 | MS.gene005318:intron | 45.0% | |
| TACAAAGCTCATGCCAGGAA+AGG | - | chr1.1:62356348-62356367 | MS.gene005318:intron | 45.0% | |
| TCTTTCTCAGAAGCAGCATC+AGG | + | chr1.1:62354806-62354825 | None:intergenic | 45.0% | |
| TGATCTGTTGGGACACATGT+CGG | + | chr1.1:62354982-62355001 | None:intergenic | 45.0% | |
| TGCTAAGTCACTGTACGAGA+AGG | - | chr1.1:62355713-62355732 | MS.gene005318:intron | 45.0% | |
| TGTTCCTCATGCATAGTGTC+CGG | - | chr1.1:62357097-62357116 | MS.gene005318:CDS | 45.0% | |
| TTCCAACCTCATGGCAAACT+CGG | + | chr1.1:62355658-62355677 | None:intergenic | 45.0% | |
| TTCTGGTGATCTTGCTTTGC+AGG | - | chr1.1:62357679-62357698 | MS.gene005318:intron | 45.0% | |
| TTGGTTGGAGCTCTTCTCAT+AGG | + | chr1.1:62358985-62359004 | None:intergenic | 45.0% | |
| TTTATGACCAGGCTTCACGA+CGG | - | chr1.1:62356730-62356749 | MS.gene005318:intron | 45.0% | |
| TTTGCATAGGCTACAGCAGT+GGG | + | chr1.1:62355170-62355189 | None:intergenic | 45.0% | |
| ! | AAAATTGGCCTGATAGGTGG+GGG | - | chr1.1:62359003-62359022 | MS.gene005318:intron | 45.0% |
| ! | AAGACTTTAGAGACGGAACG+AGG | - | chr1.1:62356023-62356042 | MS.gene005318:CDS | 45.0% |
| ! | ACCAAAATTGGCCTGATAGG+TGG | - | chr1.1:62359000-62359019 | MS.gene005318:intron | 45.0% |
| ! | AGACTTTAGAGACGGAACGA+GGG | - | chr1.1:62356024-62356043 | MS.gene005318:CDS | 45.0% |
| ! | AGTTTGAGGTCTCTTGGAGA+GGG | - | chr1.1:62357654-62357673 | MS.gene005318:intron | 45.0% |
| ! | ATTTGCTGCTGGATAAGGAC+GGG | - | chr1.1:62356494-62356513 | MS.gene005318:CDS | 45.0% |
| ! | CAAAATTGGCCTGATAGGTG+GGG | - | chr1.1:62359002-62359021 | MS.gene005318:intron | 45.0% |
| ! | CAGTGTTATTGATGCCGTCA+AGG | - | chr1.1:62356063-62356082 | MS.gene005318:intron | 45.0% |
| ! | CCAAAATTGGCCTGATAGGT+GGG | - | chr1.1:62359001-62359020 | MS.gene005318:intron | 45.0% |
| ! | CCAACCAAAATTGGCCTGAT+AGG | - | chr1.1:62358997-62359016 | MS.gene005318:intron | 45.0% |
| ! | GAATGAAGTTTTCTGCGCTG+AGG | - | chr1.1:62359310-62359329 | MS.gene005318:CDS | 45.0% |
| ! | GACCTTTTCCTATTACTGCC+AGG | + | chr1.1:62358489-62358508 | None:intergenic | 45.0% |
| ! | GCATAGATTCAGGCCTTATG+GGG | - | chr1.1:62356301-62356320 | MS.gene005318:intron | 45.0% |
| !! | CCTATCAGGCCAATTTTGGT+TGG | + | chr1.1:62359000-62359019 | None:intergenic | 45.0% |
| !! | GCTCGAGAGCCTTATTGATA+AGG | + | chr1.1:62358963-62358982 | None:intergenic | 45.0% |
| !! | GGCCACGAGCATTGAAAATA+AGG | - | chr1.1:62355827-62355846 | MS.gene005318:intron | 45.0% |
| !! | GGTGGTGGAAAGAATTAGAG+TGG | - | chr1.1:62356535-62356554 | MS.gene005318:intron | 45.0% |
| ACAGGACAATGAACGGGGAT+AGG | + | chr1.1:62357484-62357503 | None:intergenic | 50.0% | |
| ACCCATATCCACAACCGGTT+TGG | + | chr1.1:62358712-62358731 | None:intergenic | 50.0% | |
| AGCCAAACCGGTTGTGGATA+TGG | - | chr1.1:62358707-62358726 | MS.gene005318:intron | 50.0% | |
| AGCCATTGCTGCCTGAATTG+AGG | + | chr1.1:62356681-62356700 | None:intergenic | 50.0% | |
| CAGCAGATTTCAAGAGGCTG+AGG | - | chr1.1:62355422-62355441 | MS.gene005318:intron | 50.0% | |
| CATCCTTAGCAGCTGATGGA+AGG | + | chr1.1:62358088-62358107 | None:intergenic | 50.0% | |
| CCGTCCTTCACAAATTGGTC+AGG | - | chr1.1:62356091-62356110 | MS.gene005318:intron | 50.0% | |
| CTCCATTATGGAGTTTGGGC+AGG | - | chr1.1:62358532-62358551 | MS.gene005318:CDS | 50.0% | |
| CTGCAGATTTGCGCAAGATC+TGG | - | chr1.1:62359288-62359307 | MS.gene005318:CDS | 50.0% | |
| CTGCCCAAACTCCATAATGG+AGG | + | chr1.1:62358534-62358553 | None:intergenic | 50.0% | |
| CTTCCATCAGCTGCTAAGGA+TGG | - | chr1.1:62358086-62358105 | MS.gene005318:intron | 50.0% | |
| GACCAATTTGTGAAGGACGG+TGG | + | chr1.1:62356091-62356110 | None:intergenic | 50.0% | |
| GAGGGAAAAAAGCTCCTACC+AGG | + | chr1.1:62354829-62354848 | None:intergenic | 50.0% | |
| GAGGGGCGGTCAAACAAAAA+GGG | - | chr1.1:62356594-62356613 | MS.gene005318:intron | 50.0% | |
| GAGTCGTGTGAGTAGCAGTT+TGG | - | chr1.1:62354766-62354785 | MS.gene005318:intron | 50.0% | |
| GCCAAACCGGTTGTGGATAT+GGG | - | chr1.1:62358708-62358727 | MS.gene005318:intron | 50.0% | |
| GCCATTGCTGCCTGAATTGA+GGG | + | chr1.1:62356680-62356699 | None:intergenic | 50.0% | |
| GCTTAACCTGTTCCAAGCTG+TGG | + | chr1.1:62357282-62357301 | None:intergenic | 50.0% | |
| GGCCATTGCCCTATTTGCAT+AGG | + | chr1.1:62355183-62355202 | None:intergenic | 50.0% | |
| GTGATCTCCTCCATCAAGAG+TGG | + | chr1.1:62357184-62357203 | None:intergenic | 50.0% | |
| GTTCTTTGCAGCTTCAGCCA+TGG | + | chr1.1:62357609-62357628 | None:intergenic | 50.0% | |
| TTATGACCAGGCTTCACGAC+GGG | - | chr1.1:62356731-62356750 | MS.gene005318:intron | 50.0% | |
| TTGTGCACCAGAGAGAAGTG+AGG | + | chr1.1:62356811-62356830 | None:intergenic | 50.0% | |
| ! | AAATTGGCCTGATAGGTGGG+GGG | - | chr1.1:62359004-62359023 | MS.gene005318:intron | 50.0% |
| ! | AGCAGGACTCAAGGACTAGT+AGG | - | chr1.1:62357226-62357245 | MS.gene005318:intron | 50.0% |
| ! | ATGCACCCACATTTTCCCTG+TGG | - | chr1.1:62358560-62358579 | MS.gene005318:CDS | 50.0% |
| ! | CAGTTTGAGGTCTCTTGGAG+AGG | - | chr1.1:62357653-62357672 | MS.gene005318:intron | 50.0% |
| ! | CCCACCTATCAGGCCAATTT+TGG | + | chr1.1:62359004-62359023 | None:intergenic | 50.0% |
| ! | CCTGAATTGAGGGCATGAGA+CGG | + | chr1.1:62356670-62356689 | None:intergenic | 50.0% |
| ! | CTCTTTTGGCAGCGAAGACA+TGG | - | chr1.1:62357998-62358017 | MS.gene005318:intron | 50.0% |
| ! | CTGAATTGAGGGCATGAGAC+GGG | + | chr1.1:62356669-62356688 | None:intergenic | 50.0% |
| ! | GACCGCCCCTCCAATTTTTA+AGG | + | chr1.1:62356585-62356604 | None:intergenic | 50.0% |
| ! | GCAAGAAAATGCATCGGTGG+TGG | - | chr1.1:62356520-62356539 | MS.gene005318:intron | 50.0% |
| ! | GCTTCTGAGAAAGACCTGGT+AGG | - | chr1.1:62354812-62354831 | MS.gene005318:intron | 50.0% |
| ! | GGCATGAGCTTTGTAACACC+AGG | + | chr1.1:62356343-62356362 | None:intergenic | 50.0% |
| ! | GGTGTTACAAAGCTCATGCC+AGG | - | chr1.1:62356343-62356362 | MS.gene005318:intron | 50.0% |
| ! | GTCTCTTGGAGAGGGTTTTC+TGG | - | chr1.1:62357662-62357681 | MS.gene005318:intron | 50.0% |
| ! | TGCTGCTTCTGAGAAAGACC+TGG | - | chr1.1:62354808-62354827 | MS.gene005318:intron | 50.0% |
| !! | TTGGTCTTGCGTAACAGGGT+GGG | - | chr1.1:62354860-62354879 | MS.gene005318:intron | 50.0% |
| !! | TTTGGTCTTGCGTAACAGGG+TGG | - | chr1.1:62354859-62354878 | MS.gene005318:intron | 50.0% |
| AAGGCCGGACACTATGCATG+AGG | + | chr1.1:62357104-62357123 | None:intergenic | 55.0% | |
| CAGATGCCGAGTTTGCCATG+AGG | - | chr1.1:62355649-62355668 | MS.gene005318:intron | 55.0% | |
| CCGTCTCATGCCCTCAATTC+AGG | - | chr1.1:62356667-62356686 | MS.gene005318:intron | 55.0% | |
| CGCCACCGTCCTTCACAAAT+TGG | - | chr1.1:62356086-62356105 | MS.gene005318:intron | 55.0% | |
| GCCCTCAATTCAGGCAGCAA+TGG | - | chr1.1:62356676-62356695 | MS.gene005318:intron | 55.0% | |
| GCGAGCACGGAAGATTCATG+TGG | + | chr1.1:62359047-62359066 | None:intergenic | 55.0% | |
| GGAGGGGCGGTCAAACAAAA+AGG | - | chr1.1:62356593-62356612 | MS.gene005318:intron | 55.0% | |
| GGCTGAGGATGACTGTACAG+AGG | - | chr1.1:62355437-62355456 | MS.gene005318:intron | 55.0% | |
| GGTCAGCTGCAATGCATAGG+TGG | - | chr1.1:62358505-62358524 | MS.gene005318:intron | 55.0% | |
| GTGCCTTCCATCAGCTGCTA+AGG | - | chr1.1:62358082-62358101 | MS.gene005318:intron | 55.0% | |
| TCAAGCTGCTTCTCGAGCCA+TGG | - | chr1.1:62357589-62357608 | MS.gene005318:intron | 55.0% | |
| TGCAAGCCACAGCTTGGAAC+AGG | - | chr1.1:62357273-62357292 | MS.gene005318:intron | 55.0% | |
| TGCCGAGTTTGCCATGAGGT+TGG | - | chr1.1:62355653-62355672 | MS.gene005318:intron | 55.0% | |
| TGTTCCACGTTGAGCGAGCA+CGG | + | chr1.1:62359060-62359079 | None:intergenic | 55.0% | |
| ! | TGGTCTTGCGTAACAGGGTG+GGG | - | chr1.1:62354861-62354880 | MS.gene005318:intron | 55.0% |
| !! | TTGGGACACATGTCGGCTCA+TGG | + | chr1.1:62354975-62354994 | None:intergenic | 55.0% |
| AGGCTTCACGACGGGACACT+AGG | - | chr1.1:62356739-62356758 | MS.gene005318:intron | 60.0% | |
| GGCTACAGCAGTGGGTGAGA+AGG | + | chr1.1:62355162-62355181 | None:intergenic | 60.0% | |
| TAGTGTCCCGTCGTGAAGCC+TGG | + | chr1.1:62356740-62356759 | None:intergenic | 60.0% | |
| TCTTCCGTGCTCGCTCAACG+TGG | - | chr1.1:62359053-62359072 | MS.gene005318:intron | 60.0% | |
| ATGAGGGCCCCCCACCTATC+AGG | + | chr1.1:62359014-62359033 | None:intergenic | 65.0% | |
| CTGCGCTGAGGCAACTCCGA+TGG | - | chr1.1:62359322-62359341 | MS.gene005318:CDS | 65.0% | |
| GAAGGACGGTGGCGCCTTGA+CGG | + | chr1.1:62356080-62356099 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 62354668 | 62359397 | 62354668 | ID=MS.gene005318 |
| chr1.1 | mRNA | 62354668 | 62359397 | 62354668 | ID=MS.gene005318.t1;Parent=MS.gene005318 |
| chr1.1 | exon | 62359236 | 62359397 | 62359236 | ID=MS.gene005318.t1.exon1;Parent=MS.gene005318.t1 |
| chr1.1 | CDS | 62359236 | 62359397 | 62359236 | ID=cds.MS.gene005318.t1;Parent=MS.gene005318.t1 |
| chr1.1 | exon | 62358846 | 62358970 | 62358846 | ID=MS.gene005318.t1.exon2;Parent=MS.gene005318.t1 |
| chr1.1 | CDS | 62358846 | 62358970 | 62358846 | ID=cds.MS.gene005318.t1;Parent=MS.gene005318.t1 |
| chr1.1 | exon | 62358516 | 62358637 | 62358516 | ID=MS.gene005318.t1.exon3;Parent=MS.gene005318.t1 |
| chr1.1 | CDS | 62358516 | 62358637 | 62358516 | ID=cds.MS.gene005318.t1;Parent=MS.gene005318.t1 |
| chr1.1 | exon | 62358331 | 62358413 | 62358331 | ID=MS.gene005318.t1.exon4;Parent=MS.gene005318.t1 |
| chr1.1 | CDS | 62358331 | 62358413 | 62358331 | ID=cds.MS.gene005318.t1;Parent=MS.gene005318.t1 |
| chr1.1 | exon | 62357056 | 62357205 | 62357056 | ID=MS.gene005318.t1.exon5;Parent=MS.gene005318.t1 |
| chr1.1 | CDS | 62357056 | 62357205 | 62357056 | ID=cds.MS.gene005318.t1;Parent=MS.gene005318.t1 |
| chr1.1 | exon | 62356771 | 62356914 | 62356771 | ID=MS.gene005318.t1.exon6;Parent=MS.gene005318.t1 |
| chr1.1 | CDS | 62356771 | 62356914 | 62356771 | ID=cds.MS.gene005318.t1;Parent=MS.gene005318.t1 |
| chr1.1 | exon | 62356350 | 62356529 | 62356350 | ID=MS.gene005318.t1.exon7;Parent=MS.gene005318.t1 |
| chr1.1 | CDS | 62356350 | 62356529 | 62356350 | ID=cds.MS.gene005318.t1;Parent=MS.gene005318.t1 |
| chr1.1 | exon | 62356139 | 62356233 | 62356139 | ID=MS.gene005318.t1.exon8;Parent=MS.gene005318.t1 |
| chr1.1 | CDS | 62356139 | 62356233 | 62356139 | ID=cds.MS.gene005318.t1;Parent=MS.gene005318.t1 |
| chr1.1 | exon | 62355958 | 62356055 | 62355958 | ID=MS.gene005318.t1.exon9;Parent=MS.gene005318.t1 |
| chr1.1 | CDS | 62355958 | 62356055 | 62355958 | ID=cds.MS.gene005318.t1;Parent=MS.gene005318.t1 |
| chr1.1 | exon | 62354668 | 62354771 | 62354668 | ID=MS.gene005318.t1.exon10;Parent=MS.gene005318.t1 |
| chr1.1 | CDS | 62354668 | 62354771 | 62354668 | ID=cds.MS.gene005318.t1;Parent=MS.gene005318.t1 |
| Gene Sequence |
| Protein sequence |
