Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006231.t1 | XP_024627140.1 | 98.6 | 704 | 9 | 1 | 1 | 703 | 1 | 704 | 0.00E+00 | 1234.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006231.t1 | P51819 | 94.6 | 703 | 38 | 0 | 1 | 703 | 1 | 703 | 0.0e+00 | 1192.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006231.t1 | A0A2K3MY81 | 97.0 | 703 | 21 | 0 | 1 | 703 | 1 | 703 | 0.0e+00 | 1225.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006231.t1 | MTR_1g099840 | 96.307 | 704 | 10 | 2 | 1 | 703 | 1 | 689 | 0.0 | 1363 |
| MS.gene006231.t1 | MTR_6g452990 | 95.136 | 699 | 33 | 1 | 6 | 703 | 1 | 699 | 0.0 | 1270 |
| MS.gene006231.t1 | MTR_5g096430 | 87.143 | 700 | 87 | 2 | 6 | 703 | 1 | 699 | 0.0 | 1146 |
| MS.gene006231.t1 | MTR_5g096460 | 87.143 | 700 | 87 | 2 | 6 | 703 | 1 | 699 | 0.0 | 1146 |
| MS.gene006231.t1 | MTR_1g025430 | 49.364 | 707 | 312 | 8 | 8 | 675 | 76 | 775 | 0.0 | 656 |
| MS.gene006231.t1 | MTR_5g097320 | 47.337 | 676 | 336 | 10 | 9 | 673 | 89 | 755 | 0.0 | 596 |
| MS.gene006231.t1 | MTR_0009s0390 | 44.915 | 708 | 363 | 10 | 9 | 702 | 81 | 775 | 0.0 | 575 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006231.t1 | AT5G52640 | 89.286 | 700 | 73 | 2 | 6 | 703 | 1 | 700 | 0.0 | 1206 |
| MS.gene006231.t1 | AT5G56000 | 84.429 | 700 | 106 | 3 | 6 | 703 | 1 | 699 | 0.0 | 1134 |
| MS.gene006231.t1 | AT5G56030 | 85.286 | 700 | 100 | 3 | 6 | 703 | 1 | 699 | 0.0 | 1128 |
| MS.gene006231.t1 | AT5G56010 | 85.143 | 700 | 101 | 3 | 6 | 703 | 1 | 699 | 0.0 | 1126 |
| MS.gene006231.t1 | AT5G56030 | 81.893 | 729 | 100 | 4 | 6 | 703 | 1 | 728 | 0.0 | 1114 |
| MS.gene006231.t1 | AT4G24190 | 49.929 | 705 | 309 | 8 | 8 | 675 | 75 | 772 | 0.0 | 647 |
| MS.gene006231.t1 | AT4G24190 | 49.929 | 705 | 309 | 8 | 8 | 675 | 75 | 772 | 0.0 | 647 |
| MS.gene006231.t1 | AT3G07770 | 46.824 | 677 | 340 | 10 | 9 | 674 | 94 | 761 | 0.0 | 603 |
| MS.gene006231.t1 | AT3G07770 | 46.824 | 677 | 340 | 10 | 9 | 674 | 94 | 761 | 0.0 | 603 |
| MS.gene006231.t1 | AT3G07770 | 46.824 | 677 | 340 | 10 | 9 | 674 | 94 | 761 | 0.0 | 603 |
| MS.gene006231.t1 | AT2G04030 | 47.710 | 677 | 327 | 10 | 9 | 673 | 76 | 737 | 0.0 | 603 |
| MS.gene006231.t1 | AT2G04030 | 47.259 | 675 | 330 | 10 | 9 | 673 | 76 | 734 | 0.0 | 595 |
Find 165 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTCCAAGAATTTGAAAT+TGG | 0.171299 | 1.1:-71797811 | MS.gene006231:CDS |
| CTTGGAGAAACTTAAGAAAA+AGG | 0.178941 | 1.1:-71797610 | MS.gene006231:CDS |
| TTCAGATTTGGTGAACAATT+TGG | 0.182629 | 1.1:-71799394 | MS.gene006231:intron |
| TTCCATCATACTCCTTTAAT+TGG | 0.201211 | 1.1:+71797538 | None:intergenic |
| CAAATCAAACGGTGCCCTTT+TGG | 0.205259 | 1.1:+71798100 | None:intergenic |
| TGCTGAAACCTTTGCATTCC+AGG | 0.239703 | 1.1:-71799879 | MS.gene006231:CDS |
| GATACCCAATTTCAAATTCT+TGG | 0.247197 | 1.1:+71797806 | None:intergenic |
| GTCTCCCAATACCTCCTTGA+TGG | 0.280128 | 1.1:+71797407 | None:intergenic |
| TTAAATTAATTTACCTGCTT+TGG | 0.287566 | 1.1:+71799542 | None:intergenic |
| AAGATGGAGGAGGTTGATTA+AGG | 0.291854 | 1.1:-71796967 | None:intergenic |
| GTTAGCATGATTGGTCAATT+TGG | 0.295958 | 1.1:-71799312 | MS.gene006231:CDS |
| TGTTTGGTGACTGGTGAATA+TGG | 0.317819 | 1.1:-71797336 | MS.gene006231:CDS |
| CTTGGAGGAGAGAAGGATTA+AGG | 0.334725 | 1.1:-71798489 | MS.gene006231:CDS |
| TAGTCAGAACAGAGCTAAAT+TGG | 0.338612 | 1.1:-71797775 | MS.gene006231:CDS |
| GTATGCTGTTGGCCAATTAA+AGG | 0.342228 | 1.1:-71797550 | MS.gene006231:CDS |
| TGTGGAGAATTCTCCATTCT+TGG | 0.342762 | 1.1:-71797628 | MS.gene006231:CDS |
| CAACCCTGACAATGGCATTA+TGG | 0.344688 | 1.1:-71797220 | MS.gene006231:CDS |
| CATCAGACTTGTTCCTGATA+AGG | 0.348448 | 1.1:-71799607 | MS.gene006231:CDS |
| TCAGATTTGGTGAACAATTT+GGG | 0.350972 | 1.1:-71799393 | MS.gene006231:intron |
| ATGATGATGAACAATACATT+TGG | 0.355356 | 1.1:-71799230 | MS.gene006231:CDS |
| CAATGAGATTGCTGAGAATA+AGG | 0.366299 | 1.1:-71797859 | MS.gene006231:CDS |
| CGTTTGATTTGTTTGATACT+AGG | 0.369680 | 1.1:-71798088 | MS.gene006231:CDS |
| AATTCGATTTGAAAGCTTAA+CGG | 0.373408 | 1.1:-71799664 | MS.gene006231:CDS |
| TGTGAGGAGGGTGTTCATTA+TGG | 0.374488 | 1.1:-71798039 | MS.gene006231:CDS |
| CAGGACCATCAAGGAGGTAT+TGG | 0.383987 | 1.1:-71797412 | MS.gene006231:CDS |
| GTGGATCTTTCACTGTTACT+AGG | 0.388088 | 1.1:-71799194 | MS.gene006231:CDS |
| CGCATTTCGATTTCTGCCAT+TGG | 0.388240 | 1.1:+71799905 | None:intergenic |
| TTCTCAGTCCAAAGGTAGAT+AGG | 0.389672 | 1.1:+71798431 | None:intergenic |
| GAGACAGCACTCTTAACTTC+TGG | 0.389999 | 1.1:-71797126 | MS.gene006231:CDS |
| ATTCTACCAGCAAACATGTT+TGG | 0.393274 | 1.1:+71797087 | None:intergenic |
| TTCTCCAAGAATTTGAAATT+GGG | 0.395764 | 1.1:-71797810 | MS.gene006231:CDS |
| TTCTTAAGTTTCTCCAAGAA+TGG | 0.397153 | 1.1:+71797615 | None:intergenic |
| TTAGCTACCCTATCTACCTT+TGG | 0.400749 | 1.1:-71798439 | MS.gene006231:CDS |
| TGTGGATTCTCCATGTTGTT+TGG | 0.400821 | 1.1:-71797352 | MS.gene006231:CDS |
| TCGTCCTTGGTAATTTCCTC+TGG | 0.402183 | 1.1:+71798230 | None:intergenic |
| GTCTGGTACAAAGGAATTCA+TGG | 0.410673 | 1.1:-71799358 | MS.gene006231:CDS |
| ATAAGAGCATAACTAATGAT+TGG | 0.418044 | 1.1:-71798193 | MS.gene006231:CDS |
| CTATTCTCTTTGTTCCCAAA+AGG | 0.422208 | 1.1:-71798115 | MS.gene006231:CDS |
| TGTGTTATAGTTGGAATACT+TGG | 0.431020 | 1.1:-71798507 | MS.gene006231:intron |
| TGGATCTTTCACTGTTACTA+GGG | 0.435649 | 1.1:-71799193 | MS.gene006231:CDS |
| CTTGTTCCTCAAGGAAGATC+AGG | 0.435854 | 1.1:-71799130 | MS.gene006231:intron |
| TTCATGGAGGCATTACAAGC+TGG | 0.436032 | 1.1:-71799342 | MS.gene006231:CDS |
| TCCTCCATAATGCCATTGTC+AGG | 0.437528 | 1.1:+71797216 | None:intergenic |
| GAAGCTGGTATCTGCTACAA+AGG | 0.437907 | 1.1:-71797514 | MS.gene006231:CDS |
| TCTCCATGTTGTTTGGTGAC+TGG | 0.440901 | 1.1:-71797345 | MS.gene006231:CDS |
| TGATGATGAACAATACATTT+GGG | 0.441950 | 1.1:-71799229 | MS.gene006231:CDS |
| GATGATCCAAACATGTTTGC+TGG | 0.447088 | 1.1:-71797093 | MS.gene006231:CDS |
| AGGACCATCAAGGAGGTATT+GGG | 0.450304 | 1.1:-71797411 | MS.gene006231:CDS |
| AGAGAAGAAGAAATCATTTG+AGG | 0.455191 | 1.1:-71797442 | MS.gene006231:CDS |
| GGCATTGGCATGACCAAAGC+AGG | 0.455988 | 1.1:-71799555 | MS.gene006231:intron |
| TTGGGTACTATTGCGAGGTC+TGG | 0.456286 | 1.1:-71799375 | MS.gene006231:CDS |
| GGGGCTGATGTTAGCATGAT+TGG | 0.460557 | 1.1:-71799321 | MS.gene006231:CDS |
| TAAGAGCATAACTAATGATT+GGG | 0.461224 | 1.1:-71798192 | MS.gene006231:CDS |
| ACACTATCAATCATTGATAG+TGG | 0.464512 | 1.1:-71799576 | MS.gene006231:CDS |
| TGAGGATGTAGATGAAGAGA+AGG | 0.466876 | 1.1:-71798342 | MS.gene006231:CDS |
| GGAGGGTCAACTAGAGTTCA+AGG | 0.468530 | 1.1:-71798138 | MS.gene006231:CDS |
| TATTGCGAGGTCTGGTACAA+AGG | 0.469662 | 1.1:-71799367 | MS.gene006231:CDS |
| TGGAATACTTGGAGGAGAGA+AGG | 0.475060 | 1.1:-71798496 | MS.gene006231:CDS |
| CAGAATGAAAGAGGGTCAAA+AGG | 0.480856 | 1.1:-71797685 | MS.gene006231:CDS |
| CTGGTATCTGCTACAAAGGA+AGG | 0.485817 | 1.1:-71797510 | MS.gene006231:CDS |
| AATTCACAGGATGTTGAAGC+TGG | 0.485968 | 1.1:-71797067 | MS.gene006231:CDS |
| TATTCTCTTTGTTCCCAAAA+GGG | 0.486731 | 1.1:-71798114 | MS.gene006231:CDS |
| TGTTAAGCATTTCTCTGTGG+AGG | 0.488508 | 1.1:-71798156 | MS.gene006231:CDS |
| TCAATCATTGATAGTGGCAT+TGG | 0.489484 | 1.1:-71799570 | MS.gene006231:CDS |
| GGAAAAGGAAGGAGATGTTG+AGG | 0.493255 | 1.1:-71798360 | MS.gene006231:CDS |
| GTTATAGTTGGAATACTTGG+AGG | 0.493605 | 1.1:-71798504 | MS.gene006231:intron |
| GAAGTTGGATGAGGAGAGTG+AGG | 0.493740 | 1.1:-71797484 | MS.gene006231:CDS |
| GGAGTATGATGGAAAGAAGC+TGG | 0.494717 | 1.1:-71797529 | MS.gene006231:CDS |
| CTCTGTTCTGACTATCCTCA+TGG | 0.496112 | 1.1:+71797784 | None:intergenic |
| TGATGATGAGACTGAGAAGT+TGG | 0.496914 | 1.1:+71799846 | None:intergenic |
| TGATGAACCTAAGAAGGAAA+AGG | 0.503008 | 1.1:-71798375 | MS.gene006231:CDS |
| TGAGTACCTTGGATTTGTCA+AGG | 0.505185 | 1.1:-71797994 | MS.gene006231:CDS |
| GGAAGGGTTGAAGTTGGATG+AGG | 0.506953 | 1.1:-71797493 | MS.gene006231:CDS |
| AGATGAAGACATGCCTCCAC+TGG | 0.507205 | 1.1:-71797013 | MS.gene006231:CDS |
| GATGTCAATGGTGAACAACT+TGG | 0.511608 | 1.1:-71799171 | MS.gene006231:CDS |
| TCATGGAGGCATTACAAGCT+GGG | 0.511949 | 1.1:-71799341 | MS.gene006231:CDS |
| TTGACAAATCCAAGGTACTC+AGG | 0.512897 | 1.1:+71797996 | None:intergenic |
| TCAACAAGCAGAAACCAATC+TGG | 0.514259 | 1.1:-71798262 | MS.gene006231:CDS |
| ATGATTGGTCAATTTGGTGT+TGG | 0.514305 | 1.1:-71799306 | MS.gene006231:CDS |
| ACAAGTCTGATGAAAAGCTC+TGG | 0.517102 | 1.1:+71799618 | None:intergenic |
| AAGCAACACAAGGTCCTTCA+CGG | 0.522281 | 1.1:+71797155 | None:intergenic |
| CTAGTATCAAACAAATCAAA+CGG | 0.523583 | 1.1:+71798089 | None:intergenic |
| TAATGATTGGGAAGAACACT+TGG | 0.527807 | 1.1:-71798180 | MS.gene006231:CDS |
| TCTGGCTTACGCAACCAGAT+TGG | 0.530199 | 1.1:+71798248 | None:intergenic |
| GAATGAAGCATACTCGTCCT+TGG | 0.530562 | 1.1:+71798217 | None:intergenic |
| GAGTACCTTGGATTTGTCAA+GGG | 0.535864 | 1.1:-71797993 | MS.gene006231:CDS |
| AAGGATATTTACTATATCAC+TGG | 0.536155 | 1.1:-71797666 | MS.gene006231:CDS |
| TGGATTTGTCAAGGGTGTAG+TGG | 0.539035 | 1.1:-71797985 | MS.gene006231:CDS |
| GTTAAGCATTTCTCTGTGGA+GGG | 0.539665 | 1.1:-71798155 | MS.gene006231:CDS |
| ATTGTCAGGGTTGATCTCCA+TGG | 0.542460 | 1.1:+71797230 | None:intergenic |
| AGATGAGATGACAAGCTTGA+AGG | 0.542488 | 1.1:-71797718 | MS.gene006231:CDS |
| ACTGTTACTAGGGATGTCAA+TGG | 0.543110 | 1.1:-71799183 | MS.gene006231:CDS |
| GAGCTCATCCCTGAGTACCT+TGG | 0.550986 | 1.1:-71798005 | MS.gene006231:CDS |
| TGAGGATGATGAACCTAAGA+AGG | 0.554886 | 1.1:-71798381 | MS.gene006231:CDS |
| AGTTGTCTCGGATAGGATTG+TGG | 0.557675 | 1.1:-71797370 | MS.gene006231:CDS |
| TTATGGAGGAGCTGAGAAAG+AGG | 0.558690 | 1.1:-71797203 | MS.gene006231:CDS |
| TGAAGAGAGCAAGATGGAGG+AGG | 0.560190 | 1.1:-71796977 | MS.gene006231:CDS |
| CTATGTTACCAGAATGAAAG+AGG | 0.562239 | 1.1:-71797694 | MS.gene006231:CDS |
| TCTCAGTCCAAAGGTAGATA+GGG | 0.562769 | 1.1:+71798432 | None:intergenic |
| AGGCGCTGAAGAGAGCAAGA+TGG | 0.563156 | 1.1:-71796983 | MS.gene006231:CDS |
| AGTTGAGAAAGTAGTTGTCT+CGG | 0.565740 | 1.1:-71797382 | MS.gene006231:CDS |
| TTGAGAGATAGCAGCATGAG+TGG | 0.568101 | 1.1:-71797273 | MS.gene006231:CDS |
| TAAGATTACCTTGTTCCTCA+AGG | 0.569189 | 1.1:-71799139 | MS.gene006231:CDS |
| ATTCACAGGATGTTGAAGCT+GGG | 0.569221 | 1.1:-71797066 | MS.gene006231:CDS |
| TACAAAGGAAGGGTTGAAGT+TGG | 0.570527 | 1.1:-71797499 | MS.gene006231:CDS |
| CTGATCTTCCTTGAGGAACA+AGG | 0.572292 | 1.1:+71799131 | None:intergenic |
| CAAACATGTTTGGATCATCC+AGG | 0.572455 | 1.1:+71797097 | None:intergenic |
| GGCCAATTAAAGGAGTATGA+TGG | 0.574049 | 1.1:-71797540 | MS.gene006231:CDS |
| GAAGTTGGTTGATCTCAGCC+TGG | 0.575545 | 1.1:+71799861 | None:intergenic |
| TGGTGACTGGTGAATATGGA+TGG | 0.578088 | 1.1:-71797332 | MS.gene006231:CDS |
| AATCATTTGAGGATCTATGC+AGG | 0.578345 | 1.1:-71797431 | MS.gene006231:CDS |
| TGGTGAGAGTAAGAAGGCTG+TGG | 0.582985 | 1.1:-71797646 | MS.gene006231:CDS |
| TGTTTGCTGGTAGAATTCAC+AGG | 0.586334 | 1.1:-71797080 | MS.gene006231:CDS |
| TTAAGGAGGTTTCTCATGAG+TGG | 0.588342 | 1.1:-71798292 | MS.gene006231:CDS |
| TATCACTGGTGAGAGTAAGA+AGG | 0.590152 | 1.1:-71797652 | MS.gene006231:CDS |
| AATGGTGAACAACTTGGAAG+AGG | 0.590183 | 1.1:-71799165 | MS.gene006231:CDS |
| AGAAAGTAGTTGTCTCGGAT+AGG | 0.591723 | 1.1:-71797377 | MS.gene006231:CDS |
| GGCTGTTAAGCATTTCTCTG+TGG | 0.595552 | 1.1:-71798159 | MS.gene006231:CDS |
| ATGCCTCCACTGGAGGAAGT+AGG | 0.596007 | 1.1:-71797003 | MS.gene006231:CDS |
| GGATCTATGCAGGACCATCA+AGG | 0.596813 | 1.1:-71797421 | MS.gene006231:CDS |
| AGCATTGATGAGGAAGAGAC+TGG | 0.596838 | 1.1:-71797039 | MS.gene006231:CDS |
| CGCTGAAGAGAGCAAGATGG+AGG | 0.597067 | 1.1:-71796980 | MS.gene006231:CDS |
| TACATTTGGGAATCACAAGC+TGG | 0.598338 | 1.1:-71799216 | MS.gene006231:CDS |
| GACTGAGAAGACTACTGAGA+AGG | 0.602168 | 1.1:-71798417 | MS.gene006231:CDS |
| TTCACAGGATGTTGAAGCTG+GGG | 0.602382 | 1.1:-71797065 | MS.gene006231:CDS |
| ATATGGATGGAGTGCAAACA+TGG | 0.604123 | 1.1:-71797319 | MS.gene006231:CDS |
| CAGTAGTCTTCTCAGTCCAA+AGG | 0.604801 | 1.1:+71798423 | None:intergenic |
| TGACAAATCCAAGGTACTCA+GGG | 0.611848 | 1.1:+71797997 | None:intergenic |
| ATATCAAGCTGTATGTGAGG+AGG | 0.615471 | 1.1:-71798052 | MS.gene006231:CDS |
| GATCTCAGCCTGGAATGCAA+AGG | 0.619501 | 1.1:+71799871 | None:intergenic |
| GAAGGAGATCAGTGATGATG+AGG | 0.626522 | 1.1:-71798399 | MS.gene006231:CDS |
| GAACCTAAGAAGGAAAAGGA+AGG | 0.626940 | 1.1:-71798371 | MS.gene006231:CDS |
| TCTCAATGCACTTCTTCACA+AGG | 0.627680 | 1.1:+71797886 | None:intergenic |
| GCGCCTACTTCCTCCAGTGG+AGG | 0.628820 | 1.1:+71797000 | None:intergenic |
| TGGTATCTGCTACAAAGGAA+GGG | 0.629588 | 1.1:-71797509 | MS.gene006231:CDS |
| TATCAAGCTGTATGTGAGGA+GGG | 0.629910 | 1.1:-71798051 | MS.gene006231:CDS |
| TATGGAGGAGCTGAGAAAGA+GGG | 0.630167 | 1.1:-71797202 | MS.gene006231:CDS |
| TCAGCGCCTACTTCCTCCAG+TGG | 0.632812 | 1.1:+71796997 | None:intergenic |
| CATGGAGGCATTACAAGCTG+GGG | 0.633123 | 1.1:-71799340 | MS.gene006231:CDS |
| CCTCCATAATGCCATTGTCA+GGG | 0.633801 | 1.1:+71797217 | None:intergenic |
| TCACCAGTCACCAAACAACA+TGG | 0.634548 | 1.1:+71797342 | None:intergenic |
| ATGGAGATCAACCCTGACAA+TGG | 0.636528 | 1.1:-71797228 | MS.gene006231:CDS |
| CATGTCTAGCAAGAAGACCA+TGG | 0.639969 | 1.1:-71797247 | MS.gene006231:CDS |
| ATTTGGGAATCACAAGCTGG+TGG | 0.641832 | 1.1:-71799213 | MS.gene006231:CDS |
| CCCTGACAATGGCATTATGG+AGG | 0.643069 | 1.1:-71797217 | MS.gene006231:CDS |
| GATGGAGTGCAAACATGGAG+AGG | 0.643902 | 1.1:-71797314 | MS.gene006231:CDS |
| TAAGAATGATAAGTCCGTGA+AGG | 0.645850 | 1.1:-71797169 | MS.gene006231:CDS |
| GCTGGGGCTCAGCATTGATG+AGG | 0.646731 | 1.1:-71797049 | MS.gene006231:CDS |
| CTACACCCTTGACAAATCCA+AGG | 0.647229 | 1.1:+71797988 | None:intergenic |
| GCTATTGACGAGTATGCTGT+TGG | 0.649715 | 1.1:-71797561 | MS.gene006231:CDS |
| TGTATACCTGATCTTCCTTG+AGG | 0.654298 | 1.1:+71799124 | None:intergenic |
| ACAATTTGGGTACTATTGCG+AGG | 0.656937 | 1.1:-71799380 | MS.gene006231:CDS |
| ATCTCACGAGAGATATTGAG+TGG | 0.657230 | 1.1:+71797948 | None:intergenic |
| AATCTGGTTGCGTAAGCCAG+AGG | 0.658174 | 1.1:-71798246 | MS.gene006231:CDS |
| ACAATATCAAGCTGTATGTG+AGG | 0.660885 | 1.1:-71798055 | MS.gene006231:CDS |
| TGAAGACATGCCTCCACTGG+AGG | 0.665463 | 1.1:-71797010 | MS.gene006231:CDS |
| AAACATGGAGAGGATCATGA+AGG | 0.667122 | 1.1:-71797304 | MS.gene006231:CDS |
| TTTGAAATTGGGTATCCATG+AGG | 0.672057 | 1.1:-71797799 | MS.gene006231:CDS |
| TATGTTACCAGAATGAAAGA+GGG | 0.686570 | 1.1:-71797693 | MS.gene006231:CDS |
| TCTCAAACAGAAGCAACACA+AGG | 0.697952 | 1.1:+71797145 | None:intergenic |
| ATTGATGAGGAAGAGACTGG+TGG | 0.705591 | 1.1:-71797036 | MS.gene006231:CDS |
| TAAGCCAGAGGAAATTACCA+AGG | 0.721489 | 1.1:-71798234 | MS.gene006231:CDS |
| CATTGCTGATGAGTTCACGA+AGG | 0.740684 | 1.1:+71799795 | None:intergenic |
| TCTATGCAGGACCATCAAGG+AGG | 0.752495 | 1.1:-71797418 | MS.gene006231:CDS |
| TGGTACAAAGGAATTCATGG+AGG | 0.756490 | 1.1:-71799355 | MS.gene006231:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAGAATTAGAAAAATTT+AGG | + | chr1.1:71797120-71797139 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTTTTTTCATTAC+AGG | - | chr1.1:71797174-71797193 | MS.gene006231:CDS | 10.0% |
| !! | AAAGAAAAAAAAGAAGATTA+AGG | - | chr1.1:71798562-71798581 | MS.gene006231:intron | 15.0% |
| !! | ATTATATGTATCAAAATTCA+AGG | + | chr1.1:71798037-71798056 | None:intergenic | 15.0% |
| !! | CAATAATTTGAGAAATTAAA+TGG | - | chr1.1:71797819-71797838 | MS.gene006231:CDS | 15.0% |
| !! | TGATTTGAATTATTATTAGT+TGG | - | chr1.1:71798161-71798180 | MS.gene006231:CDS | 15.0% |
| !!! | TAAAATTATTTTCTTTCCAA+AGG | + | chr1.1:71797944-71797963 | None:intergenic | 15.0% |
| !!! | TTGGAAAGAAAATAATTTTA+TGG | - | chr1.1:71797944-71797963 | MS.gene006231:CDS | 15.0% |
| !! | AAAATTATACAATACAACCA+TGG | + | chr1.1:71798280-71798299 | None:intergenic | 20.0% |
| !! | ATGAACTTATGACATTATTA+TGG | - | chr1.1:71798198-71798217 | MS.gene006231:CDS | 20.0% |
| !! | GTTTGTAATTCATGTTTAAT+GGG | - | chr1.1:71797439-71797458 | MS.gene006231:CDS | 20.0% |
| !! | TGTTTGTAATTCATGTTTAA+TGG | - | chr1.1:71797438-71797457 | MS.gene006231:CDS | 20.0% |
| !! | TTAAATTAATTTACCTGCTT+TGG | + | chr1.1:71797332-71797351 | None:intergenic | 20.0% |
| ! | AAGGATATTTACTATATCAC+TGG | - | chr1.1:71799205-71799224 | MS.gene006231:CDS | 25.0% |
| ! | CTAGTATCAAACAAATCAAA+CGG | + | chr1.1:71798785-71798804 | None:intergenic | 25.0% |
| ! | GAAAAAAAAGAAGATTAAGG+AGG | - | chr1.1:71798565-71798584 | MS.gene006231:intron | 25.0% |
| ! | GATTCAAACAACAAGAAAAT+TGG | + | chr1.1:71798117-71798136 | None:intergenic | 25.0% |
| ! | TTGGAGAAACTTAAGAAAAA+GGG | - | chr1.1:71799262-71799281 | MS.gene006231:CDS | 25.0% |
| !! | AAATTATCAAAAAGTGTAGC+TGG | + | chr1.1:71798083-71798102 | None:intergenic | 25.0% |
| !! | AATTCGATTTGAAAGCTTAA+CGG | - | chr1.1:71797207-71797226 | MS.gene006231:CDS | 25.0% |
| !! | ATAAGAGCATAACTAATGAT+TGG | - | chr1.1:71798678-71798697 | MS.gene006231:intron | 25.0% |
| !! | ATGATGATGAACAATACATT+TGG | - | chr1.1:71797641-71797660 | MS.gene006231:CDS | 25.0% |
| !! | TAAGAGCATAACTAATGATT+GGG | - | chr1.1:71798679-71798698 | MS.gene006231:intron | 25.0% |
| !! | TGATGATGAACAATACATTT+GGG | - | chr1.1:71797642-71797661 | MS.gene006231:CDS | 25.0% |
| !! | TTCTCCAAGAATTTGAAATT+GGG | - | chr1.1:71799061-71799080 | MS.gene006231:intron | 25.0% |
| !! | TTTCTCCAAGAATTTGAAAT+TGG | - | chr1.1:71799060-71799079 | MS.gene006231:intron | 25.0% |
| !!! | ATAAGATTTTGAAGGTGATT+AGG | - | chr1.1:71798957-71798976 | MS.gene006231:intron | 25.0% |
| !!! | TGATTTATTGACTTTCTTGT+TGG | - | chr1.1:71798338-71798357 | MS.gene006231:CDS | 25.0% |
| !!! | TTGTTTGAATCACTTTTGTT+CGG | - | chr1.1:71798126-71798145 | MS.gene006231:CDS | 25.0% |
| !!! | TTTTTTTTCATTACAGGCTT+TGG | - | chr1.1:71797180-71797199 | MS.gene006231:CDS | 25.0% |
| AATTTAGGAAAAACTCACGT+CGG | + | chr1.1:71797105-71797124 | None:intergenic | 30.0% | |
| ACACTATCAATCATTGATAG+TGG | - | chr1.1:71797295-71797314 | MS.gene006231:CDS | 30.0% | |
| AGAGAAGAAGAAATCATTTG+AGG | - | chr1.1:71799429-71799448 | MS.gene006231:intron | 30.0% | |
| AGATACCATTCTACAAAAAG+TGG | - | chr1.1:71799130-71799149 | MS.gene006231:intron | 30.0% | |
| ATTGACACAAAAGGAAAAGA+GGG | + | chr1.1:71798311-71798330 | None:intergenic | 30.0% | |
| CAAACAACAAGAAAATTGGT+TGG | + | chr1.1:71798113-71798132 | None:intergenic | 30.0% | |
| CATTTGTCTATTGACACAAA+AGG | + | chr1.1:71798320-71798339 | None:intergenic | 30.0% | |
| CTTGGAGAAACTTAAGAAAA+AGG | - | chr1.1:71799261-71799280 | MS.gene006231:CDS | 30.0% | |
| GATACCCAATTTCAAATTCT+TGG | + | chr1.1:71799068-71799087 | None:intergenic | 30.0% | |
| TATGATTCAACACTAACCTT+TGG | - | chr1.1:71797925-71797944 | MS.gene006231:CDS | 30.0% | |
| TATGTTACCAGAATGAAAGA+GGG | - | chr1.1:71799178-71799197 | MS.gene006231:CDS | 30.0% | |
| TATTCTCTTTGTTCCCAAAA+GGG | - | chr1.1:71798757-71798776 | MS.gene006231:intron | 30.0% | |
| TATTGACACAAAAGGAAAAG+AGG | + | chr1.1:71798312-71798331 | None:intergenic | 30.0% | |
| TCTCTAGACTCATAATCATA+TGG | + | chr1.1:71797845-71797864 | None:intergenic | 30.0% | |
| TGTGTTATAGTTGGAATACT+TGG | - | chr1.1:71798364-71798383 | MS.gene006231:CDS | 30.0% | |
| TTCCATCATACTCCTTTAAT+TGG | + | chr1.1:71799336-71799355 | None:intergenic | 30.0% | |
| TTCTTAAGTTTCTCCAAGAA+TGG | + | chr1.1:71799259-71799278 | None:intergenic | 30.0% | |
| ! | GCAACAGAATAAGATTTTGA+AGG | - | chr1.1:71798949-71798968 | MS.gene006231:intron | 30.0% |
| !! | AGTGTTTTGTTATCCTTATC+AGG | + | chr1.1:71797280-71797299 | None:intergenic | 30.0% |
| !! | CGTTTGATTTGTTTGATACT+AGG | - | chr1.1:71798783-71798802 | MS.gene006231:intron | 30.0% |
| !! | TCAGATTTGGTGAACAATTT+GGG | - | chr1.1:71797478-71797497 | MS.gene006231:CDS | 30.0% |
| !! | TTCAGATTTGGTGAACAATT+TGG | - | chr1.1:71797477-71797496 | MS.gene006231:CDS | 30.0% |
| !!! | TGTTGGTTTTGTGTTATAGT+TGG | - | chr1.1:71798355-71798374 | MS.gene006231:CDS | 30.0% |
| AATCATTTGAGGATCTATGC+AGG | - | chr1.1:71799440-71799459 | MS.gene006231:intron | 35.0% | |
| ACAATATCAAGCTGTATGTG+AGG | - | chr1.1:71798816-71798835 | MS.gene006231:intron | 35.0% | |
| ACTTAAGAAAAAGGGCTATG+AGG | - | chr1.1:71799270-71799289 | MS.gene006231:CDS | 35.0% | |
| AGTTGAGAAAGTAGTTGTCT+CGG | - | chr1.1:71799489-71799508 | MS.gene006231:intron | 35.0% | |
| ATTCTACCAGCAAACATGTT+TGG | + | chr1.1:71799787-71799806 | None:intergenic | 35.0% | |
| CAATGAGATTGCTGAGAATA+AGG | - | chr1.1:71799012-71799031 | MS.gene006231:intron | 35.0% | |
| CTATGTTACCAGAATGAAAG+AGG | - | chr1.1:71799177-71799196 | MS.gene006231:CDS | 35.0% | |
| CTATTCTCTTTGTTCCCAAA+AGG | - | chr1.1:71798756-71798775 | MS.gene006231:intron | 35.0% | |
| GAATCTTGATGTGATAACCA+TGG | - | chr1.1:71798260-71798279 | MS.gene006231:CDS | 35.0% | |
| GTTATAGTTGGAATACTTGG+AGG | - | chr1.1:71798367-71798386 | MS.gene006231:CDS | 35.0% | |
| TAAGAATGATAAGTCCGTGA+AGG | - | chr1.1:71799702-71799721 | MS.gene006231:intron | 35.0% | |
| TAAGATTACCTTGTTCCTCA+AGG | - | chr1.1:71797732-71797751 | MS.gene006231:CDS | 35.0% | |
| TAATGATTGGGAAGAACACT+TGG | - | chr1.1:71798691-71798710 | MS.gene006231:intron | 35.0% | |
| TAGTCAGAACAGAGCTAAAT+TGG | - | chr1.1:71799096-71799115 | MS.gene006231:intron | 35.0% | |
| TATGAGTCTAGAGACTAAGT+TGG | - | chr1.1:71797851-71797870 | MS.gene006231:CDS | 35.0% | |
| TGATGAACCTAAGAAGGAAA+AGG | - | chr1.1:71798496-71798515 | MS.gene006231:CDS | 35.0% | |
| TGGATCTTTCACTGTTACTA+GGG | - | chr1.1:71797678-71797697 | MS.gene006231:CDS | 35.0% | |
| ! | GTTAGCATGATTGGTCAATT+TGG | - | chr1.1:71797559-71797578 | MS.gene006231:CDS | 35.0% |
| ! | GTTGCTGATTGTTTCAGATT+TGG | - | chr1.1:71797465-71797484 | MS.gene006231:CDS | 35.0% |
| ! | TCTCTAGTGTGCATCTATTT+TGG | - | chr1.1:71797999-71798018 | MS.gene006231:CDS | 35.0% |
| ! | TTTGAAATTGGGTATCCATG+AGG | - | chr1.1:71799072-71799091 | MS.gene006231:intron | 35.0% |
| !! | ATCACTTTTGTTCGGTCATT+TGG | - | chr1.1:71798134-71798153 | MS.gene006231:CDS | 35.0% |
| !! | ATGATTGGTCAATTTGGTGT+TGG | - | chr1.1:71797565-71797584 | MS.gene006231:CDS | 35.0% |
| !! | CAACACTTTTTACAGCAACA+AGG | - | chr1.1:71797046-71797065 | MS.gene006231:CDS | 35.0% |
| !! | TCAATCATTGATAGTGGCAT+TGG | - | chr1.1:71797301-71797320 | MS.gene006231:CDS | 35.0% |
| !!! | CATCTCCACTTTTTGTAGAA+TGG | + | chr1.1:71799138-71799157 | None:intergenic | 35.0% |
| AAACATGGAGAGGATCATGA+AGG | - | chr1.1:71799567-71799586 | MS.gene006231:CDS | 40.0% | |
| AATGGTGAACAACTTGGAAG+AGG | - | chr1.1:71797706-71797725 | MS.gene006231:CDS | 40.0% | |
| AATTCACAGGATGTTGAAGC+TGG | - | chr1.1:71799804-71799823 | MS.gene006231:CDS | 40.0% | |
| ACAAGTCTGATGAAAAGCTC+TGG | + | chr1.1:71797256-71797275 | None:intergenic | 40.0% | |
| ACAATTTGGGTACTATTGCG+AGG | - | chr1.1:71797491-71797510 | MS.gene006231:CDS | 40.0% | |
| ACTGTTACTAGGGATGTCAA+TGG | - | chr1.1:71797688-71797707 | MS.gene006231:CDS | 40.0% | |
| AGAAAGTAGTTGTCTCGGAT+AGG | - | chr1.1:71799494-71799513 | MS.gene006231:intron | 40.0% | |
| AGATGAGATGACAAGCTTGA+AGG | - | chr1.1:71799153-71799172 | MS.gene006231:CDS | 40.0% | |
| ATATCAAGCTGTATGTGAGG+AGG | - | chr1.1:71798819-71798838 | MS.gene006231:intron | 40.0% | |
| ATATGGATGGAGTGCAAACA+TGG | - | chr1.1:71799552-71799571 | MS.gene006231:intron | 40.0% | |
| ATCTCACGAGAGATATTGAG+TGG | + | chr1.1:71798926-71798945 | None:intergenic | 40.0% | |
| ATGGCGCGTAAGATTTGAAA+CGG | - | chr1.1:71798217-71798236 | MS.gene006231:CDS | 40.0% | |
| ATTCACAGGATGTTGAAGCT+GGG | - | chr1.1:71799805-71799824 | MS.gene006231:CDS | 40.0% | |
| CAAACATGTTTGGATCATCC+AGG | + | chr1.1:71799777-71799796 | None:intergenic | 40.0% | |
| CAATGTCAGTGTTGTGTGTT+TGG | - | chr1.1:71797409-71797428 | MS.gene006231:CDS | 40.0% | |
| CAGAATGAAAGAGGGTCAAA+AGG | - | chr1.1:71799186-71799205 | MS.gene006231:CDS | 40.0% | |
| GAACCTAAGAAGGAAAAGGA+AGG | - | chr1.1:71798500-71798519 | MS.gene006231:CDS | 40.0% | |
| GAGTACCTTGGATTTGTCAA+GGG | - | chr1.1:71798878-71798897 | MS.gene006231:intron | 40.0% | |
| GATGATCCAAACATGTTTGC+TGG | - | chr1.1:71799778-71799797 | MS.gene006231:intron | 40.0% | |
| GATGTCAATGGTGAACAACT+TGG | - | chr1.1:71797700-71797719 | MS.gene006231:CDS | 40.0% | |
| GTATGCTGTTGGCCAATTAA+AGG | - | chr1.1:71799321-71799340 | MS.gene006231:CDS | 40.0% | |
| GTCTGGTACAAAGGAATTCA+TGG | - | chr1.1:71797513-71797532 | MS.gene006231:CDS | 40.0% | |
| GTGGATCTTTCACTGTTACT+AGG | - | chr1.1:71797677-71797696 | MS.gene006231:CDS | 40.0% | |
| GTTAAGCATTTCTCTGTGGA+GGG | - | chr1.1:71798716-71798735 | MS.gene006231:intron | 40.0% | |
| TAAGCCAGAGGAAATTACCA+AGG | - | chr1.1:71798637-71798656 | MS.gene006231:intron | 40.0% | |
| TACAAAGGAAGGGTTGAAGT+TGG | - | chr1.1:71799372-71799391 | MS.gene006231:CDS | 40.0% | |
| TACATTTGGGAATCACAAGC+TGG | - | chr1.1:71797655-71797674 | MS.gene006231:CDS | 40.0% | |
| TATCAAGCTGTATGTGAGGA+GGG | - | chr1.1:71798820-71798839 | MS.gene006231:intron | 40.0% | |
| TATCACTGGTGAGAGTAAGA+AGG | - | chr1.1:71799219-71799238 | MS.gene006231:CDS | 40.0% | |
| TCAACAAGCAGAAACCAATC+TGG | - | chr1.1:71798609-71798628 | MS.gene006231:intron | 40.0% | |
| TCTCAAACAGAAGCAACACA+AGG | + | chr1.1:71799729-71799748 | None:intergenic | 40.0% | |
| TCTCAATGCACTTCTTCACA+AGG | + | chr1.1:71798988-71799007 | None:intergenic | 40.0% | |
| TCTCAGTCCAAAGGTAGATA+GGG | + | chr1.1:71798442-71798461 | None:intergenic | 40.0% | |
| TGAGGATGATGAACCTAAGA+AGG | - | chr1.1:71798490-71798509 | MS.gene006231:CDS | 40.0% | |
| TGAGGATGTAGATGAAGAGA+AGG | - | chr1.1:71798529-71798548 | MS.gene006231:intron | 40.0% | |
| TGAGTACCTTGGATTTGTCA+AGG | - | chr1.1:71798877-71798896 | MS.gene006231:intron | 40.0% | |
| TGGTACAAAGGAATTCATGG+AGG | - | chr1.1:71797516-71797535 | MS.gene006231:CDS | 40.0% | |
| TGGTATCTGCTACAAAGGAA+GGG | - | chr1.1:71799362-71799381 | MS.gene006231:CDS | 40.0% | |
| TGTATACCTGATCTTCCTTG+AGG | + | chr1.1:71797750-71797769 | None:intergenic | 40.0% | |
| TGTGGAGAATTCTCCATTCT+TGG | - | chr1.1:71799243-71799262 | MS.gene006231:CDS | 40.0% | |
| TGTGGATTCTCCATGTTGTT+TGG | - | chr1.1:71799519-71799538 | MS.gene006231:intron | 40.0% | |
| TGTTAAGCATTTCTCTGTGG+AGG | - | chr1.1:71798715-71798734 | MS.gene006231:intron | 40.0% | |
| TTAAGGAGGTTTCTCATGAG+TGG | - | chr1.1:71798579-71798598 | MS.gene006231:intron | 40.0% | |
| TTAGCTACCCTATCTACCTT+TGG | - | chr1.1:71798432-71798451 | MS.gene006231:CDS | 40.0% | |
| TTCTCAGTCCAAAGGTAGAT+AGG | + | chr1.1:71798443-71798462 | None:intergenic | 40.0% | |
| ! | AAATCAAACGGTGCCCTTTT+GGG | + | chr1.1:71798773-71798792 | None:intergenic | 40.0% |
| ! | CATCAGACTTGTTCCTGATA+AGG | - | chr1.1:71797264-71797283 | MS.gene006231:CDS | 40.0% |
| ! | CTTTTGACCCTCTTTCATTC+TGG | + | chr1.1:71799188-71799207 | None:intergenic | 40.0% |
| ! | GGCCAATTAAAGGAGTATGA+TGG | - | chr1.1:71799331-71799350 | MS.gene006231:CDS | 40.0% |
| ! | TCTCCTTCCTTTTCCTTCTT+AGG | + | chr1.1:71798506-71798525 | None:intergenic | 40.0% |
| ! | TGACAAATCCAAGGTACTCA+GGG | + | chr1.1:71798877-71798896 | None:intergenic | 40.0% |
| ! | TGATGATGAGACTGAGAAGT+TGG | + | chr1.1:71797028-71797047 | None:intergenic | 40.0% |
| ! | TGTTTGCTGGTAGAATTCAC+AGG | - | chr1.1:71799791-71799810 | MS.gene006231:CDS | 40.0% |
| ! | TGTTTGGTGACTGGTGAATA+TGG | - | chr1.1:71799535-71799554 | MS.gene006231:intron | 40.0% |
| ! | TTGACAAATCCAAGGTACTC+AGG | + | chr1.1:71798878-71798897 | None:intergenic | 40.0% |
| !!! | CTTAACTTCTGGTTTTAGCC+TGG | - | chr1.1:71799756-71799775 | MS.gene006231:intron | 40.0% |
| AAGCAACACAAGGTCCTTCA+CGG | + | chr1.1:71799719-71799738 | None:intergenic | 45.0% | |
| AGTTGTCTCGGATAGGATTG+TGG | - | chr1.1:71799501-71799520 | MS.gene006231:intron | 45.0% | |
| ATGGAGATCAACCCTGACAA+TGG | - | chr1.1:71799643-71799662 | MS.gene006231:CDS | 45.0% | |
| ATTGATGAGGAAGAGACTGG+TGG | - | chr1.1:71799835-71799854 | MS.gene006231:CDS | 45.0% | |
| ATTTGGGAATCACAAGCTGG+TGG | - | chr1.1:71797658-71797677 | MS.gene006231:CDS | 45.0% | |
| CAACCCTGACAATGGCATTA+TGG | - | chr1.1:71799651-71799670 | MS.gene006231:CDS | 45.0% | |
| CAGTAGTCTTCTCAGTCCAA+AGG | + | chr1.1:71798451-71798470 | None:intergenic | 45.0% | |
| CATGTCTAGCAAGAAGACCA+TGG | - | chr1.1:71799624-71799643 | MS.gene006231:CDS | 45.0% | |
| CATTGCTGATGAGTTCACGA+AGG | + | chr1.1:71797079-71797098 | None:intergenic | 45.0% | |
| CCTCCATAATGCCATTGTCA+GGG | + | chr1.1:71799657-71799676 | None:intergenic | 45.0% | |
| CTACACCCTTGACAAATCCA+AGG | + | chr1.1:71798886-71798905 | None:intergenic | 45.0% | |
| CTCTGTTCTGACTATCCTCA+TGG | + | chr1.1:71799090-71799109 | None:intergenic | 45.0% | |
| CTGATCTTCCTTGAGGAACA+AGG | + | chr1.1:71797743-71797762 | None:intergenic | 45.0% | |
| CTGGTATCTGCTACAAAGGA+AGG | - | chr1.1:71799361-71799380 | MS.gene006231:CDS | 45.0% | |
| CTTGGAGGAGAGAAGGATTA+AGG | - | chr1.1:71798382-71798401 | MS.gene006231:CDS | 45.0% | |
| CTTGTTCCTCAAGGAAGATC+AGG | - | chr1.1:71797741-71797760 | MS.gene006231:CDS | 45.0% | |
| GAAGCTGGTATCTGCTACAA+AGG | - | chr1.1:71799357-71799376 | MS.gene006231:CDS | 45.0% | |
| GAATGAAGCATACTCGTCCT+TGG | + | chr1.1:71798657-71798676 | None:intergenic | 45.0% | |
| GACTGAGAAGACTACTGAGA+AGG | - | chr1.1:71798454-71798473 | MS.gene006231:CDS | 45.0% | |
| GAGACAGCACTCTTAACTTC+TGG | - | chr1.1:71799745-71799764 | MS.gene006231:intron | 45.0% | |
| GCTATTGACGAGTATGCTGT+TGG | - | chr1.1:71799310-71799329 | MS.gene006231:CDS | 45.0% | |
| GGAAAAGGAAGGAGATGTTG+AGG | - | chr1.1:71798511-71798530 | MS.gene006231:intron | 45.0% | |
| GGCTGTTAAGCATTTCTCTG+TGG | - | chr1.1:71798712-71798731 | MS.gene006231:intron | 45.0% | |
| TATGGAGGAGCTGAGAAAGA+GGG | - | chr1.1:71799669-71799688 | MS.gene006231:CDS | 45.0% | |
| TATTGCGAGGTCTGGTACAA+AGG | - | chr1.1:71797504-71797523 | MS.gene006231:CDS | 45.0% | |
| TCACCAGTCACCAAACAACA+TGG | + | chr1.1:71799532-71799551 | None:intergenic | 45.0% | |
| TCCTCCATAATGCCATTGTC+AGG | + | chr1.1:71799658-71799677 | None:intergenic | 45.0% | |
| TGCTGAAACCTTTGCATTCC+AGG | - | chr1.1:71796992-71797011 | MS.gene006231:CDS | 45.0% | |
| TGGAATACTTGGAGGAGAGA+AGG | - | chr1.1:71798375-71798394 | MS.gene006231:CDS | 45.0% | |
| TGGTGACTGGTGAATATGGA+TGG | - | chr1.1:71799539-71799558 | MS.gene006231:intron | 45.0% | |
| TTATGGAGGAGCTGAGAAAG+AGG | - | chr1.1:71799668-71799687 | MS.gene006231:CDS | 45.0% | |
| TTCACAGGATGTTGAAGCTG+GGG | - | chr1.1:71799806-71799825 | MS.gene006231:CDS | 45.0% | |
| TTGAGAGATAGCAGCATGAG+TGG | - | chr1.1:71799598-71799617 | MS.gene006231:CDS | 45.0% | |
| ! | ATTGTCAGGGTTGATCTCCA+TGG | + | chr1.1:71799644-71799663 | None:intergenic | 45.0% |
| ! | CAAATCAAACGGTGCCCTTT+TGG | + | chr1.1:71798774-71798793 | None:intergenic | 45.0% |
| ! | GAAGGAGATCAGTGATGATG+AGG | - | chr1.1:71798472-71798491 | MS.gene006231:CDS | 45.0% |
| ! | GGAGTATGATGGAAAGAAGC+TGG | - | chr1.1:71799342-71799361 | MS.gene006231:CDS | 45.0% |
| ! | TCGTCCTTGGTAATTTCCTC+TGG | + | chr1.1:71798644-71798663 | None:intergenic | 45.0% |
| ! | TCTCCATGTTGTTTGGTGAC+TGG | - | chr1.1:71799526-71799545 | MS.gene006231:intron | 45.0% |
| ! | TGGATTTGTCAAGGGTGTAG+TGG | - | chr1.1:71798886-71798905 | MS.gene006231:intron | 45.0% |
| !! | AGCATTGATGAGGAAGAGAC+TGG | - | chr1.1:71799832-71799851 | MS.gene006231:CDS | 45.0% |
| !! | AGGACCATCAAGGAGGTATT+GGG | - | chr1.1:71799460-71799479 | MS.gene006231:intron | 45.0% |
| !! | CTATGAGGTGCTTTTCATGG+TGG | - | chr1.1:71799285-71799304 | MS.gene006231:CDS | 45.0% |
| !! | GACTAAGTTGGTAGCACTCA+TGG | - | chr1.1:71797863-71797882 | MS.gene006231:CDS | 45.0% |
| !! | TCATGGAGGCATTACAAGCT+GGG | - | chr1.1:71797530-71797549 | MS.gene006231:CDS | 45.0% |
| !! | TGTGAGGAGGGTGTTCATTA+TGG | - | chr1.1:71798832-71798851 | MS.gene006231:intron | 45.0% |
| !! | TTCATGGAGGCATTACAAGC+TGG | - | chr1.1:71797529-71797548 | MS.gene006231:CDS | 45.0% |
| AATCTGGTTGCGTAAGCCAG+AGG | - | chr1.1:71798625-71798644 | MS.gene006231:intron | 50.0% | |
| AGATGAAGACATGCCTCCAC+TGG | - | chr1.1:71799858-71799877 | MS.gene006231:CDS | 50.0% | |
| CCCTGACAATGGCATTATGG+AGG | - | chr1.1:71799654-71799673 | MS.gene006231:CDS | 50.0% | |
| GAAGTTGGATGAGGAGAGTG+AGG | - | chr1.1:71799387-71799406 | MS.gene006231:CDS | 50.0% | |
| GATCTCAGCCTGGAATGCAA+AGG | + | chr1.1:71797003-71797022 | None:intergenic | 50.0% | |
| GATGGAGTGCAAACATGGAG+AGG | - | chr1.1:71799557-71799576 | MS.gene006231:CDS | 50.0% | |
| GGAAGGGTTGAAGTTGGATG+AGG | - | chr1.1:71799378-71799397 | MS.gene006231:CDS | 50.0% | |
| GGAGGGTCAACTAGAGTTCA+AGG | - | chr1.1:71798733-71798752 | MS.gene006231:intron | 50.0% | |
| GGATCTATGCAGGACCATCA+AGG | - | chr1.1:71799450-71799469 | MS.gene006231:intron | 50.0% | |
| GGGGCTGATGTTAGCATGAT+TGG | - | chr1.1:71797550-71797569 | MS.gene006231:CDS | 50.0% | |
| GTCTCCCAATACCTCCTTGA+TGG | + | chr1.1:71799467-71799486 | None:intergenic | 50.0% | |
| TCTATGCAGGACCATCAAGG+AGG | - | chr1.1:71799453-71799472 | MS.gene006231:intron | 50.0% | |
| TGAAGAGAGCAAGATGGAGG+AGG | - | chr1.1:71799894-71799913 | MS.gene006231:CDS | 50.0% | |
| TGGTGAGAGTAAGAAGGCTG+TGG | - | chr1.1:71799225-71799244 | MS.gene006231:CDS | 50.0% | |
| TTGGGTACTATTGCGAGGTC+TGG | - | chr1.1:71797496-71797515 | MS.gene006231:CDS | 50.0% | |
| ! | CAGGACCATCAAGGAGGTAT+TGG | - | chr1.1:71799459-71799478 | MS.gene006231:intron | 50.0% |
| ! | GAAGTTGGTTGATCTCAGCC+TGG | + | chr1.1:71797013-71797032 | None:intergenic | 50.0% |
| ! | TCTGGCTTACGCAACCAGAT+TGG | + | chr1.1:71798626-71798645 | None:intergenic | 50.0% |
| !! | CATGGAGGCATTACAAGCTG+GGG | - | chr1.1:71797531-71797550 | MS.gene006231:CDS | 50.0% |
| !! | GGGCTATGAGGTGCTTTTCA+TGG | - | chr1.1:71799282-71799301 | MS.gene006231:CDS | 50.0% |
| AGCTGGCTGCACACAATGGA+AGG | + | chr1.1:71798066-71798085 | None:intergenic | 55.0% | |
| ATGCCTCCACTGGAGGAAGT+AGG | - | chr1.1:71799868-71799887 | MS.gene006231:CDS | 55.0% | |
| CGCTGAAGAGAGCAAGATGG+AGG | - | chr1.1:71799891-71799910 | MS.gene006231:CDS | 55.0% | |
| GAGCTCATCCCTGAGTACCT+TGG | - | chr1.1:71798866-71798885 | MS.gene006231:intron | 55.0% | |
| GTGTAGCTGGCTGCACACAA+TGG | + | chr1.1:71798070-71798089 | None:intergenic | 55.0% | |
| TGAAGACATGCCTCCACTGG+AGG | - | chr1.1:71799861-71799880 | MS.gene006231:CDS | 55.0% | |
| !! | AGGCGCTGAAGAGAGCAAGA+TGG | - | chr1.1:71799888-71799907 | MS.gene006231:CDS | 55.0% |
| !! | GGCATTGGCATGACCAAAGC+AGG | - | chr1.1:71797316-71797335 | MS.gene006231:CDS | 55.0% |
| TCAGCGCCTACTTCCTCCAG+TGG | + | chr1.1:71799877-71799896 | None:intergenic | 60.0% | |
| !! | GCTGGGGCTCAGCATTGATG+AGG | - | chr1.1:71799822-71799841 | MS.gene006231:CDS | 60.0% |
| GCGCCTACTTCCTCCAGTGG+AGG | + | chr1.1:71799874-71799893 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 71796969 | 71799924 | 71796969 | ID=MS.gene006231 |
| chr1.1 | mRNA | 71796969 | 71799924 | 71796969 | ID=MS.gene006231.t1;Parent=MS.gene006231 |
| chr1.1 | exon | 71799787 | 71799924 | 71799787 | ID=MS.gene006231.t1.exon1;Parent=MS.gene006231.t1 |
| chr1.1 | CDS | 71799787 | 71799924 | 71799787 | ID=cds.MS.gene006231.t1;Parent=MS.gene006231.t1 |
| chr1.1 | exon | 71799556 | 71799697 | 71799556 | ID=MS.gene006231.t1.exon2;Parent=MS.gene006231.t1 |
| chr1.1 | CDS | 71799556 | 71799697 | 71799556 | ID=cds.MS.gene006231.t1;Parent=MS.gene006231.t1 |
| chr1.1 | exon | 71799131 | 71799411 | 71799131 | ID=MS.gene006231.t1.exon3;Parent=MS.gene006231.t1 |
| chr1.1 | CDS | 71799131 | 71799411 | 71799131 | ID=cds.MS.gene006231.t1;Parent=MS.gene006231.t1 |
| chr1.1 | exon | 71796969 | 71798519 | 71796969 | ID=MS.gene006231.t1.exon4;Parent=MS.gene006231.t1 |
| chr1.1 | CDS | 71796969 | 71798519 | 71796969 | ID=cds.MS.gene006231.t1;Parent=MS.gene006231.t1 |
| Gene Sequence |
| Protein sequence |
