Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007439.t1 | AES81832.1 | 98.2 | 454 | 7 | 1 | 1 | 453 | 1 | 454 | 2.80E-230 | 807.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007439.t1 | Q9LYW9 | 72.9 | 432 | 112 | 2 | 1 | 428 | 10 | 440 | 9.5e-171 | 601.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007439.t1 | G7L2R8 | 98.2 | 454 | 7 | 1 | 1 | 453 | 1 | 454 | 2.0e-230 | 807.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene007439 | MS.gene25914 | PPI |
MS.gene007439 | MS.gene036937 | PPI |
MS.gene007439 | MS.gene51850 | PPI |
MS.gene022257 | MS.gene007439 | PPI |
MS.gene007439 | MS.gene27507 | PPI |
MS.gene007439 | MS.gene70587 | PPI |
MS.gene007439 | MS.gene87680 | PPI |
MS.gene007439 | MS.gene074392 | PPI |
MS.gene92768 | MS.gene007439 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007439.t1 | MTR_7g101070 | 98.526 | 475 | 6 | 1 | 1 | 474 | 1 | 475 | 0.0 | 947 |
MS.gene007439.t1 | MTR_4g078850 | 47.000 | 100 | 47 | 2 | 358 | 451 | 4 | 103 | 1.46e-20 | 93.2 |
MS.gene007439.t1 | MTR_2g014480 | 50.000 | 96 | 46 | 2 | 358 | 451 | 4 | 99 | 1.87e-20 | 92.8 |
MS.gene007439.t1 | MTR_2g090705 | 44.545 | 110 | 51 | 2 | 358 | 457 | 4 | 113 | 2.29e-20 | 92.4 |
MS.gene007439.t1 | MTR_2g014470 | 47.917 | 96 | 49 | 1 | 358 | 452 | 4 | 99 | 6.43e-20 | 91.3 |
MS.gene007439.t1 | MTR_4g015840 | 55.385 | 65 | 29 | 0 | 358 | 422 | 4 | 68 | 1.21e-18 | 87.4 |
MS.gene007439.t1 | MTR_3g108020 | 53.846 | 65 | 30 | 0 | 358 | 422 | 4 | 68 | 2.51e-18 | 86.3 |
MS.gene007439.t1 | MTR_8g022310 | 48.276 | 87 | 37 | 2 | 354 | 432 | 6 | 92 | 1.44e-17 | 81.6 |
MS.gene007439.t1 | MTR_8g022310 | 48.276 | 87 | 37 | 2 | 354 | 432 | 6 | 92 | 1.99e-17 | 80.9 |
MS.gene007439.t1 | MTR_8g006430 | 54.651 | 86 | 32 | 3 | 359 | 442 | 15 | 95 | 4.20e-17 | 83.6 |
MS.gene007439.t1 | MTR_8g022310 | 48.276 | 87 | 37 | 2 | 354 | 432 | 6 | 92 | 5.34e-17 | 80.5 |
MS.gene007439.t1 | MTR_8g022310 | 48.276 | 87 | 37 | 2 | 354 | 432 | 6 | 92 | 6.00e-17 | 79.7 |
MS.gene007439.t1 | MTR_5g065860 | 52.174 | 69 | 32 | 1 | 353 | 421 | 43 | 110 | 5.54e-16 | 75.5 |
MS.gene007439.t1 | MTR_7g109340 | 62.121 | 66 | 24 | 1 | 357 | 422 | 25 | 89 | 5.59e-16 | 79.3 |
MS.gene007439.t1 | MTR_2g104030 | 51.724 | 87 | 38 | 3 | 358 | 442 | 70 | 154 | 1.20e-15 | 79.7 |
MS.gene007439.t1 | MTR_3g027580 | 59.091 | 66 | 26 | 1 | 357 | 422 | 88 | 152 | 2.68e-15 | 78.2 |
MS.gene007439.t1 | MTR_3g087030 | 55.385 | 65 | 27 | 1 | 358 | 422 | 82 | 144 | 1.10e-14 | 76.3 |
MS.gene007439.t1 | MTR_7g112360 | 50.000 | 68 | 31 | 1 | 359 | 423 | 17 | 84 | 1.88e-14 | 71.6 |
MS.gene007439.t1 | MTR_7g112360 | 49.333 | 75 | 33 | 2 | 359 | 428 | 17 | 91 | 3.10e-14 | 69.3 |
MS.gene007439.t1 | MTR_7g090940 | 24.194 | 496 | 278 | 13 | 27 | 437 | 696 | 1178 | 3.28e-14 | 75.9 |
MS.gene007439.t1 | MTR_1g110310 | 51.515 | 66 | 31 | 1 | 356 | 421 | 14 | 78 | 9.88e-14 | 73.2 |
MS.gene007439.t1 | MTR_4g023470 | 54.545 | 66 | 29 | 1 | 357 | 422 | 85 | 149 | 2.68e-13 | 72.0 |
MS.gene007439.t1 | MTR_5g037880 | 40.000 | 85 | 44 | 1 | 358 | 435 | 5 | 89 | 1.01e-12 | 68.9 |
MS.gene007439.t1 | MTR_7g069480 | 52.941 | 68 | 30 | 1 | 354 | 421 | 23 | 88 | 1.43e-12 | 70.1 |
MS.gene007439.t1 | MTR_3g437850 | 44.444 | 81 | 41 | 2 | 358 | 437 | 2 | 79 | 2.74e-12 | 65.5 |
MS.gene007439.t1 | MTR_6g026940 | 47.059 | 68 | 32 | 1 | 358 | 421 | 2 | 69 | 4.92e-12 | 65.1 |
MS.gene007439.t1 | MTR_2g436560 | 36.792 | 106 | 65 | 1 | 352 | 457 | 98 | 201 | 1.40e-11 | 66.2 |
MS.gene007439.t1 | MTR_5g035770 | 46.970 | 66 | 34 | 1 | 356 | 421 | 23 | 87 | 2.13e-11 | 65.9 |
MS.gene007439.t1 | MTR_4g085070 | 50.000 | 62 | 28 | 1 | 365 | 423 | 19 | 80 | 4.76e-11 | 61.6 |
MS.gene007439.t1 | MTR_2g097690 | 46.154 | 65 | 33 | 1 | 360 | 424 | 77 | 139 | 8.63e-11 | 62.0 |
MS.gene007439.t1 | MTR_3g100330 | 30.719 | 153 | 93 | 5 | 307 | 451 | 11 | 158 | 8.86e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007439.t1 | AT5G03160 | 73.094 | 446 | 113 | 3 | 1 | 442 | 10 | 452 | 0.0 | 598 |
MS.gene007439.t1 | AT5G25530 | 45.690 | 116 | 54 | 4 | 358 | 464 | 4 | 119 | 1.22e-21 | 96.3 |
MS.gene007439.t1 | AT2G20560 | 45.455 | 99 | 45 | 2 | 358 | 455 | 4 | 94 | 1.81e-19 | 89.7 |
MS.gene007439.t1 | AT5G01390 | 55.385 | 65 | 29 | 0 | 358 | 422 | 4 | 68 | 3.15e-19 | 87.0 |
MS.gene007439.t1 | AT5G25530 | 42.742 | 124 | 54 | 5 | 358 | 464 | 4 | 127 | 3.61e-19 | 89.0 |
MS.gene007439.t1 | AT5G01390 | 55.385 | 65 | 29 | 0 | 358 | 422 | 4 | 68 | 4.32e-19 | 86.7 |
MS.gene007439.t1 | AT5G01390 | 55.385 | 65 | 29 | 0 | 358 | 422 | 4 | 68 | 6.43e-19 | 87.0 |
MS.gene007439.t1 | AT4G28480 | 41.748 | 103 | 49 | 2 | 358 | 452 | 4 | 103 | 7.58e-19 | 87.0 |
MS.gene007439.t1 | AT4G28480 | 41.748 | 103 | 49 | 2 | 358 | 452 | 4 | 103 | 9.39e-19 | 87.8 |
MS.gene007439.t1 | AT3G08910 | 53.846 | 65 | 30 | 0 | 358 | 422 | 4 | 68 | 1.10e-18 | 87.4 |
MS.gene007439.t1 | AT5G01390 | 55.385 | 65 | 29 | 0 | 358 | 422 | 4 | 68 | 1.46e-18 | 87.0 |
MS.gene007439.t1 | AT1G80030 | 47.107 | 121 | 54 | 5 | 346 | 464 | 63 | 175 | 2.83e-17 | 84.7 |
MS.gene007439.t1 | AT1G80030 | 47.107 | 121 | 54 | 5 | 346 | 464 | 63 | 175 | 3.05e-17 | 84.7 |
MS.gene007439.t1 | AT1G80030 | 47.107 | 121 | 54 | 5 | 346 | 464 | 63 | 175 | 3.05e-17 | 84.7 |
MS.gene007439.t1 | AT1G80030 | 47.107 | 121 | 54 | 5 | 346 | 464 | 63 | 175 | 3.05e-17 | 84.7 |
MS.gene007439.t1 | AT2G22360 | 52.326 | 86 | 38 | 2 | 358 | 442 | 86 | 169 | 3.92e-17 | 84.0 |
MS.gene007439.t1 | AT4G39960 | 51.163 | 86 | 39 | 2 | 358 | 442 | 85 | 168 | 6.04e-17 | 83.6 |
MS.gene007439.t1 | AT4G39960 | 51.163 | 86 | 39 | 2 | 358 | 442 | 85 | 168 | 6.04e-17 | 83.6 |
MS.gene007439.t1 | AT1G10350 | 47.692 | 65 | 34 | 0 | 358 | 422 | 4 | 68 | 8.29e-17 | 82.0 |
MS.gene007439.t1 | AT1G59725 | 51.429 | 70 | 32 | 2 | 358 | 425 | 4 | 73 | 2.22e-16 | 80.5 |
MS.gene007439.t1 | AT3G47940 | 53.333 | 75 | 33 | 2 | 358 | 430 | 4 | 78 | 5.05e-16 | 79.7 |
MS.gene007439.t1 | AT1G56300 | 49.296 | 71 | 33 | 1 | 356 | 423 | 11 | 81 | 6.17e-15 | 71.6 |
MS.gene007439.t1 | AT1G56300 | 49.296 | 71 | 33 | 1 | 356 | 423 | 11 | 81 | 9.48e-15 | 72.0 |
MS.gene007439.t1 | AT3G62600 | 54.795 | 73 | 32 | 1 | 350 | 422 | 18 | 89 | 1.48e-14 | 75.1 |
MS.gene007439.t1 | AT5G48030 | 50.633 | 79 | 36 | 2 | 357 | 433 | 93 | 170 | 2.92e-14 | 75.1 |
MS.gene007439.t1 | AT3G17830 | 41.000 | 100 | 48 | 3 | 349 | 442 | 54 | 148 | 3.39e-14 | 75.1 |
MS.gene007439.t1 | AT1G68370 | 46.250 | 80 | 40 | 2 | 354 | 431 | 13 | 91 | 1.87e-13 | 72.4 |
MS.gene007439.t1 | AT3G14200 | 42.105 | 95 | 46 | 3 | 345 | 432 | 1 | 93 | 2.90e-13 | 69.7 |
MS.gene007439.t1 | AT1G72416 | 38.554 | 83 | 46 | 2 | 355 | 432 | 2 | 84 | 2.98e-13 | 68.9 |
MS.gene007439.t1 | AT1G71000 | 48.718 | 78 | 35 | 2 | 356 | 430 | 6 | 81 | 4.06e-13 | 67.8 |
MS.gene007439.t1 | AT1G71000 | 47.561 | 82 | 38 | 2 | 356 | 434 | 6 | 85 | 5.07e-13 | 67.4 |
MS.gene007439.t1 | AT2G41000 | 34.409 | 93 | 55 | 2 | 358 | 446 | 3 | 93 | 6.93e-13 | 68.2 |
MS.gene007439.t1 | AT1G72416 | 38.554 | 83 | 46 | 2 | 355 | 432 | 2 | 84 | 1.07e-12 | 67.0 |
MS.gene007439.t1 | AT1G72416 | 38.554 | 83 | 46 | 2 | 355 | 432 | 2 | 84 | 1.08e-12 | 67.0 |
MS.gene007439.t1 | AT1G72416 | 38.554 | 83 | 46 | 2 | 355 | 432 | 2 | 84 | 1.48e-12 | 66.6 |
MS.gene007439.t1 | AT3G57340 | 29.319 | 191 | 106 | 7 | 274 | 439 | 12 | 198 | 3.01e-12 | 68.6 |
MS.gene007439.t1 | AT3G57340 | 29.319 | 191 | 106 | 7 | 274 | 439 | 12 | 198 | 3.01e-12 | 68.6 |
MS.gene007439.t1 | AT2G41000 | 34.409 | 93 | 55 | 2 | 358 | 446 | 3 | 93 | 3.55e-12 | 65.5 |
MS.gene007439.t1 | AT5G16650 | 51.471 | 68 | 32 | 1 | 354 | 421 | 7 | 73 | 5.26e-12 | 64.7 |
MS.gene007439.t1 | AT2G41520 | 28.037 | 214 | 116 | 5 | 251 | 426 | 851 | 1064 | 6.64e-12 | 68.6 |
MS.gene007439.t1 | AT5G12430 | 25.105 | 239 | 141 | 4 | 229 | 429 | 876 | 1114 | 7.03e-12 | 68.6 |
MS.gene007439.t1 | AT1G59980 | 42.683 | 82 | 37 | 2 | 355 | 427 | 20 | 100 | 1.02e-11 | 66.6 |
MS.gene007439.t1 | AT2G33735 | 46.970 | 66 | 34 | 1 | 357 | 422 | 21 | 85 | 1.03e-11 | 62.4 |
MS.gene007439.t1 | AT2G33735 | 46.970 | 66 | 34 | 1 | 357 | 422 | 21 | 85 | 1.03e-11 | 62.4 |
MS.gene007439.t1 | AT5G16650 | 51.471 | 68 | 32 | 1 | 354 | 421 | 7 | 73 | 1.20e-11 | 62.4 |
MS.gene007439.t1 | AT2G41520 | 28.037 | 214 | 116 | 5 | 251 | 426 | 751 | 964 | 1.27e-11 | 67.8 |
MS.gene007439.t1 | AT1G59980 | 42.683 | 82 | 37 | 2 | 355 | 427 | 20 | 100 | 2.31e-11 | 65.9 |
MS.gene007439.t1 | AT5G05750 | 31.429 | 140 | 59 | 5 | 353 | 457 | 109 | 246 | 3.52e-11 | 64.3 |
MS.gene007439.t1 | AT5G59610 | 37.895 | 95 | 54 | 3 | 341 | 434 | 55 | 145 | 5.57e-11 | 63.5 |
MS.gene007439.t1 | AT3G12170 | 38.202 | 89 | 54 | 1 | 354 | 442 | 7 | 94 | 5.64e-11 | 63.5 |
MS.gene007439.t1 | AT3G12170 | 38.202 | 89 | 54 | 1 | 354 | 442 | 43 | 130 | 7.87e-11 | 63.5 |
MS.gene007439.t1 | AT2G41520 | 28.877 | 187 | 92 | 6 | 278 | 426 | 850 | 1033 | 8.20e-11 | 65.1 |
MS.gene007439.t1 | AT5G06910 | 37.349 | 83 | 51 | 1 | 360 | 442 | 31 | 112 | 9.32e-11 | 63.2 |
Find 108 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAGGATTATTACAAGATTT+TGG | 0.134713 | 7.3:-11962799 | MS.gene007439:CDS |
CAACCCTTTGTTTCTGCTTC+AGG | 0.202001 | 7.3:-11966831 | MS.gene007439:intron |
AAAGCATCTCGAAGTATAAA+AGG | 0.221656 | 7.3:-11965300 | MS.gene007439:CDS |
CTATGGATTCGGTGCCTTAC+AGG | 0.256750 | 7.3:-11966914 | MS.gene007439:CDS |
GGAATGGGTGGCGGCGGCGG+TGG | 0.261593 | 7.3:-11962346 | MS.gene007439:CDS |
TTCCCTGGTGGAGGCTTTCC+CGG | 0.267174 | 7.3:-11962265 | MS.gene007439:CDS |
AGCCAACTTCACAAAATCTT+TGG | 0.269965 | 7.3:-11964543 | MS.gene007439:CDS |
GATCTAGGCGAAGACCTTTC+TGG | 0.287530 | 7.3:+11964053 | None:intergenic |
ATGGGTGGCGGCGGCGGTGG+AGG | 0.326629 | 7.3:-11962343 | MS.gene007439:CDS |
ACTTATTGATGCTCTTGTTC+AGG | 0.335775 | 7.3:-11963666 | MS.gene007439:intron |
CACCCATTCCTGATTCTTCA+AGG | 0.347393 | 7.3:+11962359 | None:intergenic |
CGTATGCAGCAGCGATTTCT+CGG | 0.352911 | 7.3:+11962664 | None:intergenic |
CTCGTTGTTAACTATGGATT+CGG | 0.359454 | 7.3:-11966925 | None:intergenic |
GGCTTTCCCGGTGGCGGCGG+CGG | 0.366054 | 7.3:-11962253 | MS.gene007439:CDS |
TCAGGAATGGGTGGCGGCGG+CGG | 0.371929 | 7.3:-11962349 | MS.gene007439:CDS |
CTTATCCGGGTGCCATTGTA+AGG | 0.399906 | 7.3:+11962722 | None:intergenic |
TTTCCCGGTGGCGGCGGCGG+TGG | 0.402220 | 7.3:-11962250 | MS.gene007439:CDS |
ACATTATGTGCAAGATGGTC+AGG | 0.406282 | 7.3:+11963785 | None:intergenic |
GGCTGAAGATAATGCGAGTA+AGG | 0.407097 | 7.3:-11963858 | MS.gene007439:CDS |
CTAAACTCTTGACGGAAGAC+TGG | 0.409882 | 7.3:-11963427 | MS.gene007439:CDS |
GTTCACTATGCTCAGGATCT+AGG | 0.412241 | 7.3:+11964038 | None:intergenic |
AGCTTCACTACAACTGTTCA+AGG | 0.413274 | 7.3:+11963706 | None:intergenic |
CGGACATTCAATTGCAGAAA+AGG | 0.413425 | 7.3:-11964627 | MS.gene007439:CDS |
GGAAGATGAAAACAATTTAG+AGG | 0.413639 | 7.3:-11964231 | MS.gene007439:CDS |
GCCTGTGTAAAGTGCTAGTC+AGG | 0.413773 | 7.3:-11963748 | MS.gene007439:CDS |
GGGGAGGACCTTGAAGAATC+AGG | 0.418433 | 7.3:-11962367 | MS.gene007439:CDS |
CATAGAGGGACTGAGCTGTT+TGG | 0.420825 | 7.3:+11964570 | None:intergenic |
GAGGGTGCCATTGCTGAGTC+TGG | 0.421230 | 7.3:-11964266 | MS.gene007439:CDS |
GGGCAAGCTACGGGTGGCAG+TGG | 0.421513 | 7.3:-11963837 | MS.gene007439:CDS |
AGGTATGCTTCTGAAAGGTT+TGG | 0.434008 | 7.3:+11965225 | None:intergenic |
GGAGCTCTCTCAGCTATTGC+AGG | 0.434656 | 7.3:-11964606 | MS.gene007439:CDS |
TTCAATCCATTCGGTGGTGG+TGG | 0.445135 | 7.3:-11962319 | MS.gene007439:CDS |
CGGATAAGAATGTTGACAAA+AGG | 0.448605 | 7.3:-11962707 | MS.gene007439:CDS |
ACTTGCGAAGAACTGAAGCC+TGG | 0.451633 | 7.3:+11965199 | None:intergenic |
GGAGGCTTTCCCGGTGGCGG+CGG | 0.460764 | 7.3:-11962256 | MS.gene007439:CDS |
CCACCGGGAAAGCCTCCACC+AGG | 0.461120 | 7.3:+11962262 | None:intergenic |
ATTCTTCAAGGTCCTCCCCT+TGG | 0.461750 | 7.3:+11962371 | None:intergenic |
GATGGTGGCTTCCCTGGTGG+AGG | 0.465504 | 7.3:-11962274 | MS.gene007439:CDS |
GTCTGAAACAATCCCCTGTA+AGG | 0.471459 | 7.3:+11966900 | None:intergenic |
GATATCTGATAAAGAGTATG+AGG | 0.472530 | 7.3:-11964285 | MS.gene007439:CDS |
CAGTTCTTCGCAAGTTATGC+AGG | 0.476082 | 7.3:-11965191 | MS.gene007439:intron |
TATGGATTCGGTGCCTTACA+GGG | 0.480574 | 7.3:-11966913 | MS.gene007439:CDS |
GAATCAGGAATGGGTGGCGG+CGG | 0.483700 | 7.3:-11962352 | MS.gene007439:CDS |
CAAGCTACGGGTGGCAGTGG+AGG | 0.484614 | 7.3:-11963834 | MS.gene007439:CDS |
GTAACCACCGCCGCCGCCAC+CGG | 0.485366 | 7.3:+11962246 | None:intergenic |
CTGATCATGATGTTGCTACA+AGG | 0.485535 | 7.3:-11964172 | MS.gene007439:intron |
GGTGGAGGCTTTCCCGGTGG+CGG | 0.486071 | 7.3:-11962259 | MS.gene007439:CDS |
CATAATGTACATCTTCATCT+TGG | 0.494888 | 7.3:-11963770 | MS.gene007439:CDS |
TTCAGAAGCATACCTTTCCC+AGG | 0.497787 | 7.3:-11965217 | MS.gene007439:CDS |
GGTGGCAGTGGAGGAATTCA+AGG | 0.501651 | 7.3:-11963825 | MS.gene007439:CDS |
GGTGGAGGTTTCAATCCATT+CGG | 0.510505 | 7.3:-11962328 | MS.gene007439:CDS |
TGAAGTTGGCTGACTCATAG+AGG | 0.510931 | 7.3:+11964555 | None:intergenic |
GTTGTTACCTTAGTGCATGC+TGG | 0.513136 | 7.3:+11964488 | None:intergenic |
GGGAGAAGCTAAACTCTTGA+CGG | 0.513362 | 7.3:-11963435 | MS.gene007439:CDS |
GGTTTCAATCCATTCGGTGG+TGG | 0.522209 | 7.3:-11962322 | MS.gene007439:CDS |
GACCTTGAAGAATCAGGAAT+GGG | 0.528456 | 7.3:-11962361 | MS.gene007439:CDS |
TAACCACCGCCGCCGCCACC+GGG | 0.533943 | 7.3:+11962247 | None:intergenic |
AGGGTTGAATAATGACAAGT+TGG | 0.541100 | 7.3:+11966847 | None:intergenic |
AAGCATCTCGAAGTATAAAA+GGG | 0.546866 | 7.3:-11965299 | MS.gene007439:CDS |
GGATAAGAATGTTGACAAAA+GGG | 0.547327 | 7.3:-11962706 | MS.gene007439:CDS |
TTTCTCTCCAGCATGCACTA+AGG | 0.557072 | 7.3:-11964495 | MS.gene007439:intron |
GGACCTTGAAGAATCAGGAA+TGG | 0.557178 | 7.3:-11962362 | MS.gene007439:CDS |
ATGCGAGTAAGGGCAAGCTA+CGG | 0.560599 | 7.3:-11963847 | MS.gene007439:CDS |
TGCGAGTAAGGGCAAGCTAC+GGG | 0.563487 | 7.3:-11963846 | MS.gene007439:CDS |
TGTAAAGTGCTAGTCAGGCT+TGG | 0.567833 | 7.3:-11963743 | MS.gene007439:CDS |
ATATTCAGGCATTACCAGAA+AGG | 0.568306 | 7.3:-11964067 | MS.gene007439:intron |
CTTGCGAAGAACTGAAGCCT+GGG | 0.570619 | 7.3:+11965200 | None:intergenic |
TGCTGTCCACCACCACCGAA+TGG | 0.571837 | 7.3:+11962313 | None:intergenic |
TTTAAAGATCAGCAAACGCA+AGG | 0.572466 | 7.3:-11962817 | MS.gene007439:CDS |
AGGCTAAGCTTCTTAAAGTG+AGG | 0.576851 | 7.3:-11964313 | MS.gene007439:CDS |
AGAAATCGCTGCTGCATACG+AGG | 0.583278 | 7.3:-11962661 | MS.gene007439:intron |
TAAACTCTTGACGGAAGACT+GGG | 0.583293 | 7.3:-11963426 | MS.gene007439:CDS |
GAAGAATCAGGAATGGGTGG+CGG | 0.587103 | 7.3:-11962355 | MS.gene007439:CDS |
GTGCTAGTCAGGCTTGGCAG+AGG | 0.590572 | 7.3:-11963737 | MS.gene007439:CDS |
TATACCTGAAGCAGAAACAA+AGG | 0.591247 | 7.3:+11966827 | None:intergenic |
AAGTTTCTGGAGTTAAAACC+CGG | 0.592058 | 7.3:-11964647 | MS.gene007439:CDS |
TTTGATGGTGGCTTCCCTGG+TGG | 0.596620 | 7.3:-11962277 | MS.gene007439:CDS |
ATACCTGAAGCAGAAACAAA+GGG | 0.600717 | 7.3:+11966828 | None:intergenic |
GAAGAACTGAAGCCTGGGAA+AGG | 0.605583 | 7.3:+11965205 | None:intergenic |
GGAGGTTTCAATCCATTCGG+TGG | 0.610043 | 7.3:-11962325 | MS.gene007439:CDS |
CATTATGTGCAAGATGGTCA+GGG | 0.612509 | 7.3:+11963786 | None:intergenic |
ACAAGAAACTTGCCTTACAA+TGG | 0.614939 | 7.3:-11962734 | MS.gene007439:CDS |
ATATTCGTGAAGCATTAATG+AGG | 0.615631 | 7.3:-11962851 | MS.gene007439:CDS |
GCTGAAGATAATGCGAGTAA+GGG | 0.618327 | 7.3:-11963857 | MS.gene007439:CDS |
CTTGAAGAATCAGGAATGGG+TGG | 0.620295 | 7.3:-11962358 | MS.gene007439:CDS |
GGGAAAGGTATGCTTCTGAA+AGG | 0.621313 | 7.3:+11965220 | None:intergenic |
TATTCGTGAAGCATTAATGA+GGG | 0.627259 | 7.3:-11962850 | MS.gene007439:CDS |
CCTGGTGGAGGCTTTCCCGG+TGG | 0.627865 | 7.3:-11962262 | MS.gene007439:CDS |
AACGCACAAGATACGACCAA+GGG | 0.630643 | 7.3:-11962387 | MS.gene007439:CDS |
TGACAAAAGGGAAGAAGCAG+AGG | 0.631426 | 7.3:-11962694 | MS.gene007439:CDS |
GCCTGACTAGCACTTTACAC+AGG | 0.631954 | 7.3:+11963747 | None:intergenic |
ATGGATTCGGTGCCTTACAG+GGG | 0.639407 | 7.3:-11966912 | MS.gene007439:CDS |
GAAGTTGGCTGACTCATAGA+GGG | 0.643770 | 7.3:+11964556 | None:intergenic |
GATGTACATTATGTGCAAGA+TGG | 0.649387 | 7.3:+11963780 | None:intergenic |
CTCTTGACGGAAGACTGGGA+GGG | 0.651624 | 7.3:-11963422 | MS.gene007439:CDS |
ACTCTTGACGGAAGACTGGG+AGG | 0.654965 | 7.3:-11963423 | MS.gene007439:CDS |
AAACGCACAAGATACGACCA+AGG | 0.660195 | 7.3:-11962388 | MS.gene007439:CDS |
ACTTGCCTTACAATGGCACC+CGG | 0.661475 | 7.3:-11962727 | MS.gene007439:CDS |
AAGAAAACCAGACTCAGCAA+TGG | 0.664979 | 7.3:+11964259 | None:intergenic |
CACCGGGAAAGCCTCCACCA+GGG | 0.665138 | 7.3:+11962263 | None:intergenic |
CACAAGATACGACCAAGGGG+AGG | 0.668043 | 7.3:-11962383 | MS.gene007439:CDS |
GAGTAAGGGCAAGCTACGGG+TGG | 0.668740 | 7.3:-11963843 | MS.gene007439:CDS |
TTAGAGGCATTGTTGTTACG+TGG | 0.670478 | 7.3:-11964215 | MS.gene007439:CDS |
ATATCTGATAAAGAGTATGA+GGG | 0.673598 | 7.3:-11964284 | MS.gene007439:CDS |
AAAAGGGAAACATTATACTG+AGG | 0.693246 | 7.3:-11965283 | MS.gene007439:CDS |
TGAAGCTCTTAAGATCGATG+AGG | 0.710564 | 7.3:-11963690 | MS.gene007439:CDS |
ACGCACAAGATACGACCAAG+GGG | 0.726879 | 7.3:-11962386 | MS.gene007439:CDS |
GTAGATATGAGCAATCTGAG+AGG | 0.737942 | 7.3:-11964679 | MS.gene007439:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAAACATTAAATCAAAA+TGG | + | chr7.3:11962392-11962411 | None:intergenic | 10.0% |
!! | AATAAACATTAAATCAAAAT+GGG | + | chr7.3:11962391-11962410 | None:intergenic | 10.0% |
!! | TAAAGATATGAAATTTAATA+GGG | + | chr7.3:11962424-11962443 | None:intergenic | 10.0% |
!! | TTAAAGATATGAAATTTAAT+AGG | + | chr7.3:11962425-11962444 | None:intergenic | 10.0% |
!!! | AAATTATGTGTTTATTTTAA+AGG | - | chr7.3:11962528-11962547 | MS.gene007439:intron | 10.0% |
!!! | ATGATTAAATTTTAGAATAT+TGG | - | chr7.3:11965826-11965845 | MS.gene007439:intron | 10.0% |
!!! | ATTTTATAGCTTTTATTTTT+TGG | - | chr7.3:11962681-11962700 | MS.gene007439:CDS | 10.0% |
!!! | TTTTATAGCTTTTATTTTTT+GGG | - | chr7.3:11962682-11962701 | MS.gene007439:CDS | 10.0% |
!! | AAACTAATATCTTAAAGTAT+AGG | + | chr7.3:11964318-11964337 | None:intergenic | 15.0% |
!! | AAAGATATGAAATTTAATAG+GGG | + | chr7.3:11962423-11962442 | None:intergenic | 15.0% |
!! | AAATATAATCTAATTCAAAC+AGG | - | chr7.3:11963601-11963620 | MS.gene007439:intron | 15.0% |
!! | AATATTTGCAATAAAACTTT+AGG | - | chr7.3:11966164-11966183 | MS.gene007439:intron | 15.0% |
!! | ACAAAAAAAAAATAAATGGT+TGG | + | chr7.3:11962355-11962374 | None:intergenic | 15.0% |
!! | AGGATAATATTAGAAAAAAT+TGG | + | chr7.3:11965038-11965057 | None:intergenic | 15.0% |
!! | ATAAACATTAAATCAAAATG+GGG | + | chr7.3:11962390-11962409 | None:intergenic | 15.0% |
!! | CATTTATCATAAAATGAAAA+GGG | - | chr7.3:11963213-11963232 | MS.gene007439:intron | 15.0% |
!!! | ATGAATATTTTGTTGAATAA+CGG | - | chr7.3:11966694-11966713 | MS.gene007439:intron | 15.0% |
!! | AATGCAAGAAATAAATAACA+AGG | + | chr7.3:11965919-11965938 | None:intergenic | 20.0% |
!! | AATTCAATATATATTACCTG+AGG | + | chr7.3:11965784-11965803 | None:intergenic | 20.0% |
!! | AGAAATTTGAACAATATATC+AGG | + | chr7.3:11965187-11965206 | None:intergenic | 20.0% |
!! | AGGAATAGAAAGTAAATTTA+TGG | + | chr7.3:11964698-11964717 | None:intergenic | 20.0% |
!! | ATCTTAAAGTATAGGATTTA+TGG | + | chr7.3:11964310-11964329 | None:intergenic | 20.0% |
!! | CACTTCTAATAAAAGATATA+TGG | + | chr7.3:11963347-11963366 | None:intergenic | 20.0% |
!! | CCATTTATCATAAAATGAAA+AGG | - | chr7.3:11963212-11963231 | MS.gene007439:intron | 20.0% |
!! | GAAAATAATGCATATAAAGT+TGG | + | chr7.3:11964807-11964826 | None:intergenic | 20.0% |
!! | GAAATTTGAACAATATATCA+GGG | + | chr7.3:11965186-11965205 | None:intergenic | 20.0% |
!! | GGTATATAGTATAGTATATA+AGG | - | chr7.3:11963472-11963491 | MS.gene007439:intron | 20.0% |
!! | TAGTTATAGAATTAGTAAAG+TGG | + | chr7.3:11963032-11963051 | None:intergenic | 20.0% |
!! | TCAACAAAATATTCATATCT+AGG | + | chr7.3:11966690-11966709 | None:intergenic | 20.0% |
!! | TCTTAAAGTATAGGATTTAT+GGG | + | chr7.3:11964309-11964328 | None:intergenic | 20.0% |
!!! | AAAATCACAAGTTTTTTTCT+GGG | - | chr7.3:11965551-11965570 | MS.gene007439:intron | 20.0% |
!!! | AATTTTGCCAAAAGTTTTTA+AGG | + | chr7.3:11963548-11963567 | None:intergenic | 20.0% |
!!! | ACAAATTCAGAGTTTATTTT+TGG | + | chr7.3:11962806-11962825 | None:intergenic | 20.0% |
!!! | ATTTTGCCAAAAGTTTTTAA+GGG | + | chr7.3:11963547-11963566 | None:intergenic | 20.0% |
!!! | CAAAAAAGAAATTTTTTGCT+AGG | + | chr7.3:11965581-11965600 | None:intergenic | 20.0% |
!!! | CAAATTCAGAGTTTATTTTT+GGG | + | chr7.3:11962805-11962824 | None:intergenic | 20.0% |
!!! | CCTTTTCATTTTATGATAAA+TGG | + | chr7.3:11963215-11963234 | None:intergenic | 20.0% |
!!! | TATTATATACCATGCTTTTT+TGG | - | chr7.3:11966586-11966605 | MS.gene007439:intron | 20.0% |
!!! | TATTTCTTTGTTTTCCATAA+AGG | - | chr7.3:11965264-11965283 | MS.gene007439:CDS | 20.0% |
!!! | TGAATATTTTGTTGAATAAC+GGG | - | chr7.3:11966695-11966714 | MS.gene007439:intron | 20.0% |
!!! | TTATATGCATTATTTTCTTC+AGG | - | chr7.3:11964810-11964829 | MS.gene007439:intron | 20.0% |
!!! | TTTTCATCATTCTTTCTTTT+GGG | - | chr7.3:11965227-11965246 | MS.gene007439:CDS | 20.0% |
!!! | TTTTTCATCATTCTTTCTTT+TGG | - | chr7.3:11965226-11965245 | MS.gene007439:CDS | 20.0% |
! | AAAAGAAAAAGAAAACTACC+AGG | + | chr7.3:11966068-11966087 | None:intergenic | 25.0% |
! | AAAGTTAATGCCTAAGTATT+GGG | - | chr7.3:11964741-11964760 | MS.gene007439:intron | 25.0% |
! | AAATACTGTATTTCGTTGAT+AGG | - | chr7.3:11963267-11963286 | MS.gene007439:intron | 25.0% |
! | AAGTAATAAAGTTAGGACTT+GGG | + | chr7.3:11963708-11963727 | None:intergenic | 25.0% |
! | AATATTATCCTGCTTATATG+TGG | - | chr7.3:11965047-11965066 | MS.gene007439:intron | 25.0% |
! | AATGATATCACTATCCAATT+AGG | + | chr7.3:11964425-11964444 | None:intergenic | 25.0% |
! | AATGGTATATAGAAAGAGTT+AGG | - | chr7.3:11962777-11962796 | MS.gene007439:CDS | 25.0% |
! | ACAACACAAATAAAAACCTA+AGG | + | chr7.3:11962507-11962526 | None:intergenic | 25.0% |
! | AGAAAGTAAATTTATGGATG+TGG | + | chr7.3:11964692-11964711 | None:intergenic | 25.0% |
! | ATATTATCCTGCTTATATGT+GGG | - | chr7.3:11965048-11965067 | MS.gene007439:intron | 25.0% |
! | CTTAAAGTATAGGATTTATG+GGG | + | chr7.3:11964308-11964327 | None:intergenic | 25.0% |
! | GAGTTATAATAGGATTCATT+TGG | - | chr7.3:11966659-11966678 | MS.gene007439:intron | 25.0% |
! | TAAACCATAGCATAAAACAA+CGG | + | chr7.3:11963150-11963169 | None:intergenic | 25.0% |
! | TATAGTGCAATTAACAAACT+TGG | + | chr7.3:11963448-11963467 | None:intergenic | 25.0% |
! | TATATTAGAAAATACCTGCA+CGG | - | chr7.3:11966108-11966127 | MS.gene007439:intron | 25.0% |
! | TATCAACGAAATACAGTATT+TGG | + | chr7.3:11963268-11963287 | None:intergenic | 25.0% |
! | TATCCTTATGAAACAGAAAT+TGG | + | chr7.3:11964064-11964083 | None:intergenic | 25.0% |
! | TCTAGAGAAGTAATAAAGTT+AGG | + | chr7.3:11963715-11963734 | None:intergenic | 25.0% |
! | TGTAGTTTGAATTTGAACAT+TGG | - | chr7.3:11962719-11962738 | MS.gene007439:CDS | 25.0% |
! | TTAAAGTATAGGATTTATGG+GGG | + | chr7.3:11964307-11964326 | None:intergenic | 25.0% |
! | TTGCACATAATTACTTATCT+TGG | - | chr7.3:11965668-11965687 | MS.gene007439:intron | 25.0% |
! | TTGTTAATTGCACTATATTG+TGG | - | chr7.3:11963451-11963470 | MS.gene007439:intron | 25.0% |
! | TTTCCAATTTCTGTTTCATA+AGG | - | chr7.3:11964058-11964077 | MS.gene007439:CDS | 25.0% |
! | TTTCTATATACCATTCAAAC+AGG | + | chr7.3:11962772-11962791 | None:intergenic | 25.0% |
!! | ATATCTGATAAAGAGTATGA+GGG | - | chr7.3:11964859-11964878 | MS.gene007439:intron | 25.0% |
!! | CAAGGATTATTACAAGATTT+TGG | - | chr7.3:11966344-11966363 | MS.gene007439:intron | 25.0% |
!! | TAGTATATAAGGTCTTGTAT+TGG | - | chr7.3:11963483-11963502 | MS.gene007439:intron | 25.0% |
!!! | AAAAGAAATTTTTTGCTAGG+AGG | + | chr7.3:11965578-11965597 | None:intergenic | 25.0% |
!!! | AAAGAAATTTTTTGCTAGGA+GGG | + | chr7.3:11965577-11965596 | None:intergenic | 25.0% |
!!! | CAAAATCACAAGTTTTTTTC+TGG | - | chr7.3:11965550-11965569 | MS.gene007439:intron | 25.0% |
!!! | CAATTTCACTTTACTTTTGA+TGG | - | chr7.3:11966851-11966870 | MS.gene007439:CDS | 25.0% |
!!! | TGGGAGTATTATTTTTTAGT+GGG | + | chr7.3:11963689-11963708 | None:intergenic | 25.0% |
!!! | TTGGGAGTATTATTTTTTAG+TGG | + | chr7.3:11963690-11963709 | None:intergenic | 25.0% |
!!! | TTTTGCCAAAAGTTTTTAAG+GGG | + | chr7.3:11963546-11963565 | None:intergenic | 25.0% |
AAAAGGGAAACATTATACTG+AGG | - | chr7.3:11963860-11963879 | MS.gene007439:CDS | 30.0% | |
AAATCACTCAAACTCCTAAT+TGG | - | chr7.3:11964408-11964427 | MS.gene007439:intron | 30.0% | |
AAATGGTTGGAAAGAAATGA+AGG | + | chr7.3:11962342-11962361 | None:intergenic | 30.0% | |
AAGCATCTCGAAGTATAAAA+GGG | - | chr7.3:11963844-11963863 | MS.gene007439:CDS | 30.0% | |
AATCTCATATGATGTCATTG+TGG | + | chr7.3:11963095-11963114 | None:intergenic | 30.0% | |
AATTAGGAGTTTGAGTGATT+TGG | + | chr7.3:11964409-11964428 | None:intergenic | 30.0% | |
ACTTGTGTAATTGCTAATAC+AGG | + | chr7.3:11964718-11964737 | None:intergenic | 30.0% | |
ATATGTGGGCATATATATTC+AGG | - | chr7.3:11965062-11965081 | MS.gene007439:intron | 30.0% | |
ATTAGGAGTTTGAGTGATTT+GGG | + | chr7.3:11964408-11964427 | None:intergenic | 30.0% | |
ATTGGATAGTGATATCATTC+AGG | - | chr7.3:11964426-11964445 | MS.gene007439:intron | 30.0% | |
CATAATGTACATCTTCATCT+TGG | - | chr7.3:11965373-11965392 | MS.gene007439:intron | 30.0% | |
CTAACTTCAATAACGATAAG+GGG | + | chr7.3:11964137-11964156 | None:intergenic | 30.0% | |
CTGAACAAGGAAAAGAAATA+AGG | + | chr7.3:11966528-11966547 | None:intergenic | 30.0% | |
GAAAGTTAATGCCTAAGTAT+TGG | - | chr7.3:11964740-11964759 | MS.gene007439:intron | 30.0% | |
GAAGTAATAAAGTTAGGACT+TGG | + | chr7.3:11963709-11963728 | None:intergenic | 30.0% | |
GAATGATGAAAAACTTGAGA+AGG | + | chr7.3:11965219-11965238 | None:intergenic | 30.0% | |
GCTAACTTCAATAACGATAA+GGG | + | chr7.3:11964138-11964157 | None:intergenic | 30.0% | |
GGAAGATGAAAACAATTTAG+AGG | - | chr7.3:11964912-11964931 | MS.gene007439:intron | 30.0% | |
GGATAAGAATGTTGACAAAA+GGG | - | chr7.3:11966437-11966456 | MS.gene007439:intron | 30.0% | |
TAAAGTATAGGATTTATGGG+GGG | + | chr7.3:11964306-11964325 | None:intergenic | 30.0% | |
TAATTCAGAATTGTCTGTTG+TGG | - | chr7.3:11965962-11965981 | MS.gene007439:intron | 30.0% | |
TACCAAACTTTCAAAAAGCA+CGG | + | chr7.3:11964008-11964027 | None:intergenic | 30.0% | |
TGAATTGGTTGGATTTATTG+AGG | - | chr7.3:11962658-11962677 | MS.gene007439:intron | 30.0% | |
TGCATTTGTGTGTTTATTAG+AGG | - | chr7.3:11965933-11965952 | MS.gene007439:intron | 30.0% | |
TGCTAACTTCAATAACGATA+AGG | + | chr7.3:11964139-11964158 | None:intergenic | 30.0% | |
TTCATATAGCATGTTTCACA+CGG | - | chr7.3:11965802-11965821 | MS.gene007439:intron | 30.0% | |
TTGTGTGTTTATTAGAGGTT+TGG | - | chr7.3:11965938-11965957 | MS.gene007439:intron | 30.0% | |
TTTAGTATGACCTGTTTGAA+TGG | - | chr7.3:11962759-11962778 | MS.gene007439:CDS | 30.0% | |
! | AAAGCATCTCGAAGTATAAA+AGG | - | chr7.3:11963843-11963862 | MS.gene007439:CDS | 30.0% |
! | ATATTCGTGAAGCATTAATG+AGG | - | chr7.3:11966292-11966311 | MS.gene007439:intron | 30.0% |
! | ATCGCTACAAAGTGAAATTT+TGG | - | chr7.3:11963395-11963414 | MS.gene007439:CDS | 30.0% |
! | CTTTTGTCAACATTCTTATC+CGG | + | chr7.3:11966438-11966457 | None:intergenic | 30.0% |
! | GAACTGAAAAAAGCATACTT+TGG | - | chr7.3:11965124-11965143 | MS.gene007439:intron | 30.0% |
! | GATATCTGATAAAGAGTATG+AGG | - | chr7.3:11964858-11964877 | MS.gene007439:intron | 30.0% |
! | TATTCGTGAAGCATTAATGA+GGG | - | chr7.3:11966293-11966312 | MS.gene007439:intron | 30.0% |
! | TATTTCGTTGATAGGCATTA+TGG | - | chr7.3:11963275-11963294 | MS.gene007439:intron | 30.0% |
! | TTCCAAAGATTTTGTGAAGT+TGG | + | chr7.3:11964605-11964624 | None:intergenic | 30.0% |
! | TTTTGTCAACATTCTTATCC+GGG | + | chr7.3:11966437-11966456 | None:intergenic | 30.0% |
!! | AGTTTGTTAGCTAAGATAGT+AGG | + | chr7.3:11962972-11962991 | None:intergenic | 30.0% |
!! | TGAATAAACTTGCTGTTAAG+AGG | + | chr7.3:11963572-11963591 | None:intergenic | 30.0% |
!! | TTTCACTTTACTTTTGATGG+TGG | - | chr7.3:11966854-11966873 | MS.gene007439:CDS | 30.0% |
!! | TTTTCCGTTGTTTTATGCTA+TGG | - | chr7.3:11963143-11963162 | MS.gene007439:intron | 30.0% |
!!! | TTGATCCAACTTTGTTTTGT+GGG | - | chr7.3:11962449-11962468 | MS.gene007439:intron | 30.0% |
!!! | TTTGATCCAACTTTGTTTTG+TGG | - | chr7.3:11962448-11962467 | MS.gene007439:intron | 30.0% |
AAGTGGCATCACATAATAGT+GGG | - | chr7.3:11963237-11963256 | MS.gene007439:intron | 35.0% | |
AATCTATTATGCGATACTCC+TGG | - | chr7.3:11962992-11963011 | MS.gene007439:intron | 35.0% | |
ACAAGAAACTTGCCTTACAA+TGG | - | chr7.3:11966409-11966428 | MS.gene007439:intron | 35.0% | |
ACTTATTGATGCTCTTGTTC+AGG | - | chr7.3:11965477-11965496 | MS.gene007439:intron | 35.0% | |
AGATCAGAACCAAAAAAGAC+TGG | + | chr7.3:11963787-11963806 | None:intergenic | 35.0% | |
AGCCAACTTCACAAAATCTT+TGG | - | chr7.3:11964600-11964619 | MS.gene007439:CDS | 35.0% | |
AGGGTTGAATAATGACAAGT+TGG | + | chr7.3:11962299-11962318 | None:intergenic | 35.0% | |
ATACCTGAAGCAGAAACAAA+GGG | + | chr7.3:11962318-11962337 | None:intergenic | 35.0% | |
ATATATGCCCACATATAAGC+AGG | + | chr7.3:11965058-11965077 | None:intergenic | 35.0% | |
ATATTCAGGCATTACCAGAA+AGG | - | chr7.3:11965076-11965095 | MS.gene007439:intron | 35.0% | |
ATCTATTATGCGATACTCCT+GGG | - | chr7.3:11962993-11963012 | MS.gene007439:intron | 35.0% | |
ATTAATGCATTCCAGGAGAT+CGG | + | chr7.3:11963122-11963141 | None:intergenic | 35.0% | |
CAAAACTAGCCAAAAAAGCA+TGG | + | chr7.3:11966598-11966617 | None:intergenic | 35.0% | |
CAAATGAAACACAAGACACA+AGG | + | chr7.3:11965523-11965542 | None:intergenic | 35.0% | |
CAAATTCGAAAAGCTTCAAG+GGG | + | chr7.3:11966018-11966037 | None:intergenic | 35.0% | |
CATAAAATGAAAAGGGCAAG+TGG | - | chr7.3:11963220-11963239 | MS.gene007439:intron | 35.0% | |
CGGATAAGAATGTTGACAAA+AGG | - | chr7.3:11966436-11966455 | MS.gene007439:intron | 35.0% | |
CTTAACTGCGGAGTTATAAT+AGG | - | chr7.3:11966649-11966668 | MS.gene007439:intron | 35.0% | |
GATGTACATTATGTGCAAGA+TGG | + | chr7.3:11965366-11965385 | None:intergenic | 35.0% | |
GCAAATTCGAAAAGCTTCAA+GGG | + | chr7.3:11966019-11966038 | None:intergenic | 35.0% | |
GGAAAACATTAATGCATTCC+AGG | + | chr7.3:11963129-11963148 | None:intergenic | 35.0% | |
GTGATGATTCAGTGTTAAAG+TGG | - | chr7.3:11963747-11963766 | MS.gene007439:CDS | 35.0% | |
TAGTAGTTGTCTATAACTGC+AGG | - | chr7.3:11966263-11966282 | MS.gene007439:intron | 35.0% | |
TATACCTGAAGCAGAAACAA+AGG | + | chr7.3:11962319-11962338 | None:intergenic | 35.0% | |
TCCTGATTAAAGTCTGAACA+AGG | + | chr7.3:11966541-11966560 | None:intergenic | 35.0% | |
TCCTTGTTCAGACTTTAATC+AGG | - | chr7.3:11966537-11966556 | MS.gene007439:intron | 35.0% | |
TGTTAGCTAAGATAGTAGGA+GGG | + | chr7.3:11962968-11962987 | None:intergenic | 35.0% | |
TTAGGAGTTTGAGTGATTTG+GGG | + | chr7.3:11964407-11964426 | None:intergenic | 35.0% | |
TTGTCTTGTGGAAATGATGT+TGG | - | chr7.3:11964995-11965014 | MS.gene007439:intron | 35.0% | |
TTGTTAGCTAAGATAGTAGG+AGG | + | chr7.3:11962969-11962988 | None:intergenic | 35.0% | |
TTTAAAGATCAGCAAACGCA+AGG | - | chr7.3:11966326-11966345 | MS.gene007439:intron | 35.0% | |
! | ACCAAACTTTCAAAAAGCAC+GGG | + | chr7.3:11964007-11964026 | None:intergenic | 35.0% |
! | AGCTTCCCCTTAAAAACTTT+TGG | - | chr7.3:11963538-11963557 | MS.gene007439:intron | 35.0% |
! | ATGACAGAACTCTAGTTTCA+AGG | - | chr7.3:11962868-11962887 | MS.gene007439:intron | 35.0% |
! | CTTTTCTGCAATTGAATGTC+CGG | + | chr7.3:11964518-11964537 | None:intergenic | 35.0% |
! | GATATCATTCAGGTGCTTTT+TGG | - | chr7.3:11964436-11964455 | MS.gene007439:intron | 35.0% |
! | TTTTCTGCAATTGAATGTCC+GGG | + | chr7.3:11964517-11964536 | None:intergenic | 35.0% |
!! | AAGTTTCTGGAGTTAAAACC+CGG | - | chr7.3:11964496-11964515 | MS.gene007439:CDS | 35.0% |
!! | AATGCCTAAGTATTGGGTTT+GGG | - | chr7.3:11964747-11964766 | MS.gene007439:intron | 35.0% |
!! | GATCTAAGTCTTGTTTGAGT+AGG | - | chr7.3:11965600-11965619 | MS.gene007439:intron | 35.0% |
!! | TAAGTCTTGTTTGAGTAGGA+TGG | - | chr7.3:11965604-11965623 | MS.gene007439:intron | 35.0% |
!! | TAATGCCTAAGTATTGGGTT+TGG | - | chr7.3:11964746-11964765 | MS.gene007439:intron | 35.0% |
!! | TTTTAATGGACGCTTAACTG+CGG | - | chr7.3:11966637-11966656 | MS.gene007439:intron | 35.0% |
!! | TTTTTCAGTTCACTATGCTC+AGG | + | chr7.3:11965115-11965134 | None:intergenic | 35.0% |
!!! | AGTCTTTTTTGGTTCTGATC+TGG | - | chr7.3:11963786-11963805 | MS.gene007439:CDS | 35.0% |
!!! | CATGCTTTTTTGGCTAGTTT+TGG | - | chr7.3:11966596-11966615 | MS.gene007439:intron | 35.0% |
!!! | TCTTTTGGGTGTTGATGATT+CGG | - | chr7.3:11965241-11965260 | MS.gene007439:CDS | 35.0% |
AAGAAAACCAGACTCAGCAA+TGG | + | chr7.3:11964887-11964906 | None:intergenic | 40.0% | |
AAGCACTAGCTCGTTTGTAA+AGG | + | chr7.3:11962903-11962922 | None:intergenic | 40.0% | |
AATGACAATGTTAACCGTGC+AGG | + | chr7.3:11966125-11966144 | None:intergenic | 40.0% | |
ACATTATGTGCAAGATGGTC+AGG | + | chr7.3:11965361-11965380 | None:intergenic | 40.0% | |
ACATTGGAAACTAGAGAGAG+AGG | - | chr7.3:11962735-11962754 | MS.gene007439:CDS | 40.0% | |
ACGTATGCAAGATCGACTAA+TGG | + | chr7.3:11963187-11963206 | None:intergenic | 40.0% | |
AGCACTAGCTCGTTTGTAAA+GGG | + | chr7.3:11962902-11962921 | None:intergenic | 40.0% | |
AGCATGTTGCATGAATTGGT+TGG | - | chr7.3:11962647-11962666 | MS.gene007439:intron | 40.0% | |
AGCTTCACTACAACTGTTCA+AGG | + | chr7.3:11965440-11965459 | None:intergenic | 40.0% | |
AGGCTAAGCTTCTTAAAGTG+AGG | - | chr7.3:11964830-11964849 | MS.gene007439:intron | 40.0% | |
ATCGACCCACAAAACAAAGT+TGG | + | chr7.3:11962457-11962476 | None:intergenic | 40.0% | |
CAAGTGGCATCACATAATAG+TGG | - | chr7.3:11963236-11963255 | MS.gene007439:intron | 40.0% | |
CACTGAATCATCACATTCAC+AGG | + | chr7.3:11963741-11963760 | None:intergenic | 40.0% | |
CAGCAAGTTTATTCAGTTCG+TGG | - | chr7.3:11963577-11963596 | MS.gene007439:intron | 40.0% | |
CATGTTTCATTTCATGCTCC+TGG | - | chr7.3:11966047-11966066 | MS.gene007439:intron | 40.0% | |
CATTATGTGCAAGATGGTCA+GGG | + | chr7.3:11965360-11965379 | None:intergenic | 40.0% | |
CATTGGAAACTAGAGAGAGA+GGG | - | chr7.3:11962736-11962755 | MS.gene007439:CDS | 40.0% | |
CGCAAATTCGAAAAGCTTCA+AGG | + | chr7.3:11966020-11966039 | None:intergenic | 40.0% | |
CGCATTATCTTCAGCCTTTA+TGG | + | chr7.3:11965281-11965300 | None:intergenic | 40.0% | |
CGGACATTCAATTGCAGAAA+AGG | - | chr7.3:11964516-11964535 | MS.gene007439:CDS | 40.0% | |
CTCATATGATGTCATTGTGG+AGG | + | chr7.3:11963092-11963111 | None:intergenic | 40.0% | |
CTGATCATGATGTTGCTACA+AGG | - | chr7.3:11964971-11964990 | MS.gene007439:intron | 40.0% | |
GACCTTGAAGAATCAGGAAT+GGG | - | chr7.3:11966782-11966801 | MS.gene007439:intron | 40.0% | |
GAGGAGCTACAAAAAGTTTC+TGG | - | chr7.3:11964483-11964502 | MS.gene007439:intron | 40.0% | |
GCTGAAGATAATGCGAGTAA+GGG | - | chr7.3:11965286-11965305 | MS.gene007439:CDS | 40.0% | |
GTAGATATGAGCAATCTGAG+AGG | - | chr7.3:11964464-11964483 | MS.gene007439:intron | 40.0% | |
TAAACTCTTGACGGAAGACT+GGG | - | chr7.3:11965717-11965736 | MS.gene007439:intron | 40.0% | |
TATAGGATTTATGGGGGGTT+GGG | + | chr7.3:11964301-11964320 | None:intergenic | 40.0% | |
TGAACTAAGGGATAAGGAGT+TGG | + | chr7.3:11964264-11964283 | None:intergenic | 40.0% | |
TGAAGCTCTTAAGATCGATG+AGG | - | chr7.3:11965453-11965472 | MS.gene007439:intron | 40.0% | |
TTGCTACAAGGTTTGTCTTG+TGG | - | chr7.3:11964983-11965002 | MS.gene007439:intron | 40.0% | |
! | AGAACCAAAAAAGACTGGTC+AGG | + | chr7.3:11963782-11963801 | None:intergenic | 40.0% |
! | AGGTATGCTTCTGAAAGGTT+TGG | + | chr7.3:11963921-11963940 | None:intergenic | 40.0% |
! | CAGGAGCATGAAATGAAACA+TGG | + | chr7.3:11966049-11966068 | None:intergenic | 40.0% |
! | CCAAACTTTCAAAAAGCACG+GGG | + | chr7.3:11964006-11964025 | None:intergenic | 40.0% |
! | CTGGTTTGAACTAAGGGATA+AGG | + | chr7.3:11964270-11964289 | None:intergenic | 40.0% |
! | TTGGTGTTCCTTGTTGTAGA+GGG | - | chr7.3:11965687-11965706 | MS.gene007439:intron | 40.0% |
! | TTTGAGTGATTTGGGGTGAT+GGG | + | chr7.3:11964400-11964419 | None:intergenic | 40.0% |
! | TTTTCATCACTCTCAGCCTT+AGG | - | chr7.3:11962488-11962507 | MS.gene007439:intron | 40.0% |
!! | AGCTGAACTGGTTTGAACTA+AGG | + | chr7.3:11964277-11964296 | None:intergenic | 40.0% |
!! | GCTGAACTGGTTTGAACTAA+GGG | + | chr7.3:11964276-11964295 | None:intergenic | 40.0% |
!! | TTAGAGGCATTGTTGTTACG+TGG | - | chr7.3:11964928-11964947 | MS.gene007439:intron | 40.0% |
!!! | ATTAGTTTTCCTCCTTCGTC+CGG | - | chr7.3:11964220-11964239 | MS.gene007439:CDS | 40.0% |
!!! | CTTTTTTGGTTCTGATCTGG+TGG | - | chr7.3:11963789-11963808 | MS.gene007439:CDS | 40.0% |
!!! | TGAGATTTTTTCCGATCTCC+TGG | - | chr7.3:11963108-11963127 | MS.gene007439:intron | 40.0% |
!!! | TGAGTCTGGTTTTCTTCTCA+AGG | - | chr7.3:11964891-11964910 | MS.gene007439:intron | 40.0% |
AAACGCACAAGATACGACCA+AGG | - | chr7.3:11966755-11966774 | MS.gene007439:intron | 45.0% | |
AACAACTCAGCTGCATTTCC+TGG | + | chr7.3:11963819-11963838 | None:intergenic | 45.0% | |
AACGCACAAGATACGACCAA+GGG | - | chr7.3:11966756-11966775 | MS.gene007439:intron | 45.0% | |
ACAGCCCAAACCCAATACTT+AGG | + | chr7.3:11964754-11964773 | None:intergenic | 45.0% | |
ACTAAGGGATAAGGAGTTGG+AGG | + | chr7.3:11964261-11964280 | None:intergenic | 45.0% | |
AGCTGCTCAAAAATCTCCTC+AGG | - | chr7.3:11965765-11965784 | MS.gene007439:intron | 45.0% | |
CACCCATTCCTGATTCTTCA+AGG | + | chr7.3:11966787-11966806 | None:intergenic | 45.0% | |
CAGTTCTTCGCAAGTTATGC+AGG | - | chr7.3:11963952-11963971 | MS.gene007439:intron | 45.0% | |
CTAAACTCTTGACGGAAGAC+TGG | - | chr7.3:11965716-11965735 | MS.gene007439:intron | 45.0% | |
CTTGAAGAATCAGGAATGGG+TGG | - | chr7.3:11966785-11966804 | MS.gene007439:intron | 45.0% | |
GACACACAAGGAAATCATGC+AGG | + | chr7.3:11963070-11963089 | None:intergenic | 45.0% | |
GCACTAGCTCGTTTGTAAAG+GGG | + | chr7.3:11962901-11962920 | None:intergenic | 45.0% | |
GGACCTTGAAGAATCAGGAA+TGG | - | chr7.3:11966781-11966800 | MS.gene007439:intron | 45.0% | |
GGCTGAAGATAATGCGAGTA+AGG | - | chr7.3:11965285-11965304 | MS.gene007439:CDS | 45.0% | |
GGGAGAAGCTAAACTCTTGA+CGG | - | chr7.3:11965708-11965727 | MS.gene007439:intron | 45.0% | |
GGTGGAGGTTTCAATCCATT+CGG | - | chr7.3:11966815-11966834 | MS.gene007439:intron | 45.0% | |
GTATAGGATTTATGGGGGGT+TGG | + | chr7.3:11964302-11964321 | None:intergenic | 45.0% | |
GTGCAGCATGTTGCATGAAT+TGG | - | chr7.3:11962643-11962662 | MS.gene007439:intron | 45.0% | |
GTTCACTATGCTCAGGATCT+AGG | + | chr7.3:11965108-11965127 | None:intergenic | 45.0% | |
GTTGTTACCTTAGTGCATGC+TGG | + | chr7.3:11964658-11964677 | None:intergenic | 45.0% | |
TGACAAAAGGGAAGAAGCAG+AGG | - | chr7.3:11966449-11966468 | MS.gene007439:intron | 45.0% | |
TGAGTTCATCAGAGAGAGGA+TGG | - | chr7.3:11963300-11963319 | MS.gene007439:intron | 45.0% | |
TTCATCAGAGAGAGGATGGA+GGG | - | chr7.3:11963304-11963323 | MS.gene007439:intron | 45.0% | |
TTCTGATCTGGTGGAAAACC+AGG | - | chr7.3:11963798-11963817 | MS.gene007439:CDS | 45.0% | |
TTTCTCTCCAGCATGCACTA+AGG | - | chr7.3:11964648-11964667 | MS.gene007439:CDS | 45.0% | |
! | AAGGGGCAAAATGTTGCTTC+TGG | + | chr7.3:11964120-11964139 | None:intergenic | 45.0% |
! | ACTTTCAAAAAGCACGGGGA+TGG | + | chr7.3:11964002-11964021 | None:intergenic | 45.0% |
! | CTTTCAAAAAGCACGGGGAT+GGG | + | chr7.3:11964001-11964020 | None:intergenic | 45.0% |
! | GAAGTTGGCTGACTCATAGA+GGG | + | chr7.3:11964590-11964609 | None:intergenic | 45.0% |
! | GGGAAAGGTATGCTTCTGAA+AGG | + | chr7.3:11963926-11963945 | None:intergenic | 45.0% |
! | GGGTCGTTGCATTGTGTTTT+AGG | - | chr7.3:11966715-11966734 | MS.gene007439:intron | 45.0% |
! | GGTTTGAGTTCATCAGAGAG+AGG | - | chr7.3:11963296-11963315 | MS.gene007439:intron | 45.0% |
! | GTCTGAAACAATCCCCTGTA+AGG | + | chr7.3:11962246-11962265 | None:intergenic | 45.0% |
! | GTTTGAGTGATTTGGGGTGA+TGG | + | chr7.3:11964401-11964420 | None:intergenic | 45.0% |
! | TCTTGTATTGGCGTTGAAGC+TGG | - | chr7.3:11963495-11963514 | MS.gene007439:intron | 45.0% |
! | TGAAGTTGGCTGACTCATAG+AGG | + | chr7.3:11964591-11964610 | None:intergenic | 45.0% |
! | TGGTGTTCCTTGTTGTAGAG+GGG | - | chr7.3:11965688-11965707 | MS.gene007439:intron | 45.0% |
! | TGTAAAGTGCTAGTCAGGCT+TGG | - | chr7.3:11965400-11965419 | MS.gene007439:intron | 45.0% |
! | TTCAGAAGCATACCTTTCCC+AGG | - | chr7.3:11963926-11963945 | MS.gene007439:intron | 45.0% |
! | TTGAGTGATTTGGGGTGATG+GGG | + | chr7.3:11964399-11964418 | None:intergenic | 45.0% |
! | TTTCAAAAAGCACGGGGATG+GGG | + | chr7.3:11964000-11964019 | None:intergenic | 45.0% |
!! | CAACCCTTTGTTTCTGCTTC+AGG | - | chr7.3:11962312-11962331 | MS.gene007439:CDS | 45.0% |
!! | CCCCGTGCTTTTTGAAAGTT+TGG | - | chr7.3:11964003-11964022 | MS.gene007439:CDS | 45.0% |
!! | CTTGGTGTTCCTTGTTGTAG+AGG | - | chr7.3:11965686-11965705 | MS.gene007439:intron | 45.0% |
!! | TTAGTTTTCCTCCTTCGTCC+GGG | - | chr7.3:11964221-11964240 | MS.gene007439:CDS | 45.0% |
!!! | GTTGCCTGACCAGTCTTTTT+TGG | - | chr7.3:11963775-11963794 | MS.gene007439:CDS | 45.0% |
!! | AAATACAAAAAAAAAATAAA+TGG | + | chr7.3:11962359-11962378 | None:intergenic | 5.0% |
!!! | AAATAATTTGTTTTTTTTAA+TGG | - | chr7.3:11966623-11966642 | MS.gene007439:intron | 5.0% |
ACGCACAAGATACGACCAAG+GGG | - | chr7.3:11966757-11966776 | MS.gene007439:intron | 50.0% | |
ACTTGCCTTACAATGGCACC+CGG | - | chr7.3:11966416-11966435 | MS.gene007439:intron | 50.0% | |
ACTTGCGAAGAACTGAAGCC+TGG | + | chr7.3:11963947-11963966 | None:intergenic | 50.0% | |
AGAAATCGCTGCTGCATACG+AGG | - | chr7.3:11966482-11966501 | MS.gene007439:intron | 50.0% | |
AGCTTCTCCCCTCTACAACA+AGG | + | chr7.3:11965698-11965717 | None:intergenic | 50.0% | |
ATGCGAGTAAGGGCAAGCTA+CGG | - | chr7.3:11965296-11965315 | MS.gene007439:CDS | 50.0% | |
ATTCTTCAAGGTCCTCCCCT+TGG | + | chr7.3:11966775-11966794 | None:intergenic | 50.0% | |
CATAGAGGGACTGAGCTGTT+TGG | + | chr7.3:11964576-11964595 | None:intergenic | 50.0% | |
CGTATGCAGCAGCGATTTCT+CGG | + | chr7.3:11966482-11966501 | None:intergenic | 50.0% | |
CTTCGCAAGTTATGCAGGTG+TGG | - | chr7.3:11963957-11963976 | MS.gene007439:intron | 50.0% | |
CTTGCGAAGAACTGAAGCCT+GGG | + | chr7.3:11963946-11963965 | None:intergenic | 50.0% | |
GAAGAACTGAAGCCTGGGAA+AGG | + | chr7.3:11963941-11963960 | None:intergenic | 50.0% | |
GAAGAATCAGGAATGGGTGG+CGG | - | chr7.3:11966788-11966807 | MS.gene007439:intron | 50.0% | |
GATAAGGAGTTGGAGGTCCT+GGG | + | chr7.3:11964254-11964273 | None:intergenic | 50.0% | |
GATCTAGGCGAAGACCTTTC+TGG | + | chr7.3:11965093-11965112 | None:intergenic | 50.0% | |
GCCTGACTAGCACTTTACAC+AGG | + | chr7.3:11965399-11965418 | None:intergenic | 50.0% | |
GGAGGTTTCAATCCATTCGG+TGG | - | chr7.3:11966818-11966837 | MS.gene007439:intron | 50.0% | |
GTCATTGTGGAGGACACACA+AGG | + | chr7.3:11963082-11963101 | None:intergenic | 50.0% | |
GTTCATCAGAGAGAGGATGG+AGG | - | chr7.3:11963303-11963322 | MS.gene007439:intron | 50.0% | |
TCATCAGAGAGAGGATGGAG+GGG | - | chr7.3:11963305-11963324 | MS.gene007439:intron | 50.0% | |
! | ATGAGAAGTGTGAGGGAAGG+AGG | + | chr7.3:11964370-11964389 | None:intergenic | 50.0% |
! | GAGATGAGAAGTGTGAGGGA+AGG | + | chr7.3:11964373-11964392 | None:intergenic | 50.0% |
! | GCCTGTGTAAAGTGCTAGTC+AGG | - | chr7.3:11965395-11965414 | MS.gene007439:intron | 50.0% |
! | GGAGGAGATGAGAAGTGTGA+GGG | + | chr7.3:11964377-11964396 | None:intergenic | 50.0% |
! | GGTTTCAATCCATTCGGTGG+TGG | - | chr7.3:11966821-11966840 | MS.gene007439:intron | 50.0% |
! | TGAGAAGTGTGAGGGAAGGA+GGG | + | chr7.3:11964369-11964388 | None:intergenic | 50.0% |
! | TGAGTGATTTGGGGTGATGG+GGG | + | chr7.3:11964398-11964417 | None:intergenic | 50.0% |
! | TGCGCGTTTTATCTCAGCAG+CGG | + | chr7.3:11966388-11966407 | None:intergenic | 50.0% |
! | TTCAATCCATTCGGTGGTGG+TGG | - | chr7.3:11966824-11966843 | MS.gene007439:intron | 50.0% |
!! | ATGGATTCGGTGCCTTACAG+GGG | - | chr7.3:11962231-11962250 | MS.gene007439:CDS | 50.0% |
!! | CTTATCCGGGTGCCATTGTA+AGG | + | chr7.3:11966424-11966443 | None:intergenic | 50.0% |
!!! | ACTTTTGATGGTGGCTTCCC+TGG | - | chr7.3:11966863-11966882 | MS.gene007439:CDS | 50.0% |
ACTCTTGACGGAAGACTGGG+AGG | - | chr7.3:11965720-11965739 | MS.gene007439:intron | 55.0% | |
CACAAGATACGACCAAGGGG+AGG | - | chr7.3:11966760-11966779 | MS.gene007439:intron | 55.0% | |
CACGGGGATGGGGTAATACT+TGG | + | chr7.3:11963990-11964009 | None:intergenic | 55.0% | |
CTCTTGACGGAAGACTGGGA+GGG | - | chr7.3:11965721-11965740 | MS.gene007439:intron | 55.0% | |
GAGGTCCTGGGTTCAAAACC+CGG | + | chr7.3:11964242-11964261 | None:intergenic | 55.0% | |
GGAGCTCTCTCAGCTATTGC+AGG | - | chr7.3:11964537-11964556 | MS.gene007439:CDS | 55.0% | |
GGATAAGGAGTTGGAGGTCC+TGG | + | chr7.3:11964255-11964274 | None:intergenic | 55.0% | |
GGGGAGGACCTTGAAGAATC+AGG | - | chr7.3:11966776-11966795 | MS.gene007439:intron | 55.0% | |
GGTGGCAGTGGAGGAATTCA+AGG | - | chr7.3:11965318-11965337 | MS.gene007439:CDS | 55.0% | |
GTTCAAAACCCGGACGAAGG+AGG | + | chr7.3:11964232-11964251 | None:intergenic | 55.0% | |
TGCGAGTAAGGGCAAGCTAC+GGG | - | chr7.3:11965297-11965316 | MS.gene007439:CDS | 55.0% | |
TGGGTTCAAAACCCGGACGA+AGG | + | chr7.3:11964235-11964254 | None:intergenic | 55.0% | |
! | AGAAGTGTGAGGGAAGGAGG+GGG | + | chr7.3:11964367-11964386 | None:intergenic | 55.0% |
! | GAGAAGTGTGAGGGAAGGAG+GGG | + | chr7.3:11964368-11964387 | None:intergenic | 55.0% |
! | GGGAGGAGATGAGAAGTGTG+AGG | + | chr7.3:11964378-11964397 | None:intergenic | 55.0% |
!! | TTTGATGGTGGCTTCCCTGG+TGG | - | chr7.3:11966866-11966885 | MS.gene007439:CDS | 55.0% |
!!! | TTCGTCCGGGTTTTGAACCC+AGG | - | chr7.3:11964234-11964253 | MS.gene007439:CDS | 55.0% |
GAGGGGGATGAGTGGCACAA+TGG | + | chr7.3:11964351-11964370 | None:intergenic | 60.0% | |
GAGTAAGGGCAAGCTACGGG+TGG | - | chr7.3:11965300-11965319 | MS.gene007439:CDS | 60.0% | |
GTGCTAGTCAGGCTTGGCAG+AGG | - | chr7.3:11965406-11965425 | MS.gene007439:intron | 60.0% | |
TGCTGTCCACCACCACCGAA+TGG | + | chr7.3:11966833-11966852 | None:intergenic | 60.0% | |
TTCCCTGGTGGAGGCTTTCC+CGG | - | chr7.3:11966878-11966897 | MS.gene007439:CDS | 60.0% | |
! | GAATCAGGAATGGGTGGCGG+CGG | - | chr7.3:11966791-11966810 | MS.gene007439:intron | 60.0% |
!! | GAGGGTGCCATTGCTGAGTC+TGG | - | chr7.3:11964877-11964896 | MS.gene007439:intron | 60.0% |
!! | GTGATTTGGGGTGATGGGGG+AGG | + | chr7.3:11964395-11964414 | None:intergenic | 60.0% |
CAAGCTACGGGTGGCAGTGG+AGG | - | chr7.3:11965309-11965328 | MS.gene007439:CDS | 65.0% | |
CACCGGGAAAGCCTCCACCA+GGG | + | chr7.3:11966883-11966902 | None:intergenic | 65.0% | |
GAGGGAAGGAGGGGGATGAG+TGG | + | chr7.3:11964359-11964378 | None:intergenic | 65.0% | |
GGGGGGTTGGGTAGCTGAAC+TGG | + | chr7.3:11964289-11964308 | None:intergenic | 65.0% | |
GTGGTCACGAGTCACGACCC+AGG | + | chr7.3:11963013-11963032 | None:intergenic | 65.0% | |
! | GATGGTGGCTTCCCTGGTGG+AGG | - | chr7.3:11966869-11966888 | MS.gene007439:CDS | 65.0% |
CCACCGGGAAAGCCTCCACC+AGG | + | chr7.3:11966884-11966903 | None:intergenic | 70.0% | |
CCTGGTGGAGGCTTTCCCGG+TGG | - | chr7.3:11966881-11966900 | MS.gene007439:CDS | 70.0% | |
GGGCAAGCTACGGGTGGCAG+TGG | - | chr7.3:11965306-11965325 | MS.gene007439:CDS | 70.0% | |
GGTGGAGGCTTTCCCGGTGG+CGG | - | chr7.3:11966884-11966903 | MS.gene007439:CDS | 70.0% | |
! | TCAGGAATGGGTGGCGGCGG+CGG | - | chr7.3:11966794-11966813 | MS.gene007439:intron | 70.0% |
GTAACCACCGCCGCCGCCAC+CGG | + | chr7.3:11966900-11966919 | None:intergenic | 75.0% | |
TAACCACCGCCGCCGCCACC+GGG | + | chr7.3:11966899-11966918 | None:intergenic | 75.0% | |
! | GGAGGCTTTCCCGGTGGCGG+CGG | - | chr7.3:11966887-11966906 | MS.gene007439:CDS | 75.0% |
!! | ATGGGTGGCGGCGGCGGTGG+AGG | - | chr7.3:11966800-11966819 | MS.gene007439:intron | 80.0% |
!! | GGAATGGGTGGCGGCGGCGG+TGG | - | chr7.3:11966797-11966816 | MS.gene007439:intron | 80.0% |
!! | GGCTTTCCCGGTGGCGGCGG+CGG | - | chr7.3:11966890-11966909 | MS.gene007439:CDS | 80.0% |
!! | TTTCCCGGTGGCGGCGGCGG+TGG | - | chr7.3:11966893-11966912 | MS.gene007439:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 11962231 | 11966934 | 11962231 | ID=MS.gene007439 |
chr7.3 | mRNA | 11962231 | 11966934 | 11962231 | ID=MS.gene007439.t1;Parent=MS.gene007439 |
chr7.3 | exon | 11966832 | 11966934 | 11966832 | ID=MS.gene007439.t1.exon1;Parent=MS.gene007439.t1 |
chr7.3 | CDS | 11966832 | 11966934 | 11966832 | ID=cds.MS.gene007439.t1;Parent=MS.gene007439.t1 |
chr7.3 | exon | 11965192 | 11965345 | 11965192 | ID=MS.gene007439.t1.exon2;Parent=MS.gene007439.t1 |
chr7.3 | CDS | 11965192 | 11965345 | 11965192 | ID=cds.MS.gene007439.t1;Parent=MS.gene007439.t1 |
chr7.3 | exon | 11964496 | 11964697 | 11964496 | ID=MS.gene007439.t1.exon3;Parent=MS.gene007439.t1 |
chr7.3 | CDS | 11964496 | 11964697 | 11964496 | ID=cds.MS.gene007439.t1;Parent=MS.gene007439.t1 |
chr7.3 | exon | 11964173 | 11964333 | 11964173 | ID=MS.gene007439.t1.exon4;Parent=MS.gene007439.t1 |
chr7.3 | CDS | 11964173 | 11964333 | 11964173 | ID=cds.MS.gene007439.t1;Parent=MS.gene007439.t1 |
chr7.3 | exon | 11963988 | 11964081 | 11963988 | ID=MS.gene007439.t1.exon5;Parent=MS.gene007439.t1 |
chr7.3 | CDS | 11963988 | 11964081 | 11963988 | ID=cds.MS.gene007439.t1;Parent=MS.gene007439.t1 |
chr7.3 | exon | 11963667 | 11963879 | 11963667 | ID=MS.gene007439.t1.exon6;Parent=MS.gene007439.t1 |
chr7.3 | CDS | 11963667 | 11963879 | 11963667 | ID=cds.MS.gene007439.t1;Parent=MS.gene007439.t1 |
chr7.3 | exon | 11963379 | 11963459 | 11963379 | ID=MS.gene007439.t1.exon7;Parent=MS.gene007439.t1 |
chr7.3 | CDS | 11963379 | 11963459 | 11963379 | ID=cds.MS.gene007439.t1;Parent=MS.gene007439.t1 |
chr7.3 | exon | 11962662 | 11962880 | 11962662 | ID=MS.gene007439.t1.exon8;Parent=MS.gene007439.t1 |
chr7.3 | CDS | 11962662 | 11962880 | 11962662 | ID=cds.MS.gene007439.t1;Parent=MS.gene007439.t1 |
chr7.3 | exon | 11962231 | 11962428 | 11962231 | ID=MS.gene007439.t1.exon9;Parent=MS.gene007439.t1 |
chr7.3 | CDS | 11962231 | 11962428 | 11962231 | ID=cds.MS.gene007439.t1;Parent=MS.gene007439.t1 |
Gene Sequence |
Protein sequence |