Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036937.t1 | XP_024626163.1 | 97.1 | 175 | 5 | 0 | 737 | 911 | 662 | 836 | 5.70E-83 | 319.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036937.t1 | A0A072U0S8 | 97.1 | 173 | 5 | 0 | 739 | 911 | 739 | 911 | 6.0e-82 | 315.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene25914 | MS.gene036937 | PPI |
| MS.gene036548 | MS.gene036937 | PPI |
| MS.gene29263 | MS.gene036937 | PPI |
| MS.gene056171 | MS.gene036937 | PPI |
| MS.gene002806 | MS.gene036937 | PPI |
| MS.gene007439 | MS.gene036937 | PPI |
| MS.gene016665 | MS.gene036937 | PPI |
| MS.gene049813 | MS.gene036937 | PPI |
| MS.gene036937 | MS.gene95252 | PPI |
| MS.gene036937 | MS.gene074392 | PPI |
| MS.gene88572 | MS.gene036937 | PPI |
| MS.gene97056 | MS.gene036937 | PPI |
| MS.gene20056 | MS.gene036937 | PPI |
| MS.gene004491 | MS.gene036937 | PPI |
| MS.gene007508 | MS.gene036937 | PPI |
| MS.gene036937 | MS.gene70587 | PPI |
| MS.gene033811 | MS.gene036937 | PPI |
| MS.gene45751 | MS.gene036937 | PPI |
| MS.gene060358 | MS.gene036937 | PPI |
| MS.gene036937 | MS.gene067126 | PPI |
| MS.gene036937 | MS.gene75814 | PPI |
| MS.gene00961 | MS.gene036937 | PPI |
| MS.gene036937 | MS.gene22441 | PPI |
| MS.gene036937 | MS.gene91079 | PPI |
| MS.gene022257 | MS.gene036937 | PPI |
| MS.gene041500 | MS.gene036937 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036937.t1 | MTR_7g073700 | 87.939 | 912 | 65 | 5 | 22 | 911 | 23 | 911 | 0.0 | 1515 |
| MS.gene036937.t1 | MTR_7g073700 | 86.628 | 688 | 59 | 4 | 22 | 687 | 23 | 699 | 0.0 | 1135 |
| MS.gene036937.t1 | MTR_0279s0010 | 71.875 | 224 | 54 | 1 | 275 | 489 | 1 | 224 | 8.72e-99 | 308 |
| MS.gene036937.t1 | MTR_0279s0010 | 46.078 | 102 | 55 | 0 | 419 | 520 | 61 | 162 | 2.92e-15 | 76.6 |
| MS.gene036937.t1 | MTR_7g073690 | 45.485 | 299 | 95 | 4 | 121 | 418 | 27 | 258 | 4.35e-58 | 211 |
| MS.gene036937.t1 | MTR_7g073690 | 54.167 | 144 | 56 | 4 | 9 | 149 | 9 | 145 | 6.03e-19 | 92.4 |
| MS.gene036937.t1 | MTR_7g073690 | 62.222 | 90 | 34 | 0 | 329 | 418 | 5 | 94 | 1.43e-22 | 102 |
| MS.gene036937.t1 | MTR_7g073690 | 46.512 | 86 | 46 | 0 | 388 | 473 | 1 | 86 | 1.38e-13 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036937.t1 | AT2G38580 | 34.884 | 473 | 233 | 9 | 435 | 904 | 81 | 481 | 7.19e-55 | 198 |
| MS.gene036937.t1 | AT2G38580 | 33.624 | 229 | 146 | 2 | 334 | 562 | 85 | 307 | 4.91e-20 | 95.1 |
| MS.gene036937.t1 | AT2G38580 | 34.505 | 455 | 209 | 11 | 460 | 904 | 85 | 460 | 9.60e-51 | 186 |
| MS.gene036937.t1 | AT2G38580 | 31.868 | 273 | 160 | 4 | 393 | 646 | 81 | 346 | 8.05e-22 | 100 |
| MS.gene036937.t1 | AT2G38580 | 32.751 | 229 | 127 | 4 | 334 | 562 | 85 | 286 | 9.52e-17 | 84.7 |
| MS.gene036937.t1 | AT2G38580 | 34.532 | 278 | 138 | 4 | 435 | 711 | 81 | 315 | 2.29e-26 | 111 |
| MS.gene036937.t1 | AT2G38580 | 34.711 | 242 | 151 | 1 | 373 | 614 | 82 | 316 | 1.93e-24 | 105 |
| MS.gene036937.t1 | AT2G38580 | 30.634 | 284 | 148 | 3 | 393 | 676 | 81 | 315 | 1.34e-19 | 91.7 |
| MS.gene036937.t1 | AT2G38580 | 33.624 | 229 | 146 | 2 | 334 | 562 | 85 | 307 | 1.34e-19 | 91.7 |
| MS.gene036937.t1 | AT2G38580 | 31.696 | 224 | 146 | 1 | 351 | 567 | 81 | 304 | 2.18e-17 | 85.1 |
Find 179 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTTCTTCTTTCAATTTA+TGG | 0.016395 | 7.3:+31289756 | None:intergenic |
| TCTACATCCTCGGTAGAATT+TGG | 0.200816 | 7.3:+31291161 | None:intergenic |
| ATAACAGATGCTCCTCTTAT+TGG | 0.210076 | 7.3:-31284262 | MS.gene036937:CDS |
| ATTGATACACACATTCTTAA+AGG | 0.234017 | 7.3:-31289737 | MS.gene036937:CDS |
| TCCAATCAGAGATTTGAATT+TGG | 0.251426 | 7.3:-31290544 | MS.gene036937:CDS |
| TGAAGAGACTATCAGAAAAT+TGG | 0.251720 | 7.3:-31289479 | MS.gene036937:CDS |
| GGATGAGCCCACTCAGCTTT+TGG | 0.255578 | 7.3:-31290619 | MS.gene036937:CDS |
| GGGTTGGAGAAACAGCTATT+AGG | 0.264030 | 7.3:-31291337 | MS.gene036937:CDS |
| TACTGGTGTTTGAGGAGTTT+TGG | 0.270706 | 7.3:+31284179 | None:intergenic |
| TTCTAGCAAAAGATTATTCT+TGG | 0.296886 | 7.3:+31285282 | None:intergenic |
| TACAATTAGAAAGTTGAATA+AGG | 0.301635 | 7.3:-31289161 | MS.gene036937:CDS |
| TCGATTGGGAATGGAGAAAT+AGG | 0.304938 | 7.3:-31290675 | MS.gene036937:CDS |
| TGCAATTGTCTCCTCTGCTT+TGG | 0.308218 | 7.3:+31288870 | None:intergenic |
| ATCAAACTTTCTGAAGTTAC+TGG | 0.312931 | 7.3:-31284550 | MS.gene036937:CDS |
| ATAAGAGGAGCATCTGTTAT+TGG | 0.337358 | 7.3:+31284265 | None:intergenic |
| TTGATACACACATTCTTAAA+GGG | 0.337497 | 7.3:-31289736 | MS.gene036937:CDS |
| ACCAAATTCAAATCTCTGAT+TGG | 0.338746 | 7.3:+31290543 | None:intergenic |
| TCGATCGTAGATGGAGAAAT+AGG | 0.338974 | 7.3:-31290861 | MS.gene036937:CDS |
| AGAGCAGAAAGTAAATATTC+TGG | 0.339054 | 7.3:-31287806 | MS.gene036937:CDS |
| TTTCACAGTCTCCGAAATAC+TGG | 0.347240 | 7.3:+31291277 | None:intergenic |
| ATAAGAATAATGTGGACATT+GGG | 0.355821 | 7.3:-31291358 | MS.gene036937:CDS |
| TCAATTCGGGGTGGTGAAAC+AGG | 0.357244 | 7.3:-31291251 | MS.gene036937:CDS |
| TTCTCTGCAGACTGATTTAG+AGG | 0.364239 | 7.3:-31288415 | MS.gene036937:intron |
| ATGGATGGTCTCTTCTGATA+TGG | 0.364593 | 7.3:+31289775 | None:intergenic |
| GCAGAAAATTCGATTGTTGA+TGG | 0.376506 | 7.3:-31290978 | MS.gene036937:CDS |
| GGTTGGAGAAACAGCTATTA+GGG | 0.378482 | 7.3:-31291336 | MS.gene036937:CDS |
| GGATGAACATGCCAGTATTT+CGG | 0.379221 | 7.3:-31291288 | MS.gene036937:CDS |
| GTATGTTAGTGGTGCTGATT+TGG | 0.380648 | 7.3:-31284206 | MS.gene036937:CDS |
| AGATGTAACCTCAGATGATT+CGG | 0.381160 | 7.3:+31284489 | None:intergenic |
| GAGGTGTTGGTAAATTCAAA+TGG | 0.382323 | 7.3:-31290783 | MS.gene036937:CDS |
| CCACTATTAAAATCAATTAC+TGG | 0.382433 | 7.3:+31284162 | None:intergenic |
| GAAAGTTTGATTTCCGTGTC+TGG | 0.384943 | 7.3:+31284562 | None:intergenic |
| GATCAAAATCTAATGAATAA+TGG | 0.387784 | 7.3:-31291032 | MS.gene036937:CDS |
| TGTGCCGGAGTTGGATTCAT+TGG | 0.393324 | 7.3:-31284461 | MS.gene036937:CDS |
| TCTGATAGTCTCTTCAGATA+TGG | 0.394533 | 7.3:+31289486 | None:intergenic |
| CTGTAGATCTCTTGCATGCT+CGG | 0.402514 | 7.3:+31284396 | None:intergenic |
| TTCCGAGGCTAATCTTTGTC+AGG | 0.410079 | 7.3:-31290895 | MS.gene036937:CDS |
| CTTACACATTCTATACCATT+TGG | 0.412540 | 7.3:+31290438 | None:intergenic |
| TCGATTGTTGATGGAGCATC+TGG | 0.416024 | 7.3:-31290969 | MS.gene036937:CDS |
| CGACGGGCAAAATACTAATA+TGG | 0.416401 | 7.3:-31290478 | MS.gene036937:CDS |
| CAGAAAATTGGAAGAACAAA+AGG | 0.418589 | 7.3:-31289467 | MS.gene036937:CDS |
| TACTACCTCTTTCTCACTAA+AGG | 0.422292 | 7.3:+31287768 | None:intergenic |
| AAATCAATTACTGGTGTTTG+AGG | 0.428663 | 7.3:+31284171 | None:intergenic |
| TCATGTCAGAAGAGACAATC+AGG | 0.429236 | 7.3:-31289622 | MS.gene036937:CDS |
| AGGTACCTGGGATCAGAATC+TGG | 0.432961 | 7.3:-31290655 | MS.gene036937:CDS |
| GAGTTCATTTGTTGAGAAAG+AGG | 0.433857 | 7.3:-31286656 | MS.gene036937:intron |
| AGCTTGGCAGGTGGCAGAGT+TGG | 0.433989 | 7.3:-31285311 | MS.gene036937:intron |
| GGGGTGGTGAAACAGGTAAC+GGG | 0.437119 | 7.3:-31291244 | MS.gene036937:CDS |
| ACGTACCAGGGATCAGAATC+TGG | 0.438640 | 7.3:-31291135 | MS.gene036937:CDS |
| GATTTGAATTTGGTGAAAAG+TGG | 0.443291 | 7.3:-31290534 | MS.gene036937:CDS |
| TGTTACCTCTTTCTCACTAA+AGG | 0.443854 | 7.3:+31287204 | None:intergenic |
| ATCTATATCTGTGCCGGAGT+TGG | 0.444756 | 7.3:-31284470 | MS.gene036937:CDS |
| TGCCCGTCGGCCGACTCCAT+TGG | 0.448013 | 7.3:+31290492 | None:intergenic |
| ACAATTTCTTCAATATCATC+TGG | 0.449189 | 7.3:+31284367 | None:intergenic |
| GCCGACTCCATTGGTTGAGC+AGG | 0.449473 | 7.3:+31290501 | None:intergenic |
| GCAGTAAGTTCGATCGTAGA+TGG | 0.452676 | 7.3:-31290870 | MS.gene036937:CDS |
| GAACTTATTTCAAATCTGAA+TGG | 0.455223 | 7.3:-31285885 | MS.gene036937:CDS |
| GGATTCATTGGAAAAGACTT+TGG | 0.455291 | 7.3:-31284449 | MS.gene036937:CDS |
| TCCATGCACAATCGAATTTG+CGG | 0.455431 | 7.3:+31291070 | None:intergenic |
| ACCATTTGGCAGATGTCCAT+TGG | 0.457360 | 7.3:+31290452 | None:intergenic |
| GAGTTCCTTTAGTGAGAAAG+AGG | 0.458579 | 7.3:-31287773 | MS.gene036937:intron |
| AGTTAATCTTTCTGAGGTGT+TGG | 0.461282 | 7.3:-31290796 | MS.gene036937:CDS |
| GATGTAACCTCAGATGATTC+GGG | 0.461463 | 7.3:+31284490 | None:intergenic |
| GAGTTCCTTTAGTGAGAAAG+AGG | 0.463904 | 7.3:-31287209 | MS.gene036937:intron |
| TGATGGACAGGACCGCGCTT+CGG | 0.465891 | 7.3:-31284855 | MS.gene036937:intron |
| TGCTAGAAAACCAGCAATTG+AGG | 0.469562 | 7.3:-31285267 | MS.gene036937:CDS |
| AAAGGACATGCATGTGCAAA+AGG | 0.475045 | 7.3:-31289449 | MS.gene036937:CDS |
| AGAAATTGTTCAAATTCCAC+TGG | 0.475276 | 7.3:-31284353 | MS.gene036937:CDS |
| ACAAATTCAGTCAAACCATC+AGG | 0.478329 | 7.3:+31284526 | None:intergenic |
| AGGTAACGGGGATCATAATC+TGG | 0.480820 | 7.3:-31291231 | MS.gene036937:CDS |
| AGGTAACAGAGGTCATAATC+TGG | 0.481534 | 7.3:-31290841 | MS.gene036937:CDS |
| CAATATGTTATTGAATGAAA+AGG | 0.481744 | 7.3:-31288007 | MS.gene036937:intron |
| AATCGAATTTGTCGCAGTCT+CGG | 0.484689 | 7.3:+31290692 | None:intergenic |
| GCTAGAAAACCAGCAATTGA+GGG | 0.485750 | 7.3:-31285266 | MS.gene036937:CDS |
| AATAAGAATAATGTGGACAT+TGG | 0.486760 | 7.3:-31291359 | MS.gene036937:CDS |
| TTCTTCTTTCAATTTATGGA+TGG | 0.488135 | 7.3:+31289760 | None:intergenic |
| TAGTAGCTCTTCCGCTTCAC+AGG | 0.491680 | 7.3:-31285200 | MS.gene036937:CDS |
| AGATGGAGGATGATAAGAAA+AGG | 0.492027 | 7.3:-31291412 | MS.gene036937:CDS |
| CTAATGAATAATGGTAAGGA+TGG | 0.496905 | 7.3:-31291023 | MS.gene036937:CDS |
| ATATCATATATAGGCTGGAT+TGG | 0.502042 | 7.3:-31288040 | MS.gene036937:intron |
| CGAAATGGAGCACCAATAAG+AGG | 0.502472 | 7.3:+31284250 | None:intergenic |
| TAATATGCACATTCTGAAAG+AGG | 0.504205 | 7.3:-31289582 | MS.gene036937:intron |
| TCCAATGGACATCTGCCAAA+TGG | 0.508005 | 7.3:-31290453 | MS.gene036937:CDS |
| AGGATGTAGAATCACGTACC+AGG | 0.508226 | 7.3:-31291148 | MS.gene036937:CDS |
| ATATCATATGCAGGCTAGGT+TGG | 0.514515 | 7.3:-31288252 | MS.gene036937:intron |
| CGATCTGTTACTGAAAGAAA+AGG | 0.515874 | 7.3:-31287442 | MS.gene036937:intron |
| AATAATGTGGACATTGGGGT+TGG | 0.521321 | 7.3:-31291353 | MS.gene036937:CDS |
| AGCAAAGTGTGACTGTGGAT+TGG | 0.521937 | 7.3:-31290584 | MS.gene036937:CDS |
| TGATATTCACATGCAGAAAG+AGG | 0.522084 | 7.3:-31289134 | MS.gene036937:intron |
| CCACATGCTATGTGTTGAGC+TGG | 0.524467 | 7.3:-31284590 | MS.gene036937:CDS |
| TTCACAGGATGCTTCTGCAA+AGG | 0.524514 | 7.3:-31285185 | MS.gene036937:intron |
| GGAAGCATCGGTATGCTACA+AGG | 0.525354 | 7.3:-31285864 | MS.gene036937:CDS |
| TAATCTGGTAAATGATGCTA+AGG | 0.527851 | 7.3:-31290826 | MS.gene036937:CDS |
| AAATCTGTTACTGAATGAAA+AGG | 0.529503 | 7.3:-31288219 | MS.gene036937:intron |
| TGTAAGAGATCTACAGCTGC+AGG | 0.532039 | 7.3:-31284320 | MS.gene036937:CDS |
| TCCGCAAATTCGATTGTGCA+TGG | 0.532641 | 7.3:-31291071 | MS.gene036937:CDS |
| GAGACTGCGACAAATTCGAT+TGG | 0.534345 | 7.3:-31290690 | MS.gene036937:CDS |
| ATTCACAAGATTTAGATCCC+TGG | 0.534586 | 7.3:+31290743 | None:intergenic |
| CATCGGTATGCTACAAGGGC+AGG | 0.537653 | 7.3:-31285859 | MS.gene036937:intron |
| GCGACAAATTCGATTGGGAA+TGG | 0.538570 | 7.3:-31290684 | MS.gene036937:CDS |
| AGGTGTTGGTAAATTCAAAT+GGG | 0.539735 | 7.3:-31290782 | MS.gene036937:CDS |
| AATCGAATTTGCGGAAACCT+CGG | 0.539932 | 7.3:+31291079 | None:intergenic |
| TGATACACACATTCATAAAG+AGG | 0.540697 | 7.3:-31288830 | MS.gene036937:intron |
| TCAGATGATTCGGGTTCAGA+TGG | 0.541087 | 7.3:+31284499 | None:intergenic |
| AACCAATGGAGTCGGCCGAC+GGG | 0.541820 | 7.3:-31290494 | MS.gene036937:CDS |
| CAACCAATGGAGTCGGCCGA+CGG | 0.544690 | 7.3:-31290495 | MS.gene036937:CDS |
| GAATTTGATGAGTAATGGTA+AGG | 0.545570 | 7.3:-31291309 | MS.gene036937:CDS |
| GATCAGAATTTGATGAGTAA+TGG | 0.545882 | 7.3:-31291314 | MS.gene036937:CDS |
| GGGCGAGCCTGCTCAACCAA+TGG | 0.548138 | 7.3:-31290508 | MS.gene036937:CDS |
| AAATCTAATGAATAATGGTA+AGG | 0.549311 | 7.3:-31291027 | MS.gene036937:CDS |
| ATATCATATGCAGGCTGGAT+CGG | 0.551335 | 7.3:-31287475 | MS.gene036937:intron |
| AAATGCTGAACTTGTTGAGA+AGG | 0.553493 | 7.3:-31284768 | MS.gene036937:intron |
| TGATATGCATGCTAAGAAAG+AGG | 0.554087 | 7.3:-31289283 | MS.gene036937:intron |
| AGACTGCGACAAATTCGATT+GGG | 0.554135 | 7.3:-31290689 | MS.gene036937:CDS |
| GGGGATCATAATCTGGTGAA+TGG | 0.555359 | 7.3:-31291224 | MS.gene036937:CDS |
| TAAGAATAATGTGGACATTG+GGG | 0.557410 | 7.3:-31291357 | MS.gene036937:CDS |
| TTTATTGATAATCTCTTCCG+TGG | 0.557896 | 7.3:+31288652 | None:intergenic |
| TCATATGCAGGCTAGGTTGG+CGG | 0.560785 | 7.3:-31288249 | MS.gene036937:intron |
| TGCATGGAGAGACAGACGCC+AGG | 0.562553 | 7.3:-31291055 | MS.gene036937:CDS |
| GGAATGGAGAAATAGGTACC+TGG | 0.562815 | 7.3:-31290668 | MS.gene036937:CDS |
| TCTGAAGTTACTGGACCTGA+TGG | 0.568507 | 7.3:-31284541 | MS.gene036937:CDS |
| GTTGAAATCTCAAATTGAAG+AGG | 0.568858 | 7.3:-31284822 | MS.gene036937:CDS |
| GCCTGCTCAACCAATGGAGT+CGG | 0.570341 | 7.3:-31290502 | MS.gene036937:CDS |
| AATTTGGTGAAAAGTGGAGA+GGG | 0.570370 | 7.3:-31290528 | MS.gene036937:CDS |
| TGAAGAGGCCTATATGTTGG+TGG | 0.573226 | 7.3:-31284807 | MS.gene036937:CDS |
| GAATCTGGTGAGTAATGGTA+AGG | 0.575005 | 7.3:-31291120 | MS.gene036937:CDS |
| TTGGTAAATTCAAATGGGTA+CGG | 0.576072 | 7.3:-31290777 | MS.gene036937:CDS |
| AATACTAATATGGATTCCAA+TGG | 0.576511 | 7.3:-31290468 | MS.gene036937:CDS |
| GTTGTCCCCAAAAGCTGAGT+GGG | 0.578605 | 7.3:+31290612 | None:intergenic |
| AATTGAAGAGGCCTATATGT+TGG | 0.580345 | 7.3:-31284810 | MS.gene036937:CDS |
| TGCAGAAGCATCCTGTGAAG+CGG | 0.580794 | 7.3:+31285189 | None:intergenic |
| GGTTACATCTATATCTGTGC+CGG | 0.582022 | 7.3:-31284476 | MS.gene036937:CDS |
| GGTACGTGATTCTACATCCT+CGG | 0.582548 | 7.3:+31291151 | None:intergenic |
| TAATGAATAATGGTAAGGAT+GGG | 0.585144 | 7.3:-31291022 | MS.gene036937:CDS |
| GATCAGAATCTGGTGAGTAA+TGG | 0.585537 | 7.3:-31291125 | MS.gene036937:CDS |
| TGCTATGCTTATTCAGAGAG+AGG | 0.586263 | 7.3:-31289886 | MS.gene036937:intron |
| GGTGAGTAATGGTAAGGATG+AGG | 0.588985 | 7.3:-31291114 | MS.gene036937:CDS |
| TCAAATCTGAATGGAAGCAT+CGG | 0.592323 | 7.3:-31285876 | MS.gene036937:CDS |
| TGAATTGCAGAAACAAAAGC+AGG | 0.592695 | 7.3:-31288615 | MS.gene036937:intron |
| AGCCTGACAAAGATTAGCCT+CGG | 0.593215 | 7.3:+31290893 | None:intergenic |
| ACTCACCAGATTCTGATCCC+TGG | 0.593483 | 7.3:+31291130 | None:intergenic |
| TGATACACACATTCTTAAAG+GGG | 0.596160 | 7.3:-31289735 | MS.gene036937:intron |
| TTCATTGGAAAAGACTTTGG+TGG | 0.597963 | 7.3:-31284446 | MS.gene036937:CDS |
| TGAACAAGTTAATCTTTCTG+AGG | 0.603127 | 7.3:-31290802 | MS.gene036937:CDS |
| GCAAGTTAGTAGTATTTCTG+AGG | 0.605176 | 7.3:-31291189 | MS.gene036937:CDS |
| TCATATGCAGGCTGGATCGG+TGG | 0.609027 | 7.3:-31287472 | MS.gene036937:intron |
| CGGGGTGGTGAAACAGGTAA+CGG | 0.613035 | 7.3:-31291245 | MS.gene036937:CDS |
| GCTGCAGGATACCGAGAATG+TGG | 0.615133 | 7.3:-31284305 | MS.gene036937:CDS |
| CAAGCAAAATAAGAATAATG+TGG | 0.615458 | 7.3:-31291366 | MS.gene036937:CDS |
| GAATTTGGTGAAAAGTGGAG+AGG | 0.618401 | 7.3:-31290529 | MS.gene036937:CDS |
| GAATCTGGTGAATGATGCTA+AGG | 0.618922 | 7.3:-31290640 | MS.gene036937:CDS |
| ATTCACCAGATTCTGATCCC+AGG | 0.621903 | 7.3:+31290650 | None:intergenic |
| TGAGCTGGATCGACCAGACA+CGG | 0.625329 | 7.3:-31284575 | MS.gene036937:CDS |
| TAATCTGGTGAATGGTGCTA+AGG | 0.626795 | 7.3:-31291216 | MS.gene036937:CDS |
| ATCTGAACCCGAATCATCTG+AGG | 0.631659 | 7.3:-31284497 | MS.gene036937:CDS |
| CGTTATGCAGGCCAAAGCAG+AGG | 0.634069 | 7.3:-31288881 | MS.gene036937:intron |
| GCATGCAAGAGATCTACAGC+TGG | 0.634109 | 7.3:-31284392 | MS.gene036937:CDS |
| GAATGGAGAAATAGGTACCT+GGG | 0.634175 | 7.3:-31290667 | MS.gene036937:CDS |
| TGTGGATTGGAATGGAGATG+TGG | 0.635509 | 7.3:-31290571 | MS.gene036937:CDS |
| GGACATGCATGTGCAAAAGG+AGG | 0.637104 | 7.3:-31289446 | MS.gene036937:intron |
| TGAACAAGTTAATCTTTCCG+AGG | 0.644024 | 7.3:-31290910 | MS.gene036937:CDS |
| TCATCCTCAGCATTAGTCAG+CGG | 0.648919 | 7.3:+31290930 | None:intergenic |
| CTTACATCATTATCATCCAG+TGG | 0.651961 | 7.3:+31284337 | None:intergenic |
| GCATGGAGAGACAGACGCCA+GGG | 0.652193 | 7.3:-31291054 | MS.gene036937:CDS |
| GAAGCATCGGTATGCTACAA+GGG | 0.654082 | 7.3:-31285863 | MS.gene036937:CDS |
| GGTACGGAGAAACTTCAACC+AGG | 0.660734 | 7.3:-31290761 | MS.gene036937:CDS |
| CCAGCTCAACACATAGCATG+TGG | 0.661927 | 7.3:+31284590 | None:intergenic |
| AGTGTGACTGTGGATTGGAA+TGG | 0.662406 | 7.3:-31290579 | MS.gene036937:CDS |
| TGATGGAGCATCTGGTACCG+TGG | 0.663334 | 7.3:-31290961 | MS.gene036937:CDS |
| AGTTGTCCCCAAAAGCTGAG+TGG | 0.672502 | 7.3:+31290611 | None:intergenic |
| GGCTGTGCCAAATTCTACCG+AGG | 0.672995 | 7.3:-31291168 | MS.gene036937:CDS |
| TGATAAGCAAAGTGTGACTG+TGG | 0.674123 | 7.3:-31290589 | MS.gene036937:CDS |
| GGATGTAGAATCACGTACCA+GGG | 0.676411 | 7.3:-31291147 | MS.gene036937:CDS |
| TAATCCGCTGACTAATGCTG+AGG | 0.684098 | 7.3:-31290934 | MS.gene036937:CDS |
| GTACGGAGAAACTTCAACCA+GGG | 0.684249 | 7.3:-31290760 | MS.gene036937:CDS |
| GATGGAGAAATAGGTAACAG+AGG | 0.687770 | 7.3:-31290852 | MS.gene036937:CDS |
| GGGTGGTGAAACAGGTAACG+GGG | 0.689587 | 7.3:-31291243 | MS.gene036937:CDS |
| AGTCAGCGGATTATGATCCA+CGG | 0.696359 | 7.3:+31290944 | None:intergenic |
| TGAGGATGCTAGTCTCTCCG+AGG | 0.729972 | 7.3:-31291096 | MS.gene036937:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 31284174 | 31291432 | 31284174 | ID=MS.gene036937 |
| chr7.3 | mRNA | 31284174 | 31291432 | 31284174 | ID=MS.gene036937.t1;Parent=MS.gene036937 |
| chr7.3 | exon | 31290443 | 31291432 | 31290443 | ID=MS.gene036937.t1.exon1;Parent=MS.gene036937.t1 |
| chr7.3 | CDS | 31290443 | 31291432 | 31290443 | ID=cds.MS.gene036937.t1;Parent=MS.gene036937.t1 |
| chr7.3 | exon | 31289887 | 31289949 | 31289887 | ID=MS.gene036937.t1.exon2;Parent=MS.gene036937.t1 |
| chr7.3 | CDS | 31289887 | 31289949 | 31289887 | ID=cds.MS.gene036937.t1;Parent=MS.gene036937.t1 |
| chr7.3 | exon | 31289736 | 31289798 | 31289736 | ID=MS.gene036937.t1.exon3;Parent=MS.gene036937.t1 |
| chr7.3 | CDS | 31289736 | 31289798 | 31289736 | ID=cds.MS.gene036937.t1;Parent=MS.gene036937.t1 |
| chr7.3 | exon | 31289583 | 31289645 | 31289583 | ID=MS.gene036937.t1.exon4;Parent=MS.gene036937.t1 |
| chr7.3 | CDS | 31289583 | 31289645 | 31289583 | ID=cds.MS.gene036937.t1;Parent=MS.gene036937.t1 |
| chr7.3 | exon | 31289447 | 31289509 | 31289447 | ID=MS.gene036937.t1.exon5;Parent=MS.gene036937.t1 |
| chr7.3 | CDS | 31289447 | 31289509 | 31289447 | ID=cds.MS.gene036937.t1;Parent=MS.gene036937.t1 |
| chr7.3 | exon | 31289284 | 31289346 | 31289284 | ID=MS.gene036937.t1.exon6;Parent=MS.gene036937.t1 |
| chr7.3 | CDS | 31289284 | 31289346 | 31289284 | ID=cds.MS.gene036937.t1;Parent=MS.gene036937.t1 |
| chr7.3 | exon | 31289135 | 31289197 | 31289135 | ID=MS.gene036937.t1.exon7;Parent=MS.gene036937.t1 |
| chr7.3 | CDS | 31289135 | 31289197 | 31289135 | ID=cds.MS.gene036937.t1;Parent=MS.gene036937.t1 |
| chr7.3 | exon | 31288831 | 31288893 | 31288831 | ID=MS.gene036937.t1.exon8;Parent=MS.gene036937.t1 |
| chr7.3 | CDS | 31288831 | 31288893 | 31288831 | ID=cds.MS.gene036937.t1;Parent=MS.gene036937.t1 |
| chr7.3 | exon | 31288616 | 31288678 | 31288616 | ID=MS.gene036937.t1.exon9;Parent=MS.gene036937.t1 |
| chr7.3 | CDS | 31288616 | 31288678 | 31288616 | ID=cds.MS.gene036937.t1;Parent=MS.gene036937.t1 |
| chr7.3 | exon | 31288365 | 31288427 | 31288365 | ID=MS.gene036937.t1.exon10;Parent=MS.gene036937.t1 |
| chr7.3 | CDS | 31288365 | 31288427 | 31288365 | ID=cds.MS.gene036937.t1;Parent=MS.gene036937.t1 |
| chr7.3 | exon | 31288220 | 31288261 | 31288220 | ID=MS.gene036937.t1.exon11;Parent=MS.gene036937.t1 |
| chr7.3 | CDS | 31288220 | 31288261 | 31288220 | ID=cds.MS.gene036937.t1;Parent=MS.gene036937.t1 |
| chr7.3 | exon | 31288008 | 31288049 | 31288008 | ID=MS.gene036937.t1.exon12;Parent=MS.gene036937.t1 |
| chr7.3 | CDS | 31288008 | 31288049 | 31288008 | ID=cds.MS.gene036937.t1;Parent=MS.gene036937.t1 |
| chr7.3 | exon | 31287774 | 31287836 | 31287774 | ID=MS.gene036937.t1.exon13;Parent=MS.gene036937.t1 |
| chr7.3 | CDS | 31287774 | 31287836 | 31287774 | ID=cds.MS.gene036937.t1;Parent=MS.gene036937.t1 |
| chr7.3 | exon | 31287443 | 31287484 | 31287443 | ID=MS.gene036937.t1.exon14;Parent=MS.gene036937.t1 |
| chr7.3 | CDS | 31287443 | 31287484 | 31287443 | ID=cds.MS.gene036937.t1;Parent=MS.gene036937.t1 |
| chr7.3 | exon | 31287210 | 31287272 | 31287210 | ID=MS.gene036937.t1.exon15;Parent=MS.gene036937.t1 |
| chr7.3 | CDS | 31287210 | 31287272 | 31287210 | ID=cds.MS.gene036937.t1;Parent=MS.gene036937.t1 |
| chr7.3 | exon | 31287036 | 31287098 | 31287036 | ID=MS.gene036937.t1.exon16;Parent=MS.gene036937.t1 |
| chr7.3 | CDS | 31287036 | 31287098 | 31287036 | ID=cds.MS.gene036937.t1;Parent=MS.gene036937.t1 |
| chr7.3 | exon | 31286872 | 31286934 | 31286872 | ID=MS.gene036937.t1.exon17;Parent=MS.gene036937.t1 |
| chr7.3 | CDS | 31286872 | 31286934 | 31286872 | ID=cds.MS.gene036937.t1;Parent=MS.gene036937.t1 |
| chr7.3 | exon | 31286657 | 31286719 | 31286657 | ID=MS.gene036937.t1.exon18;Parent=MS.gene036937.t1 |
| chr7.3 | CDS | 31286657 | 31286719 | 31286657 | ID=cds.MS.gene036937.t1;Parent=MS.gene036937.t1 |
| chr7.3 | exon | 31285860 | 31285919 | 31285860 | ID=MS.gene036937.t1.exon19;Parent=MS.gene036937.t1 |
| chr7.3 | CDS | 31285860 | 31285919 | 31285860 | ID=cds.MS.gene036937.t1;Parent=MS.gene036937.t1 |
| chr7.3 | exon | 31285186 | 31285323 | 31285186 | ID=MS.gene036937.t1.exon20;Parent=MS.gene036937.t1 |
| chr7.3 | CDS | 31285186 | 31285323 | 31285186 | ID=cds.MS.gene036937.t1;Parent=MS.gene036937.t1 |
| chr7.3 | exon | 31284769 | 31284867 | 31284769 | ID=MS.gene036937.t1.exon21;Parent=MS.gene036937.t1 |
| chr7.3 | CDS | 31284769 | 31284867 | 31284769 | ID=cds.MS.gene036937.t1;Parent=MS.gene036937.t1 |
| chr7.3 | exon | 31284174 | 31284614 | 31284174 | ID=MS.gene036937.t1.exon22;Parent=MS.gene036937.t1 |
| chr7.3 | CDS | 31284174 | 31284614 | 31284174 | ID=cds.MS.gene036937.t1;Parent=MS.gene036937.t1 |
| Gene Sequence |
| Protein sequence |
