Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007461.t1 | XP_003625583.1 | 93 | 611 | 42 | 1 | 1 | 611 | 1 | 610 | 1.60E-230 | 808.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007461.t1 | Q9ZQC5 | 36.2 | 625 | 339 | 7 | 1 | 609 | 1 | 581 | 2.4e-57 | 224.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007461.t1 | G7L1R0 | 93.0 | 611 | 42 | 1 | 1 | 611 | 1 | 610 | 1.2e-230 | 808.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene03912 | MS.gene007461 | PPI |
| MS.gene26785 | MS.gene007461 | PPI |
| MS.gene007461 | MS.gene31961 | PPI |
| MS.gene007461 | MS.gene037356 | PPI |
| MS.gene007461 | MS.gene56986 | PPI |
| MS.gene007461 | MS.gene065074 | PPI |
| MS.gene007461 | MS.gene39229 | PPI |
| MS.gene007461 | MS.gene76250 | PPI |
| MS.gene007461 | MS.gene029217 | PPI |
| MS.gene007461 | MS.gene063692 | PPI |
| MS.gene007461 | MS.gene39455 | PPI |
| MS.gene020474 | MS.gene007461 | PPI |
| MS.gene007461 | MS.gene029219 | PPI |
| MS.gene31930 | MS.gene007461 | PPI |
| MS.gene007461 | MS.gene68625 | PPI |
| MS.gene030154 | MS.gene007461 | PPI |
| MS.gene007461 | MS.gene008635 | PPI |
| MS.gene007461 | MS.gene015702 | PPI |
| MS.gene007461 | MS.gene034650 | PPI |
| MS.gene007461 | MS.gene064148 | PPI |
| MS.gene54155 | MS.gene007461 | PPI |
| MS.gene007461 | MS.gene57038 | PPI |
| MS.gene23912 | MS.gene007461 | PPI |
| MS.gene007461 | MS.gene93135 | PPI |
| MS.gene007461 | MS.gene009801 | PPI |
| MS.gene007461 | MS.gene05775 | PPI |
| MS.gene50208 | MS.gene007461 | PPI |
| MS.gene33795 | MS.gene007461 | PPI |
| MS.gene007461 | MS.gene048551 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007461.t1 | MTR_7g100730 | 95.090 | 611 | 29 | 1 | 1 | 611 | 1 | 610 | 0.0 | 1066 |
| MS.gene007461.t1 | MTR_1g066850 | 61.156 | 623 | 193 | 7 | 1 | 611 | 1 | 586 | 0.0 | 638 |
| MS.gene007461.t1 | MTR_7g061150 | 95.604 | 364 | 15 | 1 | 248 | 611 | 1 | 363 | 0.0 | 636 |
| MS.gene007461.t1 | MTR_4g461060 | 44.833 | 629 | 314 | 7 | 1 | 608 | 1 | 617 | 1.93e-145 | 435 |
| MS.gene007461.t1 | MTR_4g461060 | 46.021 | 578 | 283 | 5 | 51 | 608 | 46 | 614 | 2.62e-142 | 427 |
| MS.gene007461.t1 | MTR_2g093260 | 41.232 | 422 | 218 | 9 | 195 | 608 | 83 | 482 | 1.54e-70 | 236 |
| MS.gene007461.t1 | MTR_2g093240 | 42.857 | 112 | 30 | 2 | 499 | 610 | 3 | 80 | 2.10e-17 | 77.8 |
| MS.gene007461.t1 | MTR_2g093250 | 45.098 | 102 | 52 | 2 | 309 | 410 | 112 | 209 | 2.89e-14 | 73.2 |
| MS.gene007461.t1 | MTR_5g007350 | 28.107 | 338 | 178 | 12 | 3 | 305 | 22 | 329 | 3.20e-12 | 70.1 |
| MS.gene007461.t1 | MTR_4g478190 | 27.124 | 306 | 193 | 11 | 11 | 290 | 11 | 312 | 5.40e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007461.t1 | AT2G37080 | 48.418 | 632 | 252 | 14 | 1 | 610 | 1 | 580 | 9.50e-161 | 473 |
| MS.gene007461.t1 | AT2G37080 | 48.265 | 634 | 252 | 15 | 1 | 610 | 1 | 582 | 7.24e-159 | 468 |
| MS.gene007461.t1 | AT2G37080 | 48.265 | 634 | 252 | 15 | 1 | 610 | 1 | 582 | 7.24e-159 | 468 |
| MS.gene007461.t1 | AT5G60210 | 39.448 | 616 | 310 | 10 | 1 | 608 | 1 | 561 | 5.47e-108 | 336 |
| MS.gene007461.t1 | AT5G60210 | 39.448 | 616 | 310 | 10 | 1 | 608 | 1 | 561 | 5.47e-108 | 336 |
| MS.gene007461.t1 | AT5G60210 | 39.448 | 616 | 310 | 10 | 1 | 608 | 1 | 561 | 5.47e-108 | 336 |
| MS.gene007461.t1 | AT5G60210 | 39.448 | 616 | 310 | 10 | 1 | 608 | 1 | 561 | 5.47e-108 | 336 |
| MS.gene007461.t1 | AT5G60210 | 38.789 | 611 | 311 | 10 | 6 | 608 | 30 | 585 | 4.50e-104 | 327 |
| MS.gene007461.t1 | AT5G60210 | 38.789 | 611 | 311 | 10 | 6 | 608 | 30 | 585 | 4.50e-104 | 327 |
| MS.gene007461.t1 | AT3G53350 | 38.655 | 357 | 171 | 15 | 1 | 336 | 1 | 330 | 8.43e-46 | 167 |
| MS.gene007461.t1 | AT3G53350 | 36.415 | 357 | 103 | 12 | 261 | 610 | 154 | 393 | 6.91e-36 | 139 |
| MS.gene007461.t1 | AT3G53350 | 38.655 | 357 | 171 | 15 | 1 | 336 | 1 | 330 | 8.43e-46 | 167 |
| MS.gene007461.t1 | AT3G53350 | 36.415 | 357 | 103 | 12 | 261 | 610 | 154 | 393 | 6.91e-36 | 139 |
| MS.gene007461.t1 | AT3G53350 | 38.440 | 359 | 171 | 16 | 1 | 336 | 1 | 332 | 6.47e-44 | 162 |
| MS.gene007461.t1 | AT3G53350 | 32.704 | 477 | 182 | 15 | 145 | 610 | 47 | 395 | 2.78e-36 | 140 |
| MS.gene007461.t1 | AT3G53350 | 38.440 | 359 | 171 | 16 | 1 | 336 | 1 | 332 | 6.47e-44 | 162 |
| MS.gene007461.t1 | AT3G53350 | 32.704 | 477 | 182 | 15 | 145 | 610 | 47 | 395 | 2.78e-36 | 140 |
| MS.gene007461.t1 | AT3G53350 | 38.440 | 359 | 171 | 16 | 1 | 336 | 1 | 332 | 6.47e-44 | 162 |
| MS.gene007461.t1 | AT3G53350 | 32.704 | 477 | 182 | 15 | 145 | 610 | 47 | 395 | 2.78e-36 | 140 |
| MS.gene007461.t1 | AT3G53350 | 37.892 | 351 | 170 | 15 | 7 | 336 | 18 | 341 | 2.64e-41 | 155 |
| MS.gene007461.t1 | AT3G53350 | 35.955 | 356 | 106 | 11 | 261 | 610 | 165 | 404 | 1.52e-35 | 139 |
| MS.gene007461.t1 | AT3G53350 | 35.659 | 387 | 171 | 16 | 1 | 336 | 1 | 360 | 1.34e-39 | 150 |
| MS.gene007461.t1 | AT3G53350 | 35.955 | 356 | 106 | 11 | 261 | 610 | 184 | 423 | 4.03e-35 | 138 |
| MS.gene007461.t1 | AT3G53350 | 37.677 | 353 | 170 | 16 | 7 | 336 | 18 | 343 | 1.44e-39 | 150 |
| MS.gene007461.t1 | AT3G53350 | 32.773 | 476 | 183 | 15 | 145 | 610 | 58 | 406 | 8.18e-36 | 139 |
| MS.gene007461.t1 | AT3G53350 | 37.677 | 353 | 170 | 16 | 7 | 336 | 18 | 343 | 1.44e-39 | 150 |
| MS.gene007461.t1 | AT3G53350 | 32.773 | 476 | 183 | 15 | 145 | 610 | 58 | 406 | 8.18e-36 | 139 |
| MS.gene007461.t1 | AT1G78430 | 35.294 | 170 | 97 | 4 | 440 | 608 | 163 | 320 | 4.35e-16 | 80.1 |
| MS.gene007461.t1 | AT1G17140 | 35.028 | 177 | 95 | 7 | 440 | 608 | 176 | 340 | 1.17e-13 | 73.2 |
| MS.gene007461.t1 | AT1G17140 | 35.028 | 177 | 95 | 7 | 440 | 608 | 176 | 340 | 1.17e-13 | 73.2 |
Find 117 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTTCCTTTGGGACATTTC+TGG | 0.157878 | 7.3:-12191768 | None:intergenic |
| CAGGAAAATGAGGAGATAAA+TGG | 0.230127 | 7.3:+12193341 | MS.gene007461:CDS |
| TCACGAGCTTTAGAAGTAAT+TGG | 0.259559 | 7.3:+12193131 | MS.gene007461:CDS |
| TACAATCTTTACCTTGCTTT+TGG | 0.268708 | 7.3:-12191163 | None:intergenic |
| GTCTGATCATGCTCAGATTC+AGG | 0.282526 | 7.3:+12193028 | MS.gene007461:CDS |
| TCATCTGTGTCTTCTAAATA+AGG | 0.285675 | 7.3:-12194157 | None:intergenic |
| CAGAGTTGGAAGCCGAATTA+AGG | 0.288025 | 7.3:+12193984 | MS.gene007461:CDS |
| CAATTTATGTATTTCATTCA+TGG | 0.304232 | 7.3:-12192949 | None:intergenic |
| GTTTCAAATACCTCAGATAT+TGG | 0.308574 | 7.3:-12191933 | None:intergenic |
| GGTATCTTTCTTATGGGGTT+TGG | 0.312528 | 7.3:-12191864 | None:intergenic |
| TTGTAGCAGGTGATTTCCTT+TGG | 0.322465 | 7.3:-12191779 | None:intergenic |
| AACTTTCAATCTCCTTAATT+CGG | 0.325865 | 7.3:-12193996 | None:intergenic |
| ACTTTCGGACTCATGTCTTT+TGG | 0.331128 | 7.3:-12191885 | None:intergenic |
| AATCCATTGAGTGCTGCTTT+TGG | 0.335138 | 7.3:-12192908 | None:intergenic |
| CAACTGCTCTACTTCAGATT+TGG | 0.349820 | 7.3:-12193387 | None:intergenic |
| GACTAGCAAGGTTCAGGAAT+TGG | 0.351633 | 7.3:+12192632 | MS.gene007461:CDS |
| AACCTGCGTTCGTTTACTTT+CGG | 0.363041 | 7.3:-12191900 | None:intergenic |
| TAGTGAAGCTATCTCTGTTA+TGG | 0.380107 | 7.3:+12193067 | MS.gene007461:CDS |
| TTCTTGAAGTCGTGCTTCTT+CGG | 0.385930 | 7.3:-12192829 | None:intergenic |
| TATCCTCAAGATGGAGATAA+AGG | 0.393747 | 7.3:+12193790 | MS.gene007461:CDS |
| GAAGCGGACTAGCAAGGTTC+AGG | 0.395117 | 7.3:+12192626 | MS.gene007461:CDS |
| CAGAGTTTGGTGTCTTCAAC+TGG | 0.396120 | 7.3:-12191818 | None:intergenic |
| TTCTAATCTGCAATGTGCTC+TGG | 0.400148 | 7.3:-12193457 | None:intergenic |
| TTGGGACATTTCTGGAGCAT+TGG | 0.409864 | 7.3:-12191760 | None:intergenic |
| TGGCAAAATGCAAATGCAAT+TGG | 0.415697 | 7.3:+12193151 | MS.gene007461:CDS |
| GTTGTTAGTCTGAGAAAATT+CGG | 0.416762 | 7.3:-12193000 | None:intergenic |
| TGTAGCAGGTGATTTCCTTT+GGG | 0.418456 | 7.3:-12191778 | None:intergenic |
| TAGAAGTGCTTACGAACAAC+TGG | 0.419369 | 7.3:+12193475 | MS.gene007461:CDS |
| CTGAGAAAGTCCCTTTCCAT+TGG | 0.424088 | 7.3:-12193321 | None:intergenic |
| GACAAAACTTAGCTATGTAA+TGG | 0.430384 | 7.3:+12193889 | MS.gene007461:CDS |
| CTCAATGGATTCATCTGCTC+TGG | 0.431947 | 7.3:+12192920 | MS.gene007461:CDS |
| TACTTCTAAAGCTCGTGATT+CGG | 0.433669 | 7.3:-12193126 | None:intergenic |
| TCTTATGGGGTTTGGTGAGG+AGG | 0.433762 | 7.3:-12191856 | None:intergenic |
| GCCGAGTTAGAACCAGAGTT+TGG | 0.447004 | 7.3:-12191831 | None:intergenic |
| CAATGGAAAGGGACTTTCTC+AGG | 0.447323 | 7.3:+12193322 | MS.gene007461:CDS |
| TTCCTCTTGGTATCTTATCT+CGG | 0.450936 | 7.3:-12193429 | None:intergenic |
| AGGAAAATGAGGAGATAAAT+GGG | 0.455434 | 7.3:+12193342 | MS.gene007461:CDS |
| CGAACAGCTAGATGCTGCTC+AGG | 0.462034 | 7.3:+12193952 | MS.gene007461:CDS |
| ATCTCAATTGCTGAGTTTGT+CGG | 0.465945 | 7.3:+12193604 | MS.gene007461:CDS |
| TATGGGGTTTGGTGAGGAGG+AGG | 0.467777 | 7.3:-12191853 | None:intergenic |
| CTTTCTTATGGGGTTTGGTG+AGG | 0.468528 | 7.3:-12191859 | None:intergenic |
| AAAATCTCAAGCAAAATCCT+TGG | 0.473358 | 7.3:+12193265 | MS.gene007461:CDS |
| TGCTCTGGATGTATTCCTCT+TGG | 0.476597 | 7.3:-12193442 | None:intergenic |
| CTGAATTATACGAGGAATTG+AGG | 0.480140 | 7.3:+12193531 | MS.gene007461:CDS |
| AACAGCAAGGGCTGCAGAGA+AGG | 0.483686 | 7.3:+12193859 | MS.gene007461:CDS |
| GAGTTTGTCGGCGGAGAATG+AGG | 0.485321 | 7.3:+12193616 | MS.gene007461:CDS |
| AAAAGCAAGCCTGATGGAAA+AGG | 0.487342 | 7.3:+12193580 | MS.gene007461:CDS |
| AGAACTCAGTAAAATATCTC+AGG | 0.492404 | 7.3:+12192848 | MS.gene007461:CDS |
| CTGAGCAGCATCTAGCTGTT+CGG | 0.497006 | 7.3:-12193951 | None:intergenic |
| CTTTCTACCACCGGAAACAA+TGG | 0.502144 | 7.3:+12194064 | MS.gene007461:CDS |
| TAATTCAGCCTCTCTCTCAC+TGG | 0.507829 | 7.3:-12193516 | None:intergenic |
| AAGTCGTGCTTCTTCGGAAG+CGG | 0.510056 | 7.3:-12192823 | None:intergenic |
| ATGAAAAGCGATCTACTGAC+AGG | 0.512449 | 7.3:+12193657 | MS.gene007461:CDS |
| TTCAACTGGCGAGCAGTTCG+AGG | 0.516234 | 7.3:-12191804 | None:intergenic |
| ATCTCAAGCAAAATCCTTGG+AGG | 0.518596 | 7.3:+12193268 | MS.gene007461:CDS |
| CTTGACACTGATTCAACCAA+TGG | 0.522965 | 7.3:+12193305 | MS.gene007461:CDS |
| AACTTAACTCATCGGAGTCA+TGG | 0.524619 | 7.3:+12192703 | MS.gene007461:CDS |
| CAAGATGGAGATAAAGGAGT+TGG | 0.532655 | 7.3:+12193796 | MS.gene007461:CDS |
| ACTGTCCCTGTCAAAAGAGC+TGG | 0.533173 | 7.3:+12192770 | MS.gene007461:CDS |
| GCAGTTCGAGGAGTTGTAGC+AGG | 0.533468 | 7.3:-12191792 | None:intergenic |
| GGGACTTTCTCAGGAAAATG+AGG | 0.534716 | 7.3:+12193331 | MS.gene007461:CDS |
| AGAAAACAGTATCCTCAAGA+TGG | 0.537638 | 7.3:+12193781 | MS.gene007461:CDS |
| AGAGCAGTTGAAATCTGCAT+TGG | 0.538094 | 7.3:+12193400 | MS.gene007461:CDS |
| TGTCCAAAAGCAGCACTCAA+TGG | 0.543706 | 7.3:+12192905 | MS.gene007461:CDS |
| GACAGTGGAGACACTCCAAT+CGG | 0.544738 | 7.3:+12193187 | MS.gene007461:CDS |
| CACTGAAGAGGCTGTTGAGT+CGG | 0.545865 | 7.3:+12193832 | MS.gene007461:CDS |
| ATCAGAATCCAGTGAGAGAG+AGG | 0.548200 | 7.3:+12193508 | MS.gene007461:CDS |
| ACTGATTCAACCAATGGAAA+GGG | 0.548724 | 7.3:+12193311 | MS.gene007461:CDS |
| GGAAACAATGGAAAATGTGT+AGG | 0.557199 | 7.3:+12194076 | MS.gene007461:CDS |
| AGTTTGTCGGCGGAGAATGA+GGG | 0.561099 | 7.3:+12193617 | MS.gene007461:CDS |
| CACTGATTCAACCAATGGAA+AGG | 0.561480 | 7.3:+12193310 | MS.gene007461:CDS |
| ATGCTCAGATTCAGGACTTG+AGG | 0.568384 | 7.3:+12193036 | MS.gene007461:CDS |
| AAGGTCCGAAAACTGTTGAC+GGG | 0.568934 | 7.3:-12192799 | None:intergenic |
| ATGGAAGACAAAAGTTCAAG+AGG | 0.570660 | 7.3:+12192722 | MS.gene007461:CDS |
| GAAACAATGGAAAATGTGTA+GGG | 0.570873 | 7.3:+12194077 | MS.gene007461:CDS |
| TTGTTCCAACTCAAAAGCTA+AGG | 0.572666 | 7.3:-12193240 | None:intergenic |
| AAAGGTCCGAAAACTGTTGA+CGG | 0.573588 | 7.3:-12192800 | None:intergenic |
| ACCAAACTCTGGTTCTAACT+CGG | 0.577387 | 7.3:+12191830 | MS.gene007461:CDS |
| ACTCCTTTATCTCCATCTTG+AGG | 0.578972 | 7.3:-12193793 | None:intergenic |
| GCAGAATAAAATCACTGAAG+AGG | 0.581197 | 7.3:+12193820 | MS.gene007461:CDS |
| GAATTGAGGAAAGCTATAGC+TGG | 0.584443 | 7.3:+12193545 | MS.gene007461:CDS |
| TTTCCTCACAAGTTCCTCCA+AGG | 0.584609 | 7.3:-12193282 | None:intergenic |
| CAGTTGAAGACACCAAACTC+TGG | 0.589837 | 7.3:+12191819 | MS.gene007461:CDS |
| CTCAGGATCGAGATCGTGCA+TGG | 0.590550 | 7.3:+12192865 | MS.gene007461:CDS |
| TCAGGCTGCAAATTCAGAGT+TGG | 0.590572 | 7.3:+12193970 | MS.gene007461:CDS |
| TTAGAAGAAGCGGACTAGCA+AGG | 0.593878 | 7.3:+12192620 | MS.gene007461:intron |
| TAGCTATGTAATGGAAGAAG+CGG | 0.596332 | 7.3:+12193898 | MS.gene007461:CDS |
| TTGAGTCGGTTGAAACAGCA+AGG | 0.601134 | 7.3:+12193846 | MS.gene007461:CDS |
| AGAGCTAAAAGCAAGCCTGA+TGG | 0.601156 | 7.3:+12193574 | MS.gene007461:CDS |
| GTGCTTCTTCGGAAGCGGAA+AGG | 0.601435 | 7.3:-12192818 | None:intergenic |
| AGAAGATCTGAAGAGTGCTA+AGG | 0.601647 | 7.3:+12192677 | MS.gene007461:CDS |
| TAAGGATCAACTTAACTCAT+CGG | 0.603512 | 7.3:+12192695 | MS.gene007461:CDS |
| GCATCTATACTTTCTACCAC+CGG | 0.615034 | 7.3:+12194055 | MS.gene007461:CDS |
| TGCATGGCAATCTGAACTTG+AGG | 0.624261 | 7.3:+12192881 | MS.gene007461:CDS |
| AGAAGATTGGAGTGTTGTGG+AGG | 0.624386 | 7.3:+12194215 | MS.gene007461:CDS |
| GTTTGTCGGCGGAGAATGAG+GGG | 0.630308 | 7.3:+12193618 | MS.gene007461:CDS |
| TTATGCAGACACCAAAAGCA+AGG | 0.637953 | 7.3:+12191152 | None:intergenic |
| TGAAAGTTCAGTCTGATCAG+TGG | 0.639619 | 7.3:+12194011 | MS.gene007461:CDS |
| TCAATTGCTGAGTTTGTCGG+CGG | 0.644952 | 7.3:+12193607 | MS.gene007461:CDS |
| GTGGAGACACTCCAATCGGA+TGG | 0.646462 | 7.3:+12193191 | MS.gene007461:CDS |
| TGATCAGTGGAGAAAAGCAG+CGG | 0.646992 | 7.3:+12194024 | MS.gene007461:CDS |
| ATCACACAGTCCAATATCTG+AGG | 0.647969 | 7.3:+12191923 | MS.gene007461:CDS |
| AATCCTTGGAGGAACTTGTG+AGG | 0.648483 | 7.3:+12193279 | MS.gene007461:CDS |
| TCAGATTCAGGACTTGAGGA+TGG | 0.651660 | 7.3:+12193040 | MS.gene007461:CDS |
| TCAGTGGAGAAAAGCAGCGG+AGG | 0.652899 | 7.3:+12194027 | MS.gene007461:CDS |
| TGAAGAAGATTGGAGTGTTG+TGG | 0.655720 | 7.3:+12194212 | MS.gene007461:CDS |
| GAAGACAAAAGTTCAAGAGG+AGG | 0.660033 | 7.3:+12192725 | MS.gene007461:CDS |
| GGATAAAAGTAACAGAAGAG+TGG | 0.662477 | 7.3:+12193919 | MS.gene007461:CDS |
| TGCCGAGATAAGATACCAAG+AGG | 0.662730 | 7.3:+12193427 | MS.gene007461:CDS |
| ATGCTCCAGAAATGTCCCAA+AGG | 0.664123 | 7.3:+12191763 | MS.gene007461:CDS |
| TGAAAAGCGATCTACTGACA+GGG | 0.672889 | 7.3:+12193658 | MS.gene007461:CDS |
| GTCCGAAAGTAAACGAACGC+AGG | 0.685794 | 7.3:+12191898 | MS.gene007461:CDS |
| GGAAACAGTAAATAAGACAG+TGG | 0.686379 | 7.3:+12193172 | MS.gene007461:CDS |
| AGATTTGGCAGAGATAAGCG+CGG | 0.695807 | 7.3:-12193372 | None:intergenic |
| TGAGTCGGTTGAAACAGCAA+GGG | 0.701089 | 7.3:+12193847 | MS.gene007461:CDS |
| TGGATACTGATGTTGCAGAG+TGG | 0.711923 | 7.3:+12193711 | MS.gene007461:CDS |
| GAGAGAGGCTGAATTATACG+AGG | 0.729149 | 7.3:+12193523 | MS.gene007461:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATTAATCAATTAAGTT+GGG | - | chr7.3:12192096-12192115 | None:intergenic | 10.0% |
| !!! | GATGAATATTAAAAATATTT+TGG | - | chr7.3:12192552-12192571 | None:intergenic | 10.0% |
| !! | AAATATCAAATATAAGCAAA+TGG | - | chr7.3:12192255-12192274 | None:intergenic | 15.0% |
| !! | ATTTGTTTATTTATGCTAAT+TGG | + | chr7.3:12191721-12191740 | MS.gene007461:intron | 15.0% |
| !! | CATAAATTAATCAATTAAGT+TGG | - | chr7.3:12192097-12192116 | None:intergenic | 15.0% |
| !!! | GATTAATTTATGAGTATTTT+TGG | + | chr7.3:12192105-12192124 | MS.gene007461:intron | 15.0% |
| !!! | GTTCGTAAATTTTTTTTTTA+TGG | + | chr7.3:12192474-12192493 | MS.gene007461:intron | 15.0% |
| !! | AAGAGATAATTATTATAACG+AGG | - | chr7.3:12192073-12192092 | None:intergenic | 20.0% |
| !! | ACTAAGAGAAGTTTATTTAA+AGG | - | chr7.3:12191452-12191471 | None:intergenic | 20.0% |
| !! | ACTTGTATAATGTATATGAA+TGG | + | chr7.3:12191590-12191609 | MS.gene007461:intron | 20.0% |
| !! | AGAGATAATTATTATAACGA+GGG | - | chr7.3:12192072-12192091 | None:intergenic | 20.0% |
| !! | AGTAAATGAAACAAAAACAT+TGG | - | chr7.3:12191544-12191563 | None:intergenic | 20.0% |
| !! | ATAATAATAATTGAGTTCAG+AGG | - | chr7.3:12191964-12191983 | None:intergenic | 20.0% |
| !! | CAATTTATGTATTTCATTCA+TGG | - | chr7.3:12192952-12192971 | None:intergenic | 20.0% |
| !! | TAATAATAATTGAGTTCAGA+GGG | - | chr7.3:12191963-12191982 | None:intergenic | 20.0% |
| !! | TGGAATAATAACATTAAATG+TGG | + | chr7.3:12192125-12192144 | MS.gene007461:intron | 20.0% |
| !! | TTTGTTTCATTTACTTAAGT+TGG | + | chr7.3:12191549-12191568 | MS.gene007461:intron | 20.0% |
| !!! | ATGTTTTTGTTTTTCTTCTT+TGG | - | chr7.3:12194190-12194209 | None:intergenic | 20.0% |
| ! | AACTTTCAATCTCCTTAATT+CGG | - | chr7.3:12193999-12194018 | None:intergenic | 25.0% |
| ! | AGTATCTATCAATATCATCA+AGG | - | chr7.3:12192420-12192439 | None:intergenic | 25.0% |
| ! | ATCTTGAATTCATGTGAAAA+CGG | + | chr7.3:12192026-12192045 | MS.gene007461:intron | 25.0% |
| ! | GAGATAATTATTATAACGAG+GGG | - | chr7.3:12192071-12192090 | None:intergenic | 25.0% |
| ! | GATAGATACTTATTGTTTAG+TGG | + | chr7.3:12192430-12192449 | MS.gene007461:intron | 25.0% |
| ! | TATGGAAAAACTAAGAAATG+AGG | + | chr7.3:12193085-12193104 | MS.gene007461:CDS | 25.0% |
| ! | TATTTGAGTCCAACAAATTT+AGG | + | chr7.3:12192270-12192289 | MS.gene007461:intron | 25.0% |
| ! | TGAAATTGTAAAGTTAACTG+TGG | + | chr7.3:12191324-12191343 | MS.gene007461:intron | 25.0% |
| ! | TGTCAAAACAAATTTGTGAA+GGG | + | chr7.3:12191394-12191413 | MS.gene007461:intron | 25.0% |
| ! | TTGTCAAAACAAATTTGTGA+AGG | + | chr7.3:12191393-12191412 | MS.gene007461:intron | 25.0% |
| !! | AAACTTCTCTTAGTTCTTAT+TGG | + | chr7.3:12191458-12191477 | MS.gene007461:intron | 25.0% |
| !! | AACTTCTCTTAGTTCTTATT+GGG | + | chr7.3:12191459-12191478 | MS.gene007461:intron | 25.0% |
| !! | TATTTATGCTAATTGGCTTA+TGG | + | chr7.3:12191728-12191747 | MS.gene007461:intron | 25.0% |
| !! | TCTTTTGGTATCTTTCTTAT+GGG | - | chr7.3:12191873-12191892 | None:intergenic | 25.0% |
| !! | TTATAATGTGTCTCTTTTTC+TGG | + | chr7.3:12192595-12192614 | MS.gene007461:intron | 25.0% |
| !!! | TTCAGTTACTTTTTTCAACT+CGG | - | chr7.3:12193762-12193781 | None:intergenic | 25.0% |
| AAAAACATGCTGAAGAAGAT+TGG | + | chr7.3:12194202-12194221 | MS.gene007461:CDS | 30.0% | |
| AAAATCTCAAGCAAAATCCT+TGG | + | chr7.3:12193265-12193284 | MS.gene007461:CDS | 30.0% | |
| AGAACTCAGTAAAATATCTC+AGG | + | chr7.3:12192848-12192867 | MS.gene007461:CDS | 30.0% | |
| AGGAAAATGAGGAGATAAAT+GGG | + | chr7.3:12193342-12193361 | MS.gene007461:CDS | 30.0% | |
| GAAACAATGGAAAATGTGTA+GGG | + | chr7.3:12194077-12194096 | MS.gene007461:CDS | 30.0% | |
| GACAAAACTTAGCTATGTAA+TGG | + | chr7.3:12193889-12193908 | MS.gene007461:CDS | 30.0% | |
| GTTTCAAATACCTCAGATAT+TGG | - | chr7.3:12191936-12191955 | None:intergenic | 30.0% | |
| TAAGGATCAACTTAACTCAT+CGG | + | chr7.3:12192695-12192714 | MS.gene007461:CDS | 30.0% | |
| TCATCTGTGTCTTCTAAATA+AGG | - | chr7.3:12194160-12194179 | None:intergenic | 30.0% | |
| ! | CTTTTGCTAATAATGTGGAT+GGG | + | chr7.3:12192349-12192368 | MS.gene007461:intron | 30.0% |
| ! | CTTTTGGTATCTTTCTTATG+GGG | - | chr7.3:12191872-12191891 | None:intergenic | 30.0% |
| ! | GTCTTTTGGTATCTTTCTTA+TGG | - | chr7.3:12191874-12191893 | None:intergenic | 30.0% |
| ! | GTTGTTAGTCTGAGAAAATT+CGG | - | chr7.3:12193003-12193022 | None:intergenic | 30.0% |
| ! | TACAATCTTTACCTTGCTTT+TGG | - | chr7.3:12191166-12191185 | None:intergenic | 30.0% |
| ! | TACACATTTTCCATTGTTTC+CGG | - | chr7.3:12194077-12194096 | None:intergenic | 30.0% |
| ! | TCTTTTGCTAATAATGTGGA+TGG | + | chr7.3:12192348-12192367 | MS.gene007461:intron | 30.0% |
| !! | AAAAGAGTGCCTAAATTTGT+TGG | - | chr7.3:12192282-12192301 | None:intergenic | 30.0% |
| ACTTGACATTTAACCCACTT+GGG | + | chr7.3:12192155-12192174 | MS.gene007461:intron | 35.0% | |
| AGAAAACAGTATCCTCAAGA+TGG | + | chr7.3:12193781-12193800 | MS.gene007461:CDS | 35.0% | |
| AGTTAGGAGAATCAATCATC+CGG | - | chr7.3:12191657-12191676 | None:intergenic | 35.0% | |
| ATCTCAATTGCTGAGTTTGT+CGG | + | chr7.3:12193604-12193623 | MS.gene007461:CDS | 35.0% | |
| ATGGAAGACAAAAGTTCAAG+AGG | + | chr7.3:12192722-12192741 | MS.gene007461:CDS | 35.0% | |
| CAAATATAAGCAAATGGCAC+CGG | - | chr7.3:12192249-12192268 | None:intergenic | 35.0% | |
| CAGGAAAATGAGGAGATAAA+TGG | + | chr7.3:12193341-12193360 | MS.gene007461:CDS | 35.0% | |
| CTGAATTATACGAGGAATTG+AGG | + | chr7.3:12193531-12193550 | MS.gene007461:CDS | 35.0% | |
| GCAGAATAAAATCACTGAAG+AGG | + | chr7.3:12193820-12193839 | MS.gene007461:CDS | 35.0% | |
| GGAAAATGTGTAGGGAAAAA+CGG | + | chr7.3:12194085-12194104 | MS.gene007461:CDS | 35.0% | |
| GGAAACAATGGAAAATGTGT+AGG | + | chr7.3:12194076-12194095 | MS.gene007461:CDS | 35.0% | |
| GGAAACAGTAAATAAGACAG+TGG | + | chr7.3:12193172-12193191 | MS.gene007461:CDS | 35.0% | |
| GGATAAAAGTAACAGAAGAG+TGG | + | chr7.3:12193919-12193938 | MS.gene007461:CDS | 35.0% | |
| TACTTGACATTTAACCCACT+TGG | + | chr7.3:12192154-12192173 | MS.gene007461:intron | 35.0% | |
| TAGTGAAGCTATCTCTGTTA+TGG | + | chr7.3:12193067-12193086 | MS.gene007461:CDS | 35.0% | |
| TATATGAATGGCGCTGTAAA+CGG | + | chr7.3:12191602-12191621 | MS.gene007461:intron | 35.0% | |
| TATCCTCAAGATGGAGATAA+AGG | + | chr7.3:12193790-12193809 | MS.gene007461:CDS | 35.0% | |
| TGCTGCAGAACTCAAAAAAA+TGG | + | chr7.3:12193691-12193710 | MS.gene007461:CDS | 35.0% | |
| TGGCAAAATGCAAATGCAAT+TGG | + | chr7.3:12193151-12193170 | MS.gene007461:CDS | 35.0% | |
| TTCCTCTTGGTATCTTATCT+CGG | - | chr7.3:12193432-12193451 | None:intergenic | 35.0% | |
| TTGATCACTTCAGTGTGTTA+TGG | + | chr7.3:12191676-12191695 | MS.gene007461:intron | 35.0% | |
| TTGTTCCAACTCAAAAGCTA+AGG | - | chr7.3:12193243-12193262 | None:intergenic | 35.0% | |
| ! | ACTGATTCAACCAATGGAAA+GGG | + | chr7.3:12193311-12193330 | MS.gene007461:CDS | 35.0% |
| ! | ATTGAGATTCCTTTTCCATC+AGG | - | chr7.3:12193592-12193611 | None:intergenic | 35.0% |
| ! | GCACTCTTTTGCTAATAATG+TGG | + | chr7.3:12192344-12192363 | MS.gene007461:intron | 35.0% |
| ! | TAGCTATGTAATGGAAGAAG+CGG | + | chr7.3:12193898-12193917 | MS.gene007461:CDS | 35.0% |
| ! | TATTATAACGAGGGGCATAT+TGG | - | chr7.3:12192063-12192082 | None:intergenic | 35.0% |
| !! | AGATCGCTTTTCATTGATAC+TGG | - | chr7.3:12193651-12193670 | None:intergenic | 35.0% |
| !! | TACTTCTAAAGCTCGTGATT+CGG | - | chr7.3:12193129-12193148 | None:intergenic | 35.0% |
| !! | TCACGAGCTTTAGAAGTAAT+TGG | + | chr7.3:12193131-12193150 | MS.gene007461:CDS | 35.0% |
| !! | TTGCTTTTATACCATCCGAT+TGG | - | chr7.3:12193205-12193224 | None:intergenic | 35.0% |
| !!! | TGCTGATTTTAGTCATGAGA+TGG | - | chr7.3:12191233-12191252 | None:intergenic | 35.0% |
| !!! | TTTTCTGGCTTTAGAAGAAG+CGG | + | chr7.3:12192610-12192629 | MS.gene007461:intron | 35.0% |
| AAAAGCAAGCCTGATGGAAA+AGG | + | chr7.3:12193580-12193599 | MS.gene007461:CDS | 40.0% | |
| AAAGGTCCGAAAACTGTTGA+CGG | - | chr7.3:12192803-12192822 | None:intergenic | 40.0% | |
| AACCTGCGTTCGTTTACTTT+CGG | - | chr7.3:12191903-12191922 | None:intergenic | 40.0% | |
| AACTTAACTCATCGGAGTCA+TGG | + | chr7.3:12192703-12192722 | MS.gene007461:CDS | 40.0% | |
| ACTCCTTTATCTCCATCTTG+AGG | - | chr7.3:12193796-12193815 | None:intergenic | 40.0% | |
| AGAGCAGTTGAAATCTGCAT+TGG | + | chr7.3:12193400-12193419 | MS.gene007461:CDS | 40.0% | |
| ATCACACAGTCCAATATCTG+AGG | + | chr7.3:12191923-12191942 | MS.gene007461:CDS | 40.0% | |
| ATCTCAAGCAAAATCCTTGG+AGG | + | chr7.3:12193268-12193287 | MS.gene007461:CDS | 40.0% | |
| ATGAAAAGCGATCTACTGAC+AGG | + | chr7.3:12193657-12193676 | MS.gene007461:CDS | 40.0% | |
| ATGAGATGGCACAAAGAGAA+TGG | - | chr7.3:12191219-12191238 | None:intergenic | 40.0% | |
| CAACTGCTCTACTTCAGATT+TGG | - | chr7.3:12193390-12193409 | None:intergenic | 40.0% | |
| CAAGATCAAGTATGCTTGTG+TGG | + | chr7.3:12191517-12191536 | MS.gene007461:intron | 40.0% | |
| CAAGATGGAGATAAAGGAGT+TGG | + | chr7.3:12193796-12193815 | MS.gene007461:CDS | 40.0% | |
| CACACAAGCATACTTGATCT+TGG | - | chr7.3:12191519-12191538 | None:intergenic | 40.0% | |
| CACACTGAAGTGATCAAGTT+AGG | - | chr7.3:12191673-12191692 | None:intergenic | 40.0% | |
| CACTTCAGTGTGTTATGGTT+TGG | + | chr7.3:12191681-12191700 | MS.gene007461:intron | 40.0% | |
| GAAGACAAAAGTTCAAGAGG+AGG | + | chr7.3:12192725-12192744 | MS.gene007461:CDS | 40.0% | |
| GAATTGAGGAAAGCTATAGC+TGG | + | chr7.3:12193545-12193564 | MS.gene007461:CDS | 40.0% | |
| GCATCTATACTTTCTACCAC+CGG | + | chr7.3:12194055-12194074 | MS.gene007461:CDS | 40.0% | |
| GGTATCTTTCTTATGGGGTT+TGG | - | chr7.3:12191867-12191886 | None:intergenic | 40.0% | |
| TGAAAAGCGATCTACTGACA+GGG | + | chr7.3:12193658-12193677 | MS.gene007461:CDS | 40.0% | |
| TGAAAGTTCAGTCTGATCAG+TGG | + | chr7.3:12194011-12194030 | MS.gene007461:CDS | 40.0% | |
| TGTAGCAGGTGATTTCCTTT+GGG | - | chr7.3:12191781-12191800 | None:intergenic | 40.0% | |
| TTCTAATCTGCAATGTGCTC+TGG | - | chr7.3:12193460-12193479 | None:intergenic | 40.0% | |
| TTCTTGAAGTCGTGCTTCTT+CGG | - | chr7.3:12192832-12192851 | None:intergenic | 40.0% | |
| TTGTAGCAGGTGATTTCCTT+TGG | - | chr7.3:12191782-12191801 | None:intergenic | 40.0% | |
| ! | ACATTTTCCATTGTTTCCGG+TGG | - | chr7.3:12194074-12194093 | None:intergenic | 40.0% |
| ! | ACTTTCGGACTCATGTCTTT+TGG | - | chr7.3:12191888-12191907 | None:intergenic | 40.0% |
| ! | AGAATCCCGTCAACAGTTTT+CGG | + | chr7.3:12192794-12192813 | MS.gene007461:CDS | 40.0% |
| ! | ATTCTTCCAGCTCTTTTGAC+AGG | - | chr7.3:12192779-12192798 | None:intergenic | 40.0% |
| ! | GGTTAGTTAGACTTGCCTTA+TGG | + | chr7.3:12192370-12192389 | MS.gene007461:intron | 40.0% |
| ! | TATGCTAATTGGCTTATGGC+TGG | + | chr7.3:12191732-12191751 | MS.gene007461:intron | 40.0% |
| ! | TTCTTCCAGCTCTTTTGACA+GGG | - | chr7.3:12192778-12192797 | None:intergenic | 40.0% |
| !! | ACCAAACTCTGGTTCTAACT+CGG | + | chr7.3:12191830-12191849 | MS.gene007461:CDS | 40.0% |
| !! | AGAAGATCTGAAGAGTGCTA+AGG | + | chr7.3:12192677-12192696 | MS.gene007461:CDS | 40.0% |
| !! | CAAGTCCTTAGCTTTTGAGT+TGG | + | chr7.3:12193235-12193254 | MS.gene007461:CDS | 40.0% |
| !! | CACTGATTCAACCAATGGAA+AGG | + | chr7.3:12193310-12193329 | MS.gene007461:CDS | 40.0% |
| !! | CTTGACACTGATTCAACCAA+TGG | + | chr7.3:12193305-12193324 | MS.gene007461:CDS | 40.0% |
| !! | GATTTCCTTTGGGACATTTC+TGG | - | chr7.3:12191771-12191790 | None:intergenic | 40.0% |
| !! | TAGAAGTGCTTACGAACAAC+TGG | + | chr7.3:12193475-12193494 | MS.gene007461:CDS | 40.0% |
| !! | TGAAGAAGATTGGAGTGTTG+TGG | + | chr7.3:12194212-12194231 | MS.gene007461:CDS | 40.0% |
| !!! | AATCCATTGAGTGCTGCTTT+TGG | - | chr7.3:12192911-12192930 | None:intergenic | 40.0% |
| AAGGTCCGAAAACTGTTGAC+GGG | - | chr7.3:12192802-12192821 | None:intergenic | 45.0% | |
| AATCCTTGGAGGAACTTGTG+AGG | + | chr7.3:12193279-12193298 | MS.gene007461:CDS | 45.0% | |
| AGAGCTAAAAGCAAGCCTGA+TGG | + | chr7.3:12193574-12193593 | MS.gene007461:CDS | 45.0% | |
| AGATTTGGCAGAGATAAGCG+CGG | - | chr7.3:12193375-12193394 | None:intergenic | 45.0% | |
| ATCAGAATCCAGTGAGAGAG+AGG | + | chr7.3:12193508-12193527 | MS.gene007461:CDS | 45.0% | |
| ATGCTCAGATTCAGGACTTG+AGG | + | chr7.3:12193036-12193055 | MS.gene007461:CDS | 45.0% | |
| ATGCTCCAGAAATGTCCCAA+AGG | + | chr7.3:12191763-12191782 | MS.gene007461:CDS | 45.0% | |
| CAATGGAAAGGGACTTTCTC+AGG | + | chr7.3:12193322-12193341 | MS.gene007461:CDS | 45.0% | |
| CAGAGTTGGAAGCCGAATTA+AGG | + | chr7.3:12193984-12194003 | MS.gene007461:CDS | 45.0% | |
| CAGTTGAAGACACCAAACTC+TGG | + | chr7.3:12191819-12191838 | MS.gene007461:CDS | 45.0% | |
| CTGAGAAAGTCCCTTTCCAT+TGG | - | chr7.3:12193324-12193343 | None:intergenic | 45.0% | |
| CTTTCTACCACCGGAAACAA+TGG | + | chr7.3:12194064-12194083 | MS.gene007461:CDS | 45.0% | |
| GACATTTAACCCACTTGGGT+TGG | + | chr7.3:12192159-12192178 | MS.gene007461:intron | 45.0% | |
| GACTAGCAAGGTTCAGGAAT+TGG | + | chr7.3:12192632-12192651 | MS.gene007461:CDS | 45.0% | |
| GAGAGAGGCTGAATTATACG+AGG | + | chr7.3:12193523-12193542 | MS.gene007461:CDS | 45.0% | |
| GGGACTTTCTCAGGAAAATG+AGG | + | chr7.3:12193331-12193350 | MS.gene007461:CDS | 45.0% | |
| GTCTGATCATGCTCAGATTC+AGG | + | chr7.3:12193028-12193047 | MS.gene007461:CDS | 45.0% | |
| TAATTCAGCCTCTCTCTCAC+TGG | - | chr7.3:12193519-12193538 | None:intergenic | 45.0% | |
| TAGCGTTGCATAACTTCCTC+CGG | + | chr7.3:12191635-12191654 | MS.gene007461:intron | 45.0% | |
| TAGGAGAATCAATCATCCGG+AGG | - | chr7.3:12191654-12191673 | None:intergenic | 45.0% | |
| TCAATTGCTGAGTTTGTCGG+CGG | + | chr7.3:12193607-12193626 | MS.gene007461:CDS | 45.0% | |
| TCAGATTCAGGACTTGAGGA+TGG | + | chr7.3:12193040-12193059 | MS.gene007461:CDS | 45.0% | |
| TCAGGCTGCAAATTCAGAGT+TGG | + | chr7.3:12193970-12193989 | MS.gene007461:CDS | 45.0% | |
| TGAGTCGGTTGAAACAGCAA+GGG | + | chr7.3:12193847-12193866 | MS.gene007461:CDS | 45.0% | |
| TGATCAGTGGAGAAAAGCAG+CGG | + | chr7.3:12194024-12194043 | MS.gene007461:CDS | 45.0% | |
| TGCATGGCAATCTGAACTTG+AGG | + | chr7.3:12192881-12192900 | MS.gene007461:CDS | 45.0% | |
| TGCCGAGATAAGATACCAAG+AGG | + | chr7.3:12193427-12193446 | MS.gene007461:CDS | 45.0% | |
| TGGATACTGATGTTGCAGAG+TGG | + | chr7.3:12193711-12193730 | MS.gene007461:CDS | 45.0% | |
| TGTCCAAAAGCAGCACTCAA+TGG | + | chr7.3:12192905-12192924 | MS.gene007461:CDS | 45.0% | |
| TTGAGTCGGTTGAAACAGCA+AGG | + | chr7.3:12193846-12193865 | MS.gene007461:CDS | 45.0% | |
| TTTCCTCACAAGTTCCTCCA+AGG | - | chr7.3:12193285-12193304 | None:intergenic | 45.0% | |
| ! | CTCAATGGATTCATCTGCTC+TGG | + | chr7.3:12192920-12192939 | MS.gene007461:CDS | 45.0% |
| ! | TGCTCTGGATGTATTCCTCT+TGG | - | chr7.3:12193445-12193464 | None:intergenic | 45.0% |
| !! | AGAAGATTGGAGTGTTGTGG+AGG | + | chr7.3:12194215-12194234 | MS.gene007461:CDS | 45.0% |
| !! | CAGAGTTTGGTGTCTTCAAC+TGG | - | chr7.3:12191821-12191840 | None:intergenic | 45.0% |
| !! | CTTTCTTATGGGGTTTGGTG+AGG | - | chr7.3:12191862-12191881 | None:intergenic | 45.0% |
| !! | TTAGAAGAAGCGGACTAGCA+AGG | + | chr7.3:12192620-12192639 | MS.gene007461:intron | 45.0% |
| !! | TTGGGACATTTCTGGAGCAT+TGG | - | chr7.3:12191763-12191782 | None:intergenic | 45.0% |
| AAGTCGTGCTTCTTCGGAAG+CGG | - | chr7.3:12192826-12192845 | None:intergenic | 50.0% | |
| ACTGTCCCTGTCAAAAGAGC+TGG | + | chr7.3:12192770-12192789 | MS.gene007461:CDS | 50.0% | |
| AGTTTGTCGGCGGAGAATGA+GGG | + | chr7.3:12193617-12193636 | MS.gene007461:CDS | 50.0% | |
| CACTGAAGAGGCTGTTGAGT+CGG | + | chr7.3:12193832-12193851 | MS.gene007461:CDS | 50.0% | |
| CTGAGCAGCATCTAGCTGTT+CGG | - | chr7.3:12193954-12193973 | None:intergenic | 50.0% | |
| CTTGCCTTATGGAGCTATCG+CGG | + | chr7.3:12192381-12192400 | MS.gene007461:intron | 50.0% | |
| GAATCGAACCTGAGACCTTG+CGG | - | chr7.3:12192223-12192242 | None:intergenic | 50.0% | |
| GACAGTGGAGACACTCCAAT+CGG | + | chr7.3:12193187-12193206 | MS.gene007461:CDS | 50.0% | |
| GCCGAGTTAGAACCAGAGTT+TGG | - | chr7.3:12191834-12191853 | None:intergenic | 50.0% | |
| GTCCGAAAGTAAACGAACGC+AGG | + | chr7.3:12191898-12191917 | MS.gene007461:CDS | 50.0% | |
| GTCTCAGGTTCGATTCTCTC+CGG | + | chr7.3:12192227-12192246 | MS.gene007461:intron | 50.0% | |
| TTAGCCGCGATAGCTCCATA+AGG | - | chr7.3:12192388-12192407 | None:intergenic | 50.0% | |
| !! | GTGGTATTGGCTTGGGTCTT+GGG | + | chr7.3:12192186-12192205 | MS.gene007461:intron | 50.0% |
| !! | TCTTATGGGGTTTGGTGAGG+AGG | - | chr7.3:12191859-12191878 | None:intergenic | 50.0% |
| AACAGCAAGGGCTGCAGAGA+AGG | + | chr7.3:12193859-12193878 | MS.gene007461:CDS | 55.0% | |
| AGACCCAAGCCAATACCACC+AGG | - | chr7.3:12192185-12192204 | None:intergenic | 55.0% | |
| CGAACAGCTAGATGCTGCTC+AGG | + | chr7.3:12193952-12193971 | MS.gene007461:CDS | 55.0% | |
| CTCAGGATCGAGATCGTGCA+TGG | + | chr7.3:12192865-12192884 | MS.gene007461:CDS | 55.0% | |
| GAGTTTGTCGGCGGAGAATG+AGG | + | chr7.3:12193616-12193635 | MS.gene007461:CDS | 55.0% | |
| GCAGTTCGAGGAGTTGTAGC+AGG | - | chr7.3:12191795-12191814 | None:intergenic | 55.0% | |
| GTGCTTCTTCGGAAGCGGAA+AGG | - | chr7.3:12192821-12192840 | None:intergenic | 55.0% | |
| GTGGAGACACTCCAATCGGA+TGG | + | chr7.3:12193191-12193210 | MS.gene007461:CDS | 55.0% | |
| GTTTGTCGGCGGAGAATGAG+GGG | + | chr7.3:12193618-12193637 | MS.gene007461:CDS | 55.0% | |
| TCAGTGGAGAAAAGCAGCGG+AGG | + | chr7.3:12194027-12194046 | MS.gene007461:CDS | 55.0% | |
| TTCAACTGGCGAGCAGTTCG+AGG | - | chr7.3:12191807-12191826 | None:intergenic | 55.0% | |
| !! | GAAGCGGACTAGCAAGGTTC+AGG | + | chr7.3:12192626-12192645 | MS.gene007461:CDS | 55.0% |
| !! | GGTGGTATTGGCTTGGGTCT+TGG | + | chr7.3:12192185-12192204 | MS.gene007461:intron | 55.0% |
| !! | TATGGGGTTTGGTGAGGAGG+AGG | - | chr7.3:12191856-12191875 | None:intergenic | 55.0% |
| !! | TGGCCTGGTGGTATTGGCTT+GGG | + | chr7.3:12192179-12192198 | MS.gene007461:intron | 55.0% |
| !! | TTAACCCACTTGGGTTGGCC+TGG | + | chr7.3:12192164-12192183 | MS.gene007461:intron | 55.0% |
| !! | TTGGCCTGGTGGTATTGGCT+TGG | + | chr7.3:12192178-12192197 | MS.gene007461:intron | 55.0% |
| !! | TTGGGTTGGCCTGGTGGTAT+TGG | + | chr7.3:12192173-12192192 | MS.gene007461:intron | 55.0% |
| ACCACCAGGCCAACCCAAGT+GGG | - | chr7.3:12192171-12192190 | None:intergenic | 60.0% | |
| TACCACCAGGCCAACCCAAG+TGG | - | chr7.3:12192172-12192191 | None:intergenic | 60.0% | |
| TCGAACCTGAGACCTTGCGG+AGG | - | chr7.3:12192220-12192239 | None:intergenic | 60.0% | |
| GTGCTCCTCCGCAAGGTCTC+AGG | + | chr7.3:12192212-12192231 | MS.gene007461:intron | 65.0% | |
| ! | TGGGAGTGTGCTCCTCCGCA+AGG | + | chr7.3:12192205-12192224 | MS.gene007461:intron | 65.0% |
| !! | ACCCACTTGGGTTGGCCTGG+TGG | + | chr7.3:12192167-12192186 | MS.gene007461:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 12191154 | 12194252 | 12191154 | ID=MS.gene007461 |
| chr7.3 | mRNA | 12191154 | 12194252 | 12191154 | ID=MS.gene007461.t1;Parent=MS.gene007461 |
| chr7.3 | exon | 12191154 | 12191173 | 12191154 | ID=MS.gene007461.t1.exon1;Parent=MS.gene007461.t1 |
| chr7.3 | CDS | 12191154 | 12191173 | 12191154 | ID=cds.MS.gene007461.t1;Parent=MS.gene007461.t1 |
| chr7.3 | exon | 12191758 | 12191944 | 12191758 | ID=MS.gene007461.t1.exon2;Parent=MS.gene007461.t1 |
| chr7.3 | CDS | 12191758 | 12191944 | 12191758 | ID=cds.MS.gene007461.t1;Parent=MS.gene007461.t1 |
| chr7.3 | exon | 12192624 | 12194252 | 12192624 | ID=MS.gene007461.t1.exon3;Parent=MS.gene007461.t1 |
| chr7.3 | CDS | 12192624 | 12194252 | 12192624 | ID=cds.MS.gene007461.t1;Parent=MS.gene007461.t1 |
| Gene Sequence |
| Protein sequence |
