Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26785.t1 | XP_003609875.1 | 95 | 580 | 26 | 1 | 1 | 577 | 1 | 580 | 2.60E-299 | 1037.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26785.t1 | Q84R11 | 68.8 | 523 | 156 | 3 | 60 | 575 | 58 | 580 | 3.4e-191 | 669.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26785.t1 | G7JR05 | 95.0 | 580 | 26 | 1 | 1 | 577 | 1 | 580 | 1.9e-299 | 1037.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene26785 | 0.856542 | 3.00E-62 | -1.69E-46 |
| MS.gene049369 | MS.gene26785 | 0.851044 | 1.15E-60 | -1.69E-46 |
| MS.gene049396 | MS.gene26785 | 0.809426 | 1.90E-50 | -1.69E-46 |
| MS.gene050122 | MS.gene26785 | 0.824328 | 8.56E-54 | -1.69E-46 |
| MS.gene051509 | MS.gene26785 | 0.804888 | 1.74E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene26785 | 0.807733 | 4.38E-50 | -1.69E-46 |
| MS.gene052414 | MS.gene26785 | 0.803638 | 3.17E-49 | -1.69E-46 |
| MS.gene053449 | MS.gene26785 | 0.820538 | 6.51E-53 | -1.69E-46 |
| MS.gene053813 | MS.gene26785 | 0.803229 | 3.85E-49 | -1.69E-46 |
| MS.gene053912 | MS.gene26785 | 0.819767 | 9.77E-53 | -1.69E-46 |
| MS.gene053916 | MS.gene26785 | 0.80227 | 6.08E-49 | -1.69E-46 |
| MS.gene055909 | MS.gene26785 | 0.818338 | 2.07E-52 | -1.69E-46 |
| MS.gene055911 | MS.gene26785 | 0.817697 | 2.88E-52 | -1.69E-46 |
| MS.gene05602 | MS.gene26785 | 0.809762 | 1.61E-50 | -1.69E-46 |
| MS.gene056422 | MS.gene26785 | 0.813441 | 2.56E-51 | -1.69E-46 |
| MS.gene056511 | MS.gene26785 | 0.823572 | 1.29E-53 | -1.69E-46 |
| MS.gene056609 | MS.gene26785 | 0.802663 | 5.04E-49 | -1.69E-46 |
| MS.gene05664 | MS.gene26785 | 0.833085 | 6.53E-56 | -1.69E-46 |
| MS.gene05666 | MS.gene26785 | 0.853448 | 2.37E-61 | -1.69E-46 |
| MS.gene05735 | MS.gene26785 | 0.818613 | 1.79E-52 | -1.69E-46 |
| MS.gene057449 | MS.gene26785 | 0.801215 | 1.00E-48 | -1.69E-46 |
| MS.gene057537 | MS.gene26785 | 0.842095 | 3.19E-58 | -1.69E-46 |
| MS.gene057734 | MS.gene26785 | 0.844233 | 8.58E-59 | -1.69E-46 |
| MS.gene057749 | MS.gene26785 | 0.803296 | 3.73E-49 | -1.69E-46 |
| MS.gene057823 | MS.gene26785 | 0.809364 | 1.96E-50 | -1.69E-46 |
| MS.gene057926 | MS.gene26785 | 0.831378 | 1.73E-55 | -1.69E-46 |
| MS.gene057927 | MS.gene26785 | 0.813314 | 2.73E-51 | -1.69E-46 |
| MS.gene058075 | MS.gene26785 | 0.820223 | 7.69E-53 | -1.69E-46 |
| MS.gene058120 | MS.gene26785 | 0.814016 | 1.91E-51 | -1.69E-46 |
| MS.gene058459 | MS.gene26785 | 0.815298 | 9.93E-52 | -1.69E-46 |
| MS.gene058928 | MS.gene26785 | 0.810919 | 9.07E-51 | -1.69E-46 |
| MS.gene058948 | MS.gene26785 | 0.832975 | 6.95E-56 | -1.69E-46 |
| MS.gene058949 | MS.gene26785 | 0.820872 | 5.45E-53 | -1.69E-46 |
| MS.gene059366 | MS.gene26785 | 0.813175 | 2.92E-51 | -1.69E-46 |
| MS.gene059368 | MS.gene26785 | 0.816313 | 5.90E-52 | -1.69E-46 |
| MS.gene059674 | MS.gene26785 | 0.857205 | 1.91E-62 | -1.69E-46 |
| MS.gene059711 | MS.gene26785 | 0.8229 | 1.85E-53 | -1.69E-46 |
| MS.gene059807 | MS.gene26785 | 0.827135 | 1.85E-54 | -1.69E-46 |
| MS.gene05986 | MS.gene26785 | 0.823444 | 1.38E-53 | -1.69E-46 |
| MS.gene060835 | MS.gene26785 | 0.806106 | 9.66E-50 | -1.69E-46 |
| MS.gene060837 | MS.gene26785 | 0.830448 | 2.92E-55 | -1.69E-46 |
| MS.gene061041 | MS.gene26785 | 0.808942 | 2.42E-50 | -1.69E-46 |
| MS.gene061051 | MS.gene26785 | -0.818284 | 2.12E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene26785 | MS.gene007461 | PPI |
| MS.gene26785 | MS.gene067520 | PPI |
| MS.gene26785 | MS.gene09808 | PPI |
| MS.gene073783 | MS.gene26785 | PPI |
| MS.gene26785 | MS.gene22464 | PPI |
| MS.gene26785 | MS.gene30905 | PPI |
| MS.gene029871 | MS.gene26785 | PPI |
| MS.gene26785 | MS.gene073784 | PPI |
| MS.gene26785 | MS.gene20038 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26785.t1 | MTR_4g123930 | 96.207 | 580 | 19 | 1 | 1 | 577 | 1 | 580 | 0.0 | 1140 |
| MS.gene26785.t1 | MTR_4g123930 | 97.778 | 450 | 10 | 0 | 128 | 577 | 1 | 450 | 0.0 | 904 |
| MS.gene26785.t1 | MTR_4g123930 | 94.796 | 442 | 20 | 1 | 1 | 439 | 1 | 442 | 0.0 | 860 |
| MS.gene26785.t1 | MTR_4g123930 | 96.474 | 312 | 11 | 0 | 128 | 439 | 1 | 312 | 0.0 | 623 |
| MS.gene26785.t1 | MTR_7g108940 | 30.028 | 363 | 217 | 8 | 117 | 453 | 175 | 526 | 2.42e-40 | 157 |
| MS.gene26785.t1 | MTR_7g108940 | 30.028 | 363 | 217 | 8 | 117 | 453 | 175 | 526 | 4.03e-40 | 156 |
| MS.gene26785.t1 | MTR_8g020880 | 28.977 | 352 | 213 | 7 | 109 | 453 | 242 | 563 | 4.16e-33 | 134 |
| MS.gene26785.t1 | MTR_8g020880 | 28.977 | 352 | 213 | 7 | 109 | 453 | 242 | 563 | 4.47e-33 | 135 |
| MS.gene26785.t1 | MTR_5g007870 | 36.719 | 128 | 74 | 3 | 304 | 430 | 443 | 564 | 2.14e-14 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26785.t1 | AT3G17470 | 69.084 | 524 | 155 | 3 | 59 | 575 | 72 | 595 | 0.0 | 712 |
| MS.gene26785.t1 | AT3G17470 | 69.084 | 524 | 155 | 3 | 59 | 575 | 57 | 580 | 0.0 | 711 |
| MS.gene26785.t1 | AT3G17470 | 68.407 | 383 | 119 | 1 | 59 | 439 | 57 | 439 | 0.0 | 543 |
| MS.gene26785.t1 | AT1G54130 | 32.229 | 332 | 192 | 7 | 109 | 432 | 234 | 540 | 1.39e-37 | 148 |
| MS.gene26785.t1 | AT4G02260 | 30.275 | 327 | 198 | 7 | 117 | 424 | 177 | 492 | 2.55e-37 | 148 |
| MS.gene26785.t1 | AT4G02260 | 30.091 | 329 | 200 | 7 | 117 | 426 | 177 | 494 | 3.17e-37 | 148 |
| MS.gene26785.t1 | AT4G02260 | 30.091 | 329 | 200 | 7 | 117 | 426 | 177 | 494 | 3.39e-37 | 148 |
| MS.gene26785.t1 | AT3G14050 | 32.229 | 332 | 191 | 9 | 110 | 432 | 230 | 536 | 2.32e-36 | 144 |
| MS.gene26785.t1 | AT4G02260 | 30.000 | 330 | 200 | 8 | 117 | 426 | 177 | 495 | 1.11e-35 | 143 |
Find 142 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCACTTGGAAAATCTTTA+AGG | 0.162251 | 8.2:+10285344 | None:intergenic |
| TGACATTAGAGCTTTGATTT+TGG | 0.217842 | 8.2:-10286293 | MS.gene26785:CDS |
| ATCCACTAATTCCGCAAGTA+TGG | 0.254255 | 8.2:+10285994 | None:intergenic |
| AGCACATCATTTACATCTTC+TGG | 0.271709 | 8.2:+10285899 | None:intergenic |
| CATGCTGGCTGCAGCTGAAC+TGG | 0.295606 | 8.2:-10285377 | MS.gene26785:CDS |
| CATGCTTCTCGCTGATCTTC+AGG | 0.298040 | 8.2:-10287516 | MS.gene26785:intron |
| GCAGTGGATGTAAGTGAAAT+TGG | 0.300443 | 8.2:-10285704 | MS.gene26785:CDS |
| TAACTACATATCACTTGAAT+TGG | 0.301558 | 8.2:-10286152 | MS.gene26785:CDS |
| CAGGTATATAATAAGGAGTT+TGG | 0.304931 | 8.2:-10284792 | MS.gene26785:CDS |
| TTTCCAAGTGCAAATCATAA+AGG | 0.319956 | 8.2:-10285334 | MS.gene26785:CDS |
| TTTAATTCAGGTATATAATA+AGG | 0.339845 | 8.2:-10284799 | MS.gene26785:CDS |
| AGAGGAGAGCTTTGAAGAAC+AGG | 0.345980 | 8.2:+10287584 | None:intergenic |
| GTGGATGATATCTCAGTTAA+AGG | 0.351684 | 8.2:-10285977 | MS.gene26785:CDS |
| TGCATCTAGAGTAGACATTC+TGG | 0.356083 | 8.2:-10286362 | MS.gene26785:CDS |
| TCCACATAAAGATATGAATA+AGG | 0.356386 | 8.2:+10286103 | None:intergenic |
| GGATTTCTTTCCACATAGAT+TGG | 0.373050 | 8.2:+10285789 | None:intergenic |
| AATGCATTATCTCCAGACTT+AGG | 0.376086 | 8.2:+10285854 | None:intergenic |
| AGGTTCTGCTACTGCTCATT+TGG | 0.380091 | 8.2:-10286413 | MS.gene26785:CDS |
| CTGGAGAGAGAGCGTGCTAC+AGG | 0.382710 | 8.2:-10285826 | MS.gene26785:CDS |
| TTCCAAGTGCAAATCATAAA+GGG | 0.388198 | 8.2:-10285333 | MS.gene26785:CDS |
| TGGGAGGACTAGACCCTTGA+TGG | 0.390942 | 8.2:-10285684 | MS.gene26785:CDS |
| GATTATATTGCCAGGCCAAA+AGG | 0.405490 | 8.2:-10285752 | MS.gene26785:CDS |
| ACAGATAAGAACTACTGAAA+TGG | 0.407491 | 8.2:-10285657 | MS.gene26785:CDS |
| TGATGAATACAAGAAAATAT+TGG | 0.408026 | 8.2:-10284853 | MS.gene26785:CDS |
| AGATGATAGTGGTTTAATTC+AGG | 0.409345 | 8.2:-10284811 | MS.gene26785:CDS |
| CATATCTTTATGTGGATACA+TGG | 0.412806 | 8.2:-10286096 | MS.gene26785:CDS |
| CGAGATGGTTCGTAATTTAG+AGG | 0.415458 | 8.2:-10284883 | MS.gene26785:CDS |
| TTGAGAGAGGTGTTGGAAGT+AGG | 0.431304 | 8.2:-10286469 | MS.gene26785:CDS |
| AAGAAAACAATAACCTCCTC+TGG | 0.439571 | 8.2:+10285575 | None:intergenic |
| ACTTCTACAGCACACGCTCT+TGG | 0.441837 | 8.2:+10287728 | None:intergenic |
| CACAATGAAGAAGCTCTTGA+AGG | 0.442293 | 8.2:-10285933 | MS.gene26785:CDS |
| ATGCATTATCTCCAGACTTA+GGG | 0.442953 | 8.2:+10285855 | None:intergenic |
| ATGGTGGCGCGTGGGGTAAT+CGG | 0.443215 | 8.2:+10287850 | None:intergenic |
| TCCCATACTTGCGGAATTAG+TGG | 0.444671 | 8.2:-10285996 | MS.gene26785:CDS |
| ATGATCTGCTGCTGATACCT+TGG | 0.450610 | 8.2:+10286226 | None:intergenic |
| CATGGCAATGGATAAAGCTT+TGG | 0.451814 | 8.2:+10287535 | None:intergenic |
| TCCTTATTCATATCTTTATG+TGG | 0.459286 | 8.2:-10286104 | MS.gene26785:CDS |
| ATGTCATGTGCATCTTCTCC+TGG | 0.459375 | 8.2:+10285205 | None:intergenic |
| CTTGACATGATGAGGCATCT+TGG | 0.461356 | 8.2:-10286256 | MS.gene26785:CDS |
| TCTTATCTGTATTTCCATCA+AGG | 0.463566 | 8.2:+10285670 | None:intergenic |
| GCGTGTGCTGTAGAAGTTCC+CGG | 0.464036 | 8.2:-10287722 | MS.gene26785:CDS |
| TTCTCGACAAGAACGGAGAT+GGG | 0.464209 | 8.2:-10285276 | MS.gene26785:CDS |
| AGCACACGCTCTTGGAGTAC+TGG | 0.464908 | 8.2:+10287736 | None:intergenic |
| CATGAAGTTCGAAGTCAGAT+AGG | 0.464988 | 8.2:-10286433 | MS.gene26785:CDS |
| TGGATACAAAAGTTTGCATA+TGG | 0.465288 | 8.2:-10285726 | MS.gene26785:CDS |
| GGAACTTACAGAGGTGATAG+AGG | 0.467883 | 8.2:-10285239 | MS.gene26785:CDS |
| CTTCATATGGCAGATGATAG+TGG | 0.471188 | 8.2:-10284822 | MS.gene26785:CDS |
| GAACGACCATCAGGAGTAAG+AGG | 0.473153 | 8.2:+10287566 | None:intergenic |
| ATTATATTGCCAGGCCAAAA+GGG | 0.474542 | 8.2:-10285751 | MS.gene26785:CDS |
| GTGACGCGGGTGGGTCGAGT+GGG | 0.475192 | 8.2:+10287773 | None:intergenic |
| TGCTCCTCTTGCTCATGCTG+TGG | 0.479821 | 8.2:-10286179 | MS.gene26785:CDS |
| ATAATAAGGAGTTTGGCAAC+AGG | 0.480517 | 8.2:-10284785 | MS.gene26785:CDS |
| GTGTTATCCACAAGTTCCTC+TGG | 0.484331 | 8.2:-10287638 | MS.gene26785:CDS |
| AGCTCTCCTCTTACTCCTGA+TGG | 0.487226 | 8.2:-10287572 | MS.gene26785:CDS |
| GAAAGAGGAGAACGACCATC+AGG | 0.488013 | 8.2:+10287557 | None:intergenic |
| TATCACCATCTTTCCTCCAC+CGG | 0.490068 | 8.2:+10287703 | None:intergenic |
| GGAGATAATGCATTGGAAGC+TGG | 0.491096 | 8.2:-10285845 | MS.gene26785:CDS |
| CTTCTCGACAAGAACGGAGA+TGG | 0.492481 | 8.2:-10285277 | MS.gene26785:CDS |
| GGTGACGCGGGTGGGTCGAG+TGG | 0.492820 | 8.2:+10287772 | None:intergenic |
| ATTGGATGAGAAACTTCATA+TGG | 0.494227 | 8.2:-10284835 | MS.gene26785:CDS |
| GTGGTGTTGAACCCTAAGTC+TGG | 0.496487 | 8.2:-10285866 | MS.gene26785:CDS |
| TGTGGAAAGAAATCCCTTCT+CGG | 0.498703 | 8.2:-10285781 | MS.gene26785:CDS |
| CAGTGGATGTAAGTGAAATT+GGG | 0.501702 | 8.2:-10285703 | MS.gene26785:CDS |
| TGGTTTGTTTGAGAAGAGAA+TGG | 0.502046 | 8.2:+10287831 | None:intergenic |
| TAAGCGGTGATGAGTGGTAG+TGG | 0.504875 | 8.2:+10287811 | None:intergenic |
| GATGCAGAAGTTATATCTGC+TGG | 0.508548 | 8.2:-10286496 | MS.gene26785:CDS |
| ACTCGACCCACCCGCGTCAC+CGG | 0.513152 | 8.2:-10287770 | MS.gene26785:CDS |
| GGATACATGGTTGAGAAGTC+AGG | 0.514914 | 8.2:-10286083 | MS.gene26785:CDS |
| ATAGAGGAGCTTGGTGCACC+AGG | 0.521684 | 8.2:-10285223 | MS.gene26785:CDS |
| CTTATCTGTATTTCCATCAA+GGG | 0.524648 | 8.2:+10285671 | None:intergenic |
| CCGGAGACCGGTGACGCGGG+TGG | 0.524804 | 8.2:+10287763 | None:intergenic |
| ATCCCTTTATGATTTGCACT+TGG | 0.525949 | 8.2:+10285331 | None:intergenic |
| TGAGAGTAAGCGGTGATGAG+TGG | 0.526801 | 8.2:+10287805 | None:intergenic |
| GCTCCTCTTGCTCATGCTGT+GGG | 0.528069 | 8.2:-10286178 | MS.gene26785:CDS |
| CAAAAGTTTGCATATGGCAG+TGG | 0.532210 | 8.2:-10285720 | MS.gene26785:CDS |
| CCACCCGCGTCACCGGTCTC+CGG | 0.535267 | 8.2:-10287763 | MS.gene26785:CDS |
| AGTTCCCGGTGGAGGAAAGA+TGG | 0.535806 | 8.2:-10287708 | MS.gene26785:CDS |
| ATTGCCAGGCCAAAAGGGAA+TGG | 0.535893 | 8.2:-10285746 | MS.gene26785:CDS |
| ATGGATAGGTTAGCTGTTGG+TGG | 0.537695 | 8.2:-10285638 | MS.gene26785:CDS |
| TCTCATTCATTATACAAGGC+TGG | 0.539860 | 8.2:-10285608 | MS.gene26785:CDS |
| GGAAGAAGAGTGAGAGTAAG+CGG | 0.541797 | 8.2:+10287795 | None:intergenic |
| AAGAAGACCAGAGGAACTTG+TGG | 0.542935 | 8.2:+10287631 | None:intergenic |
| CTTCTTGACTCGAACAGTGA+TGG | 0.544084 | 8.2:-10285175 | MS.gene26785:CDS |
| TTTCGCCTTCTCGACAAGAA+CGG | 0.544865 | 8.2:-10285283 | MS.gene26785:CDS |
| CATCTCCGTTCTTGTCGAGA+AGG | 0.545112 | 8.2:+10285278 | None:intergenic |
| CTCTTGGAGTACTGGACCAC+CGG | 0.545724 | 8.2:+10287744 | None:intergenic |
| GGCATCTTGGTCACCTTCCA+AGG | 0.547221 | 8.2:-10286243 | MS.gene26785:CDS |
| ATGGATAAAGCTTTGGAAAG+AGG | 0.547465 | 8.2:+10287542 | None:intergenic |
| TAGGTTAGCTGTTGGTGGAA+TGG | 0.547704 | 8.2:-10285633 | MS.gene26785:CDS |
| GGACTAAAGATTATATTGCC+AGG | 0.550792 | 8.2:-10285760 | MS.gene26785:CDS |
| CTGAAATTCATCAGAGCTGA+GGG | 0.550894 | 8.2:+10285150 | None:intergenic |
| ATCACCATCTTTCCTCCACC+GGG | 0.551354 | 8.2:+10287704 | None:intergenic |
| TCCACTAATTCCGCAAGTAT+GGG | 0.553251 | 8.2:+10285995 | None:intergenic |
| GCTGTAGAAGTTCCCGGTGG+AGG | 0.555769 | 8.2:-10287716 | MS.gene26785:CDS |
| TGACGCGGGTGGGTCGAGTG+GGG | 0.558230 | 8.2:+10287774 | None:intergenic |
| ATCAGCGAGAAGCATGGCAA+TGG | 0.559213 | 8.2:+10287523 | None:intergenic |
| ATCAAATCATCCAATCTATG+TGG | 0.562146 | 8.2:-10285799 | MS.gene26785:CDS |
| GAAGATGTAAATGATGTGCT+TGG | 0.567130 | 8.2:-10285896 | MS.gene26785:CDS |
| CTTTGAAGCTTGACATGATG+AGG | 0.569527 | 8.2:-10286264 | MS.gene26785:CDS |
| AGAGCTTTGAAGAACAGGAA+TGG | 0.570567 | 8.2:+10287589 | None:intergenic |
| TGGAATATTGAGAGAGGTGT+TGG | 0.571119 | 8.2:-10286476 | MS.gene26785:CDS |
| TAAGAACTACTGAAATGGAT+AGG | 0.574391 | 8.2:-10285652 | MS.gene26785:CDS |
| TATAATCTTTAGTCCGAGAA+GGG | 0.574454 | 8.2:+10285768 | None:intergenic |
| GGCATCTCATTCATTATACA+AGG | 0.575422 | 8.2:-10285612 | MS.gene26785:CDS |
| GAGAAGAGAATGGTGGCGCG+TGG | 0.575660 | 8.2:+10287841 | None:intergenic |
| TTCAGCTGCAGCCAGCATGA+TGG | 0.579396 | 8.2:+10285381 | None:intergenic |
| AGTACTGGACCACCGGAGAC+CGG | 0.579842 | 8.2:+10287751 | None:intergenic |
| AGAAGAGAATGGTGGCGCGT+GGG | 0.580259 | 8.2:+10287842 | None:intergenic |
| ACCACCGGAGACCGGTGACG+CGG | 0.582141 | 8.2:+10287759 | None:intergenic |
| ATGAAGAAGCTCTTGAAGGA+TGG | 0.584555 | 8.2:-10285929 | MS.gene26785:CDS |
| ATATAATCTTTAGTCCGAGA+AGG | 0.585270 | 8.2:+10285767 | None:intergenic |
| TGGTTGAGAAGTCAGGAGAC+AGG | 0.587107 | 8.2:-10286076 | MS.gene26785:CDS |
| ATTCCCACAGCATGAGCAAG+AGG | 0.587161 | 8.2:+10286175 | None:intergenic |
| CGGAGACCGGTGACGCGGGT+GGG | 0.591943 | 8.2:+10287764 | None:intergenic |
| TAAGTCTGGAGATAATGCAT+TGG | 0.596696 | 8.2:-10285852 | MS.gene26785:CDS |
| GCGTTTAAAGACCATCATGC+TGG | 0.599824 | 8.2:-10285392 | MS.gene26785:CDS |
| CCACCGGAGACCGGTGACGC+GGG | 0.602844 | 8.2:+10287760 | None:intergenic |
| AGAAGCTCTTGAAGGATGGT+CGG | 0.606805 | 8.2:-10285925 | MS.gene26785:CDS |
| TGGAGAGAGAGCGTGCTACA+GGG | 0.607107 | 8.2:-10285825 | MS.gene26785:CDS |
| GAAGAGAATGGTGGCGCGTG+GGG | 0.611821 | 8.2:+10287843 | None:intergenic |
| ACAGAGGTGATAGAGGAGCT+TGG | 0.612835 | 8.2:-10285232 | MS.gene26785:CDS |
| CCCGCGTCACCGGTCTCCGG+TGG | 0.617971 | 8.2:-10287760 | MS.gene26785:CDS |
| TCTGCTGCTGATACCTTGGA+AGG | 0.625070 | 8.2:+10286230 | None:intergenic |
| AGAATCTGATCCCATACTTG+CGG | 0.627614 | 8.2:-10286005 | MS.gene26785:CDS |
| CTGAAGATCAGCGAGAAGCA+TGG | 0.633168 | 8.2:+10287517 | None:intergenic |
| TGATTTGACTGAGAGGATGA+AGG | 0.637086 | 8.2:-10287660 | MS.gene26785:CDS |
| CTTTCAATGATTTGACTGAG+AGG | 0.637305 | 8.2:-10287667 | MS.gene26785:CDS |
| TCTGAAATTCATCAGAGCTG+AGG | 0.641418 | 8.2:+10285149 | None:intergenic |
| AGATGGGAAGATAAGCATTG+AGG | 0.649781 | 8.2:-10285260 | MS.gene26785:CDS |
| AAGATGGTGATAGAACTTGT+CGG | 0.650862 | 8.2:-10287692 | MS.gene26785:CDS |
| ATCTGCTGGAATATTGAGAG+AGG | 0.655258 | 8.2:-10286482 | MS.gene26785:CDS |
| GGCTGGTCTTACTAATCCAG+AGG | 0.657487 | 8.2:-10285591 | MS.gene26785:CDS |
| TGATGTGCTTGGACTGCGAG+TGG | 0.660485 | 8.2:-10285885 | MS.gene26785:CDS |
| TGGTCTTACTAATCCAGAGG+AGG | 0.668643 | 8.2:-10285588 | MS.gene26785:intron |
| GCGTGGGGTAATCGGAAGCG+TGG | 0.673355 | 8.2:+10287858 | None:intergenic |
| TGATTTGAAAAGAAGACCAG+AGG | 0.678594 | 8.2:+10287622 | None:intergenic |
| TGGATGTAAGTGAAATTGGG+AGG | 0.681330 | 8.2:-10285700 | MS.gene26785:CDS |
| TTTGTTTGAGAAGAGAATGG+TGG | 0.686445 | 8.2:+10287834 | None:intergenic |
| AAGCATTGAGGAACTTACAG+AGG | 0.688318 | 8.2:-10285248 | MS.gene26785:CDS |
| GAAATGGATAGGTTAGCTGT+TGG | 0.706251 | 8.2:-10285641 | MS.gene26785:CDS |
| TTGAGAAGTCAGGAGACAGG+TGG | 0.721078 | 8.2:-10286073 | MS.gene26785:CDS |
| TGTGCTGTAGAAGTTCCCGG+TGG | 0.767826 | 8.2:-10287719 | MS.gene26785:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATGTTAGATAATAGATA+TGG | - | chr8.2:10285715-10285734 | MS.gene26785:CDS | 15.0% |
| !! | TACTATAAAGAAACAATAAA+CGG | + | chr8.2:10286116-10286135 | None:intergenic | 15.0% |
| !! | TTTAATTCAGGTATATAATA+AGG | - | chr8.2:10287849-10287868 | MS.gene26785:CDS | 15.0% |
| !!! | ATAAGAAAAGATTCTTTTTT+AGG | - | chr8.2:10285363-10285382 | MS.gene26785:CDS | 15.0% |
| !!! | GCAATTGATTTTAAATAATT+TGG | + | chr8.2:10285901-10285920 | None:intergenic | 15.0% |
| !!! | TAAAAAAAGATTCCTTTTTT+AGG | - | chr8.2:10285400-10285419 | MS.gene26785:CDS | 15.0% |
| !!! | TATTTTTTTATATTTGAGAC+CGG | - | chr8.2:10285499-10285518 | MS.gene26785:intron | 15.0% |
| !!! | TCTATTTGTTTTATTAGTTA+AGG | + | chr8.2:10285672-10285691 | None:intergenic | 15.0% |
| !! | AAGTCAATAAATAGTAATCA+TGG | + | chr8.2:10285308-10285327 | None:intergenic | 20.0% |
| !! | AATATTGTGGTATACATATA+AGG | - | chr8.2:10285526-10285545 | MS.gene26785:intron | 20.0% |
| !! | AGTTGTACATAATTTCTTAA+TGG | - | chr8.2:10287623-10287642 | MS.gene26785:CDS | 20.0% |
| !! | ATGAAAATGAATGAAAGTAA+TGG | + | chr8.2:10285164-10285183 | None:intergenic | 20.0% |
| !! | TGATGAATACAAGAAAATAT+TGG | - | chr8.2:10287795-10287814 | MS.gene26785:CDS | 20.0% |
| !! | TTATTCAATGAACCTAAAAA+AGG | + | chr8.2:10285415-10285434 | None:intergenic | 20.0% |
| !!! | ATAATTGATTTTGACATGTT+TGG | - | chr8.2:10285799-10285818 | MS.gene26785:CDS | 20.0% |
| !!! | TCTTTTCTTATATTTCAGAA+CGG | + | chr8.2:10285354-10285373 | None:intergenic | 20.0% |
| !!! | TGTTTTATTTTTTGATACTC+AGG | - | chr8.2:10287229-10287248 | MS.gene26785:intron | 20.0% |
| ! | AACAAATAGATAAGCTTAGA+AGG | - | chr8.2:10285682-10285701 | MS.gene26785:CDS | 25.0% |
| ! | CAAGTTAGAATCAATTATAG+AGG | + | chr8.2:10285850-10285869 | None:intergenic | 25.0% |
| ! | TAACTACATATCACTTGAAT+TGG | - | chr8.2:10286496-10286515 | MS.gene26785:CDS | 25.0% |
| ! | TCCACATAAAGATATGAATA+AGG | + | chr8.2:10286548-10286567 | None:intergenic | 25.0% |
| ! | TCCTTATTCATATCTTTATG+TGG | - | chr8.2:10286544-10286563 | MS.gene26785:intron | 25.0% |
| !! | AATTTCAGTAAGAGTTTGTT+TGG | + | chr8.2:10286058-10286077 | None:intergenic | 25.0% |
| AACAGCTACTATACTCTTAA+TGG | + | chr8.2:10285956-10285975 | None:intergenic | 30.0% | |
| ACAGATAAGAACTACTGAAA+TGG | - | chr8.2:10286991-10287010 | MS.gene26785:intron | 30.0% | |
| ATAATTTGGTTATGTGTCTC+TGG | + | chr8.2:10285887-10285906 | None:intergenic | 30.0% | |
| ATAGTAAATGTGATTGCAGA+TGG | - | chr8.2:10286130-10286149 | MS.gene26785:CDS | 30.0% | |
| ATATAATCTTTAGTCCGAGA+AGG | + | chr8.2:10286884-10286903 | None:intergenic | 30.0% | |
| ATCAAATCATCCAATCTATG+TGG | - | chr8.2:10286849-10286868 | MS.gene26785:intron | 30.0% | |
| ATTGGATGAGAAACTTCATA+TGG | - | chr8.2:10287813-10287832 | MS.gene26785:CDS | 30.0% | |
| ATTTCAGATGTTCCAAAAAC+AGG | - | chr8.2:10287514-10287533 | MS.gene26785:intron | 30.0% | |
| CAACAACCAATTATATGTGT+GGG | - | chr8.2:10285245-10285264 | MS.gene26785:CDS | 30.0% | |
| CAATGAAATTATGACACTCA+AGG | + | chr8.2:10286093-10286112 | None:intergenic | 30.0% | |
| CAGGTATATAATAAGGAGTT+TGG | - | chr8.2:10287856-10287875 | MS.gene26785:CDS | 30.0% | |
| CATATCTTTATGTGGATACA+TGG | - | chr8.2:10286552-10286571 | MS.gene26785:intron | 30.0% | |
| CATTGAGTAGTTAATGTATG+TGG | + | chr8.2:10285464-10285483 | None:intergenic | 30.0% | |
| CTTATCTGTATTTCCATCAA+GGG | + | chr8.2:10286980-10286999 | None:intergenic | 30.0% | |
| CTTGCAAAGATGAATGAATA+CGG | + | chr8.2:10287108-10287127 | None:intergenic | 30.0% | |
| GACATGAAAAAGAAGGAAAT+TGG | - | chr8.2:10287199-10287218 | MS.gene26785:intron | 30.0% | |
| TAAGAACTACTGAAATGGAT+AGG | - | chr8.2:10286996-10287015 | MS.gene26785:intron | 30.0% | |
| TAGCTCAAGTATATATGCTT+TGG | + | chr8.2:10287665-10287684 | None:intergenic | 30.0% | |
| TATAATCTTTAGTCCGAGAA+GGG | + | chr8.2:10286883-10286902 | None:intergenic | 30.0% | |
| TATGTAACTCTAGTGGTATT+TGG | - | chr8.2:10287732-10287751 | MS.gene26785:CDS | 30.0% | |
| TCTTATCTGTATTTCCATCA+AGG | + | chr8.2:10286981-10287000 | None:intergenic | 30.0% | |
| TGGATACAAAAGTTTGCATA+TGG | - | chr8.2:10286922-10286941 | MS.gene26785:intron | 30.0% | |
| TTCCAAGTGCAAATCATAAA+GGG | - | chr8.2:10287315-10287334 | MS.gene26785:intron | 30.0% | |
| TTCTTATATTTCAGAACGGA+GGG | + | chr8.2:10285350-10285369 | None:intergenic | 30.0% | |
| TTGCACTTGGAAAATCTTTA+AGG | + | chr8.2:10287307-10287326 | None:intergenic | 30.0% | |
| TTGCAGTTAACAAAACACAT+AGG | - | chr8.2:10285917-10285936 | MS.gene26785:CDS | 30.0% | |
| TTTCCAAGTGCAAATCATAA+AGG | - | chr8.2:10287314-10287333 | MS.gene26785:intron | 30.0% | |
| TTTCTTATATTTCAGAACGG+AGG | + | chr8.2:10285351-10285370 | None:intergenic | 30.0% | |
| ! | TTTTTCATGTCTAAGGAGTT+AGG | + | chr8.2:10287190-10287209 | None:intergenic | 30.0% |
| !! | AATTTGACATTTTGAGAGCA+AGG | - | chr8.2:10285567-10285586 | MS.gene26785:intron | 30.0% |
| !! | AGATGATAGTGGTTTAATTC+AGG | - | chr8.2:10287837-10287856 | MS.gene26785:CDS | 30.0% |
| !! | AGTGTTGTTTAGTCTCAATT+TGG | - | chr8.2:10285595-10285614 | MS.gene26785:CDS | 30.0% |
| !! | TGACATTAGAGCTTTGATTT+TGG | - | chr8.2:10286355-10286374 | MS.gene26785:CDS | 30.0% |
| !! | TTCCTTCTTTTTCATGTCTA+AGG | + | chr8.2:10287197-10287216 | None:intergenic | 30.0% |
| !! | TTTTTATATTTGAGACCGGA+GGG | - | chr8.2:10285503-10285522 | MS.gene26785:intron | 30.0% |
| !!! | TTTTTTATATTTGAGACCGG+AGG | - | chr8.2:10285502-10285521 | MS.gene26785:intron | 30.0% |
| AAGAAAACAATAACCTCCTC+TGG | + | chr8.2:10287076-10287095 | None:intergenic | 35.0% | |
| AAGATGGTGATAGAACTTGT+CGG | - | chr8.2:10284956-10284975 | MS.gene26785:intron | 35.0% | |
| AATGCATTATCTCCAGACTT+AGG | + | chr8.2:10286797-10286816 | None:intergenic | 35.0% | |
| AGCACATCATTTACATCTTC+TGG | + | chr8.2:10286752-10286771 | None:intergenic | 35.0% | |
| AGGTGATTTGATGTCTTATC+AGG | - | chr8.2:10287534-10287553 | MS.gene26785:CDS | 35.0% | |
| ATAATAAGGAGTTTGGCAAC+AGG | - | chr8.2:10287863-10287882 | MS.gene26785:CDS | 35.0% | |
| ATGCATTATCTCCAGACTTA+GGG | + | chr8.2:10286796-10286815 | None:intergenic | 35.0% | |
| ATTATATTGCCAGGCCAAAA+GGG | - | chr8.2:10286897-10286916 | MS.gene26785:intron | 35.0% | |
| CAAAGTCCCACACATATAAT+TGG | + | chr8.2:10285254-10285273 | None:intergenic | 35.0% | |
| CAATTATATGTGTGGGACTT+TGG | - | chr8.2:10285252-10285271 | MS.gene26785:CDS | 35.0% | |
| CAGTGGATGTAAGTGAAATT+GGG | - | chr8.2:10286945-10286964 | MS.gene26785:intron | 35.0% | |
| CTCCTTAGACATGAAAAAGA+AGG | - | chr8.2:10287192-10287211 | MS.gene26785:intron | 35.0% | |
| CTTTCAATGATTTGACTGAG+AGG | - | chr8.2:10284981-10285000 | MS.gene26785:intron | 35.0% | |
| GAAGATGTAAATGATGTGCT+TGG | - | chr8.2:10286752-10286771 | MS.gene26785:intron | 35.0% | |
| GCAACAACCAATTATATGTG+TGG | - | chr8.2:10285244-10285263 | MS.gene26785:CDS | 35.0% | |
| GGACTAAAGATTATATTGCC+AGG | - | chr8.2:10286888-10286907 | MS.gene26785:intron | 35.0% | |
| GGATTTCTTTCCACATAGAT+TGG | + | chr8.2:10286862-10286881 | None:intergenic | 35.0% | |
| GGCATCTCATTCATTATACA+AGG | - | chr8.2:10287036-10287055 | MS.gene26785:intron | 35.0% | |
| GTGGATGATATCTCAGTTAA+AGG | - | chr8.2:10286671-10286690 | MS.gene26785:intron | 35.0% | |
| TAAGTCTGGAGATAATGCAT+TGG | - | chr8.2:10286796-10286815 | MS.gene26785:intron | 35.0% | |
| TCTCATTCATTATACAAGGC+TGG | - | chr8.2:10287040-10287059 | MS.gene26785:intron | 35.0% | |
| TGAGTTGTATGTAACTCTAG+TGG | - | chr8.2:10287725-10287744 | MS.gene26785:CDS | 35.0% | |
| TGATTTGAAAAGAAGACCAG+AGG | + | chr8.2:10285029-10285048 | None:intergenic | 35.0% | |
| TTACATACAACTCATGAGAC+AGG | + | chr8.2:10287719-10287738 | None:intergenic | 35.0% | |
| TTTCACCAAACACACATGTA+AGG | + | chr8.2:10285766-10285785 | None:intergenic | 35.0% | |
| TTTGTTTGAGAAGAGAATGG+TGG | + | chr8.2:10284817-10284836 | None:intergenic | 35.0% | |
| ! | ATCCCTTTATGATTTGCACT+TGG | + | chr8.2:10287320-10287339 | None:intergenic | 35.0% |
| ! | CTTTTGTATCCATTCCCTTT+TGG | + | chr8.2:10286914-10286933 | None:intergenic | 35.0% |
| ! | GACATCAAATCACCTGTTTT+TGG | + | chr8.2:10287529-10287548 | None:intergenic | 35.0% |
| ! | TGCTTTGGTAATCAGATAGT+TGG | + | chr8.2:10287650-10287669 | None:intergenic | 35.0% |
| !! | ATGGATAAAGCTTTGGAAAG+AGG | + | chr8.2:10285109-10285128 | None:intergenic | 35.0% |
| !! | TAAGCTTAGAAGGTTGATGA+TGG | - | chr8.2:10285692-10285711 | MS.gene26785:CDS | 35.0% |
| !! | TAGAGCTTTGATTTTGGACT+TGG | - | chr8.2:10286361-10286380 | MS.gene26785:CDS | 35.0% |
| !! | TGGTTTGTTTGAGAAGAGAA+TGG | + | chr8.2:10284820-10284839 | None:intergenic | 35.0% |
| !! | TGTGTGTTTGGTGAAACTTT+TGG | - | chr8.2:10285770-10285789 | MS.gene26785:CDS | 35.0% |
| !!! | CTAGTGGTATTTGGTTTTGT+AGG | - | chr8.2:10287741-10287760 | MS.gene26785:CDS | 35.0% |
| AGAATCTGATCCCATACTTG+CGG | - | chr8.2:10286643-10286662 | MS.gene26785:intron | 40.0% | |
| ATCCACTAATTCCGCAAGTA+TGG | + | chr8.2:10286657-10286676 | None:intergenic | 40.0% | |
| ATCTGCTGGAATATTGAGAG+AGG | - | chr8.2:10286166-10286185 | MS.gene26785:CDS | 40.0% | |
| ATGAAGAAGCTCTTGAAGGA+TGG | - | chr8.2:10286719-10286738 | MS.gene26785:intron | 40.0% | |
| CAAAAGTTTGCATATGGCAG+TGG | - | chr8.2:10286928-10286947 | MS.gene26785:intron | 40.0% | |
| CACAATGAAGAAGCTCTTGA+AGG | - | chr8.2:10286715-10286734 | MS.gene26785:intron | 40.0% | |
| CATGAAGTTCGAAGTCAGAT+AGG | - | chr8.2:10286215-10286234 | MS.gene26785:CDS | 40.0% | |
| CATGGCAATGGATAAAGCTT+TGG | + | chr8.2:10285116-10285135 | None:intergenic | 40.0% | |
| CGAGATGGTTCGTAATTTAG+AGG | - | chr8.2:10287765-10287784 | MS.gene26785:CDS | 40.0% | |
| CTGAAATTCATCAGAGCTGA+GGG | + | chr8.2:10287501-10287520 | None:intergenic | 40.0% | |
| CTTCATATGGCAGATGATAG+TGG | - | chr8.2:10287826-10287845 | MS.gene26785:CDS | 40.0% | |
| GATGCAGAAGTTATATCTGC+TGG | - | chr8.2:10286152-10286171 | MS.gene26785:CDS | 40.0% | |
| GATTATATTGCCAGGCCAAA+AGG | - | chr8.2:10286896-10286915 | MS.gene26785:intron | 40.0% | |
| GCAGTGGATGTAAGTGAAAT+TGG | - | chr8.2:10286944-10286963 | MS.gene26785:intron | 40.0% | |
| GTATACCACAATATTCCCTC+CGG | + | chr8.2:10285521-10285540 | None:intergenic | 40.0% | |
| GTTGACCTTACATGTGTGTT+TGG | - | chr8.2:10285758-10285777 | MS.gene26785:CDS | 40.0% | |
| TCCACTAATTCCGCAAGTAT+GGG | + | chr8.2:10286656-10286675 | None:intergenic | 40.0% | |
| TCTAAGGAGTTAGGTCTAGA+TGG | + | chr8.2:10287181-10287200 | None:intergenic | 40.0% | |
| TGATTTGACTGAGAGGATGA+AGG | - | chr8.2:10284988-10285007 | MS.gene26785:intron | 40.0% | |
| TGGATGTAAGTGAAATTGGG+AGG | - | chr8.2:10286948-10286967 | MS.gene26785:intron | 40.0% | |
| TGTGGAAAGAAATCCCTTCT+CGG | - | chr8.2:10286867-10286886 | MS.gene26785:intron | 40.0% | |
| ! | AGATGGGAAGATAAGCATTG+AGG | - | chr8.2:10287388-10287407 | MS.gene26785:intron | 40.0% |
| ! | GAAATGGATAGGTTAGCTGT+TGG | - | chr8.2:10287007-10287026 | MS.gene26785:intron | 40.0% |
| ! | TCTGAAATTCATCAGAGCTG+AGG | + | chr8.2:10287502-10287521 | None:intergenic | 40.0% |
| ! | TGCATCTAGAGTAGACATTC+TGG | - | chr8.2:10286286-10286305 | MS.gene26785:CDS | 40.0% |
| ! | TGGAATATTGAGAGAGGTGT+TGG | - | chr8.2:10286172-10286191 | MS.gene26785:CDS | 40.0% |
| !! | AAGCATTGAGGAACTTACAG+AGG | - | chr8.2:10287400-10287419 | MS.gene26785:intron | 40.0% |
| !! | AGAGCTTTGAAGAACAGGAA+TGG | + | chr8.2:10285062-10285081 | None:intergenic | 40.0% |
| !! | CTTTGAAGCTTGACATGATG+AGG | - | chr8.2:10286384-10286403 | MS.gene26785:CDS | 40.0% |
| !! | GTGTTTGGTGAAACTTTTGG+AGG | - | chr8.2:10285773-10285792 | MS.gene26785:CDS | 40.0% |
| !! | TGACATTTTGAGAGCAAGGA+AGG | - | chr8.2:10285571-10285590 | MS.gene26785:intron | 40.0% |
| !!! | TTTGGTTTTGTAGGTCGAGA+TGG | - | chr8.2:10287750-10287769 | MS.gene26785:CDS | 40.0% |
| AAGAAGACCAGAGGAACTTG+TGG | + | chr8.2:10285020-10285039 | None:intergenic | 45.0% | |
| AGAAGCTCTTGAAGGATGGT+CGG | - | chr8.2:10286723-10286742 | MS.gene26785:intron | 45.0% | |
| AGGTTCTGCTACTGCTCATT+TGG | - | chr8.2:10286235-10286254 | MS.gene26785:CDS | 45.0% | |
| ATGATCTGCTGCTGATACCT+TGG | + | chr8.2:10286425-10286444 | None:intergenic | 45.0% | |
| ATGTCATGTGCATCTTCTCC+TGG | + | chr8.2:10287446-10287465 | None:intergenic | 45.0% | |
| GCGTTTAAAGACCATCATGC+TGG | - | chr8.2:10287256-10287275 | MS.gene26785:intron | 45.0% | |
| GGAACTTACAGAGGTGATAG+AGG | - | chr8.2:10287409-10287428 | MS.gene26785:intron | 45.0% | |
| GGAAGAAGAGTGAGAGTAAG+CGG | + | chr8.2:10284856-10284875 | None:intergenic | 45.0% | |
| GGAGATAATGCATTGGAAGC+TGG | - | chr8.2:10286803-10286822 | MS.gene26785:intron | 45.0% | |
| GGATACATGGTTGAGAAGTC+AGG | - | chr8.2:10286565-10286584 | MS.gene26785:intron | 45.0% | |
| GTGTTATCCACAAGTTCCTC+TGG | - | chr8.2:10285010-10285029 | MS.gene26785:intron | 45.0% | |
| TATCACCATCTTTCCTCCAC+CGG | + | chr8.2:10284948-10284967 | None:intergenic | 45.0% | |
| TCCCATACTTGCGGAATTAG+TGG | - | chr8.2:10286652-10286671 | MS.gene26785:intron | 45.0% | |
| TTCTCGACAAGAACGGAGAT+GGG | - | chr8.2:10287372-10287391 | MS.gene26785:intron | 45.0% | |
| TTTCGCCTTCTCGACAAGAA+CGG | - | chr8.2:10287365-10287384 | MS.gene26785:intron | 45.0% | |
| ! | ATGGATAGGTTAGCTGTTGG+TGG | - | chr8.2:10287010-10287029 | MS.gene26785:intron | 45.0% |
| ! | CTTCTTGACTCGAACAGTGA+TGG | - | chr8.2:10287473-10287492 | MS.gene26785:intron | 45.0% |
| ! | CTTGACATGATGAGGCATCT+TGG | - | chr8.2:10286392-10286411 | MS.gene26785:CDS | 45.0% |
| ! | TAGGTTAGCTGTTGGTGGAA+TGG | - | chr8.2:10287015-10287034 | MS.gene26785:intron | 45.0% |
| ! | TGGTCTTACTAATCCAGAGG+AGG | - | chr8.2:10287060-10287079 | MS.gene26785:intron | 45.0% |
| !! | AGAGGAGAGCTTTGAAGAAC+AGG | + | chr8.2:10285067-10285086 | None:intergenic | 45.0% |
| !! | TTGAGAGAGGTGTTGGAAGT+AGG | - | chr8.2:10286179-10286198 | MS.gene26785:CDS | 45.0% |
| ACAGAGGTGATAGAGGAGCT+TGG | - | chr8.2:10287416-10287435 | MS.gene26785:intron | 50.0% | |
| ACTTCTACAGCACACGCTCT+TGG | + | chr8.2:10284923-10284942 | None:intergenic | 50.0% | |
| AGCTCTCCTCTTACTCCTGA+TGG | - | chr8.2:10285076-10285095 | MS.gene26785:intron | 50.0% | |
| ATCACCATCTTTCCTCCACC+GGG | + | chr8.2:10284947-10284966 | None:intergenic | 50.0% | |
| ATTCCCACAGCATGAGCAAG+AGG | + | chr8.2:10286476-10286495 | None:intergenic | 50.0% | |
| ATTGCCAGGCCAAAAGGGAA+TGG | - | chr8.2:10286902-10286921 | MS.gene26785:intron | 50.0% | |
| CATCTCCGTTCTTGTCGAGA+AGG | + | chr8.2:10287373-10287392 | None:intergenic | 50.0% | |
| CATGCTTCTCGCTGATCTTC+AGG | - | chr8.2:10285132-10285151 | MS.gene26785:intron | 50.0% | |
| CTGAAGATCAGCGAGAAGCA+TGG | + | chr8.2:10285134-10285153 | None:intergenic | 50.0% | |
| CTTCTCGACAAGAACGGAGA+TGG | - | chr8.2:10287371-10287390 | MS.gene26785:intron | 50.0% | |
| GAAAGAGGAGAACGACCATC+AGG | + | chr8.2:10285094-10285113 | None:intergenic | 50.0% | |
| GAACGACCATCAGGAGTAAG+AGG | + | chr8.2:10285085-10285104 | None:intergenic | 50.0% | |
| TAAGCGGTGATGAGTGGTAG+TGG | + | chr8.2:10284840-10284859 | None:intergenic | 50.0% | |
| TCTGCTGCTGATACCTTGGA+AGG | + | chr8.2:10286421-10286440 | None:intergenic | 50.0% | |
| TGAGACCGGAGGGAATATTG+TGG | - | chr8.2:10285513-10285532 | MS.gene26785:intron | 50.0% | |
| TGAGAGTAAGCGGTGATGAG+TGG | + | chr8.2:10284846-10284865 | None:intergenic | 50.0% | |
| TGGTTGAGAAGTCAGGAGAC+AGG | - | chr8.2:10286572-10286591 | MS.gene26785:intron | 50.0% | |
| TTGAGAAGTCAGGAGACAGG+TGG | - | chr8.2:10286575-10286594 | MS.gene26785:intron | 50.0% | |
| ! | ATCAGCGAGAAGCATGGCAA+TGG | + | chr8.2:10285128-10285147 | None:intergenic | 50.0% |
| ! | GTATCCATTCCCTTTTGGCC+TGG | + | chr8.2:10286909-10286928 | None:intergenic | 50.0% |
| ! | GTGGTGTTGAACCCTAAGTC+TGG | - | chr8.2:10286782-10286801 | MS.gene26785:intron | 50.0% |
| !! | GGCTGGTCTTACTAATCCAG+AGG | - | chr8.2:10287057-10287076 | MS.gene26785:intron | 50.0% |
| AGCACACGCTCTTGGAGTAC+TGG | + | chr8.2:10284915-10284934 | None:intergenic | 55.0% | |
| AGTTCCCGGTGGAGGAAAGA+TGG | - | chr8.2:10284940-10284959 | MS.gene26785:intron | 55.0% | |
| GCGTGTGCTGTAGAAGTTCC+CGG | - | chr8.2:10284926-10284945 | MS.gene26785:intron | 55.0% | |
| GCTCCTCTTGCTCATGCTGT+GGG | - | chr8.2:10286470-10286489 | MS.gene26785:CDS | 55.0% | |
| GGCATCTTGGTCACCTTCCA+AGG | - | chr8.2:10286405-10286424 | MS.gene26785:CDS | 55.0% | |
| TGATGTGCTTGGACTGCGAG+TGG | - | chr8.2:10286763-10286782 | MS.gene26785:intron | 55.0% | |
| TGCTCCTCTTGCTCATGCTG+TGG | - | chr8.2:10286469-10286488 | MS.gene26785:CDS | 55.0% | |
| TGGGAGGACTAGACCCTTGA+TGG | - | chr8.2:10286964-10286983 | MS.gene26785:intron | 55.0% | |
| TGTGCTGTAGAAGTTCCCGG+TGG | - | chr8.2:10284929-10284948 | MS.gene26785:intron | 55.0% | |
| TTCAGCTGCAGCCAGCATGA+TGG | + | chr8.2:10287270-10287289 | None:intergenic | 55.0% | |
| ! | AGAAGAGAATGGTGGCGCGT+GGG | + | chr8.2:10284809-10284828 | None:intergenic | 55.0% |
| ! | TGGAGAGAGAGCGTGCTACA+GGG | - | chr8.2:10286823-10286842 | MS.gene26785:intron | 55.0% |
| !! | ATAGAGGAGCTTGGTGCACC+AGG | - | chr8.2:10287425-10287444 | MS.gene26785:intron | 55.0% |
| !! | CTCTTGGAGTACTGGACCAC+CGG | + | chr8.2:10284907-10284926 | None:intergenic | 55.0% |
| GCTGTAGAAGTTCCCGGTGG+AGG | - | chr8.2:10284932-10284951 | MS.gene26785:intron | 60.0% | |
| ! | AGTACTGGACCACCGGAGAC+CGG | + | chr8.2:10284900-10284919 | None:intergenic | 60.0% |
| ! | ATGGTGGCGCGTGGGGTAAT+CGG | + | chr8.2:10284801-10284820 | None:intergenic | 60.0% |
| ! | CATGCTGGCTGCAGCTGAAC+TGG | - | chr8.2:10287271-10287290 | MS.gene26785:intron | 60.0% |
| ! | CTGGAGAGAGAGCGTGCTAC+AGG | - | chr8.2:10286822-10286841 | MS.gene26785:intron | 60.0% |
| ! | GAAGAGAATGGTGGCGCGTG+GGG | + | chr8.2:10284808-10284827 | None:intergenic | 60.0% |
| ! | GAGAAGAGAATGGTGGCGCG+TGG | + | chr8.2:10284810-10284829 | None:intergenic | 60.0% |
| GCGTGGGGTAATCGGAAGCG+TGG | + | chr8.2:10284793-10284812 | None:intergenic | 65.0% | |
| ACCACCGGAGACCGGTGACG+CGG | + | chr8.2:10284892-10284911 | None:intergenic | 70.0% | |
| ACTCGACCCACCCGCGTCAC+CGG | - | chr8.2:10284878-10284897 | MS.gene26785:CDS | 70.0% | |
| GTGACGCGGGTGGGTCGAGT+GGG | + | chr8.2:10284878-10284897 | None:intergenic | 70.0% | |
| TGACGCGGGTGGGTCGAGTG+GGG | + | chr8.2:10284877-10284896 | None:intergenic | 70.0% | |
| CCACCCGCGTCACCGGTCTC+CGG | - | chr8.2:10284885-10284904 | MS.gene26785:CDS | 75.0% | |
| CCACCGGAGACCGGTGACGC+GGG | + | chr8.2:10284891-10284910 | None:intergenic | 75.0% | |
| CGGAGACCGGTGACGCGGGT+GGG | + | chr8.2:10284887-10284906 | None:intergenic | 75.0% | |
| GGTGACGCGGGTGGGTCGAG+TGG | + | chr8.2:10284879-10284898 | None:intergenic | 75.0% | |
| ! | CCCGCGTCACCGGTCTCCGG+TGG | - | chr8.2:10284888-10284907 | MS.gene26785:CDS | 80.0% |
| ! | CCGGAGACCGGTGACGCGGG+TGG | + | chr8.2:10284888-10284907 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 10284773 | 10287897 | 10284773 | ID=MS.gene26785 |
| chr8.2 | mRNA | 10284773 | 10287897 | 10284773 | ID=MS.gene26785.t1;Parent=MS.gene26785 |
| chr8.2 | exon | 10287517 | 10287897 | 10287517 | ID=MS.gene26785.t1.exon1;Parent=MS.gene26785.t1 |
| chr8.2 | CDS | 10287517 | 10287897 | 10287517 | ID=cds.MS.gene26785.t1;Parent=MS.gene26785.t1 |
| chr8.2 | exon | 10285589 | 10286521 | 10285589 | ID=MS.gene26785.t1.exon2;Parent=MS.gene26785.t1 |
| chr8.2 | CDS | 10285589 | 10286521 | 10285589 | ID=cds.MS.gene26785.t1;Parent=MS.gene26785.t1 |
| chr8.2 | exon | 10285135 | 10285419 | 10285135 | ID=MS.gene26785.t1.exon3;Parent=MS.gene26785.t1 |
| chr8.2 | CDS | 10285135 | 10285419 | 10285135 | ID=cds.MS.gene26785.t1;Parent=MS.gene26785.t1 |
| chr8.2 | exon | 10284773 | 10284907 | 10284773 | ID=MS.gene26785.t1.exon4;Parent=MS.gene26785.t1 |
| chr8.2 | CDS | 10284773 | 10284907 | 10284773 | ID=cds.MS.gene26785.t1;Parent=MS.gene26785.t1 |
| Gene Sequence |
| Protein sequence |
