Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68625.t1 | XP_003609875.1 | 95 | 580 | 25 | 2 | 1 | 576 | 1 | 580 | 6.40E-298 | 1032.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68625.t1 | Q84R11 | 69.0 | 523 | 155 | 3 | 59 | 574 | 58 | 580 | 1.2e-191 | 671.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68625.t1 | G7JR05 | 95.0 | 580 | 25 | 2 | 1 | 576 | 1 | 580 | 4.6e-298 | 1032.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene68625 | 0.809212 | 2.12E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene68625 | 0.826764 | 2.27E-54 | -1.69E-46 |
| MS.gene049222 | MS.gene68625 | 0.880022 | 7.73E-70 | -1.69E-46 |
| MS.gene049232 | MS.gene68625 | 0.901901 | 1.68E-78 | -1.69E-46 |
| MS.gene049259 | MS.gene68625 | -0.803278 | 3.76E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene68625 | 0.83504 | 2.12E-56 | -1.69E-46 |
| MS.gene049320 | MS.gene68625 | 0.855609 | 5.62E-62 | -1.69E-46 |
| MS.gene049396 | MS.gene68625 | 0.815963 | 7.06E-52 | -1.69E-46 |
| MS.gene049600 | MS.gene68625 | 0.824268 | 8.85E-54 | -1.69E-46 |
| MS.gene049611 | MS.gene68625 | -0.807878 | 4.08E-50 | -1.69E-46 |
| MS.gene049633 | MS.gene68625 | 0.836098 | 1.14E-56 | -1.69E-46 |
| MS.gene049656 | MS.gene68625 | 0.812162 | 4.87E-51 | -1.69E-46 |
| MS.gene049657 | MS.gene68625 | 0.815312 | 9.86E-52 | -1.69E-46 |
| MS.gene049865 | MS.gene68625 | 0.803409 | 3.53E-49 | -1.69E-46 |
| MS.gene050082 | MS.gene68625 | -0.818925 | 1.52E-52 | -1.69E-46 |
| MS.gene05010 | MS.gene68625 | 0.860135 | 2.55E-63 | -1.69E-46 |
| MS.gene050163 | MS.gene68625 | 0.828932 | 6.83E-55 | -1.69E-46 |
| MS.gene050165 | MS.gene68625 | 0.836174 | 1.09E-56 | -1.69E-46 |
| MS.gene050170 | MS.gene68625 | 0.863129 | 3.10E-64 | -1.69E-46 |
| MS.gene050216 | MS.gene68625 | 0.879677 | 1.03E-69 | -1.69E-46 |
| MS.gene050323 | MS.gene68625 | 0.882457 | 1.02E-70 | -1.69E-46 |
| MS.gene050333 | MS.gene68625 | 0.829027 | 6.47E-55 | -1.69E-46 |
| MS.gene050380 | MS.gene68625 | -0.805717 | 1.17E-49 | -1.69E-46 |
| MS.gene050381 | MS.gene68625 | -0.833834 | 4.25E-56 | -1.69E-46 |
| MS.gene050496 | MS.gene68625 | 0.850412 | 1.73E-60 | -1.69E-46 |
| MS.gene050499 | MS.gene68625 | 0.823162 | 1.61E-53 | -1.69E-46 |
| MS.gene050502 | MS.gene68625 | 0.845332 | 4.34E-59 | -1.69E-46 |
| MS.gene050504 | MS.gene68625 | 0.878594 | 2.48E-69 | -1.69E-46 |
| MS.gene050518 | MS.gene68625 | 0.863554 | 2.29E-64 | -1.69E-46 |
| MS.gene050577 | MS.gene68625 | 0.864363 | 1.28E-64 | -1.69E-46 |
| MS.gene050612 | MS.gene68625 | 0.864544 | 1.13E-64 | -1.69E-46 |
| MS.gene050662 | MS.gene68625 | 0.822463 | 2.34E-53 | -1.69E-46 |
| MS.gene050675 | MS.gene68625 | 0.842155 | 3.07E-58 | -1.69E-46 |
| MS.gene050697 | MS.gene68625 | 0.839336 | 1.68E-57 | -1.69E-46 |
| MS.gene050699 | MS.gene68625 | 0.81083 | 9.49E-51 | -1.69E-46 |
| MS.gene050747 | MS.gene68625 | 0.836094 | 1.14E-56 | -1.69E-46 |
| MS.gene050772 | MS.gene68625 | 0.822099 | 2.84E-53 | -1.69E-46 |
| MS.gene05080 | MS.gene68625 | 0.843131 | 1.69E-58 | -1.69E-46 |
| MS.gene050868 | MS.gene68625 | 0.904044 | 1.85E-79 | -1.69E-46 |
| MS.gene050871 | MS.gene68625 | 0.90581 | 2.89E-80 | -1.69E-46 |
| MS.gene050876 | MS.gene68625 | 0.843007 | 1.83E-58 | -1.69E-46 |
| MS.gene050883 | MS.gene68625 | -0.810827 | 9.50E-51 | -1.69E-46 |
| MS.gene050904 | MS.gene68625 | 0.874819 | 5.01E-68 | -1.69E-46 |
| MS.gene050950 | MS.gene68625 | 0.83065 | 2.61E-55 | -1.69E-46 |
| MS.gene050986 | MS.gene68625 | 0.857958 | 1.14E-62 | -1.69E-46 |
| MS.gene05104 | MS.gene68625 | -0.811011 | 8.67E-51 | -1.69E-46 |
| MS.gene051127 | MS.gene68625 | -0.800259 | 1.57E-48 | -1.69E-46 |
| MS.gene051138 | MS.gene68625 | -0.81076 | 9.82E-51 | -1.69E-46 |
| MS.gene05118 | MS.gene68625 | 0.821202 | 4.58E-53 | -1.69E-46 |
| MS.gene051268 | MS.gene68625 | 0.854305 | 1.34E-61 | -1.69E-46 |
| MS.gene051317 | MS.gene68625 | 0.821083 | 4.88E-53 | -1.69E-46 |
| MS.gene051509 | MS.gene68625 | 0.88316 | 5.67E-71 | -1.69E-46 |
| MS.gene051551 | MS.gene68625 | 0.820317 | 7.31E-53 | -1.69E-46 |
| MS.gene051560 | MS.gene68625 | 0.827768 | 1.30E-54 | -1.69E-46 |
| MS.gene051863 | MS.gene68625 | -0.804628 | 1.97E-49 | -1.69E-46 |
| MS.gene051874 | MS.gene68625 | 0.815958 | 7.08E-52 | -1.69E-46 |
| MS.gene051941 | MS.gene68625 | 0.804395 | 2.20E-49 | -1.69E-46 |
| MS.gene052066 | MS.gene68625 | 0.863946 | 1.73E-64 | -1.69E-46 |
| MS.gene052164 | MS.gene68625 | 0.871617 | 5.96E-67 | -1.69E-46 |
| MS.gene052482 | MS.gene68625 | 0.881196 | 2.93E-70 | -1.69E-46 |
| MS.gene052486 | MS.gene68625 | 0.881545 | 2.20E-70 | -1.69E-46 |
| MS.gene052494 | MS.gene68625 | -0.81091 | 9.11E-51 | -1.69E-46 |
| MS.gene052503 | MS.gene68625 | 0.815186 | 1.05E-51 | -1.69E-46 |
| MS.gene052506 | MS.gene68625 | 0.803105 | 4.09E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene68625 | 0.807576 | 4.72E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene68625 | 0.816699 | 4.83E-52 | -1.69E-46 |
| MS.gene052825 | MS.gene68625 | 0.812946 | 3.28E-51 | -1.69E-46 |
| MS.gene052916 | MS.gene68625 | 0.800119 | 1.67E-48 | -1.69E-46 |
| MS.gene052966 | MS.gene68625 | 0.849811 | 2.54E-60 | -1.69E-46 |
| MS.gene053203 | MS.gene68625 | 0.841444 | 4.73E-58 | -1.69E-46 |
| MS.gene053213 | MS.gene68625 | 0.825187 | 5.38E-54 | -1.69E-46 |
| MS.gene053286 | MS.gene68625 | 0.830598 | 2.68E-55 | -1.69E-46 |
| MS.gene053420 | MS.gene68625 | -0.849281 | 3.58E-60 | -1.69E-46 |
| MS.gene053421 | MS.gene68625 | -0.801067 | 1.07E-48 | -1.69E-46 |
| MS.gene053436 | MS.gene68625 | 0.825083 | 5.69E-54 | -1.69E-46 |
| MS.gene053479 | MS.gene68625 | 0.807078 | 6.03E-50 | -1.69E-46 |
| MS.gene053505 | MS.gene68625 | 0.812831 | 3.48E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene68625 | 0.85695 | 2.27E-62 | -1.69E-46 |
| MS.gene053626 | MS.gene68625 | 0.888711 | 4.63E-73 | -1.69E-46 |
| MS.gene053633 | MS.gene68625 | 0.851045 | 1.15E-60 | -1.69E-46 |
| MS.gene053824 | MS.gene68625 | 0.825662 | 4.15E-54 | -1.69E-46 |
| MS.gene053916 | MS.gene68625 | 0.806361 | 8.54E-50 | -1.69E-46 |
| MS.gene054003 | MS.gene68625 | 0.841531 | 4.49E-58 | -1.69E-46 |
| MS.gene054408 | MS.gene68625 | 0.829796 | 4.21E-55 | -1.69E-46 |
| MS.gene054595 | MS.gene68625 | 0.87503 | 4.25E-68 | -1.69E-46 |
| MS.gene054616 | MS.gene68625 | -0.802145 | 6.45E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene68625 | 0.816548 | 5.23E-52 | -1.69E-46 |
| MS.gene054706 | MS.gene68625 | -0.816211 | 6.22E-52 | -1.69E-46 |
| MS.gene054707 | MS.gene68625 | -0.807638 | 4.58E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene68625 | 0.847676 | 9.95E-60 | -1.69E-46 |
| MS.gene054954 | MS.gene68625 | 0.854871 | 9.22E-62 | -1.69E-46 |
| MS.gene055154 | MS.gene68625 | -0.817548 | 3.11E-52 | -1.69E-46 |
| MS.gene055202 | MS.gene68625 | -0.819219 | 1.30E-52 | -1.69E-46 |
| MS.gene055224 | MS.gene68625 | 0.802527 | 5.38E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene68625 | 0.836874 | 7.25E-57 | -1.69E-46 |
| MS.gene055502 | MS.gene68625 | 0.852601 | 4.15E-61 | -1.69E-46 |
| MS.gene055577 | MS.gene68625 | 0.843178 | 1.64E-58 | -1.69E-46 |
| MS.gene055748 | MS.gene68625 | 0.859141 | 5.08E-63 | -1.69E-46 |
| MS.gene055750 | MS.gene68625 | 0.895764 | 7.03E-76 | -1.69E-46 |
| MS.gene055751 | MS.gene68625 | 0.873238 | 1.72E-67 | -1.69E-46 |
| MS.gene055776 | MS.gene68625 | 0.832996 | 6.87E-56 | -1.69E-46 |
| MS.gene05589 | MS.gene68625 | 0.880355 | 5.88E-70 | -1.69E-46 |
| MS.gene055941 | MS.gene68625 | 0.817669 | 2.93E-52 | -1.69E-46 |
| MS.gene056040 | MS.gene68625 | 0.821145 | 4.72E-53 | -1.69E-46 |
| MS.gene056046 | MS.gene68625 | 0.821226 | 4.52E-53 | -1.69E-46 |
| MS.gene056166 | MS.gene68625 | 0.845623 | 3.62E-59 | -1.69E-46 |
| MS.gene056310 | MS.gene68625 | -0.811902 | 5.55E-51 | -1.69E-46 |
| MS.gene056311 | MS.gene68625 | -0.816233 | 6.14E-52 | -1.69E-46 |
| MS.gene056313 | MS.gene68625 | -0.803794 | 2.94E-49 | -1.69E-46 |
| MS.gene056387 | MS.gene68625 | 0.849082 | 4.06E-60 | -1.69E-46 |
| MS.gene056422 | MS.gene68625 | 0.826671 | 2.39E-54 | -1.69E-46 |
| MS.gene056446 | MS.gene68625 | 0.842347 | 2.73E-58 | -1.69E-46 |
| MS.gene056450 | MS.gene68625 | 0.829714 | 4.41E-55 | -1.69E-46 |
| MS.gene056487 | MS.gene68625 | 0.801132 | 1.04E-48 | -1.69E-46 |
| MS.gene056504 | MS.gene68625 | 0.903179 | 4.53E-79 | -1.69E-46 |
| MS.gene056510 | MS.gene68625 | 0.873306 | 1.63E-67 | -1.69E-46 |
| MS.gene056549 | MS.gene68625 | 0.853599 | 2.15E-61 | -1.69E-46 |
| MS.gene056657 | MS.gene68625 | 0.854833 | 9.46E-62 | -1.69E-46 |
| MS.gene056692 | MS.gene68625 | 0.813078 | 3.07E-51 | -1.69E-46 |
| MS.gene056878 | MS.gene68625 | 0.829764 | 4.29E-55 | -1.69E-46 |
| MS.gene057076 | MS.gene68625 | 0.800073 | 1.71E-48 | -1.69E-46 |
| MS.gene057086 | MS.gene68625 | 0.848226 | 7.01E-60 | -1.69E-46 |
| MS.gene057687 | MS.gene68625 | 0.834442 | 2.99E-56 | -1.69E-46 |
| MS.gene057734 | MS.gene68625 | 0.804323 | 2.28E-49 | -1.69E-46 |
| MS.gene057831 | MS.gene68625 | 0.829001 | 6.57E-55 | -1.69E-46 |
| MS.gene057872 | MS.gene68625 | 0.860559 | 1.90E-63 | -1.69E-46 |
| MS.gene05787 | MS.gene68625 | 0.876312 | 1.54E-68 | -1.69E-46 |
| MS.gene057926 | MS.gene68625 | 0.803836 | 2.88E-49 | -1.69E-46 |
| MS.gene058041 | MS.gene68625 | 0.840612 | 7.83E-58 | -1.69E-46 |
| MS.gene058108 | MS.gene68625 | -0.803472 | 3.43E-49 | -1.69E-46 |
| MS.gene058109 | MS.gene68625 | -0.819565 | 1.09E-52 | -1.69E-46 |
| MS.gene058111 | MS.gene68625 | -0.813383 | 2.63E-51 | -1.69E-46 |
| MS.gene058130 | MS.gene68625 | 0.80621 | 9.19E-50 | -1.69E-46 |
| MS.gene058157 | MS.gene68625 | 0.864125 | 1.52E-64 | -1.69E-46 |
| MS.gene058170 | MS.gene68625 | -0.805249 | 1.46E-49 | -1.69E-46 |
| MS.gene058171 | MS.gene68625 | -0.884497 | 1.82E-71 | -1.69E-46 |
| MS.gene058173 | MS.gene68625 | -0.884211 | 2.33E-71 | -1.69E-46 |
| MS.gene058175 | MS.gene68625 | -0.885288 | 9.25E-72 | -1.69E-46 |
| MS.gene058335 | MS.gene68625 | 0.812264 | 4.63E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene68625 | 0.857234 | 1.88E-62 | -1.69E-46 |
| MS.gene058419 | MS.gene68625 | 0.833535 | 5.04E-56 | -1.69E-46 |
| MS.gene058420 | MS.gene68625 | 0.816171 | 6.35E-52 | -1.69E-46 |
| MS.gene058773 | MS.gene68625 | 0.829341 | 5.43E-55 | -1.69E-46 |
| MS.gene059022 | MS.gene68625 | 0.84701 | 1.52E-59 | -1.69E-46 |
| MS.gene059023 | MS.gene68625 | 0.806444 | 8.20E-50 | -1.69E-46 |
| MS.gene059037 | MS.gene68625 | -0.817353 | 3.45E-52 | -1.69E-46 |
| MS.gene059045 | MS.gene68625 | -0.856655 | 2.78E-62 | -1.69E-46 |
| MS.gene05913 | MS.gene68625 | 0.835361 | 1.76E-56 | -1.69E-46 |
| MS.gene059305 | MS.gene68625 | 0.825488 | 4.56E-54 | -1.69E-46 |
| MS.gene059367 | MS.gene68625 | 0.881028 | 3.37E-70 | -1.69E-46 |
| MS.gene059368 | MS.gene68625 | 0.825424 | 4.72E-54 | -1.69E-46 |
| MS.gene059517 | MS.gene68625 | 0.807855 | 4.12E-50 | -1.69E-46 |
| MS.gene059526 | MS.gene68625 | -0.800997 | 1.11E-48 | -1.69E-46 |
| MS.gene059667 | MS.gene68625 | 0.832535 | 8.94E-56 | -1.69E-46 |
| MS.gene059677 | MS.gene68625 | 0.82086 | 5.49E-53 | -1.69E-46 |
| MS.gene059718 | MS.gene68625 | 0.825171 | 5.42E-54 | -1.69E-46 |
| MS.gene059801 | MS.gene68625 | 0.830196 | 3.36E-55 | -1.69E-46 |
| MS.gene059837 | MS.gene68625 | 0.808501 | 3.00E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene68625 | 0.901635 | 2.19E-78 | -1.69E-46 |
| MS.gene06000 | MS.gene68625 | 0.864037 | 1.62E-64 | -1.69E-46 |
| MS.gene060187 | MS.gene68625 | -0.824731 | 6.88E-54 | -1.69E-46 |
| MS.gene060295 | MS.gene68625 | 0.85138 | 9.21E-61 | -1.69E-46 |
| MS.gene060339 | MS.gene68625 | 0.813216 | 2.86E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene68625 | 0.829695 | 4.46E-55 | -1.69E-46 |
| MS.gene060593 | MS.gene68625 | -0.804049 | 2.60E-49 | -1.69E-46 |
| MS.gene060595 | MS.gene68625 | -0.877787 | 4.75E-69 | -1.69E-46 |
| MS.gene060703 | MS.gene68625 | 0.835184 | 1.95E-56 | -1.69E-46 |
| MS.gene060762 | MS.gene68625 | 0.868824 | 4.90E-66 | -1.69E-46 |
| MS.gene060778 | MS.gene68625 | 0.913319 | 7.06E-84 | -1.69E-46 |
| MS.gene06077 | MS.gene68625 | 0.883326 | 4.93E-71 | -1.69E-46 |
| MS.gene06097 | MS.gene68625 | 0.857385 | 1.69E-62 | -1.69E-46 |
| MS.gene060982 | MS.gene68625 | 0.88992 | 1.57E-73 | -1.69E-46 |
| MS.gene061134 | MS.gene68625 | 0.84807 | 7.75E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene09808 | MS.gene68625 | PPI |
| MS.gene68625 | MS.gene22464 | PPI |
| MS.gene073783 | MS.gene68625 | PPI |
| MS.gene007461 | MS.gene68625 | PPI |
| MS.gene68625 | MS.gene20038 | PPI |
| MS.gene68625 | MS.gene30905 | PPI |
| MS.gene073784 | MS.gene68625 | PPI |
| MS.gene68625 | MS.gene067520 | PPI |
| MS.gene029871 | MS.gene68625 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68625.t1 | MTR_4g123930 | 96.207 | 580 | 18 | 2 | 1 | 576 | 1 | 580 | 0.0 | 1135 |
| MS.gene68625.t1 | MTR_4g123930 | 98.000 | 450 | 9 | 0 | 127 | 576 | 1 | 450 | 0.0 | 905 |
| MS.gene68625.t1 | MTR_4g123930 | 94.796 | 442 | 19 | 2 | 1 | 438 | 1 | 442 | 0.0 | 855 |
| MS.gene68625.t1 | MTR_4g123930 | 96.795 | 312 | 10 | 0 | 127 | 438 | 1 | 312 | 0.0 | 625 |
| MS.gene68625.t1 | MTR_7g108940 | 29.752 | 363 | 218 | 8 | 116 | 452 | 175 | 526 | 4.93e-40 | 156 |
| MS.gene68625.t1 | MTR_7g108940 | 29.752 | 363 | 218 | 8 | 116 | 452 | 175 | 526 | 6.73e-40 | 156 |
| MS.gene68625.t1 | MTR_8g020880 | 29.261 | 352 | 212 | 7 | 108 | 452 | 242 | 563 | 1.35e-33 | 136 |
| MS.gene68625.t1 | MTR_8g020880 | 29.261 | 352 | 212 | 7 | 108 | 452 | 242 | 563 | 1.44e-33 | 136 |
| MS.gene68625.t1 | MTR_5g007870 | 36.719 | 128 | 74 | 3 | 303 | 429 | 443 | 564 | 2.27e-14 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68625.t1 | AT3G17470 | 69.275 | 524 | 154 | 3 | 58 | 574 | 72 | 595 | 0.0 | 714 |
| MS.gene68625.t1 | AT3G17470 | 69.275 | 524 | 154 | 3 | 58 | 574 | 57 | 580 | 0.0 | 713 |
| MS.gene68625.t1 | AT3G17470 | 68.668 | 383 | 118 | 1 | 58 | 438 | 57 | 439 | 0.0 | 545 |
| MS.gene68625.t1 | AT1G54130 | 32.530 | 332 | 191 | 7 | 108 | 431 | 234 | 540 | 4.27e-38 | 150 |
| MS.gene68625.t1 | AT3G14050 | 32.530 | 332 | 190 | 9 | 109 | 431 | 230 | 536 | 6.40e-37 | 146 |
| MS.gene68625.t1 | AT4G02260 | 29.969 | 327 | 199 | 7 | 116 | 423 | 177 | 492 | 8.79e-37 | 146 |
| MS.gene68625.t1 | AT4G02260 | 29.787 | 329 | 201 | 7 | 116 | 425 | 177 | 494 | 1.07e-36 | 146 |
| MS.gene68625.t1 | AT4G02260 | 29.787 | 329 | 201 | 7 | 116 | 425 | 177 | 494 | 1.26e-36 | 146 |
| MS.gene68625.t1 | AT4G02260 | 29.697 | 330 | 201 | 8 | 116 | 425 | 177 | 495 | 4.11e-35 | 141 |
Find 143 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCACTTGGAAAATCTTTA+AGG | 0.162251 | 8.1:+7524519 | None:intergenic |
| TGACATTAGAGCTTTGATTT+TGG | 0.217842 | 8.1:-7525468 | MS.gene68625:CDS |
| ATCCACTAATTCCGCAAGTA+TGG | 0.254255 | 8.1:+7525169 | None:intergenic |
| AGCACATCATTTACATCTTC+TGG | 0.271709 | 8.1:+7525074 | None:intergenic |
| CATGCTGGCTGCAGCTGAAC+TGG | 0.295606 | 8.1:-7524552 | MS.gene68625:CDS |
| CATGCTTCTCGCTGATCTTC+AGG | 0.298040 | 8.1:-7526661 | MS.gene68625:intron |
| GCAGTGGATGTAAGTGAAAT+TGG | 0.300443 | 8.1:-7524879 | MS.gene68625:CDS |
| TAACTACATATCACTTGAAT+TGG | 0.301558 | 8.1:-7525327 | MS.gene68625:CDS |
| CAGGTATATAATAAGGAGTT+TGG | 0.304931 | 8.1:-7523967 | MS.gene68625:CDS |
| TTTCCAAGTGCAAATCATAA+AGG | 0.319956 | 8.1:-7524509 | MS.gene68625:CDS |
| TTTAATTCAGGTATATAATA+AGG | 0.339845 | 8.1:-7523974 | MS.gene68625:CDS |
| AGAGGAGAGCTTTGAAGAAC+AGG | 0.345980 | 8.1:+7526729 | None:intergenic |
| GTGGATGATATCTCAGTTAA+AGG | 0.351684 | 8.1:-7525152 | MS.gene68625:CDS |
| TGCATCTAGAGTAGACATTC+TGG | 0.356083 | 8.1:-7525537 | MS.gene68625:CDS |
| TCCACATAAAGATATGAATA+AGG | 0.356386 | 8.1:+7525278 | None:intergenic |
| GGATTTCTTTCCACATAGAT+TGG | 0.373050 | 8.1:+7524964 | None:intergenic |
| AATGCATTATCTCCAGACTT+AGG | 0.376086 | 8.1:+7525029 | None:intergenic |
| AGGTTCTGCTACTGCTCATT+TGG | 0.380091 | 8.1:-7525588 | MS.gene68625:CDS |
| CTGGAGAGAGAGCGTGCTAC+AGG | 0.382710 | 8.1:-7525001 | MS.gene68625:CDS |
| TTCCAAGTGCAAATCATAAA+GGG | 0.388198 | 8.1:-7524508 | MS.gene68625:CDS |
| TGGGAGGACTAGACCCTTGA+TGG | 0.390942 | 8.1:-7524859 | MS.gene68625:CDS |
| GATTATATTGCCAGGCCAAA+AGG | 0.405490 | 8.1:-7524927 | MS.gene68625:CDS |
| ACAGATAAGAACTACTGAAA+TGG | 0.407491 | 8.1:-7524832 | MS.gene68625:CDS |
| TGATGAATACAAGAAAATAT+TGG | 0.408026 | 8.1:-7524028 | MS.gene68625:CDS |
| TAAGCGGTGGTGAGTGGTAG+TGG | 0.408658 | 8.1:+7526953 | None:intergenic |
| AGATGATAGTGGTTTAATTC+AGG | 0.409345 | 8.1:-7523986 | MS.gene68625:CDS |
| CATATCTTTATGTGGATACA+TGG | 0.412806 | 8.1:-7525271 | MS.gene68625:CDS |
| CGAGATGGTTCGTAATTTAG+AGG | 0.415458 | 8.1:-7524058 | MS.gene68625:CDS |
| TTGAGAGAGGTGTTGGAAGT+AGG | 0.431304 | 8.1:-7525644 | MS.gene68625:CDS |
| GAAAGAGGAGAGCGACCATC+AGG | 0.433390 | 8.1:+7526702 | None:intergenic |
| CACAATGAAGAAGCTCTTGA+AGG | 0.442293 | 8.1:-7525108 | MS.gene68625:CDS |
| ATGCATTATCTCCAGACTTA+GGG | 0.442953 | 8.1:+7525030 | None:intergenic |
| ATGGTGGCGCGTGGGGTAAT+CGG | 0.443215 | 8.1:+7526992 | None:intergenic |
| TCCCATACTTGCGGAATTAG+TGG | 0.444671 | 8.1:-7525171 | MS.gene68625:CDS |
| ATGATCTGCTGCTGATACCT+TGG | 0.450610 | 8.1:+7525401 | None:intergenic |
| CATGGCAATGGATAAAGCTT+TGG | 0.451814 | 8.1:+7526680 | None:intergenic |
| AAGAAAACACTAACCTCCTC+TGG | 0.456445 | 8.1:+7524750 | None:intergenic |
| TCCTTATTCATATCTTTATG+TGG | 0.459286 | 8.1:-7525279 | MS.gene68625:CDS |
| ATGTCATGTGCATCTTCTCC+TGG | 0.459375 | 8.1:+7524380 | None:intergenic |
| CTTGACATGATGAGGCATCT+TGG | 0.461356 | 8.1:-7525431 | MS.gene68625:CDS |
| GCGTGTGCTGTAGAAGTTCC+CGG | 0.463247 | 8.1:-7526867 | MS.gene68625:CDS |
| TCTTATCTGTATTTCCATCA+AGG | 0.463566 | 8.1:+7524845 | None:intergenic |
| TTCTCGACAAGAACGGAGAT+GGG | 0.464209 | 8.1:-7524451 | MS.gene68625:CDS |
| CATGAAGTTCGAAGTCAGAT+AGG | 0.464988 | 8.1:-7525608 | MS.gene68625:CDS |
| TGGATACAAAAGTTTGCATA+TGG | 0.465288 | 8.1:-7524901 | MS.gene68625:CDS |
| GAGCGACCATCAGGAGTAAG+AGG | 0.466122 | 8.1:+7526711 | None:intergenic |
| GGAACTTACAGAGGTGATAG+AGG | 0.467883 | 8.1:-7524414 | MS.gene68625:CDS |
| CTTCATATGGCAGATGATAG+TGG | 0.471188 | 8.1:-7523997 | MS.gene68625:CDS |
| ATTATATTGCCAGGCCAAAA+GGG | 0.474542 | 8.1:-7524926 | MS.gene68625:CDS |
| GTGACGCGGGTGGGTCGAGT+GGG | 0.475192 | 8.1:+7526915 | None:intergenic |
| TGCTCCTCTTGCTCATGCTG+TGG | 0.479821 | 8.1:-7525354 | MS.gene68625:CDS |
| ATAATAAGGAGTTTGGCAAC+AGG | 0.480517 | 8.1:-7523960 | MS.gene68625:CDS |
| GTGTTATCCACAAGTTCCTC+TGG | 0.484331 | 8.1:-7526783 | MS.gene68625:CDS |
| AGCTCTCCTCTTACTCCTGA+TGG | 0.487226 | 8.1:-7526717 | MS.gene68625:CDS |
| GGAGATAATGCATTGGAAGC+TGG | 0.491096 | 8.1:-7525020 | MS.gene68625:CDS |
| CTTCTCGACAAGAACGGAGA+TGG | 0.492481 | 8.1:-7524452 | MS.gene68625:CDS |
| GGTGACGCGGGTGGGTCGAG+TGG | 0.492820 | 8.1:+7526914 | None:intergenic |
| ATTGGATGAGAAACTTCATA+TGG | 0.494227 | 8.1:-7524010 | MS.gene68625:CDS |
| GTGGTGTTGAACCCTAAGTC+TGG | 0.496487 | 8.1:-7525041 | MS.gene68625:CDS |
| TGTGGAAAGAAATCCCTTCT+CGG | 0.498703 | 8.1:-7524956 | MS.gene68625:CDS |
| CAGTGGATGTAAGTGAAATT+GGG | 0.501702 | 8.1:-7524878 | MS.gene68625:CDS |
| TGGTTTGTTTGAGAAGAGAA+TGG | 0.502046 | 8.1:+7526973 | None:intergenic |
| GATGCAGAAGTTATATCTGC+TGG | 0.508548 | 8.1:-7525671 | MS.gene68625:CDS |
| TATCACCATCTTTCCTCCAC+CGG | 0.511134 | 8.1:+7526848 | None:intergenic |
| ACTCGACCCACCCGCGTCAC+CGG | 0.513152 | 8.1:-7526912 | MS.gene68625:CDS |
| TGAGAGTAAGCGGTGGTGAG+TGG | 0.513797 | 8.1:+7526947 | None:intergenic |
| GGATACATGGTTGAGAAGTC+AGG | 0.514914 | 8.1:-7525258 | MS.gene68625:CDS |
| ATAGAGGAGCTTGGTGCACC+AGG | 0.521684 | 8.1:-7524398 | MS.gene68625:CDS |
| ACGCTCTCGGAGTGGACCAC+CGG | 0.522401 | 8.1:+7526886 | None:intergenic |
| CTTATCTGTATTTCCATCAA+GGG | 0.524648 | 8.1:+7524846 | None:intergenic |
| CCGGAGACCGGTGACGCGGG+TGG | 0.524804 | 8.1:+7526905 | None:intergenic |
| ATCCCTTTATGATTTGCACT+TGG | 0.525949 | 8.1:+7524506 | None:intergenic |
| GCTCCTCTTGCTCATGCTGT+GGG | 0.528069 | 8.1:-7525353 | MS.gene68625:CDS |
| CAAAAGTTTGCATATGGCAG+TGG | 0.532210 | 8.1:-7524895 | MS.gene68625:CDS |
| CCACCCGCGTCACCGGTCTC+CGG | 0.535267 | 8.1:-7526905 | MS.gene68625:CDS |
| AGTTCCCGGTGGAGGAAAGA+TGG | 0.535806 | 8.1:-7526853 | MS.gene68625:CDS |
| ATTGCCAGGCCAAAAGGGAA+TGG | 0.535893 | 8.1:-7524921 | MS.gene68625:CDS |
| ATGGATAGGTTAGCTGTTGG+TGG | 0.537695 | 8.1:-7524813 | MS.gene68625:CDS |
| TCTCATTCATTATACAAGGC+TGG | 0.539860 | 8.1:-7524783 | MS.gene68625:CDS |
| AAGAAGACCAGAGGAACTTG+TGG | 0.542935 | 8.1:+7526776 | None:intergenic |
| CTTCTTGACTCGAACAGTGA+TGG | 0.544084 | 8.1:-7524350 | MS.gene68625:CDS |
| TTTCGCCTTCTCGACAAGAA+CGG | 0.544865 | 8.1:-7524458 | MS.gene68625:CDS |
| CATCTCCGTTCTTGTCGAGA+AGG | 0.545112 | 8.1:+7524453 | None:intergenic |
| GGCATCTTGGTCACCTTCCA+AGG | 0.547221 | 8.1:-7525418 | MS.gene68625:CDS |
| ATGGATAAAGCTTTGGAAAG+AGG | 0.547465 | 8.1:+7526687 | None:intergenic |
| TAGGTTAGCTGTTGGTGGAA+TGG | 0.547704 | 8.1:-7524808 | MS.gene68625:CDS |
| ACTTCTACAGCACACGCTCT+CGG | 0.548640 | 8.1:+7526873 | None:intergenic |
| CGGAGTGGACCACCGGAGAC+CGG | 0.548762 | 8.1:+7526893 | None:intergenic |
| GGACTAAAGATTATATTGCC+AGG | 0.550792 | 8.1:-7524935 | MS.gene68625:CDS |
| CTGAAATTCATCAGAGCTGA+GGG | 0.550894 | 8.1:+7524325 | None:intergenic |
| GGAAGAAGAGTGAGAGTAAG+CGG | 0.551427 | 8.1:+7526937 | None:intergenic |
| TCCACTAATTCCGCAAGTAT+GGG | 0.553251 | 8.1:+7525170 | None:intergenic |
| GCTGTAGAAGTTCCCGGTGG+AGG | 0.555769 | 8.1:-7526861 | MS.gene68625:CDS |
| TGACGCGGGTGGGTCGAGTG+GGG | 0.558230 | 8.1:+7526916 | None:intergenic |
| ATCAGCGAGAAGCATGGCAA+TGG | 0.559213 | 8.1:+7526668 | None:intergenic |
| ATCAAATCATCCAATCTATG+TGG | 0.562146 | 8.1:-7524974 | MS.gene68625:CDS |
| GAAGATGTAAATGATGTGCT+TGG | 0.567130 | 8.1:-7525071 | MS.gene68625:CDS |
| CTTTGAAGCTTGACATGATG+AGG | 0.569527 | 8.1:-7525439 | MS.gene68625:CDS |
| AGAGCTTTGAAGAACAGGAA+TGG | 0.570567 | 8.1:+7526734 | None:intergenic |
| TGGAATATTGAGAGAGGTGT+TGG | 0.571119 | 8.1:-7525651 | MS.gene68625:CDS |
| TAAGAACTACTGAAATGGAT+AGG | 0.574391 | 8.1:-7524827 | MS.gene68625:CDS |
| TATAATCTTTAGTCCGAGAA+GGG | 0.574454 | 8.1:+7524943 | None:intergenic |
| GGCATCTCATTCATTATACA+AGG | 0.575422 | 8.1:-7524787 | MS.gene68625:CDS |
| GAGAAGAGAATGGTGGCGCG+TGG | 0.575660 | 8.1:+7526983 | None:intergenic |
| TTCAGCTGCAGCCAGCATGA+TGG | 0.579396 | 8.1:+7524556 | None:intergenic |
| AGAAGAGAATGGTGGCGCGT+GGG | 0.580259 | 8.1:+7526984 | None:intergenic |
| ATCACCATCTTTCCTCCACC+GGG | 0.581759 | 8.1:+7526849 | None:intergenic |
| ACCACCGGAGACCGGTGACG+CGG | 0.582141 | 8.1:+7526901 | None:intergenic |
| ATGAAGAAGCTCTTGAAGGA+TGG | 0.584555 | 8.1:-7525104 | MS.gene68625:CDS |
| ATATAATCTTTAGTCCGAGA+AGG | 0.585270 | 8.1:+7524942 | None:intergenic |
| AGAAGAGTGAGAGTAAGCGG+TGG | 0.586254 | 8.1:+7526940 | None:intergenic |
| TGGTTGAGAAGTCAGGAGAC+AGG | 0.587107 | 8.1:-7525251 | MS.gene68625:CDS |
| ATTCCCACAGCATGAGCAAG+AGG | 0.587161 | 8.1:+7525350 | None:intergenic |
| CGGAGACCGGTGACGCGGGT+GGG | 0.591943 | 8.1:+7526906 | None:intergenic |
| TAAGTCTGGAGATAATGCAT+TGG | 0.596696 | 8.1:-7525027 | MS.gene68625:CDS |
| GCGTTTAAAGACCATCATGC+TGG | 0.599824 | 8.1:-7524567 | MS.gene68625:CDS |
| CCACCGGAGACCGGTGACGC+GGG | 0.602844 | 8.1:+7526902 | None:intergenic |
| AGAAGCTCTTGAAGGATGGT+CGG | 0.606805 | 8.1:-7525100 | MS.gene68625:CDS |
| TGGAGAGAGAGCGTGCTACA+GGG | 0.607107 | 8.1:-7525000 | MS.gene68625:CDS |
| GAAGAGAATGGTGGCGCGTG+GGG | 0.611821 | 8.1:+7526985 | None:intergenic |
| TACAGCACACGCTCTCGGAG+TGG | 0.612388 | 8.1:+7526878 | None:intergenic |
| ACAGAGGTGATAGAGGAGCT+TGG | 0.612835 | 8.1:-7524407 | MS.gene68625:CDS |
| AAAATCTGATCCCATACTTG+CGG | 0.616260 | 8.1:-7525180 | MS.gene68625:CDS |
| CCCGCGTCACCGGTCTCCGG+TGG | 0.617971 | 8.1:-7526902 | MS.gene68625:CDS |
| TCTGCTGCTGATACCTTGGA+AGG | 0.625070 | 8.1:+7525405 | None:intergenic |
| CTGAAGATCAGCGAGAAGCA+TGG | 0.633168 | 8.1:+7526662 | None:intergenic |
| TGATTTGACTGAGAGGATGA+AGG | 0.637086 | 8.1:-7526805 | MS.gene68625:CDS |
| CTTTCAATGATTTGACTGAG+AGG | 0.637305 | 8.1:-7526812 | MS.gene68625:CDS |
| TCTGAAATTCATCAGAGCTG+AGG | 0.641418 | 8.1:+7524324 | None:intergenic |
| AGATGGGAAGATAAGCATTG+AGG | 0.649781 | 8.1:-7524435 | MS.gene68625:CDS |
| ATCTGCTGGAATATTGAGAG+AGG | 0.655258 | 8.1:-7525657 | MS.gene68625:CDS |
| GGCTGGTCTTACTAATCCAG+AGG | 0.657487 | 8.1:-7524766 | MS.gene68625:CDS |
| AAGATGGTGATAGAGCTTGT+CGG | 0.658286 | 8.1:-7526837 | MS.gene68625:CDS |
| TGATGTGCTTGGACTGCGAG+TGG | 0.660485 | 8.1:-7525060 | MS.gene68625:CDS |
| TGGTCTTACTAATCCAGAGG+AGG | 0.668643 | 8.1:-7524763 | MS.gene68625:intron |
| GCGTGGGGTAATCGGAAGCG+TGG | 0.673355 | 8.1:+7527000 | None:intergenic |
| TGATTTGAAAAGAAGACCAG+AGG | 0.678594 | 8.1:+7526767 | None:intergenic |
| TGGATGTAAGTGAAATTGGG+AGG | 0.681330 | 8.1:-7524875 | MS.gene68625:CDS |
| TTTGTTTGAGAAGAGAATGG+TGG | 0.686445 | 8.1:+7526976 | None:intergenic |
| AAGCATTGAGGAACTTACAG+AGG | 0.688318 | 8.1:-7524423 | MS.gene68625:CDS |
| GAAATGGATAGGTTAGCTGT+TGG | 0.706251 | 8.1:-7524816 | MS.gene68625:CDS |
| TTGAGAAGTCAGGAGACAGG+TGG | 0.721078 | 8.1:-7525248 | MS.gene68625:CDS |
| TGTGCTGTAGAAGTTCCCGG+TGG | 0.767826 | 8.1:-7526864 | MS.gene68625:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATGTTAGATAATAGATA+TGG | - | chr8.1:7524857-7524876 | MS.gene68625:CDS | 15.0% |
| !! | GTATCGTTAAAAAATTTAAT+TGG | + | chr8.1:7524426-7524445 | None:intergenic | 15.0% |
| !! | TACTATAAAGAAACAATAAA+CGG | + | chr8.1:7525258-7525277 | None:intergenic | 15.0% |
| !! | TTTAATTCAGGTATATAATA+AGG | - | chr8.1:7526991-7527010 | MS.gene68625:CDS | 15.0% |
| !!! | GCAATTGATTTTAAATAATT+TGG | + | chr8.1:7525043-7525062 | None:intergenic | 15.0% |
| !!! | TAAAAAAAAGATTCCTTTTT+AGG | - | chr8.1:7524542-7524561 | MS.gene68625:CDS | 15.0% |
| !!! | TAAGAAAATATTCCTTTTTT+AGG | - | chr8.1:7524504-7524523 | MS.gene68625:CDS | 15.0% |
| !!! | TCTATTTGTTTTATTAGTTA+AGG | + | chr8.1:7524814-7524833 | None:intergenic | 15.0% |
| !! | AAGTCAATAAATAGTAATCA+TGG | + | chr8.1:7524448-7524467 | None:intergenic | 20.0% |
| !! | AATATTGTGGTATACATATA+AGG | - | chr8.1:7524668-7524687 | MS.gene68625:intron | 20.0% |
| !! | AGTTGTACATAATTTCTTAA+TGG | - | chr8.1:7526765-7526784 | MS.gene68625:CDS | 20.0% |
| !! | ATGAAAATGAATGAAAGTAA+TGG | + | chr8.1:7524336-7524355 | None:intergenic | 20.0% |
| !! | ATTATTCAATGAACCTAAAA+AGG | + | chr8.1:7524558-7524577 | None:intergenic | 20.0% |
| !! | TGATGAATACAAGAAAATAT+TGG | - | chr8.1:7526937-7526956 | MS.gene68625:CDS | 20.0% |
| !!! | ATAATTGATTTTGACATGTT+TGG | - | chr8.1:7524941-7524960 | MS.gene68625:CDS | 20.0% |
| !!! | TATTTTCTTATATTTCAGAC+CGG | + | chr8.1:7524494-7524513 | None:intergenic | 20.0% |
| !!! | TATTTTCTTATATTTGAGAC+CGG | - | chr8.1:7524641-7524660 | MS.gene68625:intron | 20.0% |
| !!! | TGTTTTATTTTTTGATACTC+AGG | - | chr8.1:7526371-7526390 | MS.gene68625:intron | 20.0% |
| ! | AACAAATAGATAAGCTTAGA+AGG | - | chr8.1:7524824-7524843 | MS.gene68625:CDS | 25.0% |
| ! | CAAGTTAGAATCAATTATAG+AGG | + | chr8.1:7524992-7525011 | None:intergenic | 25.0% |
| ! | TAACTACATATCACTTGAAT+TGG | - | chr8.1:7525638-7525657 | MS.gene68625:CDS | 25.0% |
| ! | TCCACATAAAGATATGAATA+AGG | + | chr8.1:7525690-7525709 | None:intergenic | 25.0% |
| ! | TCCTTATTCATATCTTTATG+TGG | - | chr8.1:7525686-7525705 | MS.gene68625:intron | 25.0% |
| !! | AATTTCAGTAAGAGTTTGTT+TGG | + | chr8.1:7525200-7525219 | None:intergenic | 25.0% |
| AACAGCTACTATACTCTTAA+TGG | + | chr8.1:7525098-7525117 | None:intergenic | 30.0% | |
| ACAGATAAGAACTACTGAAA+TGG | - | chr8.1:7526133-7526152 | MS.gene68625:intron | 30.0% | |
| ATAATTTGGTTATGTGTCTC+TGG | + | chr8.1:7525029-7525048 | None:intergenic | 30.0% | |
| ATAGTAAATGTGATTGCAGA+TGG | - | chr8.1:7525272-7525291 | MS.gene68625:CDS | 30.0% | |
| ATATAATCTTTAGTCCGAGA+AGG | + | chr8.1:7526026-7526045 | None:intergenic | 30.0% | |
| ATCAAATCATCCAATCTATG+TGG | - | chr8.1:7525991-7526010 | MS.gene68625:intron | 30.0% | |
| ATTGGATGAGAAACTTCATA+TGG | - | chr8.1:7526955-7526974 | MS.gene68625:CDS | 30.0% | |
| ATTTCAGATGTTCCAAAAAC+AGG | - | chr8.1:7526656-7526675 | MS.gene68625:intron | 30.0% | |
| CAATGAAATTATGACACTCA+AGG | + | chr8.1:7525235-7525254 | None:intergenic | 30.0% | |
| CAGGTATATAATAAGGAGTT+TGG | - | chr8.1:7526998-7527017 | MS.gene68625:CDS | 30.0% | |
| CATATCTTTATGTGGATACA+TGG | - | chr8.1:7525694-7525713 | MS.gene68625:intron | 30.0% | |
| CATTGAGTAGTTAATGTATG+TGG | + | chr8.1:7524606-7524625 | None:intergenic | 30.0% | |
| CTTATCTGTATTTCCATCAA+GGG | + | chr8.1:7526122-7526141 | None:intergenic | 30.0% | |
| CTTGCAAAGATGAATGAATA+CGG | + | chr8.1:7526250-7526269 | None:intergenic | 30.0% | |
| GACATGAAAAAGAAGGAAAT+TGG | - | chr8.1:7526341-7526360 | MS.gene68625:intron | 30.0% | |
| TAAGAACTACTGAAATGGAT+AGG | - | chr8.1:7526138-7526157 | MS.gene68625:intron | 30.0% | |
| TAGCTCAAGTATATATGCTT+TGG | + | chr8.1:7526807-7526826 | None:intergenic | 30.0% | |
| TATAATCTTTAGTCCGAGAA+GGG | + | chr8.1:7526025-7526044 | None:intergenic | 30.0% | |
| TATGTAACTCTAGTGGTATT+TGG | - | chr8.1:7526874-7526893 | MS.gene68625:CDS | 30.0% | |
| TCTTATCTGTATTTCCATCA+AGG | + | chr8.1:7526123-7526142 | None:intergenic | 30.0% | |
| TGGATACAAAAGTTTGCATA+TGG | - | chr8.1:7526064-7526083 | MS.gene68625:intron | 30.0% | |
| TTCCAAGTGCAAATCATAAA+GGG | - | chr8.1:7526457-7526476 | MS.gene68625:intron | 30.0% | |
| TTGAGACTTGAACCTAAAAA+AGG | + | chr8.1:7524519-7524538 | None:intergenic | 30.0% | |
| TTGCACTTGGAAAATCTTTA+AGG | + | chr8.1:7526449-7526468 | None:intergenic | 30.0% | |
| TTGCAGTTAACAAAACACAT+AGG | - | chr8.1:7525059-7525078 | MS.gene68625:CDS | 30.0% | |
| TTTCCAAGTGCAAATCATAA+AGG | - | chr8.1:7526456-7526475 | MS.gene68625:intron | 30.0% | |
| ! | TTTTTCATGTCTAAGGAGTT+AGG | + | chr8.1:7526332-7526351 | None:intergenic | 30.0% |
| !! | AATTTGACATTTTGAGAGCA+AGG | - | chr8.1:7524709-7524728 | MS.gene68625:intron | 30.0% |
| !! | AGATGATAGTGGTTTAATTC+AGG | - | chr8.1:7526979-7526998 | MS.gene68625:CDS | 30.0% |
| !! | TGACATTAGAGCTTTGATTT+TGG | - | chr8.1:7525497-7525516 | MS.gene68625:CDS | 30.0% |
| !! | TTCCTTCTTTTTCATGTCTA+AGG | + | chr8.1:7526339-7526358 | None:intergenic | 30.0% |
| AAAATCTGATCCCATACTTG+CGG | - | chr8.1:7525785-7525804 | MS.gene68625:intron | 35.0% | |
| AATGCATTATCTCCAGACTT+AGG | + | chr8.1:7525939-7525958 | None:intergenic | 35.0% | |
| AGCACATCATTTACATCTTC+TGG | + | chr8.1:7525894-7525913 | None:intergenic | 35.0% | |
| AGGTGATTTGATGTCTTATC+AGG | - | chr8.1:7526676-7526695 | MS.gene68625:CDS | 35.0% | |
| ATAATAAGGAGTTTGGCAAC+AGG | - | chr8.1:7527005-7527024 | MS.gene68625:CDS | 35.0% | |
| ATGCATTATCTCCAGACTTA+GGG | + | chr8.1:7525938-7525957 | None:intergenic | 35.0% | |
| ATTATATTGCCAGGCCAAAA+GGG | - | chr8.1:7526039-7526058 | MS.gene68625:intron | 35.0% | |
| CAGTGGATGTAAGTGAAATT+GGG | - | chr8.1:7526087-7526106 | MS.gene68625:intron | 35.0% | |
| CTCCTTAGACATGAAAAAGA+AGG | - | chr8.1:7526334-7526353 | MS.gene68625:intron | 35.0% | |
| CTTTCAATGATTTGACTGAG+AGG | - | chr8.1:7524153-7524172 | MS.gene68625:intron | 35.0% | |
| GAAGATGTAAATGATGTGCT+TGG | - | chr8.1:7525894-7525913 | MS.gene68625:intron | 35.0% | |
| GGACTAAAGATTATATTGCC+AGG | - | chr8.1:7526030-7526049 | MS.gene68625:intron | 35.0% | |
| GGATTTCTTTCCACATAGAT+TGG | + | chr8.1:7526004-7526023 | None:intergenic | 35.0% | |
| GGCATCTCATTCATTATACA+AGG | - | chr8.1:7526178-7526197 | MS.gene68625:intron | 35.0% | |
| GTGGATGATATCTCAGTTAA+AGG | - | chr8.1:7525813-7525832 | MS.gene68625:intron | 35.0% | |
| TAAGTCTGGAGATAATGCAT+TGG | - | chr8.1:7525938-7525957 | MS.gene68625:intron | 35.0% | |
| TCTCATTCATTATACAAGGC+TGG | - | chr8.1:7526182-7526201 | MS.gene68625:intron | 35.0% | |
| TGAGTTGTATGTAACTCTAG+TGG | - | chr8.1:7526867-7526886 | MS.gene68625:CDS | 35.0% | |
| TGATTTGAAAAGAAGACCAG+AGG | + | chr8.1:7524201-7524220 | None:intergenic | 35.0% | |
| TTACATACAACTCATGAGAC+AGG | + | chr8.1:7526861-7526880 | None:intergenic | 35.0% | |
| TTCTTATATTTCAGACCGGA+GGG | + | chr8.1:7524490-7524509 | None:intergenic | 35.0% | |
| TTTCACCAAACACACATGTA+AGG | + | chr8.1:7524908-7524927 | None:intergenic | 35.0% | |
| TTTCTTATATTTCAGACCGG+AGG | + | chr8.1:7524491-7524510 | None:intergenic | 35.0% | |
| TTTGTTTGAGAAGAGAATGG+TGG | + | chr8.1:7523992-7524011 | None:intergenic | 35.0% | |
| ! | ATCCCTTTATGATTTGCACT+TGG | + | chr8.1:7526462-7526481 | None:intergenic | 35.0% |
| ! | CTTTTGTATCCATTCCCTTT+TGG | + | chr8.1:7526056-7526075 | None:intergenic | 35.0% |
| ! | GACATCAAATCACCTGTTTT+TGG | + | chr8.1:7526671-7526690 | None:intergenic | 35.0% |
| ! | TGCTTTGGTAATCAGATAGT+TGG | + | chr8.1:7526792-7526811 | None:intergenic | 35.0% |
| ! | TTCTTATATTTGAGACCGGA+GGG | - | chr8.1:7524645-7524664 | MS.gene68625:intron | 35.0% |
| ! | TTTCTTATATTTGAGACCGG+AGG | - | chr8.1:7524644-7524663 | MS.gene68625:intron | 35.0% |
| !! | AGTGTTGTTTAGTCTCAGTT+TGG | - | chr8.1:7524737-7524756 | MS.gene68625:intron | 35.0% |
| !! | ATGGATAAAGCTTTGGAAAG+AGG | + | chr8.1:7524281-7524300 | None:intergenic | 35.0% |
| !! | TAAGCTTAGAAGGTTGATGA+TGG | - | chr8.1:7524834-7524853 | MS.gene68625:CDS | 35.0% |
| !! | TAGAGCTTTGATTTTGGACT+TGG | - | chr8.1:7525503-7525522 | MS.gene68625:CDS | 35.0% |
| !! | TGGTTTGTTTGAGAAGAGAA+TGG | + | chr8.1:7523995-7524014 | None:intergenic | 35.0% |
| !! | TGTGTGTTTGGTGAAACTTT+TGG | - | chr8.1:7524912-7524931 | MS.gene68625:CDS | 35.0% |
| !!! | CTAGTGGTATTTGGTTTTGT+AGG | - | chr8.1:7526883-7526902 | MS.gene68625:CDS | 35.0% |
| AAGAAAACACTAACCTCCTC+TGG | + | chr8.1:7526218-7526237 | None:intergenic | 40.0% | |
| AAGATGGTGATAGAGCTTGT+CGG | - | chr8.1:7524128-7524147 | MS.gene68625:intron | 40.0% | |
| ATCCACTAATTCCGCAAGTA+TGG | + | chr8.1:7525799-7525818 | None:intergenic | 40.0% | |
| ATCTGCTGGAATATTGAGAG+AGG | - | chr8.1:7525308-7525327 | MS.gene68625:CDS | 40.0% | |
| ATGAAGAAGCTCTTGAAGGA+TGG | - | chr8.1:7525861-7525880 | MS.gene68625:intron | 40.0% | |
| CAAAAGTTTGCATATGGCAG+TGG | - | chr8.1:7526070-7526089 | MS.gene68625:intron | 40.0% | |
| CACAATGAAGAAGCTCTTGA+AGG | - | chr8.1:7525857-7525876 | MS.gene68625:intron | 40.0% | |
| CATGAAGTTCGAAGTCAGAT+AGG | - | chr8.1:7525357-7525376 | MS.gene68625:CDS | 40.0% | |
| CATGGCAATGGATAAAGCTT+TGG | + | chr8.1:7524288-7524307 | None:intergenic | 40.0% | |
| CGAGATGGTTCGTAATTTAG+AGG | - | chr8.1:7526907-7526926 | MS.gene68625:CDS | 40.0% | |
| CTGAAATTCATCAGAGCTGA+GGG | + | chr8.1:7526643-7526662 | None:intergenic | 40.0% | |
| CTTCATATGGCAGATGATAG+TGG | - | chr8.1:7526968-7526987 | MS.gene68625:CDS | 40.0% | |
| GATGCAGAAGTTATATCTGC+TGG | - | chr8.1:7525294-7525313 | MS.gene68625:CDS | 40.0% | |
| GATTATATTGCCAGGCCAAA+AGG | - | chr8.1:7526038-7526057 | MS.gene68625:intron | 40.0% | |
| GCAGTGGATGTAAGTGAAAT+TGG | - | chr8.1:7526086-7526105 | MS.gene68625:intron | 40.0% | |
| GTATACCACAATATTCCCTC+CGG | + | chr8.1:7524663-7524682 | None:intergenic | 40.0% | |
| GTTGACCTTACATGTGTGTT+TGG | - | chr8.1:7524900-7524919 | MS.gene68625:CDS | 40.0% | |
| TCCACTAATTCCGCAAGTAT+GGG | + | chr8.1:7525798-7525817 | None:intergenic | 40.0% | |
| TCTAAGGAGTTAGGTCTAGA+TGG | + | chr8.1:7526323-7526342 | None:intergenic | 40.0% | |
| TGATTTGACTGAGAGGATGA+AGG | - | chr8.1:7524160-7524179 | MS.gene68625:intron | 40.0% | |
| TGGATGTAAGTGAAATTGGG+AGG | - | chr8.1:7526090-7526109 | MS.gene68625:intron | 40.0% | |
| TGTGGAAAGAAATCCCTTCT+CGG | - | chr8.1:7526009-7526028 | MS.gene68625:intron | 40.0% | |
| ! | AGATGGGAAGATAAGCATTG+AGG | - | chr8.1:7526530-7526549 | MS.gene68625:intron | 40.0% |
| ! | GAAATGGATAGGTTAGCTGT+TGG | - | chr8.1:7526149-7526168 | MS.gene68625:intron | 40.0% |
| ! | TCTGAAATTCATCAGAGCTG+AGG | + | chr8.1:7526644-7526663 | None:intergenic | 40.0% |
| ! | TGCATCTAGAGTAGACATTC+TGG | - | chr8.1:7525428-7525447 | MS.gene68625:CDS | 40.0% |
| ! | TGGAATATTGAGAGAGGTGT+TGG | - | chr8.1:7525314-7525333 | MS.gene68625:CDS | 40.0% |
| !! | AAGCATTGAGGAACTTACAG+AGG | - | chr8.1:7526542-7526561 | MS.gene68625:intron | 40.0% |
| !! | AGAGCTTTGAAGAACAGGAA+TGG | + | chr8.1:7524234-7524253 | None:intergenic | 40.0% |
| !! | CTTTGAAGCTTGACATGATG+AGG | - | chr8.1:7525526-7525545 | MS.gene68625:CDS | 40.0% |
| !! | GTGTTTGGTGAAACTTTTGG+AGG | - | chr8.1:7524915-7524934 | MS.gene68625:CDS | 40.0% |
| !! | TGACATTTTGAGAGCAAGGA+AGG | - | chr8.1:7524713-7524732 | MS.gene68625:intron | 40.0% |
| !!! | TTTGGTTTTGTAGGTCGAGA+TGG | - | chr8.1:7526892-7526911 | MS.gene68625:CDS | 40.0% |
| AAGAAGACCAGAGGAACTTG+TGG | + | chr8.1:7524192-7524211 | None:intergenic | 45.0% | |
| AGAAGCTCTTGAAGGATGGT+CGG | - | chr8.1:7525865-7525884 | MS.gene68625:intron | 45.0% | |
| AGGTTCTGCTACTGCTCATT+TGG | - | chr8.1:7525377-7525396 | MS.gene68625:CDS | 45.0% | |
| ATGATCTGCTGCTGATACCT+TGG | + | chr8.1:7525567-7525586 | None:intergenic | 45.0% | |
| ATGTCATGTGCATCTTCTCC+TGG | + | chr8.1:7526588-7526607 | None:intergenic | 45.0% | |
| GCGTTTAAAGACCATCATGC+TGG | - | chr8.1:7526398-7526417 | MS.gene68625:intron | 45.0% | |
| GGAACTTACAGAGGTGATAG+AGG | - | chr8.1:7526551-7526570 | MS.gene68625:intron | 45.0% | |
| GGAAGAAGAGTGAGAGTAAG+CGG | + | chr8.1:7524031-7524050 | None:intergenic | 45.0% | |
| GGAGATAATGCATTGGAAGC+TGG | - | chr8.1:7525945-7525964 | MS.gene68625:intron | 45.0% | |
| GGATACATGGTTGAGAAGTC+AGG | - | chr8.1:7525707-7525726 | MS.gene68625:intron | 45.0% | |
| GTGTTATCCACAAGTTCCTC+TGG | - | chr8.1:7524182-7524201 | MS.gene68625:intron | 45.0% | |
| TATCACCATCTTTCCTCCAC+CGG | + | chr8.1:7524120-7524139 | None:intergenic | 45.0% | |
| TCCCATACTTGCGGAATTAG+TGG | - | chr8.1:7525794-7525813 | MS.gene68625:intron | 45.0% | |
| TCTTAAACTTCTCCTCCCTC+CGG | - | chr8.1:7524472-7524491 | MS.gene68625:CDS | 45.0% | |
| TTATATTTCAGACCGGAGGG+AGG | + | chr8.1:7524487-7524506 | None:intergenic | 45.0% | |
| TTCTCGACAAGAACGGAGAT+GGG | - | chr8.1:7526514-7526533 | MS.gene68625:intron | 45.0% | |
| TTTCGCCTTCTCGACAAGAA+CGG | - | chr8.1:7526507-7526526 | MS.gene68625:intron | 45.0% | |
| ! | ATGGATAGGTTAGCTGTTGG+TGG | - | chr8.1:7526152-7526171 | MS.gene68625:intron | 45.0% |
| ! | CTTCTTGACTCGAACAGTGA+TGG | - | chr8.1:7526615-7526634 | MS.gene68625:intron | 45.0% |
| ! | CTTGACATGATGAGGCATCT+TGG | - | chr8.1:7525534-7525553 | MS.gene68625:CDS | 45.0% |
| ! | TAGGTTAGCTGTTGGTGGAA+TGG | - | chr8.1:7526157-7526176 | MS.gene68625:intron | 45.0% |
| ! | TGGTCTTACTAATCCAGAGG+AGG | - | chr8.1:7526202-7526221 | MS.gene68625:intron | 45.0% |
| !! | AGAGGAGAGCTTTGAAGAAC+AGG | + | chr8.1:7524239-7524258 | None:intergenic | 45.0% |
| !! | TTGAGAGAGGTGTTGGAAGT+AGG | - | chr8.1:7525321-7525340 | MS.gene68625:CDS | 45.0% |
| ACAGAGGTGATAGAGGAGCT+TGG | - | chr8.1:7526558-7526577 | MS.gene68625:intron | 50.0% | |
| ACTTCTACAGCACACGCTCT+CGG | + | chr8.1:7524095-7524114 | None:intergenic | 50.0% | |
| AGAAGAGTGAGAGTAAGCGG+TGG | + | chr8.1:7524028-7524047 | None:intergenic | 50.0% | |
| AGCTCTCCTCTTACTCCTGA+TGG | - | chr8.1:7524248-7524267 | MS.gene68625:intron | 50.0% | |
| ATCACCATCTTTCCTCCACC+GGG | + | chr8.1:7524119-7524138 | None:intergenic | 50.0% | |
| ATTCCCACAGCATGAGCAAG+AGG | + | chr8.1:7525618-7525637 | None:intergenic | 50.0% | |
| ATTGCCAGGCCAAAAGGGAA+TGG | - | chr8.1:7526044-7526063 | MS.gene68625:intron | 50.0% | |
| CATCTCCGTTCTTGTCGAGA+AGG | + | chr8.1:7526515-7526534 | None:intergenic | 50.0% | |
| CATGCTTCTCGCTGATCTTC+AGG | - | chr8.1:7524304-7524323 | MS.gene68625:intron | 50.0% | |
| CTGAAGATCAGCGAGAAGCA+TGG | + | chr8.1:7524306-7524325 | None:intergenic | 50.0% | |
| CTTCTCGACAAGAACGGAGA+TGG | - | chr8.1:7526513-7526532 | MS.gene68625:intron | 50.0% | |
| TCTGCTGCTGATACCTTGGA+AGG | + | chr8.1:7525563-7525582 | None:intergenic | 50.0% | |
| TGAGACCGGAGGGAATATTG+TGG | - | chr8.1:7524655-7524674 | MS.gene68625:intron | 50.0% | |
| TGGTTGAGAAGTCAGGAGAC+AGG | - | chr8.1:7525714-7525733 | MS.gene68625:intron | 50.0% | |
| TTGAGAAGTCAGGAGACAGG+TGG | - | chr8.1:7525717-7525736 | MS.gene68625:intron | 50.0% | |
| ! | ATCAGCGAGAAGCATGGCAA+TGG | + | chr8.1:7524300-7524319 | None:intergenic | 50.0% |
| ! | GTATCCATTCCCTTTTGGCC+TGG | + | chr8.1:7526051-7526070 | None:intergenic | 50.0% |
| ! | GTGGTGTTGAACCCTAAGTC+TGG | - | chr8.1:7525924-7525943 | MS.gene68625:intron | 50.0% |
| !! | GGCTGGTCTTACTAATCCAG+AGG | - | chr8.1:7526199-7526218 | MS.gene68625:intron | 50.0% |
| AGTTCCCGGTGGAGGAAAGA+TGG | - | chr8.1:7524112-7524131 | MS.gene68625:intron | 55.0% | |
| GAAAGAGGAGAGCGACCATC+AGG | + | chr8.1:7524266-7524285 | None:intergenic | 55.0% | |
| GAGCGACCATCAGGAGTAAG+AGG | + | chr8.1:7524257-7524276 | None:intergenic | 55.0% | |
| GCGTGTGCTGTAGAAGTTCC+CGG | - | chr8.1:7524098-7524117 | MS.gene68625:intron | 55.0% | |
| GCTCCTCTTGCTCATGCTGT+GGG | - | chr8.1:7525612-7525631 | MS.gene68625:CDS | 55.0% | |
| GGCATCTTGGTCACCTTCCA+AGG | - | chr8.1:7525547-7525566 | MS.gene68625:CDS | 55.0% | |
| TAAGCGGTGGTGAGTGGTAG+TGG | + | chr8.1:7524015-7524034 | None:intergenic | 55.0% | |
| TGAGAGTAAGCGGTGGTGAG+TGG | + | chr8.1:7524021-7524040 | None:intergenic | 55.0% | |
| TGATGTGCTTGGACTGCGAG+TGG | - | chr8.1:7525905-7525924 | MS.gene68625:intron | 55.0% | |
| TGCTCCTCTTGCTCATGCTG+TGG | - | chr8.1:7525611-7525630 | MS.gene68625:CDS | 55.0% | |
| TGGGAGGACTAGACCCTTGA+TGG | - | chr8.1:7526106-7526125 | MS.gene68625:intron | 55.0% | |
| TGTGCTGTAGAAGTTCCCGG+TGG | - | chr8.1:7524101-7524120 | MS.gene68625:intron | 55.0% | |
| TTCAGCTGCAGCCAGCATGA+TGG | + | chr8.1:7526412-7526431 | None:intergenic | 55.0% | |
| ! | AGAAGAGAATGGTGGCGCGT+GGG | + | chr8.1:7523984-7524003 | None:intergenic | 55.0% |
| ! | TGGAGAGAGAGCGTGCTACA+GGG | - | chr8.1:7525965-7525984 | MS.gene68625:intron | 55.0% |
| !! | ATAGAGGAGCTTGGTGCACC+AGG | - | chr8.1:7526567-7526586 | MS.gene68625:intron | 55.0% |
| GCTGTAGAAGTTCCCGGTGG+AGG | - | chr8.1:7524104-7524123 | MS.gene68625:intron | 60.0% | |
| TACAGCACACGCTCTCGGAG+TGG | + | chr8.1:7524090-7524109 | None:intergenic | 60.0% | |
| ! | ATGGTGGCGCGTGGGGTAAT+CGG | + | chr8.1:7523976-7523995 | None:intergenic | 60.0% |
| ! | CATGCTGGCTGCAGCTGAAC+TGG | - | chr8.1:7526413-7526432 | MS.gene68625:intron | 60.0% |
| ! | CTGGAGAGAGAGCGTGCTAC+AGG | - | chr8.1:7525964-7525983 | MS.gene68625:intron | 60.0% |
| ! | GAAGAGAATGGTGGCGCGTG+GGG | + | chr8.1:7523983-7524002 | None:intergenic | 60.0% |
| ! | GAGAAGAGAATGGTGGCGCG+TGG | + | chr8.1:7523985-7524004 | None:intergenic | 60.0% |
| ACGCTCTCGGAGTGGACCAC+CGG | + | chr8.1:7524082-7524101 | None:intergenic | 65.0% | |
| GCGTGGGGTAATCGGAAGCG+TGG | + | chr8.1:7523968-7523987 | None:intergenic | 65.0% | |
| ACCACCGGAGACCGGTGACG+CGG | + | chr8.1:7524067-7524086 | None:intergenic | 70.0% | |
| ACTCGACCCACCCGCGTCAC+CGG | - | chr8.1:7524053-7524072 | MS.gene68625:CDS | 70.0% | |
| CGGAGTGGACCACCGGAGAC+CGG | + | chr8.1:7524075-7524094 | None:intergenic | 70.0% | |
| GTGACGCGGGTGGGTCGAGT+GGG | + | chr8.1:7524053-7524072 | None:intergenic | 70.0% | |
| TGACGCGGGTGGGTCGAGTG+GGG | + | chr8.1:7524052-7524071 | None:intergenic | 70.0% | |
| CCACCCGCGTCACCGGTCTC+CGG | - | chr8.1:7524060-7524079 | MS.gene68625:CDS | 75.0% | |
| CCACCGGAGACCGGTGACGC+GGG | + | chr8.1:7524066-7524085 | None:intergenic | 75.0% | |
| CGGAGACCGGTGACGCGGGT+GGG | + | chr8.1:7524062-7524081 | None:intergenic | 75.0% | |
| GGTGACGCGGGTGGGTCGAG+TGG | + | chr8.1:7524054-7524073 | None:intergenic | 75.0% | |
| ! | CCCGCGTCACCGGTCTCCGG+TGG | - | chr8.1:7524063-7524082 | MS.gene68625:CDS | 80.0% |
| ! | CCGGAGACCGGTGACGCGGG+TGG | + | chr8.1:7524063-7524082 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 7523948 | 7527039 | 7523948 | ID=MS.gene68625 |
| chr8.1 | mRNA | 7523948 | 7527039 | 7523948 | ID=MS.gene68625.t1;Parent=MS.gene68625 |
| chr8.1 | exon | 7526662 | 7527039 | 7526662 | ID=MS.gene68625.t1.exon1;Parent=MS.gene68625.t1 |
| chr8.1 | CDS | 7526662 | 7527039 | 7526662 | ID=cds.MS.gene68625.t1;Parent=MS.gene68625.t1 |
| chr8.1 | exon | 7524764 | 7525696 | 7524764 | ID=MS.gene68625.t1.exon2;Parent=MS.gene68625.t1 |
| chr8.1 | CDS | 7524764 | 7525696 | 7524764 | ID=cds.MS.gene68625.t1;Parent=MS.gene68625.t1 |
| chr8.1 | exon | 7524310 | 7524594 | 7524310 | ID=MS.gene68625.t1.exon3;Parent=MS.gene68625.t1 |
| chr8.1 | CDS | 7524310 | 7524594 | 7524310 | ID=cds.MS.gene68625.t1;Parent=MS.gene68625.t1 |
| chr8.1 | exon | 7523948 | 7524082 | 7523948 | ID=MS.gene68625.t1.exon4;Parent=MS.gene68625.t1 |
| chr8.1 | CDS | 7523948 | 7524082 | 7523948 | ID=cds.MS.gene68625.t1;Parent=MS.gene68625.t1 |
| Gene Sequence |
| Protein sequence |
