AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene54155

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54155.t1 MTR_5g072500 95.500 600 18 2 1 600 1 591 0.0 1186
MS.gene54155.t1 MTR_3g465590 68.197 610 162 9 1 600 1 588 0.0 828
MS.gene54155.t1 MTR_1g113960 32.609 276 173 6 324 594 285 552 8.00e-50 181
MS.gene54155.t1 MTR_1g113960 32.609 276 173 6 324 594 285 552 1.73e-49 181
MS.gene54155.t1 MTR_5g023150 27.006 511 306 17 125 592 58 544 2.29e-49 181
MS.gene54155.t1 MTR_3g114900 34.866 261 159 6 339 594 267 521 6.18e-47 173
MS.gene54155.t1 MTR_1g099110 33.591 259 160 6 335 588 259 510 1.10e-46 172
MS.gene54155.t1 MTR_5g023150 31.379 290 176 7 318 592 166 447 1.25e-46 171
MS.gene54155.t1 MTR_1g099110 33.591 259 160 6 335 588 276 527 2.83e-46 172
MS.gene54155.t1 MTR_1g026160 31.179 263 169 5 335 592 139 394 4.40e-45 165
MS.gene54155.t1 MTR_3g034100 32.000 275 171 6 328 592 68 336 1.79e-41 154
MS.gene54155.t1 MTR_8g100085 32.000 275 171 6 328 592 119 387 1.02e-40 153
MS.gene54155.t1 MTR_4g132860 28.428 299 186 9 310 592 48 334 6.22e-37 142
MS.gene54155.t1 MTR_4g105770 28.261 276 178 7 329 592 45 312 1.18e-35 137
MS.gene54155.t1 MTR_2g013900 26.959 319 200 11 286 594 124 419 2.60e-34 136
MS.gene54155.t1 MTR_3g078000 28.049 246 165 5 353 592 72 311 5.01e-34 133
MS.gene54155.t1 MTR_7g072710 28.102 274 180 7 333 592 36 306 7.20e-32 127
MS.gene54155.t1 MTR_4g088755 26.295 251 169 7 353 594 54 297 5.94e-31 124
MS.gene54155.t1 MTR_4g088745 26.295 251 169 7 353 594 59 302 6.32e-31 124
MS.gene54155.t1 MTR_1g026160 28.761 226 149 5 335 555 139 357 1.64e-30 123
MS.gene54155.t1 MTR_1g026160 28.761 226 149 5 335 555 137 355 1.76e-30 123
MS.gene54155.t1 MTR_3g078110 26.136 264 167 5 353 592 75 334 2.61e-30 122
MS.gene54155.t1 MTR_7g072710 31.250 208 133 5 392 592 65 269 3.06e-30 121
MS.gene54155.t1 MTR_4g088750 27.670 206 139 5 392 594 260 458 3.98e-30 124
MS.gene54155.t1 MTR_1g026160 28.829 222 146 5 335 551 137 351 4.52e-30 122
MS.gene54155.t1 MTR_1g026160 28.829 222 146 5 335 551 139 353 4.82e-30 122
MS.gene54155.t1 MTR_1g026160 28.761 226 149 5 335 555 284 502 7.23e-30 124
MS.gene54155.t1 MTR_4g106980 26.515 264 166 6 353 592 104 363 1.12e-29 121
MS.gene54155.t1 MTR_1g103270 25.606 289 182 5 333 592 69 353 1.13e-29 121
MS.gene54155.t1 MTR_1g026160 28.829 222 146 5 335 551 284 498 2.76e-29 122
MS.gene54155.t1 MTR_2g461180 30.070 286 172 13 338 600 1124 1404 1.54e-28 122
MS.gene54155.t1 MTR_5g006560 30.159 189 126 2 406 592 211 395 6.41e-28 117
MS.gene54155.t1 MTR_5g006560 30.811 185 122 2 410 592 181 361 7.12e-28 116
MS.gene54155.t1 MTR_4g116520 29.478 268 167 11 338 588 1089 1351 7.73e-28 120
MS.gene54155.t1 MTR_3g076970 28.000 275 178 9 334 593 18 287 8.01e-28 115
MS.gene54155.t1 MTR_6g033130 30.576 278 163 13 336 592 962 1230 5.62e-27 117
MS.gene54155.t1 MTR_4g122160 26.721 247 169 5 346 585 464 705 7.03e-27 116
MS.gene54155.t1 MTR_6g007603 26.515 264 166 6 353 592 87 346 1.73e-26 112
MS.gene54155.t1 MTR_4g128650 28.231 294 182 11 317 588 784 1070 3.26e-26 114
MS.gene54155.t1 MTR_2g034020 25.984 254 176 5 346 592 470 718 1.06e-24 109
MS.gene54155.t1 MTR_1g090020 28.782 271 165 12 338 588 897 1159 3.70e-24 108
MS.gene54155.t1 MTR_5g066490 26.909 275 172 9 335 592 638 900 4.66e-24 107
MS.gene54155.t1 MTR_1g026160 26.961 204 137 5 335 533 137 333 6.06e-24 103
MS.gene54155.t1 MTR_8g442400 28.674 279 168 11 336 592 1380 1649 1.85e-23 106
MS.gene54155.t1 MTR_5g010730 24.806 258 184 4 342 593 423 676 4.05e-23 104
MS.gene54155.t1 MTR_5g010730 24.806 258 184 4 342 593 478 731 4.87e-23 104
MS.gene54155.t1 MTR_1g081790 24.231 260 184 6 346 598 693 946 1.81e-22 102
MS.gene54155.t1 MTR_1g016300 25.357 280 179 9 331 594 652 917 3.13e-22 102
MS.gene54155.t1 MTR_8g107000 24.275 276 196 7 330 598 717 986 3.81e-22 102
MS.gene54155.t1 MTR_6g079540 23.827 277 196 7 330 598 400 669 1.68e-21 99.4
MS.gene54155.t1 MTR_6g079540 23.827 277 196 7 330 598 648 917 3.22e-21 99.0
MS.gene54155.t1 MTR_3g100090 24.731 279 175 8 337 592 641 907 5.05e-21 98.2
MS.gene54155.t1 MTR_1g061190 24.427 262 181 7 346 595 559 815 8.41e-20 94.4
MS.gene54155.t1 MTR_6g004440 25.000 272 154 6 334 594 18 250 1.14e-19 90.5
MS.gene54155.t1 MTR_1g050690 24.324 259 180 7 346 594 421 673 1.24e-19 93.6
MS.gene54155.t1 MTR_4g082325 25.091 275 182 10 335 592 134 401 4.97e-19 90.1
MS.gene54155.t1 MTR_1g081790 23.629 237 169 5 346 575 693 924 1.16e-18 90.9
MS.gene54155.t1 MTR_2g017825 25.267 281 187 12 331 597 142 413 4.98e-18 87.4
MS.gene54155.t1 MTR_3g104900 22.997 287 189 10 331 592 159 438 5.77e-18 87.4
MS.gene54155.t1 MTR_2g017825 25.000 280 185 12 331 597 142 409 7.20e-17 84.0
MS.gene54155.t1 MTR_4g106980 25.234 214 132 6 353 542 104 313 2.00e-16 81.3
MS.gene54155.t1 MTR_5g019700 23.684 266 175 11 346 593 47 302 6.95e-16 80.5
MS.gene54155.t1 MTR_6g016040 25.940 266 164 10 344 588 118 371 1.85e-15 79.3
MS.gene54155.t1 MTR_1g105290 24.815 270 173 9 346 596 59 317 3.70e-15 79.0
MS.gene54155.t1 MTR_1g105290 24.815 270 173 9 346 596 59 317 3.77e-15 79.3
MS.gene54155.t1 MTR_1g105290 24.815 270 173 9 346 596 59 317 3.82e-15 79.3
MS.gene54155.t1 MTR_7g058810 25.347 288 171 10 348 599 99 378 7.11e-15 77.4
MS.gene54155.t1 MTR_5g059880 23.228 254 176 8 346 589 196 440 1.67e-14 76.6
MS.gene54155.t1 MTR_8g088590 29.050 179 109 8 427 592 263 436 4.00e-14 75.5
MS.gene54155.t1 MTR_2g078740 24.335 263 183 9 336 589 7 262 4.88e-14 75.9
MS.gene54155.t1 MTR_2g078740 24.335 263 183 9 336 589 7 262 5.27e-14 75.9
MS.gene54155.t1 MTR_2g078740 24.335 263 183 9 336 589 7 262 5.45e-14 75.5
MS.gene54155.t1 MTR_4g114240 26.633 199 132 7 344 532 540 734 1.56e-13 74.3
MS.gene54155.t1 MTR_4g114280 27.228 202 126 9 344 532 555 748 1.73e-13 74.3
MS.gene54155.t1 MTR_2g080080 27.404 208 130 8 344 538 483 682 2.21e-13 73.9
MS.gene54155.t1 MTR_3g106320 27.900 319 182 15 310 593 65 370 2.27e-13 72.8
MS.gene54155.t1 MTR_4g094415 24.324 222 158 6 369 587 199 413 3.44e-13 72.8
MS.gene54155.t1 MTR_4g109170 24.719 267 168 9 353 593 823 1082 3.52e-13 73.2
MS.gene54155.t1 MTR_2g022810 27.500 200 127 6 348 534 85 279 3.69e-13 72.0
MS.gene54155.t1 MTR_5g097530 24.627 268 170 10 341 589 22 276 3.85e-13 70.9
MS.gene54155.t1 MTR_4g005730 24.354 271 182 10 335 589 17 280 4.49e-13 72.8
MS.gene54155.t1 MTR_4g005730 24.354 271 182 10 335 589 17 280 5.30e-13 72.4
MS.gene54155.t1 MTR_4g005730 24.354 271 182 10 335 589 17 280 5.32e-13 72.4
MS.gene54155.t1 MTR_6g043510 28.365 208 125 8 344 535 489 688 7.42e-13 72.0
MS.gene54155.t1 MTR_1g082580 28.500 200 128 6 353 543 166 359 1.04e-12 70.9
MS.gene54155.t1 MTR_5g033490 24.917 301 169 11 330 590 300 583 1.28e-12 71.2
MS.gene54155.t1 MTR_4g074875 23.970 267 176 9 346 599 24 276 1.81e-12 71.2
MS.gene54155.t1 MTR_8g027990 24.576 236 153 8 380 592 272 505 1.84e-12 70.9
MS.gene54155.t1 MTR_4g074875 23.970 267 176 9 346 599 24 276 1.93e-12 71.2
MS.gene54155.t1 MTR_6g011570 28.788 198 117 7 358 543 98 283 2.67e-12 69.7
MS.gene54155.t1 MTR_3g107070 26.442 208 132 7 344 538 475 674 2.91e-12 70.1
MS.gene54155.t1 MTR_4g075410 23.596 267 177 9 346 599 24 276 3.11e-12 70.5
MS.gene54155.t1 MTR_4g075410 23.596 267 177 9 346 599 24 276 3.24e-12 70.5
MS.gene54155.t1 MTR_4g063950 25.442 283 162 12 348 592 98 369 3.44e-12 69.3
MS.gene54155.t1 MTR_2g104790 27.200 250 150 11 367 593 152 392 3.99e-12 68.9
MS.gene54155.t1 MTR_2g090710 30.992 242 132 13 318 535 664 894 4.26e-12 69.7
MS.gene54155.t1 MTR_7g009940 26.250 240 148 10 319 535 487 720 7.43e-12 68.9
MS.gene54155.t1 MTR_1g079430 25.843 267 164 10 353 592 86 345 8.75e-12 68.6
MS.gene54155.t1 MTR_1g027820 27.778 216 118 10 343 535 258 458 1.05e-11 68.2
MS.gene54155.t1 MTR_3g115500 25.455 275 168 8 348 592 56 323 1.08e-11 67.0
MS.gene54155.t1 MTR_5g088400 26.316 266 156 9 362 599 105 358 1.32e-11 67.4
MS.gene54155.t1 MTR_7g083500 28.986 207 123 7 348 538 86 284 1.61e-11 67.0
MS.gene54155.t1 MTR_3g115500 25.455 275 168 8 348 592 74 341 1.66e-11 66.6
MS.gene54155.t1 MTR_4g115120 29.299 157 101 4 392 543 174 325 1.70e-11 67.0
MS.gene54155.t1 MTR_6g043790 27.488 211 129 8 344 538 494 696 1.84e-11 67.8
MS.gene54155.t1 MTR_8g469230 25.778 225 136 7 392 592 195 412 1.93e-11 67.0
MS.gene54155.t1 MTR_5g086120 23.529 289 156 12 353 594 322 592 2.04e-11 67.4
MS.gene54155.t1 MTR_3g040800 27.984 243 141 8 378 592 153 389 2.49e-11 66.2
MS.gene54155.t1 MTR_1g033040 27.155 232 143 9 323 535 559 783 2.84e-11 67.0
MS.gene54155.t1 MTR_1g033010 27.751 209 128 8 344 535 573 775 2.88e-11 67.0
MS.gene54155.t1 MTR_7g029020 23.282 262 181 9 341 589 25 279 3.01e-11 65.1
MS.gene54155.t1 MTR_1g028290 26.794 209 129 9 343 535 290 490 3.12e-11 66.6
MS.gene54155.t1 MTR_3g437630 25.000 252 165 9 353 587 819 1063 3.42e-11 67.0
MS.gene54155.t1 MTR_6g445600 28.704 216 116 10 343 535 265 465 3.53e-11 66.6
MS.gene54155.t1 MTR_3g095680 22.490 249 169 9 341 574 32 271 3.88e-11 66.6
MS.gene54155.t1 MTR_3g462840 28.283 198 118 7 358 543 95 280 3.90e-11 65.9
MS.gene54155.t1 MTR_5g086090 22.476 307 178 12 336 594 299 593 3.92e-11 66.2
MS.gene54155.t1 MTR_6g090615 24.567 289 164 14 348 594 577 853 4.15e-11 66.6
MS.gene54155.t1 MTR_1g027970 26.852 216 130 8 344 541 292 497 4.20e-11 66.2
MS.gene54155.t1 MTR_4g044393 22.456 285 181 10 343 595 533 809 4.61e-11 66.2
MS.gene54155.t1 MTR_0283s0050 24.111 253 161 9 341 574 22 262 4.96e-11 63.9
MS.gene54155.t1 MTR_3g095680 22.490 249 169 9 341 574 64 303 5.14e-11 66.2
MS.gene54155.t1 MTR_7g061660 29.474 190 115 7 358 537 104 284 5.72e-11 65.1
MS.gene54155.t1 MTR_3g028650 27.064 218 119 10 343 535 258 460 6.68e-11 65.5
MS.gene54155.t1 MTR_0690s0010 28.436 211 123 9 343 535 239 439 6.92e-11 65.5
MS.gene54155.t1 MTR_2g073250 27.692 195 124 8 353 538 500 686 7.10e-11 65.9
MS.gene54155.t1 MTR_1g012550 27.143 210 127 10 344 538 504 702 7.57e-11 65.9
MS.gene54155.t1 MTR_1g027060 26.977 215 121 11 343 535 207 407 9.39e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54155.t1 AT5G58520 59.903 621 209 10 1 598 1 604 0.0 717
MS.gene54155.t1 AT5G07140 58.541 603 225 8 1 598 1 583 0.0 658
MS.gene54155.t1 AT2G17700 32.852 277 171 6 325 594 269 537 4.95e-51 184
MS.gene54155.t1 AT4G35780 34.066 273 163 8 330 594 280 543 3.35e-49 180
MS.gene54155.t1 AT4G38470 28.407 521 324 19 101 592 39 539 4.92e-49 179
MS.gene54155.t1 AT4G38470 28.407 521 324 19 101 592 39 539 7.97e-49 179
MS.gene54155.t1 AT4G31170 34.146 246 150 5 353 592 146 385 1.23e-39 150
MS.gene54155.t1 AT4G31170 34.146 246 150 5 353 592 146 385 1.23e-39 150
MS.gene54155.t1 AT4G31170 34.146 246 150 5 353 592 146 385 1.23e-39 150
MS.gene54155.t1 AT4G31170 34.146 246 150 5 353 592 146 385 1.23e-39 150
MS.gene54155.t1 AT4G31170 34.146 246 150 5 353 592 146 385 1.23e-39 150
MS.gene54155.t1 AT4G31170 34.146 246 150 5 353 592 146 385 1.23e-39 150
MS.gene54155.t1 AT4G31170 34.146 246 150 5 353 592 146 385 1.23e-39 150
MS.gene54155.t1 AT1G62400 29.252 294 182 8 314 592 58 340 6.48e-38 145
MS.gene54155.t1 AT5G58950 27.374 358 211 13 257 594 137 465 9.10e-37 144
MS.gene54155.t1 AT4G38470 27.766 479 297 19 101 550 39 497 3.07e-36 142
MS.gene54155.t1 AT2G24360 32.520 246 154 5 353 592 145 384 9.33e-35 136
MS.gene54155.t1 AT3G27560 28.000 275 180 8 334 594 18 288 2.12e-31 125
MS.gene54155.t1 AT4G14780 27.083 288 178 6 333 592 52 335 2.43e-30 122
MS.gene54155.t1 AT5G50000 26.136 264 167 5 353 592 97 356 8.94e-30 121
MS.gene54155.t1 AT5G01850 29.078 282 180 9 327 592 2 279 2.76e-29 119
MS.gene54155.t1 AT3G22750 25.260 289 183 5 333 592 65 349 3.04e-29 120
MS.gene54155.t1 AT3G24715 31.636 275 160 12 338 592 833 1099 5.01e-29 123
MS.gene54155.t1 AT3G24715 31.636 275 160 12 338 592 833 1099 5.01e-29 123
MS.gene54155.t1 AT3G24715 31.636 275 160 12 338 592 833 1099 5.01e-29 123
MS.gene54155.t1 AT5G40540 27.698 278 177 9 334 594 18 288 3.42e-28 116
MS.gene54155.t1 AT5G57610 30.112 269 161 10 340 588 779 1040 7.53e-28 119
MS.gene54155.t1 AT3G01490 25.000 264 170 5 353 592 123 382 1.03e-27 116
MS.gene54155.t1 AT5G50180 27.240 279 185 9 334 598 12 286 1.16e-27 114
MS.gene54155.t1 AT3G46930 26.190 252 162 7 353 592 216 455 1.93e-27 116
MS.gene54155.t1 AT3G46930 26.190 252 162 7 353 592 181 420 2.29e-27 116
MS.gene54155.t1 AT3G63260 24.907 269 169 5 353 592 98 362 1.32e-26 112
MS.gene54155.t1 AT5G01850 31.068 206 132 5 394 592 101 303 2.76e-26 110
MS.gene54155.t1 AT2G35050 28.938 273 166 10 336 588 968 1232 3.52e-26 114
MS.gene54155.t1 AT2G35050 28.938 273 166 10 336 588 968 1232 3.52e-26 114
MS.gene54155.t1 AT3G46920 28.470 281 179 11 327 589 790 1066 8.07e-26 113
MS.gene54155.t1 AT3G46920 28.470 281 179 11 327 589 856 1132 8.35e-26 113
MS.gene54155.t1 AT5G40540 29.577 213 133 7 392 594 7 212 2.18e-25 106
MS.gene54155.t1 AT5G49470 26.378 254 175 6 346 592 208 456 3.65e-25 109
MS.gene54155.t1 AT1G67890 27.799 259 168 8 346 594 491 740 5.28e-25 110
MS.gene54155.t1 AT5G49470 26.172 256 177 6 346 594 495 745 9.14e-25 109
MS.gene54155.t1 AT5G49470 26.172 256 177 6 346 594 469 719 1.22e-24 109
MS.gene54155.t1 AT5G49470 26.172 256 177 6 346 594 368 618 1.52e-24 108
MS.gene54155.t1 AT5G66710 27.239 268 174 10 336 588 65 326 7.04e-24 104
MS.gene54155.t1 AT1G08720 24.809 262 184 6 344 598 671 926 1.66e-23 106
MS.gene54155.t1 AT3G06630 25.385 260 182 6 340 592 432 686 2.48e-23 105
MS.gene54155.t1 AT1G04700 27.500 280 170 11 342 595 766 1038 3.39e-23 105
MS.gene54155.t1 AT1G04700 27.500 280 170 11 342 595 766 1038 3.39e-23 105
MS.gene54155.t1 AT5G11850 23.792 269 193 5 331 592 598 861 4.09e-23 104
MS.gene54155.t1 AT1G16270 28.777 278 168 12 336 592 858 1126 5.37e-23 104
MS.gene54155.t1 AT1G16270 28.777 278 168 12 336 592 858 1126 5.37e-23 104
MS.gene54155.t1 AT1G16270 28.777 278 168 12 336 592 858 1126 5.37e-23 104
MS.gene54155.t1 AT1G18160 27.820 266 168 10 342 594 715 969 8.41e-23 103
MS.gene54155.t1 AT4G23050 22.264 265 192 6 342 598 467 725 8.94e-23 103
MS.gene54155.t1 AT4G23050 22.264 265 192 6 342 598 468 726 9.12e-23 103
MS.gene54155.t1 AT3G06620 25.000 260 183 6 340 592 492 746 9.79e-23 103
MS.gene54155.t1 AT5G40540 29.592 196 123 6 409 594 1 191 1.08e-22 98.2
MS.gene54155.t1 AT3G06640 25.000 260 183 6 340 592 444 698 1.12e-22 103
MS.gene54155.t1 AT3G06640 25.000 260 183 6 340 592 444 698 1.17e-22 103
MS.gene54155.t1 AT3G06640 25.000 260 183 6 340 592 444 698 1.17e-22 103
MS.gene54155.t1 AT1G79570 28.727 275 168 11 338 592 961 1227 2.62e-22 102
MS.gene54155.t1 AT1G79570 28.727 275 168 11 338 592 961 1227 2.62e-22 102
MS.gene54155.t1 AT5G03730 24.615 260 182 5 342 592 551 805 3.59e-22 101
MS.gene54155.t1 AT5G03730 24.615 260 182 5 342 592 551 805 3.59e-22 101
MS.gene54155.t1 AT1G73660 25.180 278 194 6 323 592 729 1000 5.43e-22 101
MS.gene54155.t1 AT1G67890 27.801 241 155 8 346 576 363 594 2.23e-21 99.0
MS.gene54155.t1 AT1G67890 27.801 241 155 8 346 576 491 722 2.23e-21 99.4
MS.gene54155.t1 AT1G67890 27.801 241 155 8 346 576 491 722 2.23e-21 99.4
MS.gene54155.t1 AT4G24480 25.091 275 177 8 335 592 661 923 3.05e-21 99.0
MS.gene54155.t1 AT4G24480 25.091 275 177 8 335 592 661 923 3.21e-21 99.0
MS.gene54155.t1 AT1G14000 28.372 215 139 7 387 592 212 420 4.58e-21 96.7
MS.gene54155.t1 AT4G24480 25.714 280 174 10 335 592 661 928 9.38e-21 97.4
MS.gene54155.t1 AT3G06630 25.000 244 171 6 340 576 432 670 1.11e-20 96.7
MS.gene54155.t1 AT4G18950 25.000 276 184 12 331 592 147 413 8.59e-20 92.8
MS.gene54155.t1 AT4G18950 25.000 276 184 12 331 592 147 413 1.00e-19 92.8
MS.gene54155.t1 AT1G08720 24.268 239 169 5 344 575 671 904 2.59e-19 92.8
MS.gene54155.t1 AT3G50720 25.461 271 175 11 336 588 42 303 2.75e-19 90.5
MS.gene54155.t1 AT3G50730 25.455 275 179 10 336 592 30 296 3.52e-19 90.1
MS.gene54155.t1 AT1G18160 26.721 247 157 10 342 575 715 950 1.30e-18 90.9
MS.gene54155.t1 AT1G74360 27.660 282 165 11 344 594 814 1087 2.98e-18 89.7
MS.gene54155.t1 AT5G40540 24.419 258 165 8 334 577 18 259 6.11e-18 85.1
MS.gene54155.t1 AT5G50000 26.577 222 133 6 353 548 97 314 9.79e-18 85.1
MS.gene54155.t1 AT3G46930 25.000 200 127 6 353 541 216 403 9.76e-17 83.6
MS.gene54155.t1 AT3G46930 25.000 200 127 6 353 541 216 403 1.03e-16 83.2
MS.gene54155.t1 AT3G46930 25.000 200 127 6 353 541 120 307 1.23e-16 82.0
MS.gene54155.t1 AT3G46930 25.000 200 127 6 353 541 181 368 1.90e-16 82.0
MS.gene54155.t1 AT3G06030 25.385 260 172 6 346 589 72 325 2.91e-16 82.8
MS.gene54155.t1 AT1G09000 25.670 261 166 7 348 589 75 326 3.86e-16 82.4
MS.gene54155.t1 AT1G09000 25.670 261 166 7 348 589 75 326 4.30e-16 82.4
MS.gene54155.t1 AT1G54960 24.419 258 173 7 348 589 74 325 5.05e-16 82.0
MS.gene54155.t1 AT1G54960 24.419 258 173 7 348 589 74 325 5.05e-16 82.0
MS.gene54155.t1 AT4G08470 25.600 250 172 9 348 589 309 552 6.87e-16 81.3
MS.gene54155.t1 AT2G31800 23.944 284 183 11 331 592 182 454 1.28e-15 80.1
MS.gene54155.t1 AT4G08470 25.200 250 173 9 348 589 227 470 1.50e-15 80.1
MS.gene54155.t1 AT3G59830 25.957 235 151 7 371 592 231 455 2.90e-15 79.0
MS.gene54155.t1 AT3G06630 24.651 215 150 6 340 547 432 641 4.81e-15 79.0
MS.gene54155.t1 AT3G06630 24.651 215 150 6 340 547 432 641 4.81e-15 79.0
MS.gene54155.t1 AT3G06630 24.651 215 150 6 340 547 432 641 4.81e-15 79.0
MS.gene54155.t1 AT4G31170 31.013 158 101 4 353 504 146 301 5.32e-15 76.6
MS.gene54155.t1 AT4G31170 31.013 158 101 4 353 504 146 301 5.32e-15 76.6
MS.gene54155.t1 AT4G31170 31.013 158 101 4 353 504 146 301 5.32e-15 76.6
MS.gene54155.t1 AT4G08480 26.761 213 146 6 379 589 546 750 7.17e-15 78.6
MS.gene54155.t1 AT5G41730 25.316 237 149 8 380 592 274 506 8.69e-15 78.2
MS.gene54155.t1 AT5G41730 25.316 237 149 8 380 592 274 506 8.69e-15 78.2
MS.gene54155.t1 AT4G08500 26.066 211 150 6 379 589 378 582 8.69e-15 78.2
MS.gene54155.t1 AT3G63260 23.744 219 134 5 353 542 98 312 1.09e-14 76.3
MS.gene54155.t1 AT3G06630 24.651 215 150 6 340 547 348 557 1.20e-14 77.4
MS.gene54155.t1 AT5G49470 25.121 207 143 6 346 545 495 696 1.26e-14 77.8
MS.gene54155.t1 AT5G49470 25.121 207 143 6 346 545 495 696 1.51e-14 77.4
MS.gene54155.t1 AT3G58640 23.759 282 171 10 333 593 544 802 1.74e-14 77.4
MS.gene54155.t1 AT3G58640 23.759 282 171 10 333 593 544 802 1.74e-14 77.4
MS.gene54155.t1 AT3G01490 23.364 214 136 5 353 542 123 332 2.83e-14 75.1
MS.gene54155.t1 AT1G64300 27.311 238 146 10 380 592 274 509 3.86e-14 76.3
MS.gene54155.t1 AT1G64300 27.311 238 146 10 380 592 274 509 3.86e-14 76.3
MS.gene54155.t1 AT5G49470 26.812 138 97 2 455 592 671 804 8.04e-14 75.5
MS.gene54155.t1 AT1G63700 22.642 212 157 4 379 589 446 651 4.47e-13 72.8
MS.gene54155.t1 AT1G63700 22.642 212 157 4 379 589 446 651 4.47e-13 72.8
MS.gene54155.t1 AT3G07980 24.345 267 175 9 346 599 24 276 4.78e-13 73.2
MS.gene54155.t1 AT3G07980 24.345 267 175 9 346 599 24 276 4.93e-13 73.2
MS.gene54155.t1 AT5G54590 24.818 274 173 9 344 594 115 378 7.13e-13 71.2
MS.gene54155.t1 AT5G54590 24.818 274 173 9 344 594 115 378 7.13e-13 71.2
MS.gene54155.t1 AT5G54590 24.818 274 173 9 344 594 115 378 7.13e-13 71.2
MS.gene54155.t1 AT3G15220 23.506 251 178 8 346 589 19 262 7.95e-13 72.0
MS.gene54155.t1 AT1G34110 24.670 227 141 7 392 594 831 1051 8.34e-13 72.0
MS.gene54155.t1 AT1G34110 24.670 227 141 7 392 594 831 1051 9.34e-13 72.0
MS.gene54155.t1 AT1G54820 25.175 286 167 12 353 598 159 437 1.63e-12 70.5
MS.gene54155.t1 AT3G58760 23.715 253 172 10 352 592 181 424 2.58e-12 69.7
MS.gene54155.t1 AT3G58690 29.442 197 117 9 353 535 102 290 2.64e-12 69.3
MS.gene54155.t1 AT3G58760 23.715 253 172 10 352 592 244 487 2.85e-12 69.7
MS.gene54155.t1 AT3G58760 23.715 253 172 10 352 592 244 487 2.85e-12 69.7
MS.gene54155.t1 AT3G13530 23.596 267 177 9 346 599 24 276 3.41e-12 70.5
MS.gene54155.t1 AT5G56460 26.360 239 143 9 378 589 121 353 6.32e-12 68.2
MS.gene54155.t1 AT1G54820 27.358 212 126 9 353 543 159 363 7.32e-12 68.2
MS.gene54155.t1 AT1G01450 25.541 231 146 9 387 592 71 300 8.58e-12 68.2
MS.gene54155.t1 AT1G34300 27.619 210 127 8 344 538 486 685 1.02e-11 68.6
MS.gene54155.t1 AT4G04510 24.028 283 180 11 336 592 333 606 1.34e-11 67.8
MS.gene54155.t1 AT4G04510 24.028 283 180 11 336 592 335 608 1.43e-11 67.8
MS.gene54155.t1 AT4G23180 24.585 301 180 13 321 592 337 619 1.63e-11 67.8
MS.gene54155.t1 AT4G28490 26.027 292 171 13 339 592 680 964 2.09e-11 67.8
MS.gene54155.t1 AT1G17230 22.179 257 172 7 359 592 821 1072 2.35e-11 67.4
MS.gene54155.t1 AT3G04690 25.000 260 165 11 353 589 532 784 2.64e-11 67.4
MS.gene54155.t1 AT5G02290 30.270 185 108 7 374 544 109 286 2.65e-11 66.2
MS.gene54155.t1 AT5G02290 30.270 185 108 7 374 544 109 286 2.65e-11 66.2
MS.gene54155.t1 AT1G10620 25.000 200 134 7 353 544 385 576 2.94e-11 67.0
MS.gene54155.t1 AT1G17230 22.179 257 172 7 359 592 821 1072 2.94e-11 67.4
MS.gene54155.t1 AT3G51990 22.264 265 172 8 353 592 74 329 3.80e-11 65.5
MS.gene54155.t1 AT1G53165 23.333 210 154 6 381 589 59 262 4.08e-11 66.6
MS.gene54155.t1 AT1G53165 23.333 210 154 6 381 589 59 262 4.12e-11 66.6
MS.gene54155.t1 AT1G53165 23.333 210 154 6 381 589 59 262 4.51e-11 66.2
MS.gene54155.t1 AT4G04540 25.954 262 162 10 353 592 339 590 4.83e-11 66.2
MS.gene54155.t1 AT5G28680 25.000 260 165 11 353 589 536 788 5.87e-11 66.2
MS.gene54155.t1 AT5G28680 25.000 260 165 11 353 589 536 788 5.87e-11 66.2
MS.gene54155.t1 AT4G04540 25.954 262 162 10 353 592 368 619 6.12e-11 65.9
MS.gene54155.t1 AT3G20530 25.822 213 139 8 347 545 87 294 7.54e-11 64.7
MS.gene54155.t1 AT3G20530 25.822 213 139 8 347 545 87 294 8.12e-11 63.9
MS.gene54155.t1 AT3G06230 25.466 161 109 5 429 582 137 293 8.37e-11 63.9
MS.gene54155.t1 AT1G49160 22.800 250 167 8 341 574 27 266 8.50e-11 65.1
MS.gene54155.t1 AT5G58350 25.592 211 139 7 341 539 18 222 8.52e-11 65.1
MS.gene54155.t1 AT3G18750 22.619 252 165 9 341 574 27 266 8.55e-11 65.1
MS.gene54155.t1 AT3G18750 22.619 252 165 9 341 574 27 266 8.55e-11 65.1
MS.gene54155.t1 AT3G18750 22.619 252 165 9 341 574 27 266 8.55e-11 65.1
MS.gene54155.t1 AT2G19190 22.305 269 169 8 353 594 589 844 8.80e-11 65.5

Find 152 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTTTCAAGGGGAGAGAATT+AGG 0.131548 5.4:+61647262 MS.gene54155:CDS
CACATTCACAGAACCCATTT+TGG 0.137861 5.4:-61647203 None:intergenic
CTTGCAACGCGCTCGTTTCA+TGG 0.161083 5.4:+61647011 MS.gene54155:CDS
GAATGCTTGTTTGGGAAATA+TGG 0.212461 5.4:+61647843 MS.gene54155:CDS
GATTGTTACTATTATTATTA+AGG 0.240120 5.4:-61645868 None:intergenic
ATAGTTATGGCATGGTAATT+TGG 0.251431 5.4:+61649781 MS.gene54155:CDS
TGCTTCTCCAACACTCTTGC+AGG 0.275365 5.4:-61647878 None:intergenic
GTTTCAAGGGGAGAGAATTA+GGG 0.284749 5.4:+61647263 MS.gene54155:CDS
TGAGCTCCACAAAGATCTTC+TGG 0.287634 5.4:+61647564 MS.gene54155:CDS
ATTGGACCTAATTCTTATAA+AGG 0.292494 5.4:+61647472 MS.gene54155:CDS
TGCGATAAAGAAGCCCAAAA+TGG 0.301923 5.4:+61647189 MS.gene54155:CDS
TAGTTATGGCATGGTAATTT+GGG 0.304405 5.4:+61649782 MS.gene54155:CDS
TGGCAGTCCTTGGGAACTTC+AGG 0.306822 5.4:-61649885 None:intergenic
TAGGCATGGGAATGCTTGTT+TGG 0.318792 5.4:+61647834 MS.gene54155:CDS
TTGGACCTAATTCTTATAAA+GGG 0.323834 5.4:+61647473 MS.gene54155:CDS
ATGAGCAATGTTTATAGTTA+TGG 0.334957 5.4:+61649768 MS.gene54155:CDS
GCATCTGAAGCTGAATCTTT+TGG 0.336189 5.4:-61647333 None:intergenic
GTTTCTTCACATCAAGTTGA+TGG 0.337096 5.4:+61646883 MS.gene54155:CDS
GAGAAGAAAGGTTTCACCTT+AGG 0.338642 5.4:+61647094 MS.gene54155:CDS
GGGTTGTTCTTCTTGTAGTT+AGG 0.343784 5.4:+61647116 MS.gene54155:CDS
TAGGTTTGGTTGGCAGTCCT+TGG 0.349106 5.4:-61649895 None:intergenic
GATGAGAATGGAAGAGTCTT+TGG 0.349255 5.4:-61645774 None:intergenic
GATGTCTCTGTCACGCTCTC+AGG 0.350837 5.4:-61649744 None:intergenic
ATCGGAGAATTGAGGACGTT+TGG 0.353861 5.4:-61649955 None:intergenic
TAGACCCCTTTATAAGAATT+AGG 0.355185 5.4:-61647478 None:intergenic
GCGAGTTGGCCAACACTCTA+AGG 0.355419 5.4:-61645642 None:intergenic
GTGAATGTGAAGCTTTCATT+TGG 0.366497 5.4:+61647217 MS.gene54155:CDS
GGTTGAAAACAGATAATTGC+AGG 0.369964 5.4:+61649717 MS.gene54155:intron
TGTTCAACTGTGTCTTCATC+GGG 0.371516 5.4:-61645680 None:intergenic
AAGCTGAAAGGGTGTGAAAA+AGG 0.373240 5.4:+61647526 MS.gene54155:CDS
GGGAGAGAATTAGGGGAGAT+TGG 0.373979 5.4:+61647271 MS.gene54155:CDS
CTTGTTCTTGTTGATGAGAA+TGG 0.376077 5.4:-61645786 None:intergenic
AAGCTTTCATTTGGACTTTG+TGG 0.376985 5.4:+61647226 MS.gene54155:CDS
GAACAAGAAGCTTCAGAGTA+AGG 0.378267 5.4:+61647711 MS.gene54155:CDS
TTATCAGGAAGCTGAGTTCC+AGG 0.384759 5.4:-61645959 None:intergenic
ATTGTAATGATTACGAATGT+TGG 0.387334 5.4:-61645990 None:intergenic
TTCTTCTAAGAAACTTGCTT+GGG 0.388623 5.4:+61645904 MS.gene54155:CDS
CCTTGGGAACTTCAGGTCTA+AGG 0.390694 5.4:-61649878 None:intergenic
AGAAGAAAGGTTTCACCTTA+GGG 0.393038 5.4:+61647095 MS.gene54155:CDS
ATTTGGACTTTGTGGGTGTC+AGG 0.393965 5.4:+61647234 MS.gene54155:CDS
CTTCTTCTAAGAAACTTGCT+TGG 0.396933 5.4:+61645903 MS.gene54155:CDS
TGGTCATGATGGTGAGGTTC+AGG 0.404945 5.4:+61646958 MS.gene54155:CDS
ATGCCAACTGCTGCCTGCAC+AGG 0.409266 5.4:-61649843 None:intergenic
TTGTTCAACTGTGTCTTCAT+CGG 0.412101 5.4:-61645681 None:intergenic
ATTGGAGAAGATAGTGGTAG+TGG 0.419042 5.4:+61647289 MS.gene54155:CDS
AGGTTTGGTTGGCAGTCCTT+GGG 0.420145 5.4:-61649894 None:intergenic
CGCAGAGGATTCTGTTAGAT+AGG 0.420687 5.4:+61647815 MS.gene54155:CDS
ATGTTGGAGATAAGATTATC+AGG 0.421188 5.4:-61645974 None:intergenic
TTCTGCACTTTCTCCTGTGC+AGG 0.423025 5.4:+61649830 MS.gene54155:CDS
AGAACTGCAGAATGTTTCTA+TGG 0.424331 5.4:-61647603 None:intergenic
CTGTGCCCTCTTGCTACAAA+TGG 0.429078 5.4:-61647065 None:intergenic
CACTCTAAGGCTGCAGCCAT+TGG 0.437134 5.4:-61645629 None:intergenic
AGTATGAAACTGATGGTTAT+AGG 0.442176 5.4:+61647905 MS.gene54155:CDS
CAAGTTGATGGAACAGGCAT+TGG 0.443439 5.4:+61646895 MS.gene54155:CDS
GTTGAGTTTACAGAACAGAT+TGG 0.447078 5.4:+61647454 MS.gene54155:CDS
TACCTCATCTTTCATTGTAT+CGG 0.450015 5.4:+61647363 MS.gene54155:CDS
AGGCATGGGAATGCTTGTTT+GGG 0.450997 5.4:+61647835 MS.gene54155:CDS
GTTGTATGGTTGCAGCAATA+TGG 0.451787 5.4:-61649985 None:intergenic
GTTCTTCTTGTAGTTAGGTC+CGG 0.455700 5.4:+61647121 MS.gene54155:CDS
CAGCAATATGGCTAAAATAT+CGG 0.456068 5.4:-61649973 None:intergenic
AATGCTTGTTTGGGAAATAT+GGG 0.457874 5.4:+61647844 MS.gene54155:CDS
TCACATCAAGTTGATGGAAC+AGG 0.460662 5.4:+61646889 MS.gene54155:CDS
CAAGCAAGTTTCTTAGAAGA+AGG 0.461101 5.4:-61645902 None:intergenic
AGCTTTCATTTGGACTTTGT+GGG 0.461461 5.4:+61647227 MS.gene54155:CDS
CGTTTCATGGCCTGCAATGT+CGG 0.462817 5.4:+61647024 MS.gene54155:CDS
AAGAACAAGTTTCACAAACT+TGG 0.463851 5.4:+61645800 MS.gene54155:CDS
GCACAGATCTTTGAGAAGAA+AGG 0.464070 5.4:+61647082 MS.gene54155:CDS
AATCTTACTCAACTTTATCC+TGG 0.465155 5.4:+61645941 MS.gene54155:CDS
TTCTTATAAAGGGGTCTACA+TGG 0.466437 5.4:+61647483 MS.gene54155:CDS
ATGGTGGTTGTGGTGCGAGT+TGG 0.469087 5.4:-61645656 None:intergenic
GCGATAAAGAAGCCCAAAAT+GGG 0.470964 5.4:+61647190 MS.gene54155:CDS
AACTGTGTCTTCATCGGGGA+TGG 0.471815 5.4:-61645675 None:intergenic
GCAGTTGGCATTGCTGCTTG+TGG 0.472431 5.4:+61649855 MS.gene54155:CDS
ATTACAATTCTCTTCCTCTC+AGG 0.474889 5.4:+61646005 MS.gene54155:CDS
TTCATCGGGGATGGTGGTTG+TGG 0.476270 5.4:-61645666 None:intergenic
TCATTGTATCGGTCGATGAA+TGG 0.480681 5.4:+61647374 MS.gene54155:CDS
TTAGAAGAAGGAGGAGACTC+AGG 0.481865 5.4:-61645890 None:intergenic
GGGGAGATTGGAGAAGATAG+TGG 0.483318 5.4:+61647283 MS.gene54155:CDS
GTAATTTGGGAGATGGTTAG+TGG 0.485452 5.4:+61649795 MS.gene54155:CDS
ACTTCAAAGCATTCTCAACT+CGG 0.485503 5.4:-61647165 None:intergenic
GTCTACATGGGGAAAAGAGT+TGG 0.486365 5.4:+61647496 MS.gene54155:CDS
TCTCCTGTGCAGGCAGCAGT+TGG 0.491474 5.4:+61649840 MS.gene54155:CDS
TGGCATGGTAATTTGGGAGA+TGG 0.495831 5.4:+61649788 MS.gene54155:CDS
ATGCGTGGTGACTAAGTTCA+TGG 0.501350 5.4:+61647657 MS.gene54155:CDS
TTATAGGTGGCTTGCTCCTG+AGG 0.507977 5.4:+61647921 MS.gene54155:CDS
TAAGGATATTGTTAGAATTG+CGG 0.510429 5.4:+61647729 MS.gene54155:CDS
CTTCAAAGCATTCTCAACTC+GGG 0.514405 5.4:-61647164 None:intergenic
TTAGTTCCAGAAGATCTTTG+TGG 0.514520 5.4:-61647570 None:intergenic
GCCTGCAATGTCGGTTGCGT+TGG 0.515087 5.4:+61647033 MS.gene54155:CDS
TCCAACGCAACCGACATTGC+AGG 0.519201 5.4:-61647034 None:intergenic
AGAAGATAGTGGTAGTGGAA+AGG 0.520028 5.4:+61647294 MS.gene54155:CDS
ATCAAGTTTATGAATGATCA+TGG 0.521097 5.4:+61647769 MS.gene54155:CDS
AATACATTATGACAAAATGC+TGG 0.524580 5.4:+61649919 MS.gene54155:CDS
ATGTCTCTGTCACGCTCTCA+GGG 0.527778 5.4:-61649743 None:intergenic
GAGAATTGAGGACGTTTGGA+AGG 0.527900 5.4:-61649951 None:intergenic
TTGGAATCGAGAAGCTGAAA+GGG 0.528784 5.4:+61647515 MS.gene54155:CDS
TGTCAGGAAGAGAGTTTCAA+GGG 0.533723 5.4:+61647250 MS.gene54155:CDS
TTTCAAGGGGAGAGAATTAG+GGG 0.533893 5.4:+61647264 MS.gene54155:CDS
GATGGTGAGGTTCAGGCTCA+AGG 0.537632 5.4:+61646965 MS.gene54155:CDS
CAAGAGAGTGGTGGTCATGA+TGG 0.544175 5.4:+61646947 MS.gene54155:CDS
TGGCTGCAGCCTTAGAGTGT+TGG 0.551534 5.4:+61645633 MS.gene54155:CDS
CAAGAGTGTTGGAGAAGCAA+TGG 0.554989 5.4:+61647882 MS.gene54155:CDS
TTGGGAGATGGTTAGTGGTG+AGG 0.559835 5.4:+61649800 MS.gene54155:CDS
GCTAAAATATCGGAGAATTG+AGG 0.562943 5.4:-61649963 None:intergenic
AGGATTCTGTTAGATAGGCA+TGG 0.562984 5.4:+61647820 MS.gene54155:CDS
AGAATTGAGGACGTTTGGAA+GGG 0.563108 5.4:-61649950 None:intergenic
TCTTATAAAGGGGTCTACAT+GGG 0.563241 5.4:+61647484 MS.gene54155:CDS
GTGTCAGGAAGAGAGTTTCA+AGG 0.564199 5.4:+61647249 MS.gene54155:CDS
GTTTCTCCATTTGTAGCAAG+AGG 0.565295 5.4:+61647059 MS.gene54155:CDS
TCTTGTTGAATCAAAATCGC+AGG 0.568291 5.4:-61646929 None:intergenic
AGAATGGAAGAGTCTTTGGA+AGG 0.571795 5.4:-61645770 None:intergenic
GGATTCTGTTAGATAGGCAT+GGG 0.573192 5.4:+61647821 MS.gene54155:CDS
GAATTGAGGACGTTTGGAAG+GGG 0.573776 5.4:-61649949 None:intergenic
ACAGGCTGAATTTGATATGA+AGG 0.574972 5.4:+61646856 MS.gene54155:intron
GAATGGCAGACGATAAAGTC+GGG 0.578635 5.4:+61647391 MS.gene54155:CDS
ATGGTGAGGTTCAGGCTCAA+GGG 0.579331 5.4:+61646966 MS.gene54155:CDS
TACAAGAAGAACAACCCCTA+AGG 0.582595 5.4:-61647110 None:intergenic
GCAAGTTTCTTAGAAGAAGG+AGG 0.589011 5.4:-61645899 None:intergenic
TTTCTCCATTTGTAGCAAGA+GGG 0.591140 5.4:+61647060 MS.gene54155:CDS
GAAGAAAGGTTTCACCTTAG+GGG 0.593785 5.4:+61647096 MS.gene54155:CDS
TGGACCTAATTCTTATAAAG+GGG 0.597478 5.4:+61647474 MS.gene54155:CDS
GTCACTGCCTGCAAGAGTGT+TGG 0.600671 5.4:+61647871 MS.gene54155:CDS
AGAAACATTCTGCAGTTCTG+TGG 0.601711 5.4:+61647607 MS.gene54155:CDS
GTGGTGATGAGATTGAGAAA+TGG 0.602873 5.4:+61647413 MS.gene54155:CDS
CCTTAGACCTGAAGTTCCCA+AGG 0.606630 5.4:+61649878 MS.gene54155:CDS
CTTATAAAGGGGTCTACATG+GGG 0.607941 5.4:+61647485 MS.gene54155:CDS
TGTGTCTTCATCGGGGATGG+TGG 0.609581 5.4:-61645672 None:intergenic
ATGAAAGATGAGGTAGGCAA+AGG 0.612602 5.4:-61647355 None:intergenic
AAGAAGTAGCTTCTGATCTG+TGG 0.612811 5.4:-61645727 None:intergenic
TTGATTCAACAAGAGAGTGG+TGG 0.613857 5.4:+61646938 MS.gene54155:CDS
CAATGTTTATAGTTATGGCA+TGG 0.619440 5.4:+61649773 MS.gene54155:CDS
GCAGTTCTGTGGAATATGTG+TGG 0.622847 5.4:+61647618 MS.gene54155:CDS
GTTGGAATCGAGAAGCTGAA+AGG 0.624258 5.4:+61647514 MS.gene54155:CDS
AATTGCGGTTGATGTAGCTG+AGG 0.627622 5.4:+61647744 MS.gene54155:CDS
ATTGCGGTTGATGTAGCTGA+GGG 0.629504 5.4:+61647745 MS.gene54155:CDS
GACCGATACAATGAAAGATG+AGG 0.639889 5.4:-61647365 None:intergenic
GTGGTGACTAAGTTCATGGT+AGG 0.643905 5.4:+61647661 MS.gene54155:CDS
TAGTCACCACGCATAACCCA+TGG 0.650455 5.4:-61647648 None:intergenic
TGAATGGCAGACGATAAAGT+CGG 0.664247 5.4:+61647390 MS.gene54155:CDS
ATGAAACTGATGGTTATAGG+TGG 0.668554 5.4:+61647908 MS.gene54155:CDS
GTCAGGAAGAGAGTTTCAAG+GGG 0.668955 5.4:+61647251 MS.gene54155:CDS
CTTCTGGAACTAATGACATG+TGG 0.669994 5.4:+61647580 MS.gene54155:CDS
GATACAATGAAAGATGAGGT+AGG 0.673973 5.4:-61647361 None:intergenic
GCAATGGAGTATGAAACTGA+TGG 0.679395 5.4:+61647898 MS.gene54155:CDS
ACAGAGATCTTAATACGCAG+AGG 0.689031 5.4:+61647800 MS.gene54155:CDS
GAGTGGTGGTCATGATGGTG+AGG 0.691345 5.4:+61646952 MS.gene54155:CDS
TGGCAGACGATAAAGTCGGG+TGG 0.713223 5.4:+61647394 MS.gene54155:CDS
ATATGTGTGGATGATAACCA+TGG 0.720640 5.4:+61647631 MS.gene54155:CDS
TGATAACCATGGGTTATGCG+TGG 0.733061 5.4:+61647642 MS.gene54155:CDS
TATGTGTGGATGATAACCAT+GGG 0.735440 5.4:+61647632 MS.gene54155:CDS
GTTCAACTGTGTCTTCATCG+GGG 0.755540 5.4:-61645679 None:intergenic
TTGCGGTTGATGTAGCTGAG+GGG 0.764086 5.4:+61647746 MS.gene54155:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTATTAACTTGAAAAAAA+AGG - chr5.4:61647964-61647983 None:intergenic 10.0%
!!! ATTATTAACTTGAAAAAAAA+GGG - chr5.4:61647963-61647982 None:intergenic 10.0%
!! ATATAATCTAGTATTCAATT+TGG - chr5.4:61646073-61646092 None:intergenic 15.0%
!! CAATGAAATATGATAAAATT+GGG + chr5.4:61646608-61646627 MS.gene54155:intron 15.0%
!! GATTGTTACTATTATTATTA+AGG - chr5.4:61645871-61645890 None:intergenic 15.0%
!! GTAAATTATTAAGATATGTT+AGG - chr5.4:61649149-61649168 None:intergenic 15.0%
!! TCAATGAAATATGATAAAAT+TGG + chr5.4:61646607-61646626 MS.gene54155:intron 15.0%
!!! AATCTTTCTTTGAAATATAT+TGG - chr5.4:61646664-61646683 None:intergenic 15.0%
!!! ATTTTGTCATAATGTATTTT+AGG - chr5.4:61649917-61649936 None:intergenic 15.0%
!! AGCATAACAAAAATAAACTA+AGG + chr5.4:61646748-61646767 MS.gene54155:intron 20.0%
!! CTAAAGAAATAAAGTTTAGA+GGG - chr5.4:61646725-61646744 None:intergenic 20.0%
!! TGTAATTTCAAAACATTGAT+GGG + chr5.4:61646536-61646555 MS.gene54155:intron 20.0%
!! TGTATCTAAATCTAAGTATA+GGG + chr5.4:61648190-61648209 MS.gene54155:intron 20.0%
!! TTGTAATTTCAAAACATTGA+TGG + chr5.4:61646535-61646554 MS.gene54155:intron 20.0%
!! TTGTATCTAAATCTAAGTAT+AGG + chr5.4:61648189-61648208 MS.gene54155:intron 20.0%
!!! ATAGAGTAAACAATTGTTTT+TGG + chr5.4:61646131-61646150 MS.gene54155:intron 20.0%
!!! TACCAGAATTAATTTGAAAA+TGG + chr5.4:61649270-61649289 MS.gene54155:intron 20.0%
! AATACATTATGACAAAATGC+TGG + chr5.4:61649919-61649938 MS.gene54155:CDS 25.0%
! ACAAAAATAAACTAAGGTCA+TGG + chr5.4:61646754-61646773 MS.gene54155:intron 25.0%
! ACTAAAATACTCGCATTAAT+TGG + chr5.4:61648370-61648389 MS.gene54155:intron 25.0%
! AGAAAATTCACATAACAACT+TGG - chr5.4:61648846-61648865 None:intergenic 25.0%
! AGATCAAATTCTATCAAACA+TGG + chr5.4:61648601-61648620 MS.gene54155:intron 25.0%
! ATCAAATTCTATCAAACATG+GGG + chr5.4:61648603-61648622 MS.gene54155:intron 25.0%
! ATCAAGTTTATGAATGATCA+TGG + chr5.4:61647769-61647788 MS.gene54155:CDS 25.0%
! ATGAGCAATGTTTATAGTTA+TGG + chr5.4:61649768-61649787 MS.gene54155:CDS 25.0%
! ATTGGACCTAATTCTTATAA+AGG + chr5.4:61647472-61647491 MS.gene54155:CDS 25.0%
! ATTGTAATGATTACGAATGT+TGG - chr5.4:61645993-61646012 None:intergenic 25.0%
! CCAAAAACTATATGGTTATT+TGG - chr5.4:61649496-61649515 None:intergenic 25.0%
! GATCAAATTCTATCAAACAT+GGG + chr5.4:61648602-61648621 MS.gene54155:intron 25.0%
! GCTAAAGAAATAAAGTTTAG+AGG - chr5.4:61646726-61646745 None:intergenic 25.0%
! TAAGGATATTGTTAGAATTG+CGG + chr5.4:61647729-61647748 MS.gene54155:CDS 25.0%
! TAGAGATATGAAGACAAAAA+AGG - chr5.4:61646033-61646052 None:intergenic 25.0%
! TATCTCTAGTGATTATGTAA+AGG + chr5.4:61646045-61646064 MS.gene54155:intron 25.0%
! TGGACTGTTTAATTAAACAA+AGG + chr5.4:61648424-61648443 MS.gene54155:intron 25.0%
! TTGGACCTAATTCTTATAAA+GGG + chr5.4:61647473-61647492 MS.gene54155:CDS 25.0%
!! AGTGTTAATAAGTATTGTCT+TGG + chr5.4:61648458-61648477 MS.gene54155:intron 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG + chr5.4:61649653-61649672 MS.gene54155:intron 25.0%
!! CCAAATAACCATATAGTTTT+TGG + chr5.4:61649493-61649512 MS.gene54155:intron 25.0%
!! CTCCATTTTCAAATTAATTC+TGG - chr5.4:61649275-61649294 None:intergenic 25.0%
!! CTTTTAATCAGTGAGAATAA+GGG - chr5.4:61648573-61648592 None:intergenic 25.0%
!! TATCTGTTTTCAACCAAAAA+AGG - chr5.4:61649712-61649731 None:intergenic 25.0%
!!! ATCTCTTTTTTATGCTCTTA+TGG + chr5.4:61648955-61648974 MS.gene54155:intron 25.0%
!!! CTATAGTTCTTTCTCTTTTT+TGG + chr5.4:61646178-61646197 MS.gene54155:intron 25.0%
!!! GTCATAATGTATTTTAGGTT+TGG - chr5.4:61649912-61649931 None:intergenic 25.0%
!!! TAATGTATTTTAGGTTTGGT+TGG - chr5.4:61649908-61649927 None:intergenic 25.0%
!!! TGTCATATAAGTGTTGTTTA+AGG + chr5.4:61648285-61648304 MS.gene54155:intron 25.0%
!!! TTCTTACTGATTTCCTTTTT+TGG + chr5.4:61648794-61648813 MS.gene54155:intron 25.0%
!!! TTTTGTTTATAGTTATGCAC+AGG + chr5.4:61646838-61646857 MS.gene54155:intron 25.0%
AAAGGCAATTATGTATAGCT+AGG - chr5.4:61648025-61648044 None:intergenic 30.0%
AAGAACAAGTTTCACAAACT+TGG + chr5.4:61645800-61645819 MS.gene54155:CDS 30.0%
AAGGTATGCATGCATTATAA+AGG - chr5.4:61649185-61649204 None:intergenic 30.0%
AATCTTACTCAACTTTATCC+TGG + chr5.4:61645941-61645960 MS.gene54155:CDS 30.0%
AATGCTTGTTTGGGAAATAT+GGG + chr5.4:61647844-61647863 MS.gene54155:CDS 30.0%
AATTCTTCCTTGAACACATA+CGG - chr5.4:61648762-61648781 None:intergenic 30.0%
AGGTATGCATGCATTATAAA+GGG - chr5.4:61649184-61649203 None:intergenic 30.0%
AGTATGAAACTGATGGTTAT+AGG + chr5.4:61647905-61647924 MS.gene54155:CDS 30.0%
AGTGGTTAGTGGTTAAATAA+AGG - chr5.4:61649204-61649223 None:intergenic 30.0%
ATAGTTATGGCATGGTAATT+TGG + chr5.4:61649781-61649800 MS.gene54155:CDS 30.0%
ATGTTGGAGATAAGATTATC+AGG - chr5.4:61645977-61645996 None:intergenic 30.0%
CAATGTTTATAGTTATGGCA+TGG + chr5.4:61649773-61649792 MS.gene54155:CDS 30.0%
CACAACAACCAAAAACTATA+TGG - chr5.4:61649504-61649523 None:intergenic 30.0%
CAGCAATATGGCTAAAATAT+CGG - chr5.4:61649976-61649995 None:intergenic 30.0%
CTAGAAAGTAAGTGTATACA+AGG - chr5.4:61648897-61648916 None:intergenic 30.0%
GAAGAAGAAAACACCAAAAA+AGG - chr5.4:61648810-61648829 None:intergenic 30.0%
GGAAAAAAACAATCGAACAA+AGG + chr5.4:61649400-61649419 MS.gene54155:intron 30.0%
GTATCAGATACAGTATGTAT+CGG + chr5.4:61648085-61648104 MS.gene54155:intron 30.0%
TACCTCATCTTTCATTGTAT+CGG + chr5.4:61647363-61647382 MS.gene54155:CDS 30.0%
TACTAATTCTCTTATGCTCA+TGG + chr5.4:61648221-61648240 MS.gene54155:intron 30.0%
TAGACCCCTTTATAAGAATT+AGG - chr5.4:61647481-61647500 None:intergenic 30.0%
TAGTTATGGCATGGTAATTT+GGG + chr5.4:61649782-61649801 MS.gene54155:CDS 30.0%
TCAAATTCTATCAAACATGG+GGG + chr5.4:61648604-61648623 MS.gene54155:intron 30.0%
TGCAACCATACAACAAAAAT+AGG + chr5.4:61649994-61650013 MS.gene54155:CDS 30.0%
TGGACCTAATTCTTATAAAG+GGG + chr5.4:61647474-61647493 MS.gene54155:CDS 30.0%
TGTATAATGATATACACGAG+TGG - chr5.4:61649222-61649241 None:intergenic 30.0%
TGTGAAAAAGACCATATCAA+AGG - chr5.4:61649313-61649332 None:intergenic 30.0%
TTATTGAAAGATTCGTCCTT+AGG + chr5.4:61646294-61646313 MS.gene54155:intron 30.0%
! GCTTTTAATCAGTGAGAATA+AGG - chr5.4:61648574-61648593 None:intergenic 30.0%
! TCCTTAGGTAATTTAGTCTT+CGG + chr5.4:61646451-61646470 MS.gene54155:intron 30.0%
! TTCTTCTAAGAAACTTGCTT+GGG + chr5.4:61645904-61645923 MS.gene54155:CDS 30.0%
! TTTGACCAATTTTTCATGAC+CGG - chr5.4:61647143-61647162 None:intergenic 30.0%
! TTTTCAACCAAAAAAGGAAG+AGG - chr5.4:61649706-61649725 None:intergenic 30.0%
!! AAAACATTGATGGGTTATAG+TGG + chr5.4:61646545-61646564 MS.gene54155:intron 30.0%
!!! ATTTTGATTCAACAAGAGAG+TGG + chr5.4:61646935-61646954 MS.gene54155:CDS 30.0%
AACTCTAATAATCCGGAGTT+TGG + chr5.4:61646214-61646233 MS.gene54155:intron 35.0%
AAGCTTTCATTTGGACTTTG+TGG + chr5.4:61647226-61647245 MS.gene54155:CDS 35.0%
AATGAATAGAAGCAAACCTC+AGG - chr5.4:61647940-61647959 None:intergenic 35.0%
ACACCAATTCACATGAATGT+TGG + chr5.4:61649596-61649615 MS.gene54155:intron 35.0%
ACAGGCTGAATTTGATATGA+AGG + chr5.4:61646856-61646875 MS.gene54155:intron 35.0%
AGAAGAAAGGTTTCACCTTA+GGG + chr5.4:61647095-61647114 MS.gene54155:CDS 35.0%
AGCTTTCATTTGGACTTTGT+GGG + chr5.4:61647227-61647246 MS.gene54155:CDS 35.0%
ATATGTGTGGATGATAACCA+TGG + chr5.4:61647631-61647650 MS.gene54155:CDS 35.0%
ATGAAACTGATGGTTATAGG+TGG + chr5.4:61647908-61647927 MS.gene54155:CDS 35.0%
ATTACAATTCTCTTCCTCTC+AGG + chr5.4:61646005-61646024 MS.gene54155:CDS 35.0%
CAAGCAAGTTTCTTAGAAGA+AGG - chr5.4:61645905-61645924 None:intergenic 35.0%
CACGTCAAATCATTATTCGA+TGG - chr5.4:61648130-61648149 None:intergenic 35.0%
CACTCTGAACTCTAATAATC+CGG + chr5.4:61646207-61646226 MS.gene54155:intron 35.0%
CATCACAGTCTATGTGTTAA+AGG - chr5.4:61648043-61648062 None:intergenic 35.0%
CATTATGAGTCAATCTTTGC+AGG - chr5.4:61648167-61648186 None:intergenic 35.0%
GAATGCTTGTTTGGGAAATA+TGG + chr5.4:61647843-61647862 MS.gene54155:CDS 35.0%
GATACAATGAAAGATGAGGT+AGG - chr5.4:61647364-61647383 None:intergenic 35.0%
GATACAGTATGTATCGGATA+CGG + chr5.4:61648091-61648110 MS.gene54155:intron 35.0%
GCTAAAATATCGGAGAATTG+AGG - chr5.4:61649966-61649985 None:intergenic 35.0%
GGTTGAAAACAGATAATTGC+AGG + chr5.4:61649717-61649736 MS.gene54155:intron 35.0%
GTGAATGTGAAGCTTTCATT+TGG + chr5.4:61647217-61647236 MS.gene54155:CDS 35.0%
GTGTGTTTGTGTGATATGTA+AGG - chr5.4:61649580-61649599 None:intergenic 35.0%
GTTGAGTTTACAGAACAGAT+TGG + chr5.4:61647454-61647473 MS.gene54155:CDS 35.0%
GTTGTTGTGCATAAATAAGC+TGG + chr5.4:61649515-61649534 MS.gene54155:intron 35.0%
TAAAACCGAGTTCAATTCCT+AGG - chr5.4:61646277-61646296 None:intergenic 35.0%
TAAAGATCTGAACTTCCTTG+AGG - chr5.4:61648674-61648693 None:intergenic 35.0%
TATGTGTGGATGATAACCAT+GGG + chr5.4:61647632-61647651 MS.gene54155:CDS 35.0%
TCACCAACATTCATGTGAAT+TGG - chr5.4:61649602-61649621 None:intergenic 35.0%
TCCGAAGACTAAATTACCTA+AGG - chr5.4:61646455-61646474 None:intergenic 35.0%
TCGCTAAAGAAAGACACATT+CGG - chr5.4:61646409-61646428 None:intergenic 35.0%
TCTCAAATGTGTCTTTCCTT+AGG + chr5.4:61646436-61646455 MS.gene54155:intron 35.0%
TCTTATAAAGGGGTCTACAT+GGG + chr5.4:61647484-61647503 MS.gene54155:CDS 35.0%
TCTTGTTGAATCAAAATCGC+AGG - chr5.4:61646932-61646951 None:intergenic 35.0%
TGACACTTGTAATGAGACAA+AGG + chr5.4:61648527-61648546 MS.gene54155:intron 35.0%
TTAGTTCCAGAAGATCTTTG+TGG - chr5.4:61647573-61647592 None:intergenic 35.0%
TTCTTATAAAGGGGTCTACA+TGG + chr5.4:61647483-61647502 MS.gene54155:CDS 35.0%
TTGTTCAACTGTGTCTTCAT+CGG - chr5.4:61645684-61645703 None:intergenic 35.0%
TTTCACCTAGGAATTGAACT+CGG + chr5.4:61646269-61646288 MS.gene54155:intron 35.0%
TTTCTCCATTTGTAGCAAGA+GGG + chr5.4:61647060-61647079 MS.gene54155:CDS 35.0%
! AAAATTCCAGTGCAGTGTTT+TGG + chr5.4:61648925-61648944 MS.gene54155:intron 35.0%
! ACATTCACAGAACCCATTTT+GGG - chr5.4:61647205-61647224 None:intergenic 35.0%
! ACTTCAAAGCATTCTCAACT+CGG - chr5.4:61647168-61647187 None:intergenic 35.0%
! AGAACTGCAGAATGTTTCTA+TGG - chr5.4:61647606-61647625 None:intergenic 35.0%
! CATGTCATTTCATGTTGTAC+TGG - chr5.4:61648982-61649001 None:intergenic 35.0%
! CTTCTTCTAAGAAACTTGCT+TGG + chr5.4:61645903-61645922 MS.gene54155:CDS 35.0%
! CTTGTTCTTGTTGATGAGAA+TGG - chr5.4:61645789-61645808 None:intergenic 35.0%
! TGCAAAAAGTTGTTTCACCT+AGG + chr5.4:61646257-61646276 MS.gene54155:intron 35.0%
! TTTTAGACCGTATGTGTTCA+AGG + chr5.4:61648752-61648771 MS.gene54155:intron 35.0%
!! GTTTCTTCACATCAAGTTGA+TGG + chr5.4:61646883-61646902 MS.gene54155:CDS 35.0%
!!! TGTTCGATTGTTTTTTTCCC+CGG - chr5.4:61649399-61649418 None:intergenic 35.0%
!!! TTTGTCTCCTCTTCCTTTTT+TGG + chr5.4:61649696-61649715 MS.gene54155:intron 35.0%
AAAGTAGCAGTTGTGAAGTG+AGG + chr5.4:61648401-61648420 MS.gene54155:intron 40.0%
AAGAAGTAGCTTCTGATCTG+TGG - chr5.4:61645730-61645749 None:intergenic 40.0%
ACAAAGAGTTAGCACGAACT+AGG - chr5.4:61649681-61649700 None:intergenic 40.0%
ACAGAGATCTTAATACGCAG+AGG + chr5.4:61647800-61647819 MS.gene54155:CDS 40.0%
ACCAAGTGAATGAACTCATG+TGG - chr5.4:61646333-61646352 None:intergenic 40.0%
ACCACATGAGTTCATTCACT+TGG + chr5.4:61646329-61646348 MS.gene54155:intron 40.0%
AGAAACATTCTGCAGTTCTG+TGG + chr5.4:61647607-61647626 MS.gene54155:CDS 40.0%
AGAATGGAAGAGTCTTTGGA+AGG - chr5.4:61645773-61645792 None:intergenic 40.0%
AGAATTGAGGACGTTTGGAA+GGG - chr5.4:61649953-61649972 None:intergenic 40.0%
AGGATTCTGTTAGATAGGCA+TGG + chr5.4:61647820-61647839 MS.gene54155:CDS 40.0%
AGTTTCAAGGGGAGAGAATT+AGG + chr5.4:61647262-61647281 MS.gene54155:CDS 40.0%
ATAAAGCCAAAACACTGCAC+TGG - chr5.4:61648934-61648953 None:intergenic 40.0%
ATGAAAGATGAGGTAGGCAA+AGG - chr5.4:61647358-61647377 None:intergenic 40.0%
CAAAGAGTTAGCACGAACTA+GGG - chr5.4:61649680-61649699 None:intergenic 40.0%
CATGCTCAAACAATGATGTC+AGG - chr5.4:61649126-61649145 None:intergenic 40.0%
CATGTCTCAAGCCTTTGATA+TGG + chr5.4:61649299-61649318 MS.gene54155:intron 40.0%
CGAATGTTTCTTCCGTTAGT+CGG + chr5.4:61646503-61646522 MS.gene54155:intron 40.0%
CTTATAAAGGGGTCTACATG+GGG + chr5.4:61647485-61647504 MS.gene54155:CDS 40.0%
CTTGTAATGAGACAAAGGAG+CGG + chr5.4:61648532-61648551 MS.gene54155:intron 40.0%
GAACAAGAAGCTTCAGAGTA+AGG + chr5.4:61647711-61647730 MS.gene54155:CDS 40.0%
GAAGAAAGGTTTCACCTTAG+GGG + chr5.4:61647096-61647115 MS.gene54155:CDS 40.0%
GACCGATACAATGAAAGATG+AGG - chr5.4:61647368-61647387 None:intergenic 40.0%
GAGAAGAAAGGTTTCACCTT+AGG + chr5.4:61647094-61647113 MS.gene54155:CDS 40.0%
GATGAGAATGGAAGAGTCTT+TGG - chr5.4:61645777-61645796 None:intergenic 40.0%
GCAAGACTATTCCTATCTTC+TGG - chr5.4:61646240-61646259 None:intergenic 40.0%
GCAAGTTTCTTAGAAGAAGG+AGG - chr5.4:61645902-61645921 None:intergenic 40.0%
GCAATGGAGTATGAAACTGA+TGG + chr5.4:61647898-61647917 MS.gene54155:CDS 40.0%
GCGATAAAGAAGCCCAAAAT+GGG + chr5.4:61647190-61647209 MS.gene54155:CDS 40.0%
GGATTCTGTTAGATAGGCAT+GGG + chr5.4:61647821-61647840 MS.gene54155:CDS 40.0%
GGGTTGTTCTTCTTGTAGTT+AGG + chr5.4:61647116-61647135 MS.gene54155:CDS 40.0%
GTAATTTGGGAGATGGTTAG+TGG + chr5.4:61649795-61649814 MS.gene54155:CDS 40.0%
GTTCTTCTTGTAGTTAGGTC+CGG + chr5.4:61647121-61647140 MS.gene54155:CDS 40.0%
GTTGTATGGTTGCAGCAATA+TGG - chr5.4:61649988-61650007 None:intergenic 40.0%
GTTTCAAGGGGAGAGAATTA+GGG + chr5.4:61647263-61647282 MS.gene54155:CDS 40.0%
GTTTCTCCATTTGTAGCAAG+AGG + chr5.4:61647059-61647078 MS.gene54155:CDS 40.0%
TACAAGAAGAACAACCCCTA+AGG - chr5.4:61647113-61647132 None:intergenic 40.0%
TAGGTCCGGTCATGAAAAAT+TGG + chr5.4:61647135-61647154 MS.gene54155:CDS 40.0%
TATCAAAGGCTTGAGACATG+CGG - chr5.4:61649299-61649318 None:intergenic 40.0%
TGAATGGCAGACGATAAAGT+CGG + chr5.4:61647390-61647409 MS.gene54155:CDS 40.0%
TGATATACACGAGTGGTTAG+TGG - chr5.4:61649215-61649234 None:intergenic 40.0%
TGCGATAAAGAAGCCCAAAA+TGG + chr5.4:61647189-61647208 MS.gene54155:CDS 40.0%
TGTCAGGAAGAGAGTTTCAA+GGG + chr5.4:61647250-61647269 MS.gene54155:CDS 40.0%
TGTTCAACTGTGTCTTCATC+GGG - chr5.4:61645683-61645702 None:intergenic 40.0%
TTGATTCAACAAGAGAGTGG+TGG + chr5.4:61646938-61646957 MS.gene54155:CDS 40.0%
TTGGAATCGAGAAGCTGAAA+GGG + chr5.4:61647515-61647534 MS.gene54155:CDS 40.0%
TTTCAAGGGGAGAGAATTAG+GGG + chr5.4:61647264-61647283 MS.gene54155:CDS 40.0%
! AAGCTGAAAGGGTGTGAAAA+AGG + chr5.4:61647526-61647545 MS.gene54155:CDS 40.0%
! ATCTGTGGTGAGTTTTCATG+AGG - chr5.4:61645715-61645734 None:intergenic 40.0%
! ATTGGAGAAGATAGTGGTAG+TGG + chr5.4:61647289-61647308 MS.gene54155:CDS 40.0%
! CAAAAACCTCTACCGACTAA+CGG - chr5.4:61646518-61646537 None:intergenic 40.0%
! CACATTCACAGAACCCATTT+TGG - chr5.4:61647206-61647225 None:intergenic 40.0%
! CTTCAAAGCATTCTCAACTC+GGG - chr5.4:61647167-61647186 None:intergenic 40.0%
! GCACAGATCTTTGAGAAGAA+AGG + chr5.4:61647082-61647101 MS.gene54155:CDS 40.0%
! GTGGTGATGAGATTGAGAAA+TGG + chr5.4:61647413-61647432 MS.gene54155:CDS 40.0%
! TCATTGTATCGGTCGATGAA+TGG + chr5.4:61647374-61647393 MS.gene54155:CDS 40.0%
!! AGAAGATAGTGGTAGTGGAA+AGG + chr5.4:61647294-61647313 MS.gene54155:CDS 40.0%
!! AGACAAAAAAGGTACCTGAG+AGG - chr5.4:61646022-61646041 None:intergenic 40.0%
!! CTTCTGGAACTAATGACATG+TGG + chr5.4:61647580-61647599 MS.gene54155:CDS 40.0%
!! GCATCTGAAGCTGAATCTTT+TGG - chr5.4:61647336-61647355 None:intergenic 40.0%
!! TCACATCAAGTTGATGGAAC+AGG + chr5.4:61646889-61646908 MS.gene54155:CDS 40.0%
!! TGGTTGATGAGTTTCACCTA+AGG - chr5.4:61646313-61646332 None:intergenic 40.0%
AGGCATGGGAATGCTTGTTT+GGG + chr5.4:61647835-61647854 MS.gene54155:CDS 45.0%
ATCAAAGGCTTGAGACATGC+GGG - chr5.4:61649298-61649317 None:intergenic 45.0%
ATCGGAGAATTGAGGACGTT+TGG - chr5.4:61649958-61649977 None:intergenic 45.0%
ATGCGTGGTGACTAAGTTCA+TGG + chr5.4:61647657-61647676 MS.gene54155:CDS 45.0%
ATTTGGACTTTGTGGGTGTC+AGG + chr5.4:61647234-61647253 MS.gene54155:CDS 45.0%
CGCAGAGGATTCTGTTAGAT+AGG + chr5.4:61647815-61647834 MS.gene54155:CDS 45.0%
GAATGGCAGACGATAAAGTC+GGG + chr5.4:61647391-61647410 MS.gene54155:CDS 45.0%
GAATTGAGGACGTTTGGAAG+GGG - chr5.4:61649952-61649971 None:intergenic 45.0%
GAGAATTGAGGACGTTTGGA+AGG - chr5.4:61649954-61649973 None:intergenic 45.0%
GCAGTTCTGTGGAATATGTG+TGG + chr5.4:61647618-61647637 MS.gene54155:CDS 45.0%
GTCAGGAAGAGAGTTTCAAG+GGG + chr5.4:61647251-61647270 MS.gene54155:CDS 45.0%
GTCTACATGGGGAAAAGAGT+TGG + chr5.4:61647496-61647515 MS.gene54155:CDS 45.0%
GTGGTGACTAAGTTCATGGT+AGG + chr5.4:61647661-61647680 MS.gene54155:CDS 45.0%
GTGTCAGGAAGAGAGTTTCA+AGG + chr5.4:61647249-61647268 MS.gene54155:CDS 45.0%
GTTCAACTGTGTCTTCATCG+GGG - chr5.4:61645682-61645701 None:intergenic 45.0%
GTTGGAATCGAGAAGCTGAA+AGG + chr5.4:61647514-61647533 MS.gene54155:CDS 45.0%
TAGGCATGGGAATGCTTGTT+TGG + chr5.4:61647834-61647853 MS.gene54155:CDS 45.0%
TGACATGCTAGTAGTTGAGC+AGG + chr5.4:61648995-61649014 MS.gene54155:intron 45.0%
TGAGCTCCACAAAGATCTTC+TGG + chr5.4:61647564-61647583 MS.gene54155:CDS 45.0%
TGGCATGGTAATTTGGGAGA+TGG + chr5.4:61649788-61649807 MS.gene54155:CDS 45.0%
TTAGAAGAAGGAGGAGACTC+AGG - chr5.4:61645893-61645912 None:intergenic 45.0%
TTATCAGGAAGCTGAGTTCC+AGG - chr5.4:61645962-61645981 None:intergenic 45.0%
TTTCTTCCGTTAGTCGGTAG+AGG + chr5.4:61646509-61646528 MS.gene54155:intron 45.0%
! AATTGCGGTTGATGTAGCTG+AGG + chr5.4:61647744-61647763 MS.gene54155:CDS 45.0%
! ATTGCGGTTGATGTAGCTGA+GGG + chr5.4:61647745-61647764 MS.gene54155:CDS 45.0%
! TGATAACCATGGGTTATGCG+TGG + chr5.4:61647642-61647661 MS.gene54155:CDS 45.0%
!! CAAGAGTGTTGGAGAAGCAA+TGG + chr5.4:61647882-61647901 MS.gene54155:CDS 45.0%
!! CAAGTTGATGGAACAGGCAT+TGG + chr5.4:61646895-61646914 MS.gene54155:CDS 45.0%
AACTGTGTCTTCATCGGGGA+TGG - chr5.4:61645678-61645697 None:intergenic 50.0%
ATGGTGAGGTTCAGGCTCAA+GGG + chr5.4:61646966-61646985 MS.gene54155:CDS 50.0%
ATGTCTCTGTCACGCTCTCA+GGG - chr5.4:61649746-61649765 None:intergenic 50.0%
CAAGAGAGTGGTGGTCATGA+TGG + chr5.4:61646947-61646966 MS.gene54155:CDS 50.0%
CCAACTTAGCGTTCTCCTCA+AGG + chr5.4:61648656-61648675 MS.gene54155:intron 50.0%
CCTATCTTCTGGCCAAACTC+CGG - chr5.4:61646229-61646248 None:intergenic 50.0%
CCTTAGACCTGAAGTTCCCA+AGG + chr5.4:61649878-61649897 MS.gene54155:CDS 50.0%
CCTTGAGGAGAACGCTAAGT+TGG - chr5.4:61648659-61648678 None:intergenic 50.0%
CCTTGGGAACTTCAGGTCTA+AGG - chr5.4:61649881-61649900 None:intergenic 50.0%
CGTTTCATGGCCTGCAATGT+CGG + chr5.4:61647024-61647043 MS.gene54155:CDS 50.0%
CTGTGCCCTCTTGCTACAAA+TGG - chr5.4:61647068-61647087 None:intergenic 50.0%
GAGTCAATCTTTGCAGGCAG+TGG - chr5.4:61648161-61648180 None:intergenic 50.0%
GGGAGAGAATTAGGGGAGAT+TGG + chr5.4:61647271-61647290 MS.gene54155:CDS 50.0%
GGGGAGATTGGAGAAGATAG+TGG + chr5.4:61647283-61647302 MS.gene54155:CDS 50.0%
GTAGCAGTTGTGAAGTGAGG+TGG + chr5.4:61648404-61648423 MS.gene54155:intron 50.0%
TAGTCACCACGCATAACCCA+TGG - chr5.4:61647651-61647670 None:intergenic 50.0%
TGCTTCTCCAACACTCTTGC+AGG - chr5.4:61647881-61647900 None:intergenic 50.0%
TTCTGCACTTTCTCCTGTGC+AGG + chr5.4:61649830-61649849 MS.gene54155:CDS 50.0%
TTGGGAGATGGTTAGTGGTG+AGG + chr5.4:61649800-61649819 MS.gene54155:CDS 50.0%
! AGGTTTGGTTGGCAGTCCTT+GGG - chr5.4:61649897-61649916 None:intergenic 50.0%
! TAGGTTTGGTTGGCAGTCCT+TGG - chr5.4:61649898-61649917 None:intergenic 50.0%
! TGGTCATGATGGTGAGGTTC+AGG + chr5.4:61646958-61646977 MS.gene54155:CDS 50.0%
! TTGCGGTTGATGTAGCTGAG+GGG + chr5.4:61647746-61647765 MS.gene54155:CDS 50.0%
!! TTATAGGTGGCTTGCTCCTG+AGG + chr5.4:61647921-61647940 MS.gene54155:CDS 50.0%
ATGGTGGTTGTGGTGCGAGT+TGG - chr5.4:61645659-61645678 None:intergenic 55.0%
CCGGAGTTTGGCCAGAAGAT+AGG + chr5.4:61646226-61646245 MS.gene54155:intron 55.0%
CTTGCAACGCGCTCGTTTCA+TGG + chr5.4:61647011-61647030 MS.gene54155:CDS 55.0%
GATGGTGAGGTTCAGGCTCA+AGG + chr5.4:61646965-61646984 MS.gene54155:CDS 55.0%
GATGTCTCTGTCACGCTCTC+AGG - chr5.4:61649747-61649766 None:intergenic 55.0%
GCACGAACTAGGGTCCTGTT+TGG - chr5.4:61649670-61649689 None:intergenic 55.0%
TCCAACGCAACCGACATTGC+AGG - chr5.4:61647037-61647056 None:intergenic 55.0%
TGGCAGACGATAAAGTCGGG+TGG + chr5.4:61647394-61647413 MS.gene54155:CDS 55.0%
TGGCAGTCCTTGGGAACTTC+AGG - chr5.4:61649888-61649907 None:intergenic 55.0%
TGGCTGCAGCCTTAGAGTGT+TGG + chr5.4:61645633-61645652 MS.gene54155:CDS 55.0%
TGTGTCTTCATCGGGGATGG+TGG - chr5.4:61645675-61645694 None:intergenic 55.0%
! GAGTGGTGGTCATGATGGTG+AGG + chr5.4:61646952-61646971 MS.gene54155:CDS 55.0%
! GCAGTTGGCATTGCTGCTTG+TGG + chr5.4:61649855-61649874 MS.gene54155:CDS 55.0%
! GCGAGTTGGCCAACACTCTA+AGG - chr5.4:61645645-61645664 None:intergenic 55.0%
! GTCACTGCCTGCAAGAGTGT+TGG + chr5.4:61647871-61647890 MS.gene54155:CDS 55.0%
! TTCATCGGGGATGGTGGTTG+TGG - chr5.4:61645669-61645688 None:intergenic 55.0%
ATGCCAACTGCTGCCTGCAC+AGG - chr5.4:61649846-61649865 None:intergenic 60.0%
TCTCCTGTGCAGGCAGCAGT+TGG + chr5.4:61649840-61649859 MS.gene54155:CDS 60.0%
! GCCTGCAATGTCGGTTGCGT+TGG + chr5.4:61647033-61647052 MS.gene54155:CDS 60.0%
! TTTTCCCCGGTCTGCGCACG+AGG - chr5.4:61649386-61649405 None:intergenic 65.0%
CACACCTCGTGCGCAGACCG+GGG + chr5.4:61649379-61649398 MS.gene54155:intron 70.0%
CCACACCTCGTGCGCAGACC+GGG + chr5.4:61649378-61649397 MS.gene54155:intron 70.0%
CCCACACCTCGTGCGCAGAC+CGG + chr5.4:61649377-61649396 MS.gene54155:intron 70.0%
CCGGTCTGCGCACGAGGTGT+GGG - chr5.4:61649380-61649399 None:intergenic 70.0%
CGGTCTGCGCACGAGGTGTG+GGG - chr5.4:61649379-61649398 None:intergenic 70.0%
GGTCTGCGCACGAGGTGTGG+GGG - chr5.4:61649378-61649397 None:intergenic 70.0%
CCCGGTCTGCGCACGAGGTG+TGG - chr5.4:61649381-61649400 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 61645632 61650019 61645632 ID=MS.gene54155
chr5.4 mRNA 61645632 61650019 61645632 ID=MS.gene54155.t1;Parent=MS.gene54155
chr5.4 exon 61645632 61646060 61645632 ID=MS.gene54155.t1.exon1;Parent=MS.gene54155.t1
chr5.4 CDS 61645632 61646060 61645632 ID=cds.MS.gene54155.t1;Parent=MS.gene54155.t1
chr5.4 exon 61646860 61647942 61646860 ID=MS.gene54155.t1.exon2;Parent=MS.gene54155.t1
chr5.4 CDS 61646860 61647942 61646860 ID=cds.MS.gene54155.t1;Parent=MS.gene54155.t1
chr5.4 exon 61649729 61650019 61649729 ID=MS.gene54155.t1.exon3;Parent=MS.gene54155.t1
chr5.4 CDS 61649729 61650019 61649729 ID=cds.MS.gene54155.t1;Parent=MS.gene54155.t1
Gene Sequence

>MS.gene54155

ATGGCTGCAGCCTTAGAGTGTTGGCCAACTCGCACCACAACCACCATCCCCGATGAAGACACAGTTGAACAACAACAAGTCCTCATGAAAACTCACCACAGATCAGAAGCTACTTCTTCTTCTTCTTCTCTTTCTCTTCCTTCCAAAGACTCTTCCATTCTCATCAACAAGAACAAGTTTCACAAACTTGGTCGTAATCTTTCTGATGCAATCACATCTTTCAAAAACACACTCAACCTTAATAATAATAGTAACAATCCTGAGTCTCCTCCTTCTTCTAAGAAACTTGCTTGGGCTTCTGTTCTTCGTAATCTTACTCAACTTTATCCTGGAACTCAGCTTCCTGATAATCTTATCTCCAACATTCGTAATCATTACAATTCTCTTCCTCTCAGGTACCTTTTTTGTCTTCATATCTCTAGTGATTATGTAAAGGAACCAAATTGAATACTAGATTATATGTTCTATTGTTGTTATTGCTATTTTGACTTTTATTTTGATAGAGTAAACAATTGTTTTTGGTCTTGAATGTATCAATTGTTATCACTATAGTTCTTTCTCTTTTTTGGTGTTGACACTCTGAACTCTAATAATCCGGAGTTTGGCCAGAAGATAGGAATAGTCTTGCAAAAAGTTGTTTCACCTAGGAATTGAACTCGGTTTTATTGAAAGATTCGTCCTTAGGTGAAACTCATCAACCACATGAGTTCATTCACTTGGTTGTTATCACTGTAGTTATTGAATGTATATAACTTATAAGTTACAAAAGTGTCTCCGAATGTGTCTTTCTTTAGCGACTTTTGCTCTCAAATGTGTCTTTCCTTAGGTAATTTAGTCTTCGGATGTATCTTTATCTAGTTAATTTGCTTATCGAATGTTTCTTCCGTTAGTCGGTAGAGGTTTTTGTAATTTCAAAACATTGATGGGTTATAGTGGCACTGTCTCACTCATTTAGAGAACAAAAGTATGATTTACTCAATGAAATATGATAAAATTGGGTCATATTGTATCTCATTCTCACTTTTTCTTCCAATATATTTCAAAGAAAGATTGATTTTTTTCAGCATGTGATGTTTGTTAGTGAATGCAACCCTCTAAACTTTATTTCTTTAGCTTAGCATAACAAAAATAAACTAAGGTCATGGTGATTTTATTTGTTTGTTTAAAAAAAATGATTTTTTTTTTATGTTTGTGTTTTTTTGTTTTTTTTGTTTATAGTTATGCACAGGCTGAATTTGATATGAAGGATGTGTTTCTTCACATCAAGTTGATGGAACAGGCATTGGAGAGTGATCAGCCTGCGATTTTGATTCAACAAGAGAGTGGTGGTCATGATGGTGAGGTTCAGGCTCAAGGGTCTGTTTTGAAGCTCAATTTTGCTTGCAACGCGCTCGTTTCATGGCCTGCAATGTCGGTTGCGTTGGATAGTTTCTCCATTTGTAGCAAGAGGGCACAGATCTTTGAGAAGAAAGGTTTCACCTTAGGGGTTGTTCTTCTTGTAGTTAGGTCCGGTCATGAAAAATTGGTCAAAACCCGAGTTGAGAATGCTTTGAAGTTTGCGATAAAGAAGCCCAAAATGGGTTCTGTGAATGTGAAGCTTTCATTTGGACTTTGTGGGTGTCAGGAAGAGAGTTTCAAGGGGAGAGAATTAGGGGAGATTGGAGAAGATAGTGGTAGTGGAAAGGAGTTTGAGAATTCTAGCCAAAAGATTCAGCTTCAGATGCCTTTGCCTACCTCATCTTTCATTGTATCGGTCGATGAATGGCAGACGATAAAGTCGGGTGGTGATGAGATTGAGAAATGGTTGTTGAATGCTGATTATGTTGAGTTTACAGAACAGATTGGACCTAATTCTTATAAAGGGGTCTACATGGGGAAAAGAGTTGGAATCGAGAAGCTGAAAGGGTGTGAAAAAGGAAATGCTTACGAGTTTGAGCTCCACAAAGATCTTCTGGAACTAATGACATGTGGCCATAGAAACATTCTGCAGTTCTGTGGAATATGTGTGGATGATAACCATGGGTTATGCGTGGTGACTAAGTTCATGGTAGGTAAGTCTGTGCACGACTTAATGTTAAAGAACAAGAAGCTTCAGAGTAAGGATATTGTTAGAATTGCGGTTGATGTAGCTGAGGGGATCAAGTTTATGAATGATCATGGTGTTGCATACAGAGATCTTAATACGCAGAGGATTCTGTTAGATAGGCATGGGAATGCTTGTTTGGGAAATATGGGTGTTGTCACTGCCTGCAAGAGTGTTGGAGAAGCAATGGAGTATGAAACTGATGGTTATAGGTGGCTTGCTCCTGAGGTTTGCTTCTATTCATTCCCTTTTTTTTCAAGTTAATAATTGTTGCAAGTATCGAAGATTATGTCGCACAAATATGCGTCCTAGCTATACATAATTGCCTTTAACACATAGACTGTGATGTAGACAACTAGACATGATACAAGTATCAGATACAGTATGTATCGGATACGGTATTTGTGTGACACCATCGAATAATGATTTGACGTGAATTTGTACCACTGCCTGCAAAGATTGACTCATAATGATTTGTATCTAAATCTAAGTATAGGGTGAGAAAATACTAATTCTCTTATGCTCATGGATTTACTATGAGTATGCATTTTCAATCATATGCGCTCTTTGTGTCATATAAGTGTTGTTTAAGGTAATGCACATTAATTAAAAAATGATTAGTTATGTTTTGTTCATAGTACACTAATGTGTTAAGACTAAAATACTCGCATTAATTGGAGTTGCTCAAAGTAGCAGTTGTGAAGTGAGGTGGACTGTTTAATTAAACAAAGGTAGTATTGAAAAGTGTTAATAAGTATTGTCTTGGTATTCTAAAGTGACAAATAGTTTGAGACATACAAACATTTCAAACATGACACTTGTAATGAGACAAAGGAGCGGAACTTTGTATATGCACCCTTATTCTCACTGATTAAAAGCAATAATAAGATCAAATTCTATCAAACATGGGGGAAAAAAATCTGTCTGAGATGTTTATTTAGCCAACTTAGCGTTCTCCTCAAGGAAGTTCAGATCTTTACTAACTTAAGATGTTATAACTAGCTATCTGACACTAAGAAAGTTTCTTAAAAATTTCATTTTAGACCGTATGTGTTCAAGGAAGAATTGCAACTATGTTCTTCTTACTGATTTCCTTTTTTGGTGTTTTCTTCTTCTTATGTAATATGACCAAGTTGTTATGTGAATTTTCTTATTTGTCTTCTCTGTTGCTGTGTTTGTCCTTGTATACACTTACTTTCTAGTTCAAAGAAAAATTCCAGTGCAGTGTTTTGGCTTTATTATCTCTTTTTTATGCTCTTATGGACCAGTACAACATGAAATGACATGCTAGTAGTTGAGCAGGAGAGAAACTTACAGTAACTTTTTTGTCTCAAAAATCGTTGTTTCGATACATTGTATGAGAAGCATCATCAAACTAGCTGACATTTGAAAAAAGTTTGTCACTTGTCCTGACATCATTGTTTGAGCATGCCTAACATATCTTAATAATTTACTTTTTTTGCTTTCCCTTTATAATGCATGCATACCTTTATTTAACCACTAACCACTCGTGTATATCATTATACACTAAGTATGCTTTATGTAATTGTAATTATACCAGAATTAATTTGAAAATGGAGCCCGCATGTCTCAAGCCTTTGATATGGTCTTTTTCACAGTATTATAGTTATTTGTCTTATTGATGAAGATAATCAGAATGCCCCCACACCTCGTGCGCAGACCGGGGAAAAAAACAATCGAACAAAGGTGTTCATTCAAAAGAGAAAAGTGAGAACTTAATAGACAGAGAAAGTACATAAAAAAATTACTCAAGAGTACCAAATAACCATATAGTTTTTGGTTGTTGTGCATAAATAAGCTGGTTTTCATGCTTTATTAACTAGTCTTCGAAGAGACAATGTCCTTACATATCACACAAACACACCAATTCACATGAATGTTGGTGACACTCTTTGGTTTGTATGTTATAAGTGCTTAATTAAGTTGTTTATCCAAACAGGACCCTAGTTCGTGCTAACTCTTTGTCTCCTCTTCCTTTTTTGGTTGAAAACAGATAATTGCAGGAGACCCTGAGAGCGTGACAGAGACATCGATGAGCAATGTTTATAGTTATGGCATGGTAATTTGGGAGATGGTTAGTGGTGAGGCAGCATATTCTGCACTTTCTCCTGTGCAGGCAGCAGTTGGCATTGCTGCTTGTGGCCTTAGACCTGAAGTTCCCAAGGACTGCCAACCAAACCTAAAATACATTATGACAAAATGCTGGAACAACACCCCTTCCAAACGTCCTCAATTCTCCGATATTTTAGCCATATTGCTGCAACCATACAACAAAAATAGGTAA
Protein sequence

>MS.gene54155.t1

MAAALECWPTRTTTTIPDEDTVEQQQVLMKTHHRSEATSSSSSLSLPSKDSSILINKNKFHKLGRNLSDAITSFKNTLNLNNNSNNPESPPSSKKLAWASVLRNLTQLYPGTQLPDNLISNIRNHYNSLPLRYLFCLHISSDYAEFDMKDVFLHIKLMEQALESDQPAILIQQESGGHDGEVQAQGSVLKLNFACNALVSWPAMSVALDSFSICSKRAQIFEKKGFTLGVVLLVVRSGHEKLVKTRVENALKFAIKKPKMGSVNVKLSFGLCGCQEESFKGRELGEIGEDSGSGKEFENSSQKIQLQMPLPTSSFIVSVDEWQTIKSGGDEIEKWLLNADYVEFTEQIGPNSYKGVYMGKRVGIEKLKGCEKGNAYEFELHKDLLELMTCGHRNILQFCGICVDDNHGLCVVTKFMVGKSVHDLMLKNKKLQSKDIVRIAVDVAEGIKFMNDHGVAYRDLNTQRILLDRHGNACLGNMGVVTACKSVGEAMEYETDGYRWLAPEIIAGDPESVTETSMSNVYSYGMVIWEMVSGEAAYSALSPVQAAVGIAACGLRPEVPKDCQPNLKYIMTKCWNNTPSKRPQFSDILAILLQPYNKNR