Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065074.t1 | XP_013470246.1 | 97.1 | 584 | 15 | 1 | 1 | 584 | 1 | 582 | 0.00E+00 | 1091.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065074.t1 | Q9SQZ0 | 73.5 | 573 | 147 | 2 | 6 | 577 | 12 | 580 | 9.0e-240 | 830.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065074.t1 | A0A072VQJ0 | 97.1 | 584 | 15 | 1 | 1 | 584 | 1 | 582 | 0.0e+00 | 1091.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049265 | MS.gene065074 | 0.850062 | 2.17E-60 | -1.69E-46 |
| MS.gene050710 | MS.gene065074 | 0.82664 | 2.43E-54 | -1.69E-46 |
| MS.gene050809 | MS.gene065074 | 0.82156 | 3.78E-53 | -1.69E-46 |
| MS.gene051552 | MS.gene065074 | 0.82526 | 5.16E-54 | -1.69E-46 |
| MS.gene051907 | MS.gene065074 | 0.825068 | 5.73E-54 | -1.69E-46 |
| MS.gene052469 | MS.gene065074 | -0.8091 | 2.24E-50 | -1.69E-46 |
| MS.gene053108 | MS.gene065074 | 0.824333 | 8.54E-54 | -1.69E-46 |
| MS.gene054290 | MS.gene065074 | 0.831978 | 1.23E-55 | -1.69E-46 |
| MS.gene054884 | MS.gene065074 | 0.828659 | 7.95E-55 | -1.69E-46 |
| MS.gene055159 | MS.gene065074 | 0.804729 | 1.88E-49 | -1.69E-46 |
| MS.gene056330 | MS.gene065074 | 0.806432 | 8.25E-50 | -1.69E-46 |
| MS.gene058158 | MS.gene065074 | 0.85897 | 5.71E-63 | -1.69E-46 |
| MS.gene058418 | MS.gene065074 | 0.822391 | 2.43E-53 | -1.69E-46 |
| MS.gene05926 | MS.gene065074 | 0.826506 | 2.61E-54 | -1.69E-46 |
| MS.gene05960 | MS.gene065074 | 0.817162 | 3.80E-52 | -1.69E-46 |
| MS.gene060717 | MS.gene065074 | -0.809033 | 2.31E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene065074 | MS.gene059849 | PPI |
| MS.gene073783 | MS.gene065074 | PPI |
| MS.gene007461 | MS.gene065074 | PPI |
| MS.gene029217 | MS.gene065074 | PPI |
| MS.gene073784 | MS.gene065074 | PPI |
| MS.gene065074 | MS.gene065186 | PPI |
| MS.gene065074 | MS.gene22464 | PPI |
| MS.gene065074 | MS.gene20038 | PPI |
| MS.gene93135 | MS.gene065074 | PPI |
| MS.gene065074 | MS.gene037356 | PPI |
| MS.gene065074 | MS.gene30905 | PPI |
| MS.gene23912 | MS.gene065074 | PPI |
| MS.gene029871 | MS.gene065074 | PPI |
| MS.gene065074 | MS.gene029219 | PPI |
| MS.gene065074 | MS.gene031403 | PPI |
| MS.gene068784 | MS.gene065074 | PPI |
| MS.gene065074 | MS.gene067520 | PPI |
| MS.gene09808 | MS.gene065074 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065074.t1 | MTR_1g111740 | 97.089 | 584 | 15 | 1 | 1 | 584 | 1 | 582 | 0.0 | 1139 |
| MS.gene065074.t1 | MTR_4g099270 | 51.763 | 539 | 243 | 5 | 34 | 565 | 6 | 534 | 1.07e-177 | 514 |
| MS.gene065074.t1 | MTR_8g089360 | 42.539 | 583 | 313 | 5 | 6 | 583 | 16 | 581 | 1.83e-155 | 458 |
| MS.gene065074.t1 | MTR_8g089320 | 42.234 | 573 | 314 | 4 | 6 | 573 | 28 | 588 | 1.90e-155 | 459 |
| MS.gene065074.t1 | MTR_8g089360 | 42.539 | 583 | 313 | 5 | 6 | 583 | 33 | 598 | 3.39e-155 | 458 |
| MS.gene065074.t1 | MTR_2g035430 | 41.594 | 577 | 319 | 5 | 6 | 579 | 28 | 589 | 2.15e-153 | 453 |
| MS.gene065074.t1 | MTR_1g030660 | 41.034 | 580 | 310 | 6 | 6 | 579 | 23 | 576 | 5.87e-151 | 447 |
| MS.gene065074.t1 | MTR_4g099270 | 53.747 | 387 | 172 | 2 | 9 | 394 | 2 | 382 | 3.28e-138 | 407 |
| MS.gene065074.t1 | MTR_4g099270 | 50.231 | 432 | 198 | 5 | 141 | 565 | 1 | 422 | 1.23e-137 | 407 |
| MS.gene065074.t1 | MTR_8g461380 | 39.894 | 564 | 321 | 4 | 7 | 567 | 36 | 584 | 2.47e-134 | 404 |
| MS.gene065074.t1 | MTR_4g099270 | 51.768 | 311 | 143 | 2 | 9 | 318 | 2 | 306 | 4.52e-100 | 306 |
| MS.gene065074.t1 | MTR_8g089340 | 38.116 | 467 | 265 | 6 | 128 | 582 | 2 | 456 | 1.18e-93 | 295 |
| MS.gene065074.t1 | MTR_7g086510 | 37.037 | 405 | 239 | 4 | 37 | 434 | 25 | 420 | 9.01e-76 | 253 |
| MS.gene065074.t1 | MTR_7g086610 | 34.321 | 405 | 256 | 3 | 34 | 434 | 16 | 414 | 3.24e-74 | 248 |
| MS.gene065074.t1 | MTR_6g027630 | 33.976 | 415 | 263 | 4 | 24 | 434 | 18 | 425 | 7.03e-73 | 244 |
| MS.gene065074.t1 | MTR_6g027630 | 33.976 | 415 | 263 | 4 | 24 | 434 | 18 | 425 | 1.52e-72 | 244 |
| MS.gene065074.t1 | MTR_6g027680 | 33.333 | 417 | 261 | 4 | 29 | 434 | 18 | 428 | 2.01e-72 | 243 |
| MS.gene065074.t1 | MTR_6g027650 | 33.333 | 423 | 261 | 6 | 23 | 434 | 6 | 418 | 1.67e-70 | 239 |
| MS.gene065074.t1 | MTR_6g027660 | 32.701 | 422 | 268 | 4 | 24 | 441 | 24 | 433 | 2.79e-70 | 238 |
| MS.gene065074.t1 | MTR_7g007850 | 32.110 | 545 | 314 | 10 | 43 | 561 | 42 | 556 | 1.95e-67 | 229 |
| MS.gene065074.t1 | MTR_7g007850 | 35.309 | 405 | 242 | 7 | 43 | 440 | 42 | 433 | 1.61e-61 | 211 |
| MS.gene065074.t1 | MTR_7g007850 | 35.309 | 405 | 242 | 7 | 43 | 440 | 42 | 433 | 2.82e-61 | 212 |
| MS.gene065074.t1 | MTR_7g007850 | 35.309 | 405 | 242 | 7 | 43 | 440 | 42 | 433 | 8.82e-61 | 212 |
| MS.gene065074.t1 | MTR_6g027630 | 33.043 | 345 | 221 | 3 | 94 | 434 | 2 | 340 | 1.44e-56 | 199 |
| MS.gene065074.t1 | MTR_6g034535 | 36.596 | 235 | 139 | 4 | 346 | 576 | 87 | 315 | 4.67e-41 | 151 |
| MS.gene065074.t1 | MTR_8g089342 | 54.054 | 111 | 51 | 0 | 6 | 116 | 29 | 139 | 3.96e-35 | 129 |
| MS.gene065074.t1 | MTR_6g027670 | 33.333 | 159 | 106 | 0 | 276 | 434 | 1 | 159 | 2.31e-24 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065074.t1 | AT3G10600 | 73.473 | 573 | 147 | 2 | 6 | 577 | 12 | 580 | 0.0 | 840 |
| MS.gene065074.t1 | AT5G04770 | 73.592 | 568 | 149 | 1 | 8 | 574 | 15 | 582 | 0.0 | 835 |
| MS.gene065074.t1 | AT3G10600 | 72.374 | 438 | 116 | 2 | 141 | 577 | 1 | 434 | 0.0 | 649 |
| MS.gene065074.t1 | AT5G04770 | 73.103 | 435 | 116 | 1 | 141 | 574 | 1 | 435 | 0.0 | 627 |
| MS.gene065074.t1 | AT5G04770 | 76.744 | 387 | 89 | 1 | 8 | 393 | 15 | 401 | 0.0 | 591 |
| MS.gene065074.t1 | AT4G21120 | 44.288 | 569 | 303 | 4 | 6 | 572 | 26 | 582 | 6.60e-170 | 496 |
| MS.gene065074.t1 | AT2G34960 | 42.806 | 556 | 295 | 4 | 6 | 554 | 20 | 559 | 3.24e-145 | 431 |
| MS.gene065074.t1 | AT1G17120 | 41.697 | 554 | 301 | 4 | 7 | 554 | 38 | 575 | 6.67e-134 | 403 |
| MS.gene065074.t1 | AT4G21120 | 41.084 | 443 | 247 | 4 | 132 | 572 | 2 | 432 | 2.68e-113 | 345 |
| MS.gene065074.t1 | AT3G03720 | 35.385 | 390 | 242 | 3 | 49 | 434 | 23 | 406 | 5.03e-79 | 261 |
| MS.gene065074.t1 | AT5G36940 | 30.517 | 580 | 334 | 9 | 27 | 547 | 10 | 579 | 1.43e-78 | 260 |
| MS.gene065074.t1 | AT1G58030 | 34.568 | 405 | 248 | 5 | 47 | 444 | 37 | 431 | 8.64e-73 | 245 |
| MS.gene065074.t1 | AT1G05940 | 30.057 | 529 | 336 | 8 | 37 | 547 | 35 | 547 | 6.05e-66 | 225 |
| MS.gene065074.t1 | AT1G05940 | 33.002 | 403 | 253 | 4 | 37 | 432 | 35 | 427 | 1.83e-62 | 214 |
| MS.gene065074.t1 | AT1G05940 | 33.002 | 403 | 253 | 4 | 37 | 432 | 35 | 427 | 4.06e-62 | 214 |
| MS.gene065074.t1 | AT1G05940 | 27.626 | 438 | 285 | 6 | 127 | 547 | 7 | 429 | 6.78e-44 | 162 |
Find 160 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATCATGTTCACCCTTATT+TGG | 0.151182 | 1.2:-82745170 | MS.gene065074:CDS |
| TCCCCATCCGTCGGATTTAA+AGG | 0.223739 | 1.2:+82747687 | None:intergenic |
| CACCATTCTTTATTGTCTTA+TGG | 0.240699 | 1.2:-82747869 | MS.gene065074:CDS |
| AAGCTAGGAAGCCAGAATTT+TGG | 0.247903 | 1.2:-82745050 | MS.gene065074:CDS |
| TTGGTACACATTTCCAAATA+AGG | 0.271960 | 1.2:+82745157 | None:intergenic |
| CATGCTTCTTCCTTACGATA+TGG | 0.316039 | 1.2:-82747833 | MS.gene065074:intron |
| TTGACAGGAGTGGATGTCTT+TGG | 0.316766 | 1.2:+82747526 | None:intergenic |
| CTCCTCGATCTTGTGTCAAT+TGG | 0.334674 | 1.2:-82745309 | MS.gene065074:CDS |
| ATAGCATTTGTGATAGTGAT+AGG | 0.343471 | 1.2:-82748105 | MS.gene065074:CDS |
| AGTGGTACACCCCAAAATTC+TGG | 0.343949 | 1.2:+82745039 | None:intergenic |
| GTTCTATCCTACGCCATTGC+TGG | 0.344585 | 1.2:-82748764 | MS.gene065074:CDS |
| GGGCCATCCTATGTTAGATT+TGG | 0.346447 | 1.2:-82744955 | MS.gene065074:CDS |
| TCGATTTGGTTAAACCCTTT+CGG | 0.357707 | 1.2:+82748500 | None:intergenic |
| TGATGTCAATATTCCAAAAC+TGG | 0.360124 | 1.2:+82747636 | None:intergenic |
| GCTGCTGAAAACGGTGCTTC+AGG | 0.360568 | 1.2:+82747709 | None:intergenic |
| CGACAGCAACCAAGTCGATT+TGG | 0.363725 | 1.2:+82748486 | None:intergenic |
| GAATTTGCGGCGTTTATAAC+CGG | 0.365665 | 1.2:-82748644 | MS.gene065074:CDS |
| AACAATGGCGGAAGAGGTTA+AGG | 0.377344 | 1.2:-82747941 | MS.gene065074:CDS |
| TGGTTTGACTTAGTCGGCTT+TGG | 0.390645 | 1.2:-82748863 | MS.gene065074:CDS |
| TCTACTACACTTTGAAACTT+TGG | 0.394600 | 1.2:+82744797 | None:intergenic |
| TTGGTGTCTCTTCTGCTAAA+TGG | 0.395983 | 1.2:-82748544 | MS.gene065074:CDS |
| AGCTACCTCCGTGTCACATT+CGG | 0.398623 | 1.2:-82748668 | MS.gene065074:CDS |
| GATATTCCTATAGGTGTCTC+TGG | 0.404482 | 1.2:-82747907 | MS.gene065074:CDS |
| TGGTACACATTTCCAAATAA+GGG | 0.409219 | 1.2:+82745158 | None:intergenic |
| CGACGGCTTGGAGATAGTTT+CGG | 0.409977 | 1.2:+82748996 | None:intergenic |
| TGACAGGAGTGGATGTCTTT+GGG | 0.415776 | 1.2:+82747527 | None:intergenic |
| GATGGATTCTCCGGGTTAGC+TGG | 0.426077 | 1.2:+82748048 | None:intergenic |
| GGGGCTGCTGGTGTGTTTAA+CGG | 0.431190 | 1.2:-82748009 | MS.gene065074:CDS |
| GATAGTTGCTATGTTGGGTC+AGG | 0.436181 | 1.2:-82747611 | MS.gene065074:CDS |
| GACTTAGTCGGCTTTGGCAT+CGG | 0.437178 | 1.2:-82748857 | MS.gene065074:CDS |
| GCCGTTGCTAGAAGTTTCAC+TGG | 0.443199 | 1.2:-82748584 | MS.gene065074:CDS |
| ATTTGGAAATGTGTACCAAC+AGG | 0.461426 | 1.2:-82745153 | MS.gene065074:CDS |
| TTAAACCCTTTCGGAAAAGA+AGG | 0.461748 | 1.2:+82748509 | None:intergenic |
| ATCGGCGGGATGGTCGGCGC+TGG | 0.465652 | 1.2:-82748839 | MS.gene065074:CDS |
| GTTCTAATGTGGTCCCTGCT+TGG | 0.465997 | 1.2:-82747564 | MS.gene065074:CDS |
| TCACAGTCGTTATCTGCTAC+AGG | 0.466187 | 1.2:-82748448 | MS.gene065074:intron |
| TTTGGCATCGGCGGGATGGT+CGG | 0.469036 | 1.2:-82748845 | MS.gene065074:CDS |
| GCCGTTGATATGCCGGTCGC+CGG | 0.470599 | 1.2:-82748701 | MS.gene065074:CDS |
| TGTCACATTCGGTGAATTTG+CGG | 0.471941 | 1.2:-82748657 | MS.gene065074:CDS |
| GATTTAAAGGCTGCTGAAAA+CGG | 0.476228 | 1.2:+82747700 | None:intergenic |
| GGATGGGCGTCAAGAGTGAT+AGG | 0.477130 | 1.2:-82747667 | MS.gene065074:CDS |
| GCTCGTTATATGTGTGTCAT+TGG | 0.479966 | 1.2:-82747589 | MS.gene065074:CDS |
| GTCAATTTCAGGGATCTTCA+CGG | 0.482089 | 1.2:-82745364 | MS.gene065074:intron |
| CTCCGTTGGTTTGACTTAGT+CGG | 0.484691 | 1.2:-82748869 | MS.gene065074:CDS |
| ATCATTGATAGTTGCTATGT+TGG | 0.484832 | 1.2:-82747617 | MS.gene065074:CDS |
| GTGGTGAATATGATATTGAC+GGG | 0.485352 | 1.2:-82748144 | MS.gene065074:CDS |
| ATTGAAATTGCTGGTATCCA+TGG | 0.486937 | 1.2:+82745012 | None:intergenic |
| AGAAAAGCAGAGGCGTTGAC+AGG | 0.487531 | 1.2:+82747511 | None:intergenic |
| GCTGGAGTCTTCGTCACCAC+TGG | 0.489218 | 1.2:-82748821 | MS.gene065074:CDS |
| GCTGTTTATTTAAGCTACAT+TGG | 0.489580 | 1.2:-82747979 | MS.gene065074:CDS |
| TCATTGATAGTTGCTATGTT+GGG | 0.491697 | 1.2:-82747616 | MS.gene065074:CDS |
| ACACTTTGAAACTTTGGTCC+AGG | 0.496558 | 1.2:+82744803 | None:intergenic |
| AGGGAGTGTTAGCGACGGCT+TGG | 0.498574 | 1.2:+82748984 | None:intergenic |
| GCTGAAGGAGATGGTTCTCT+TGG | 0.500020 | 1.2:-82744871 | MS.gene065074:CDS |
| ACAGATCCAGAGACACCTAT+AGG | 0.501870 | 1.2:+82747901 | None:intergenic |
| CCAAATAAGGGTGAACATGA+TGG | 0.510084 | 1.2:+82745170 | None:intergenic |
| CGGCGGGGCCAGCGTGAACA+CGG | 0.512818 | 1.2:+82748789 | None:intergenic |
| TGTTTCAACAATGGCGGAAG+AGG | 0.512880 | 1.2:-82747947 | MS.gene065074:CDS |
| GCGTAGGATAGAACAACGGC+GGG | 0.513150 | 1.2:+82748773 | None:intergenic |
| TATAGACGTTATGTGGTGGC+AGG | 0.514317 | 1.2:-82745246 | MS.gene065074:CDS |
| GCCTTTAAATCCGACGGATG+GGG | 0.514364 | 1.2:-82747688 | MS.gene065074:CDS |
| ATTCTGGCTTCCTAGCTTGA+GGG | 0.516360 | 1.2:+82745055 | None:intergenic |
| GGTTCTCTTGGTCAAAAGAA+TGG | 0.516382 | 1.2:-82744859 | MS.gene065074:CDS |
| TGAGTTTGCCGTTGATATGC+CGG | 0.516984 | 1.2:-82748708 | MS.gene065074:CDS |
| TAGTCGGCTTTGGCATCGGC+GGG | 0.518058 | 1.2:-82748853 | MS.gene065074:CDS |
| AGCCTTTAAATCCGACGGAT+GGG | 0.521965 | 1.2:-82747689 | MS.gene065074:CDS |
| GCTGGTATCCATGGCATAAG+TGG | 0.525739 | 1.2:+82745021 | None:intergenic |
| TGCCATAAGACAATAAAGAA+TGG | 0.526475 | 1.2:+82747867 | None:intergenic |
| AAATGAGCCGCGTTCGAGCT+AGG | 0.526955 | 1.2:-82748916 | MS.gene065074:CDS |
| CTAAAAGCACCACCGGCGAC+CGG | 0.528047 | 1.2:+82748689 | None:intergenic |
| AGAAAAGACACTGTTGGCCA+TGG | 0.528954 | 1.2:+82745213 | None:intergenic |
| GTCAAAAGAAAGTGTGGACC+TGG | 0.530721 | 1.2:-82744821 | MS.gene065074:CDS |
| GGTCCCTGCTTGGTTTGCTA+AGG | 0.530992 | 1.2:-82747554 | MS.gene065074:CDS |
| ATTTCACTGTCCCTCAAGCT+AGG | 0.532498 | 1.2:-82745065 | MS.gene065074:CDS |
| AGCCGCGTTCGAGCTAGGTC+CGG | 0.533259 | 1.2:-82748911 | MS.gene065074:CDS |
| CGGCTTTGGCATCGGCGGGA+TGG | 0.534959 | 1.2:-82748849 | MS.gene065074:CDS |
| AATTCTGGCTTCCTAGCTTG+AGG | 0.536324 | 1.2:+82745054 | None:intergenic |
| GCTCATTTCTTCGTAAGAAG+TGG | 0.536802 | 1.2:+82748931 | None:intergenic |
| AAAGACTCCAAATCTAACAT+AGG | 0.536990 | 1.2:+82744948 | None:intergenic |
| AGCTTTGATGCTGAAGGAGA+TGG | 0.537361 | 1.2:-82744880 | MS.gene065074:CDS |
| CAGCGTGAACACGGCTAGCG+TGG | 0.537709 | 1.2:+82748798 | None:intergenic |
| GGCAAACTCAGTGTAACAAA+AGG | 0.543038 | 1.2:+82748721 | None:intergenic |
| ATCCATGATGAGATTTGCAC+CGG | 0.544589 | 1.2:+82748625 | None:intergenic |
| TGGACCTTAGCAAACCAAGC+AGG | 0.546319 | 1.2:+82747550 | None:intergenic |
| CCTATAGGAATATCTTTCAC+AGG | 0.547006 | 1.2:+82747916 | None:intergenic |
| CCAACAGGAGTAGCAAAAGC+AGG | 0.547126 | 1.2:-82745138 | MS.gene065074:CDS |
| TAAATCCGACGGATGGGGAT+GGG | 0.548572 | 1.2:-82747683 | MS.gene065074:CDS |
| CACGCTAGCCGTGTTCACGC+TGG | 0.553035 | 1.2:-82748797 | MS.gene065074:CDS |
| AGTGGTGAATATGATATTGA+CGG | 0.558637 | 1.2:-82748145 | MS.gene065074:CDS |
| GCCACGACGAGCGAAGCGAG+AGG | 0.558835 | 1.2:+82748964 | None:intergenic |
| CCTGTGAAAGATATTCCTAT+AGG | 0.559643 | 1.2:-82747916 | MS.gene065074:CDS |
| GGGGTGTACCACTTATGCCA+TGG | 0.560946 | 1.2:-82745029 | MS.gene065074:CDS |
| CCACGACGAGCGAAGCGAGA+GGG | 0.564904 | 1.2:+82748965 | None:intergenic |
| GCGTCAAGAGTGATAGGAGT+GGG | 0.564953 | 1.2:-82747661 | MS.gene065074:CDS |
| CAGCCTTTAAATCCGACGGA+TGG | 0.565873 | 1.2:-82747690 | MS.gene065074:CDS |
| ATAGTTTCGGAGGCTCGAAA+AGG | 0.567837 | 1.2:+82749009 | None:intergenic |
| AACCGGTGCAAATCTCATCA+TGG | 0.569909 | 1.2:-82748627 | MS.gene065074:CDS |
| TTAGTCGGCTTTGGCATCGG+CGG | 0.571900 | 1.2:-82748854 | MS.gene065074:CDS |
| TTAAATCCGACGGATGGGGA+TGG | 0.573808 | 1.2:-82747684 | MS.gene065074:CDS |
| GGTGAACATGATGGAAGTGA+AGG | 0.574843 | 1.2:+82745179 | None:intergenic |
| GCGCACGCAATGACAAGCCA+TGG | 0.574924 | 1.2:-82749037 | None:intergenic |
| ACCGGCGACCGGCATATCAA+CGG | 0.575460 | 1.2:+82748700 | None:intergenic |
| ACTCCAAATCTAACATAGGA+TGG | 0.575981 | 1.2:+82744952 | None:intergenic |
| AGCAGAGGCGTTGACAGGAG+TGG | 0.576856 | 1.2:+82747516 | None:intergenic |
| AGGGTTTAACCAAATCGACT+TGG | 0.576967 | 1.2:-82748495 | MS.gene065074:CDS |
| GCATGCGCAAAACCCTCCGT+TGG | 0.579109 | 1.2:-82748883 | MS.gene065074:CDS |
| CATGCTAGCTTTGATGCTGA+AGG | 0.581379 | 1.2:-82744886 | MS.gene065074:CDS |
| CAGTACGAGGGAAAGTTCAG+TGG | 0.581543 | 1.2:-82748163 | MS.gene065074:CDS |
| CCCTCTCGCTTCGCTCGTCG+TGG | 0.582120 | 1.2:-82748965 | MS.gene065074:CDS |
| TCAGCAGCCTTTAAATCCGA+CGG | 0.587420 | 1.2:-82747694 | MS.gene065074:CDS |
| TGGAAGTGAAGGAAAATGAG+AGG | 0.588344 | 1.2:+82745190 | None:intergenic |
| TTCTTCGTAAGAAGTGGAGA+CGG | 0.595190 | 1.2:+82748937 | None:intergenic |
| GCTAACCCGGAGAATCCATC+CGG | 0.602121 | 1.2:-82748045 | MS.gene065074:CDS |
| GGGTACGTCGGCACTACAGT+TGG | 0.605215 | 1.2:-82748563 | MS.gene065074:CDS |
| GTGTCTCTTCTGCTAAATGG+AGG | 0.605370 | 1.2:-82748541 | MS.gene065074:CDS |
| GGCTCGAAAAGGATGAGCCA+TGG | 0.609855 | 1.2:+82749020 | None:intergenic |
| GAGAGCGCAGAAACCAGCAA+TGG | 0.612563 | 1.2:+82748751 | None:intergenic |
| TGTGGAGTCAAAAGAAAGTG+TGG | 0.613439 | 1.2:-82744827 | MS.gene065074:CDS |
| CCCAGTGAAACTTCTAGCAA+CGG | 0.614618 | 1.2:+82748583 | None:intergenic |
| GAGGTAGCTAAAAGCACCAC+CGG | 0.615563 | 1.2:+82748682 | None:intergenic |
| CCGTTGCTAGAAGTTTCACT+GGG | 0.617302 | 1.2:-82748583 | MS.gene065074:CDS |
| GAGAGGAGAAAAGACACTGT+TGG | 0.618575 | 1.2:+82745207 | None:intergenic |
| CAAATTCACCGAATGTGACA+CGG | 0.619866 | 1.2:+82748660 | None:intergenic |
| TTATGATGCTGTTTCAACAA+TGG | 0.625161 | 1.2:-82747956 | MS.gene065074:CDS |
| GGACCTTAGCAAACCAAGCA+GGG | 0.625965 | 1.2:+82747551 | None:intergenic |
| CAGGAGTGGATGTCTTTGGG+TGG | 0.626322 | 1.2:+82747530 | None:intergenic |
| TGGCAGGGACAACAAATCCA+TGG | 0.628251 | 1.2:-82745230 | MS.gene065074:CDS |
| TGACGCCCATCCCCATCCGT+CGG | 0.629798 | 1.2:+82747678 | None:intergenic |
| CGGCTTGGAGATAGTTTCGG+AGG | 0.630657 | 1.2:+82748999 | None:intergenic |
| GTTGATATGCCGGTCGCCGG+TGG | 0.632220 | 1.2:-82748698 | MS.gene065074:CDS |
| GCAGAAACCAGCAATGGCGT+AGG | 0.632234 | 1.2:+82748757 | None:intergenic |
| CAGTGTAACAAAAGGCAGAG+AGG | 0.634699 | 1.2:+82748729 | None:intergenic |
| AACACGGCTAGCGTGGCCAG+TGG | 0.636525 | 1.2:+82748805 | None:intergenic |
| TGATGCTGTTTCAACAATGG+CGG | 0.639365 | 1.2:-82747953 | MS.gene065074:CDS |
| GTCAAGAGTGATAGGAGTGG+GGG | 0.641912 | 1.2:-82747659 | MS.gene065074:CDS |
| CGTCAAGAGTGATAGGAGTG+GGG | 0.646512 | 1.2:-82747660 | MS.gene065074:CDS |
| ATAGACGTTATGTGGTGGCA+GGG | 0.647970 | 1.2:-82745245 | MS.gene065074:CDS |
| TGTGGTCTATAGACGTTATG+TGG | 0.651018 | 1.2:-82745253 | MS.gene065074:CDS |
| CAACAGGAGTAGCAAAAGCA+GGG | 0.652435 | 1.2:-82745137 | MS.gene065074:CDS |
| TGTCATTGGACGTTCTAATG+TGG | 0.654710 | 1.2:-82747575 | MS.gene065074:CDS |
| TGCCAATTGACACAAGATCG+AGG | 0.656869 | 1.2:+82745307 | None:intergenic |
| GCAGGGATGTTAAGTGCTTG+TGG | 0.657911 | 1.2:-82745120 | MS.gene065074:CDS |
| TTACATGGTGGCAAATGCTG+TGG | 0.657960 | 1.2:-82745271 | MS.gene065074:CDS |
| GAACATACCAAGAAAAGCAG+AGG | 0.660727 | 1.2:+82747501 | None:intergenic |
| TACCGGACCTAGCTCGAACG+CGG | 0.677641 | 1.2:+82748909 | None:intergenic |
| GGCGTAGGATAGAACAACGG+CGG | 0.680302 | 1.2:+82748772 | None:intergenic |
| GACTAAGTCAAACCAACGGA+GGG | 0.681694 | 1.2:+82748871 | None:intergenic |
| AGAAGTTTCACTGGGTACGT+CGG | 0.682141 | 1.2:-82748575 | MS.gene065074:CDS |
| CGACTAAGTCAAACCAACGG+AGG | 0.687784 | 1.2:+82748870 | None:intergenic |
| AGCCGACTAAGTCAAACCAA+CGG | 0.693472 | 1.2:+82748867 | None:intergenic |
| AAAGAATGGTGAAATCCATG+TGG | 0.695461 | 1.2:-82744845 | MS.gene065074:CDS |
| GCGAGAGGGAGTGTTAGCGA+CGG | 0.700749 | 1.2:+82748979 | None:intergenic |
| GGCGTCAAGAGTGATAGGAG+TGG | 0.702575 | 1.2:-82747662 | MS.gene065074:CDS |
| AGTGAAACTTCTAGCAACGG+CGG | 0.717474 | 1.2:+82748586 | None:intergenic |
| AACACACCAGCAGCCCCGTG+CGG | 0.719233 | 1.2:+82748015 | None:intergenic |
| GGTCTATAGACGTTATGTGG+TGG | 0.743313 | 1.2:-82745250 | MS.gene065074:CDS |
| CGTAGGATAGAACAACGGCG+GGG | 0.759650 | 1.2:+82748774 | None:intergenic |
| ATTCACCGAATGTGACACGG+AGG | 0.793524 | 1.2:+82748663 | None:intergenic |
| AATGGCGTAGGATAGAACAA+CGG | 0.799373 | 1.2:+82748769 | None:intergenic |
| TGGTGAATATGATATTGACG+GGG | 0.822661 | 1.2:-82748143 | MS.gene065074:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTATTATATTCAACATA+AGG | + | chr1.2:82748060-82748079 | None:intergenic | 10.0% |
| !! | AATTATTATATTCAACATAA+GGG | + | chr1.2:82748059-82748078 | None:intergenic | 10.0% |
| !! | ATAAAAATAATTCTATACTA+AGG | + | chr1.2:82747807-82747826 | None:intergenic | 10.0% |
| !!! | TAGTATAGAATTATTTTTAT+TGG | - | chr1.2:82747807-82747826 | MS.gene065074:intron | 10.0% |
| !! | AACCTTATATTAAAATTAAG+AGG | + | chr1.2:82747187-82747206 | None:intergenic | 15.0% |
| !! | ATGTAATGTATTATTATGTA+TGG | - | chr1.2:82746057-82746076 | MS.gene065074:intron | 15.0% |
| !! | TGTAATGTATTATTATGTAT+GGG | - | chr1.2:82746058-82746077 | MS.gene065074:intron | 15.0% |
| !!! | ATTTAGCATTATTTTTGTTT+TGG | - | chr1.2:82746970-82746989 | MS.gene065074:intron | 15.0% |
| !!! | ATTTTGCTCATTATTTAATA+AGG | - | chr1.2:82746537-82746556 | MS.gene065074:intron | 15.0% |
| !!! | TTCCTCTTAATTTTAATATA+AGG | - | chr1.2:82747182-82747201 | MS.gene065074:intron | 15.0% |
| !!! | TTTTGCTCATTATTTAATAA+GGG | - | chr1.2:82746538-82746557 | MS.gene065074:intron | 15.0% |
| !! | AGGCATAACAAAATATTTAA+CGG | + | chr1.2:82746742-82746761 | None:intergenic | 20.0% |
| !! | GTAATGTATTATTATGTATG+GGG | - | chr1.2:82746059-82746078 | MS.gene065074:intron | 20.0% |
| !! | TAATGTATTATTATGTATGG+GGG | - | chr1.2:82746060-82746079 | MS.gene065074:intron | 20.0% |
| !! | TTATAGCTTCAACAAAATTA+GGG | - | chr1.2:82747533-82747552 | MS.gene065074:CDS | 20.0% |
| !! | TTCAAAAATATTGAAATTGC+TGG | + | chr1.2:82748829-82748848 | None:intergenic | 20.0% |
| !! | TTCTTTAGTAGTCATAATAA+TGG | + | chr1.2:82746858-82746877 | None:intergenic | 20.0% |
| !! | TTTATAGCTTCAACAAAATT+AGG | - | chr1.2:82747532-82747551 | MS.gene065074:CDS | 20.0% |
| !!! | AGTGAAAGAATGAAAATTTT+TGG | + | chr1.2:82746635-82746654 | None:intergenic | 20.0% |
| !!! | ATGACATTAATTTGCTTTTT+AGG | - | chr1.2:82748409-82748428 | MS.gene065074:intron | 20.0% |
| !!! | ATTTTCTTTTTCAACTCAAT+AGG | - | chr1.2:82748097-82748116 | MS.gene065074:CDS | 20.0% |
| !!! | ATTTTTGAATTTGTTTTTGC+TGG | - | chr1.2:82748840-82748859 | MS.gene065074:CDS | 20.0% |
| !!! | TAGTGTATTTTGTATTACTA+TGG | - | chr1.2:82747909-82747928 | MS.gene065074:CDS | 20.0% |
| !!! | TGACATTAATTTGCTTTTTA+GGG | - | chr1.2:82748410-82748429 | MS.gene065074:intron | 20.0% |
| !!! | TTGAGTTGAAAAAGAAAATA+AGG | + | chr1.2:82748096-82748115 | None:intergenic | 20.0% |
| !!! | TTTTGATAGAGATTTAGTAT+TGG | - | chr1.2:82747633-82747652 | MS.gene065074:CDS | 20.0% |
| !!! | TTTTTGAATTTGTTTTTGCT+GGG | - | chr1.2:82748841-82748860 | MS.gene065074:CDS | 20.0% |
| ! | AAAAAGTTATCATTCCCATA+TGG | - | chr1.2:82747871-82747890 | MS.gene065074:CDS | 25.0% |
| ! | AAAAGTTATCATTCCCATAT+GGG | - | chr1.2:82747872-82747891 | MS.gene065074:CDS | 25.0% |
| ! | AACCTAGACAAAATACTTAA+AGG | + | chr1.2:82746830-82746849 | None:intergenic | 25.0% |
| ! | ATGGTAATTGAAAATTTGTC+TGG | - | chr1.2:82746015-82746034 | MS.gene065074:intron | 25.0% |
| ! | CATCTAACTAATATTATGAG+TGG | - | chr1.2:82748373-82748392 | MS.gene065074:intron | 25.0% |
| ! | CTTCTGATTAGATAAATGTA+AGG | - | chr1.2:82747962-82747981 | MS.gene065074:CDS | 25.0% |
| ! | TACTAAATCTCTATCAAAAG+AGG | + | chr1.2:82747632-82747651 | None:intergenic | 25.0% |
| ! | TTAACCTTTACCAAAAAAAG+TGG | - | chr1.2:82747703-82747722 | MS.gene065074:CDS | 25.0% |
| !! | ATTTTTATTGGAAGTGAAAC+TGG | - | chr1.2:82747819-82747838 | MS.gene065074:intron | 25.0% |
| !! | TTCCTTTAAGTATTTTGTCT+AGG | - | chr1.2:82746825-82746844 | MS.gene065074:intron | 25.0% |
| !! | TTTTCAATTACCATATCGTA+AGG | + | chr1.2:82746009-82746028 | None:intergenic | 25.0% |
| !! | TTTTTATTGGAAGTGAAACT+GGG | - | chr1.2:82747820-82747839 | MS.gene065074:intron | 25.0% |
| !!! | AATGAAAATTTTTGGCCTTT+TGG | + | chr1.2:82746627-82746646 | None:intergenic | 25.0% |
| !!! | ATGAAAATTTTTGGCCTTTT+GGG | + | chr1.2:82746626-82746645 | None:intergenic | 25.0% |
| !!! | TAAATATACCACTTTTCACA+TGG | - | chr1.2:82747758-82747777 | MS.gene065074:intron | 25.0% |
| !!! | TTTTGATAGTACAATGTAAG+AGG | + | chr1.2:82748344-82748363 | None:intergenic | 25.0% |
| !!! | TTTTGGGTATTTATAGAACT+GGG | + | chr1.2:82746610-82746629 | None:intergenic | 25.0% |
| AAAATCGCAATCAAAATCGA+AGG | + | chr1.2:82747001-82747020 | None:intergenic | 30.0% | |
| AAAGACTCCAAATCTAACAT+AGG | + | chr1.2:82748884-82748903 | None:intergenic | 30.0% | |
| AAATAATAGACCATTTCAGG+TGG | - | chr1.2:82748121-82748140 | MS.gene065074:CDS | 30.0% | |
| AATACTTGATCAAGTGAGTA+AGG | + | chr1.2:82746786-82746805 | None:intergenic | 30.0% | |
| AGTAAGGCTATTAAGTTTCA+AGG | + | chr1.2:82746770-82746789 | None:intergenic | 30.0% | |
| AGTGGTGAATATGATATTGA+CGG | - | chr1.2:82745684-82745703 | MS.gene065074:intron | 30.0% | |
| ATATGTTTACAAGATTACGC+TGG | + | chr1.2:82747561-82747580 | None:intergenic | 30.0% | |
| ATGTAAGGACAAAGACAATT+AGG | - | chr1.2:82747977-82747996 | MS.gene065074:CDS | 30.0% | |
| ATTGGTTAATCCCTTTCTTT+AGG | - | chr1.2:82747651-82747670 | MS.gene065074:CDS | 30.0% | |
| CACCATTCTTTATTGTCTTA+TGG | - | chr1.2:82745960-82745979 | MS.gene065074:intron | 30.0% | |
| CAGTTCTATAAATACCCAAA+AGG | - | chr1.2:82746609-82746628 | MS.gene065074:intron | 30.0% | |
| CATGTACATAAATGACTCAA+AGG | + | chr1.2:82746894-82746913 | None:intergenic | 30.0% | |
| CTATCAAAATCGCACAAAAT+CGG | - | chr1.2:82746462-82746481 | MS.gene065074:intron | 30.0% | |
| CTCTTGATTAGAATCATTGA+CGG | - | chr1.2:82748211-82748230 | MS.gene065074:intron | 30.0% | |
| GATTTGTGTATTTATTCTGC+TGG | - | chr1.2:82747369-82747388 | MS.gene065074:intron | 30.0% | |
| GCTGTTTATTTAAGCTACAT+TGG | - | chr1.2:82745850-82745869 | MS.gene065074:intron | 30.0% | |
| GGAAAATAATAGACCATTTC+AGG | - | chr1.2:82748118-82748137 | MS.gene065074:CDS | 30.0% | |
| GTTTCCTCATTAATGTGAAT+GGG | - | chr1.2:82747410-82747429 | MS.gene065074:intron | 30.0% | |
| TAAAATCGCAATCAAAATCG+AGG | + | chr1.2:82747002-82747021 | None:intergenic | 30.0% | |
| TATTAAGTTTCAAGGCAAAG+AGG | + | chr1.2:82746762-82746781 | None:intergenic | 30.0% | |
| TCGATATAGGATAGTAAAGT+CGG | + | chr1.2:82747031-82747050 | None:intergenic | 30.0% | |
| TGAAATCCAATACATGATTG+AGG | + | chr1.2:82748280-82748299 | None:intergenic | 30.0% | |
| TGATGTCAATATTCCAAAAC+TGG | + | chr1.2:82746196-82746215 | None:intergenic | 30.0% | |
| TGCCATAAGACAATAAAGAA+TGG | + | chr1.2:82745965-82745984 | None:intergenic | 30.0% | |
| TGGAACAAGGTTATCAAAAT+CGG | + | chr1.2:82747146-82747165 | None:intergenic | 30.0% | |
| TGGTACACATTTCCAAATAA+GGG | + | chr1.2:82748674-82748693 | None:intergenic | 30.0% | |
| TGTTTCCTCATTAATGTGAA+TGG | - | chr1.2:82747409-82747428 | MS.gene065074:intron | 30.0% | |
| TTGGTACACATTTCCAAATA+AGG | + | chr1.2:82748675-82748694 | None:intergenic | 30.0% | |
| ! | AAATCGAAGGATTTTACTCA+AGG | + | chr1.2:82747066-82747085 | None:intergenic | 30.0% |
| ! | AAGTATTTTGTCAGGCATTT+AGG | - | chr1.2:82746799-82746818 | MS.gene065074:intron | 30.0% |
| ! | ACTCTTTGTATTTTACATGG+TGG | - | chr1.2:82748546-82748565 | MS.gene065074:CDS | 30.0% |
| ! | ACTTGATCAAGTATTTTGTC+AGG | - | chr1.2:82746791-82746810 | MS.gene065074:intron | 30.0% |
| ! | ATAGCATTTGTGATAGTGAT+AGG | - | chr1.2:82745724-82745743 | MS.gene065074:intron | 30.0% |
| ! | ATAGGATTTTGCTTGTGTTT+GGG | + | chr1.2:82746446-82746465 | None:intergenic | 30.0% |
| ! | ATCATTGATAGTTGCTATGT+TGG | - | chr1.2:82746212-82746231 | MS.gene065074:intron | 30.0% |
| ! | CACACTCTTTGTATTTTACA+TGG | - | chr1.2:82748543-82748562 | MS.gene065074:CDS | 30.0% |
| ! | TCATTGATAGTTGCTATGTT+GGG | - | chr1.2:82746213-82746232 | MS.gene065074:intron | 30.0% |
| ! | TGATGTTAGTGTTTTCTGAA+TGG | - | chr1.2:82747275-82747294 | MS.gene065074:intron | 30.0% |
| !! | ATAGTGATAGGTTTTTGGAA+AGG | - | chr1.2:82745736-82745755 | MS.gene065074:intron | 30.0% |
| !! | CGTTTTTGATAACAATGCAT+TGG | + | chr1.2:82746353-82746372 | None:intergenic | 30.0% |
| !! | CTTTTGGGTATTTATAGAAC+TGG | + | chr1.2:82746611-82746630 | None:intergenic | 30.0% |
| !! | TAGTGATAGGTTTTTGGAAA+GGG | - | chr1.2:82745737-82745756 | MS.gene065074:intron | 30.0% |
| !! | TGTTCAATTTTTCAGTACGA+GGG | - | chr1.2:82745654-82745673 | MS.gene065074:intron | 30.0% |
| !! | TTATGATGCTGTTTCAACAA+TGG | - | chr1.2:82745873-82745892 | MS.gene065074:intron | 30.0% |
| !! | TTGCTGTGTTTTTAATTCCT+TGG | - | chr1.2:82747234-82747253 | MS.gene065074:intron | 30.0% |
| !! | TTGTGATAGTGATAGGTTTT+TGG | - | chr1.2:82745731-82745750 | MS.gene065074:intron | 30.0% |
| !! | TTGTTCAATTTTTCAGTACG+AGG | - | chr1.2:82745653-82745672 | MS.gene065074:intron | 30.0% |
| !!! | ACTTAAAAGCACTTCTCTTT+TGG | + | chr1.2:82747729-82747748 | None:intergenic | 30.0% |
| !!! | AGGATTTTGATGGATTTTGA+AGG | - | chr1.2:82746514-82746533 | MS.gene065074:intron | 30.0% |
| !!! | GACTTTTCTAGAATCGATAT+AGG | + | chr1.2:82747044-82747063 | None:intergenic | 30.0% |
| AAAACATGTGACACCCATAT+GGG | + | chr1.2:82747888-82747907 | None:intergenic | 35.0% | |
| AAAGAATGGTGAAATCCATG+TGG | - | chr1.2:82748984-82749003 | MS.gene065074:CDS | 35.0% | |
| ACAATCATCCATGTGAAAAG+TGG | + | chr1.2:82747769-82747788 | None:intergenic | 35.0% | |
| ACAATCCTTCACAAAGGAAA+GGG | - | chr1.2:82747303-82747322 | MS.gene065074:intron | 35.0% | |
| ACACTTCCTCAATAGTTACA+CGG | - | chr1.2:82746661-82746680 | MS.gene065074:intron | 35.0% | |
| ACCAAAGTTTCAAAGTGTAG+GGG | - | chr1.2:82749031-82749050 | MS.gene065074:CDS | 35.0% | |
| ACCACTATATAGGTAGATTG+AGG | - | chr1.2:82747678-82747697 | MS.gene065074:CDS | 35.0% | |
| ACTCCAAATCTAACATAGGA+TGG | + | chr1.2:82748880-82748899 | None:intergenic | 35.0% | |
| ACTGAGTTCATCGTTTACAA+TGG | - | chr1.2:82745580-82745599 | MS.gene065074:intron | 35.0% | |
| AGAGGCTATATTGTTGAAGT+GGG | + | chr1.2:82747330-82747349 | None:intergenic | 35.0% | |
| ATAGTAGTATTTACCGAGGT+GGG | + | chr1.2:82747942-82747961 | None:intergenic | 35.0% | |
| ATCAACTCATCCAATAGTGA+AGG | + | chr1.2:82748185-82748204 | None:intergenic | 35.0% | |
| ATTGAAATTGCTGGTATCCA+TGG | + | chr1.2:82748820-82748839 | None:intergenic | 35.0% | |
| ATTTGGAAATGTGTACCAAC+AGG | - | chr1.2:82748676-82748695 | MS.gene065074:CDS | 35.0% | |
| CACGGGATTGTTCATATAAT+TGG | - | chr1.2:82746679-82746698 | MS.gene065074:intron | 35.0% | |
| CCTATAGGAATATCTTTCAC+AGG | + | chr1.2:82745916-82745935 | None:intergenic | 35.0% | |
| CCTGAAATTGACATTATGTG+CGG | + | chr1.2:82748457-82748476 | None:intergenic | 35.0% | |
| CCTGTGAAAGATATTCCTAT+AGG | - | chr1.2:82745913-82745932 | MS.gene065074:intron | 35.0% | |
| CGATATAGGATAGTAAAGTC+GGG | + | chr1.2:82747030-82747049 | None:intergenic | 35.0% | |
| CGCACATAATGTCAATTTCA+GGG | - | chr1.2:82748455-82748474 | MS.gene065074:CDS | 35.0% | |
| CGTCAATGATTCTAATCAAG+AGG | + | chr1.2:82748213-82748232 | None:intergenic | 35.0% | |
| GAAGATAGTAGTATTTACCG+AGG | + | chr1.2:82747946-82747965 | None:intergenic | 35.0% | |
| GACCAAAGTTTCAAAGTGTA+GGG | - | chr1.2:82749030-82749049 | MS.gene065074:CDS | 35.0% | |
| GACTTTACTTCAAGTCGAAT+GGG | + | chr1.2:82747123-82747142 | None:intergenic | 35.0% | |
| GATTTAAAGGCTGCTGAAAA+CGG | + | chr1.2:82746132-82746151 | None:intergenic | 35.0% | |
| GCAAAAGATACACACTCAAT+CGG | + | chr1.2:82747475-82747494 | None:intergenic | 35.0% | |
| GGAACAAGGTTATCAAAATC+GGG | + | chr1.2:82747145-82747164 | None:intergenic | 35.0% | |
| GTATTCACAATCCTTCACAA+AGG | - | chr1.2:82747297-82747316 | MS.gene065074:intron | 35.0% | |
| GTATTTATAGAACTGGGTCA+TGG | + | chr1.2:82746604-82746623 | None:intergenic | 35.0% | |
| GTGGTGAATATGATATTGAC+GGG | - | chr1.2:82745685-82745704 | MS.gene065074:intron | 35.0% | |
| TCATAATGAAGGTGACAATG+TGG | + | chr1.2:82747450-82747469 | None:intergenic | 35.0% | |
| TGAACCCATTCACATTAATG+AGG | + | chr1.2:82747417-82747436 | None:intergenic | 35.0% | |
| TGATTCCATACCTTCACTAT+TGG | - | chr1.2:82748172-82748191 | MS.gene065074:intron | 35.0% | |
| TGGTGAATATGATATTGACG+GGG | - | chr1.2:82745686-82745705 | MS.gene065074:intron | 35.0% | |
| TTAAACCCTTTCGGAAAAGA+AGG | + | chr1.2:82745323-82745342 | None:intergenic | 35.0% | |
| TTGCTAAAGTCTCATGATTC+CGG | + | chr1.2:82747503-82747522 | None:intergenic | 35.0% | |
| TTTAGGCTCAACCACTATAT+AGG | - | chr1.2:82747668-82747687 | MS.gene065074:CDS | 35.0% | |
| ! | AGAATTGTCTAGGATAAGTC+TGG | + | chr1.2:82747585-82747604 | None:intergenic | 35.0% |
| ! | ATAAGGGTCAATTTTTGACC+TGG | - | chr1.2:82746554-82746573 | MS.gene065074:intron | 35.0% |
| ! | CAAAATCCTGCGATTTTGAA+CGG | + | chr1.2:82746503-82746522 | None:intergenic | 35.0% |
| ! | GATAGGATTTTGCTTGTGTT+TGG | + | chr1.2:82746447-82746466 | None:intergenic | 35.0% |
| ! | TCAAAATCGCAGGATTTTGA+TGG | - | chr1.2:82746504-82746523 | MS.gene065074:intron | 35.0% |
| ! | TGTAACTATTGAGGAAGTGT+GGG | + | chr1.2:82746661-82746680 | None:intergenic | 35.0% |
| !! | ATCAAAAGAGGTACCACATT+TGG | + | chr1.2:82747620-82747639 | None:intergenic | 35.0% |
| !! | CGATTTTGTGCGATTTTGAT+AGG | + | chr1.2:82746464-82746483 | None:intergenic | 35.0% |
| !! | TCGATTTGGTTAAACCCTTT+CGG | + | chr1.2:82745332-82745351 | None:intergenic | 35.0% |
| !!! | TCTCTTTTGGCCACTTTTTT+TGG | + | chr1.2:82747716-82747735 | None:intergenic | 35.0% |
| !!! | TTGGCCACTTTTTTTGGTAA+AGG | + | chr1.2:82747710-82747729 | None:intergenic | 35.0% |
| AATGGCGTAGGATAGAACAA+CGG | + | chr1.2:82745063-82745082 | None:intergenic | 40.0% | |
| ACAATCCCGTGTAACTATTG+AGG | + | chr1.2:82746670-82746689 | None:intergenic | 40.0% | |
| ACAGTCACAGACAACATACA+CGG | - | chr1.2:82745444-82745463 | MS.gene065074:intron | 40.0% | |
| ACTGGGTCATGGATTCAAAT+CGG | + | chr1.2:82746593-82746612 | None:intergenic | 40.0% | |
| AGGGTTTAACCAAATCGACT+TGG | - | chr1.2:82745334-82745353 | MS.gene065074:CDS | 40.0% | |
| AGTGGTTGAGCCTAAAGAAA+GGG | + | chr1.2:82747664-82747683 | None:intergenic | 40.0% | |
| ATCCATGATGAGATTTGCAC+CGG | + | chr1.2:82745207-82745226 | None:intergenic | 40.0% | |
| ATCGGGTCAATTTATGAACC+AGG | + | chr1.2:82746575-82746594 | None:intergenic | 40.0% | |
| CAAATTCACCGAATGTGACA+CGG | + | chr1.2:82745172-82745191 | None:intergenic | 40.0% | |
| CACAATCCTTCACAAAGGAA+AGG | - | chr1.2:82747302-82747321 | MS.gene065074:intron | 40.0% | |
| CACTTCAACAATATAGCCTC+TGG | - | chr1.2:82747329-82747348 | MS.gene065074:intron | 40.0% | |
| CACTTCCTCAATAGTTACAC+GGG | - | chr1.2:82746662-82746681 | MS.gene065074:intron | 40.0% | |
| CAGAGGCTATATTGTTGAAG+TGG | + | chr1.2:82747331-82747350 | None:intergenic | 40.0% | |
| CATGCTTCTTCCTTACGATA+TGG | - | chr1.2:82745996-82746015 | MS.gene065074:intron | 40.0% | |
| CCAAATAAGGGTGAACATGA+TGG | + | chr1.2:82748662-82748681 | None:intergenic | 40.0% | |
| CCAATATCTTCCACCTGAAA+TGG | + | chr1.2:82748134-82748153 | None:intergenic | 40.0% | |
| CCATCATGTTCACCCTTATT+TGG | - | chr1.2:82748659-82748678 | MS.gene065074:CDS | 40.0% | |
| CCGCACATAATGTCAATTTC+AGG | - | chr1.2:82748454-82748473 | MS.gene065074:CDS | 40.0% | |
| CGACTTAAGTCTCAAAATCC+TGG | - | chr1.2:82746373-82746392 | MS.gene065074:intron | 40.0% | |
| CTCATCCAATAGTGAAGGTA+TGG | + | chr1.2:82748180-82748199 | None:intergenic | 40.0% | |
| CTGCTACAACAGAATTGTCT+AGG | + | chr1.2:82747595-82747614 | None:intergenic | 40.0% | |
| GAAAACATGTGACACCCATA+TGG | + | chr1.2:82747889-82747908 | None:intergenic | 40.0% | |
| GAACATACCAAGAAAAGCAG+AGG | + | chr1.2:82746331-82746350 | None:intergenic | 40.0% | |
| GAATTTGCGGCGTTTATAAC+CGG | - | chr1.2:82745185-82745204 | MS.gene065074:CDS | 40.0% | |
| GATAGTAGTATTTACCGAGG+TGG | + | chr1.2:82747943-82747962 | None:intergenic | 40.0% | |
| GATATTCCTATAGGTGTCTC+TGG | - | chr1.2:82745922-82745941 | MS.gene065074:intron | 40.0% | |
| GCCTCAATCTACCTATATAG+TGG | + | chr1.2:82747682-82747701 | None:intergenic | 40.0% | |
| GCTCATTTCTTCGTAAGAAG+TGG | + | chr1.2:82744901-82744920 | None:intergenic | 40.0% | |
| GCTCGTTATATGTGTGTCAT+TGG | - | chr1.2:82746240-82746259 | MS.gene065074:intron | 40.0% | |
| GGACCAAAGTTTCAAAGTGT+AGG | - | chr1.2:82749029-82749048 | MS.gene065074:CDS | 40.0% | |
| GGACTTTACTTCAAGTCGAA+TGG | + | chr1.2:82747124-82747143 | None:intergenic | 40.0% | |
| GGCAAACTCAGTGTAACAAA+AGG | + | chr1.2:82745111-82745130 | None:intergenic | 40.0% | |
| GGTTCTCTTGGTCAAAAGAA+TGG | - | chr1.2:82748970-82748989 | MS.gene065074:CDS | 40.0% | |
| GTCAATTTCAGGGATCTTCA+CGG | - | chr1.2:82748465-82748484 | MS.gene065074:CDS | 40.0% | |
| GTGTAACTATTGAGGAAGTG+TGG | + | chr1.2:82746662-82746681 | None:intergenic | 40.0% | |
| TAGTAGTATTTACCGAGGTG+GGG | + | chr1.2:82747941-82747960 | None:intergenic | 40.0% | |
| TAGTGGTTGAGCCTAAAGAA+AGG | + | chr1.2:82747665-82747684 | None:intergenic | 40.0% | |
| TCGAATGGGAGTAGCAAAAT+CGG | + | chr1.2:82747109-82747128 | None:intergenic | 40.0% | |
| TGAAATCCGTTCAAAATCGC+AGG | - | chr1.2:82746494-82746513 | MS.gene065074:intron | 40.0% | |
| TGGAAGTGAAGGAAAATGAG+AGG | + | chr1.2:82748642-82748661 | None:intergenic | 40.0% | |
| TGTCATTGGACGTTCTAATG+TGG | - | chr1.2:82746254-82746273 | MS.gene065074:intron | 40.0% | |
| TGTGGAGTCAAAAGAAAGTG+TGG | - | chr1.2:82749002-82749021 | MS.gene065074:CDS | 40.0% | |
| TGTGGTCTATAGACGTTATG+TGG | - | chr1.2:82748576-82748595 | MS.gene065074:CDS | 40.0% | |
| TTCTTCGTAAGAAGTGGAGA+CGG | + | chr1.2:82744895-82744914 | None:intergenic | 40.0% | |
| TTGTGTAGGCTGCTTAAAGT+TGG | - | chr1.2:82748254-82748273 | MS.gene065074:intron | 40.0% | |
| ! | AAAAAACCGGATGGATTCTC+CGG | + | chr1.2:82745793-82745812 | None:intergenic | 40.0% |
| ! | ACAGTTCCTTCTTTTCCGAA+AGG | - | chr1.2:82745314-82745333 | MS.gene065074:CDS | 40.0% |
| ! | AGTTGGCCTCAATCATGTAT+TGG | - | chr1.2:82748271-82748290 | MS.gene065074:intron | 40.0% |
| ! | ATGACCTTAGCTCTTTGTGT+AGG | - | chr1.2:82748240-82748259 | MS.gene065074:intron | 40.0% |
| ! | ATGTTAAGTGTGTTGCTCTG+TGG | - | chr1.2:82748007-82748026 | MS.gene065074:CDS | 40.0% |
| ! | CAGTTCCTTCTTTTCCGAAA+GGG | - | chr1.2:82745315-82745334 | MS.gene065074:CDS | 40.0% |
| ! | CCATTTCAGGTGGAAGATAT+TGG | - | chr1.2:82748131-82748150 | MS.gene065074:CDS | 40.0% |
| ! | CTCAATCGGCTTCATAATGA+AGG | + | chr1.2:82747461-82747480 | None:intergenic | 40.0% |
| ! | GTAACTATTGAGGAAGTGTG+GGG | + | chr1.2:82746660-82746679 | None:intergenic | 40.0% |
| ! | TAACTATTGAGGAAGTGTGG+GGG | + | chr1.2:82746659-82746678 | None:intergenic | 40.0% |
| ! | TGAGTGTGTATCTTTTGCGT+TGG | - | chr1.2:82747477-82747496 | MS.gene065074:intron | 40.0% |
| ! | TGTCACATTCGGTGAATTTG+CGG | - | chr1.2:82745172-82745191 | MS.gene065074:CDS | 40.0% |
| ! | TTGGTGTCTCTTCTGCTAAA+TGG | - | chr1.2:82745285-82745304 | MS.gene065074:CDS | 40.0% |
| ! | TTGTGTTTGGGACTTTGCTA+TGG | + | chr1.2:82746434-82746453 | None:intergenic | 40.0% |
| ! | TTTTGCTGGGATCACTTGAT+GGG | - | chr1.2:82748854-82748873 | MS.gene065074:CDS | 40.0% |
| ! | TTTTTGCTGGGATCACTTGA+TGG | - | chr1.2:82748853-82748872 | MS.gene065074:CDS | 40.0% |
| !! | ACACTTTGAAACTTTGGTCC+AGG | + | chr1.2:82749029-82749048 | None:intergenic | 40.0% |
| !! | CACTTTCTTTTGACTCCACA+TGG | + | chr1.2:82749002-82749021 | None:intergenic | 40.0% |
| !! | GTGGTGGATATTGATCAAGA+AGG | + | chr1.2:82745419-82745438 | None:intergenic | 40.0% |
| !! | TAGGTTTTTGGAAAGGGAGT+TGG | - | chr1.2:82745743-82745762 | MS.gene065074:intron | 40.0% |
| !! | TGATGCTGTTTCAACAATGG+CGG | - | chr1.2:82745876-82745895 | MS.gene065074:intron | 40.0% |
| AACCGGTGCAAATCTCATCA+TGG | - | chr1.2:82745202-82745221 | MS.gene065074:CDS | 45.0% | |
| AACGATGAACTCAGTAGCAC+CGG | + | chr1.2:82745575-82745594 | None:intergenic | 45.0% | |
| ACAGATCCAGAGACACCTAT+AGG | + | chr1.2:82745931-82745950 | None:intergenic | 45.0% | |
| AGAAAAGACACTGTTGGCCA+TGG | + | chr1.2:82748619-82748638 | None:intergenic | 45.0% | |
| AGAAGTTTCACTGGGTACGT+CGG | - | chr1.2:82745254-82745273 | MS.gene065074:CDS | 45.0% | |
| AGCACAAGCACATTGGAACA+AGG | + | chr1.2:82747159-82747178 | None:intergenic | 45.0% | |
| AGCCGACTAAGTCAAACCAA+CGG | + | chr1.2:82744965-82744984 | None:intergenic | 45.0% | |
| AGCCTTTAAATCCGACGGAT+GGG | - | chr1.2:82746140-82746159 | MS.gene065074:intron | 45.0% | |
| AGTGAAACTTCTAGCAACGG+CGG | + | chr1.2:82745246-82745265 | None:intergenic | 45.0% | |
| ATAGACGTTATGTGGTGGCA+GGG | - | chr1.2:82748584-82748603 | MS.gene065074:CDS | 45.0% | |
| ATAGTTTCGGAGGCTCGAAA+AGG | + | chr1.2:82744823-82744842 | None:intergenic | 45.0% | |
| ATCGGACACACTTTGATCAG+AGG | - | chr1.2:82745547-82745566 | MS.gene065074:intron | 45.0% | |
| ATTTCACTGTCCCTCAAGCT+AGG | - | chr1.2:82748764-82748783 | MS.gene065074:CDS | 45.0% | |
| CAACAGGAGTAGCAAAAGCA+GGG | - | chr1.2:82748692-82748711 | MS.gene065074:CDS | 45.0% | |
| CAGTGTAACAAAAGGCAGAG+AGG | + | chr1.2:82745103-82745122 | None:intergenic | 45.0% | |
| CAGTGTTGTGTCTCAGACAT+CGG | - | chr1.2:82745529-82745548 | MS.gene065074:intron | 45.0% | |
| CCCAGTGAAACTTCTAGCAA+CGG | + | chr1.2:82745249-82745268 | None:intergenic | 45.0% | |
| CCGTTGCTAGAAGTTTCACT+GGG | - | chr1.2:82745246-82745265 | MS.gene065074:CDS | 45.0% | |
| CGAATGGGAGTAGCAAAATC+GGG | + | chr1.2:82747108-82747127 | None:intergenic | 45.0% | |
| CTCCTCGATCTTGTGTCAAT+TGG | - | chr1.2:82748520-82748539 | MS.gene065074:CDS | 45.0% | |
| CTCTGGCTGAGATTTGATCA+GGG | - | chr1.2:82747346-82747365 | MS.gene065074:intron | 45.0% | |
| CTGGGTCATGGATTCAAATC+GGG | + | chr1.2:82746592-82746611 | None:intergenic | 45.0% | |
| GACTAAGTCAAACCAACGGA+GGG | + | chr1.2:82744961-82744980 | None:intergenic | 45.0% | |
| GAGAGGAGAAAAGACACTGT+TGG | + | chr1.2:82748625-82748644 | None:intergenic | 45.0% | |
| GATAGTTGCTATGTTGGGTC+AGG | - | chr1.2:82746218-82746237 | MS.gene065074:intron | 45.0% | |
| GGGCCATCCTATGTTAGATT+TGG | - | chr1.2:82748874-82748893 | MS.gene065074:CDS | 45.0% | |
| GGTCTATAGACGTTATGTGG+TGG | - | chr1.2:82748579-82748598 | MS.gene065074:CDS | 45.0% | |
| GTGTCTCTTCTGCTAAATGG+AGG | - | chr1.2:82745288-82745307 | MS.gene065074:CDS | 45.0% | |
| TAATTCCTTGGCAACGTGTG+TGG | - | chr1.2:82747246-82747265 | MS.gene065074:intron | 45.0% | |
| TACGCAAAGTCGCAAAAACC+AGG | + | chr1.2:82746394-82746413 | None:intergenic | 45.0% | |
| TATAGACGTTATGTGGTGGC+AGG | - | chr1.2:82748583-82748602 | MS.gene065074:CDS | 45.0% | |
| TCACAGTCGTTATCTGCTAC+AGG | - | chr1.2:82745381-82745400 | MS.gene065074:intron | 45.0% | |
| TCAGCAGCCTTTAAATCCGA+CGG | - | chr1.2:82746135-82746154 | MS.gene065074:intron | 45.0% | |
| TCTGGCTGAGATTTGATCAG+GGG | - | chr1.2:82747347-82747366 | MS.gene065074:intron | 45.0% | |
| TGACAGGAGTGGATGTCTTT+GGG | + | chr1.2:82746305-82746324 | None:intergenic | 45.0% | |
| TGAGTTTGCCGTTGATATGC+CGG | - | chr1.2:82745121-82745140 | MS.gene065074:CDS | 45.0% | |
| TGCCAATTGACACAAGATCG+AGG | + | chr1.2:82748525-82748544 | None:intergenic | 45.0% | |
| TGTTGTAGCAGCACCAAATG+TGG | - | chr1.2:82747604-82747623 | MS.gene065074:CDS | 45.0% | |
| TTACATGGTGGCAAATGCTG+TGG | - | chr1.2:82748558-82748577 | MS.gene065074:CDS | 45.0% | |
| TTGACAGGAGTGGATGTCTT+TGG | + | chr1.2:82746306-82746325 | None:intergenic | 45.0% | |
| TTGTCTGTGACTGTGCTTAG+TGG | + | chr1.2:82745438-82745457 | None:intergenic | 45.0% | |
| ! | AAAAACCGGATGGATTCTCC+GGG | + | chr1.2:82745792-82745811 | None:intergenic | 45.0% |
| ! | AACAATGGCGGAAGAGGTTA+AGG | - | chr1.2:82745888-82745907 | MS.gene065074:intron | 45.0% |
| ! | AGCTTTGATGCTGAAGGAGA+TGG | - | chr1.2:82748949-82748968 | MS.gene065074:CDS | 45.0% |
| ! | GGAAGAAAGCACAAGCACAT+TGG | + | chr1.2:82747166-82747185 | None:intergenic | 45.0% |
| ! | GGTGAACATGATGGAAGTGA+AGG | + | chr1.2:82748653-82748672 | None:intergenic | 45.0% |
| ! | GTCAAAAGAAAGTGTGGACC+TGG | - | chr1.2:82749008-82749027 | MS.gene065074:CDS | 45.0% |
| ! | TGGTTTGACTTAGTCGGCTT+TGG | - | chr1.2:82744966-82744985 | MS.gene065074:CDS | 45.0% |
| ! | TGTTTCAACAATGGCGGAAG+AGG | - | chr1.2:82745882-82745901 | MS.gene065074:intron | 45.0% |
| ! | TTTTACGCAACCAGCTAACC+CGG | - | chr1.2:82745771-82745790 | MS.gene065074:intron | 45.0% |
| !! | AATTCTGGCTTCCTAGCTTG+AGG | + | chr1.2:82748778-82748797 | None:intergenic | 45.0% |
| !! | ATTCTGGCTTCCTAGCTTGA+GGG | + | chr1.2:82748777-82748796 | None:intergenic | 45.0% |
| !! | CATGCTAGCTTTGATGCTGA+AGG | - | chr1.2:82748943-82748962 | MS.gene065074:CDS | 45.0% |
| !! | CTCCGTTGGTTTGACTTAGT+CGG | - | chr1.2:82744960-82744979 | MS.gene065074:CDS | 45.0% |
| !! | TGTGTATCTTTTGCGTTGGC+CGG | - | chr1.2:82747481-82747500 | MS.gene065074:intron | 45.0% |
| AGCTACCTCCGTGTCACATT+CGG | - | chr1.2:82745161-82745180 | MS.gene065074:CDS | 50.0% | |
| ATTCACCGAATGTGACACGG+AGG | + | chr1.2:82745169-82745188 | None:intergenic | 50.0% | |
| CAGCCTTTAAATCCGACGGA+TGG | - | chr1.2:82746139-82746158 | MS.gene065074:intron | 50.0% | |
| CAGTACGAGGGAAAGTTCAG+TGG | - | chr1.2:82745666-82745685 | MS.gene065074:intron | 50.0% | |
| CCAACAGGAGTAGCAAAAGC+AGG | - | chr1.2:82748691-82748710 | MS.gene065074:CDS | 50.0% | |
| CCTCTGGCTGAGATTTGATC+AGG | - | chr1.2:82747345-82747364 | MS.gene065074:intron | 50.0% | |
| CCTGATCAAATCTCAGCCAG+AGG | + | chr1.2:82747348-82747367 | None:intergenic | 50.0% | |
| CGACAGCAACCAAGTCGATT+TGG | + | chr1.2:82745346-82745365 | None:intergenic | 50.0% | |
| CGACTAAGTCAAACCAACGG+AGG | + | chr1.2:82744962-82744981 | None:intergenic | 50.0% | |
| CGTCAAGAGTGATAGGAGTG+GGG | - | chr1.2:82746169-82746188 | MS.gene065074:intron | 50.0% | |
| GCAGCCTACACAAAGAGCTA+AGG | + | chr1.2:82748247-82748266 | None:intergenic | 50.0% | |
| GCAGGGATGTTAAGTGCTTG+TGG | - | chr1.2:82748709-82748728 | MS.gene065074:CDS | 50.0% | |
| GCCGTTGCTAGAAGTTTCAC+TGG | - | chr1.2:82745245-82745264 | MS.gene065074:CDS | 50.0% | |
| GCCTTTAAATCCGACGGATG+GGG | - | chr1.2:82746141-82746160 | MS.gene065074:intron | 50.0% | |
| GCGTCAAGAGTGATAGGAGT+GGG | - | chr1.2:82746168-82746187 | MS.gene065074:intron | 50.0% | |
| GCTGAAGGAGATGGTTCTCT+TGG | - | chr1.2:82748958-82748977 | MS.gene065074:CDS | 50.0% | |
| GCTGGTATCCATGGCATAAG+TGG | + | chr1.2:82748811-82748830 | None:intergenic | 50.0% | |
| GGACCTTAGCAAACCAAGCA+GGG | + | chr1.2:82746281-82746300 | None:intergenic | 50.0% | |
| GTCAAGAGTGATAGGAGTGG+GGG | - | chr1.2:82746170-82746189 | MS.gene065074:intron | 50.0% | |
| GTTCTAATGTGGTCCCTGCT+TGG | - | chr1.2:82746265-82746284 | MS.gene065074:intron | 50.0% | |
| GTTCTATCCTACGCCATTGC+TGG | - | chr1.2:82745065-82745084 | MS.gene065074:CDS | 50.0% | |
| TAAATCCGACGGATGGGGAT+GGG | - | chr1.2:82746146-82746165 | MS.gene065074:intron | 50.0% | |
| TAGTATTTACCGAGGTGGGG+AGG | + | chr1.2:82747938-82747957 | None:intergenic | 50.0% | |
| TCCCCATCCGTCGGATTTAA+AGG | + | chr1.2:82746145-82746164 | None:intergenic | 50.0% | |
| TCTGTGACTGTGCTTAGTGG+TGG | + | chr1.2:82745435-82745454 | None:intergenic | 50.0% | |
| TGGACCTTAGCAAACCAAGC+AGG | + | chr1.2:82746282-82746301 | None:intergenic | 50.0% | |
| TGGCAGGGACAACAAATCCA+TGG | - | chr1.2:82748599-82748618 | MS.gene065074:CDS | 50.0% | |
| TGGGTCCCTTTCCTTTGTGA+AGG | + | chr1.2:82747311-82747330 | None:intergenic | 50.0% | |
| TGTTGCTCTGTGGCTTAGGA+TGG | - | chr1.2:82748017-82748036 | MS.gene065074:CDS | 50.0% | |
| TTAAATCCGACGGATGGGGA+TGG | - | chr1.2:82746145-82746164 | MS.gene065074:intron | 50.0% | |
| ! | AGTGTGTTGCTCTGTGGCTT+AGG | - | chr1.2:82748013-82748032 | MS.gene065074:CDS | 50.0% |
| ! | CACACTTTGATCAGAGGTGC+CGG | - | chr1.2:82745553-82745572 | MS.gene065074:intron | 50.0% |
| ! | CGACGGCTTGGAGATAGTTT+CGG | + | chr1.2:82744836-82744855 | None:intergenic | 50.0% |
| ! | GACTTAGTCGGCTTTGGCAT+CGG | - | chr1.2:82744972-82744991 | MS.gene065074:CDS | 50.0% |
| !! | AGAAAAGCAGAGGCGTTGAC+AGG | + | chr1.2:82746321-82746340 | None:intergenic | 50.0% |
| !! | CCTGCTTTTGCTACTCCTGT+TGG | + | chr1.2:82748694-82748713 | None:intergenic | 50.0% |
| !! | GAGGTAGCTAAAAGCACCAC+CGG | + | chr1.2:82745150-82745169 | None:intergenic | 50.0% |
| !! | GTCAACGCCTCTGCTTTTCT+TGG | - | chr1.2:82746321-82746340 | MS.gene065074:intron | 50.0% |
| !!! | ATCCGGTTTTTTTCCGCACG+GGG | - | chr1.2:82745801-82745820 | MS.gene065074:intron | 50.0% |
| !!! | CATCCGGTTTTTTTCCGCAC+GGG | - | chr1.2:82745800-82745819 | MS.gene065074:intron | 50.0% |
| !!! | CCATCCGGTTTTTTTCCGCA+CGG | - | chr1.2:82745799-82745818 | MS.gene065074:intron | 50.0% |
| AAATGAGCCGCGTTCGAGCT+AGG | - | chr1.2:82744913-82744932 | MS.gene065074:CDS | 55.0% | |
| ACCATCCACACACGTTGCCA+AGG | + | chr1.2:82747254-82747273 | None:intergenic | 55.0% | |
| AGCCCCGTGCGGAAAAAAAC+CGG | + | chr1.2:82745806-82745825 | None:intergenic | 55.0% | |
| CAGGAGTGGATGTCTTTGGG+TGG | + | chr1.2:82746302-82746321 | None:intergenic | 55.0% | |
| CCGTGCGGAAAAAAACCGGA+TGG | + | chr1.2:82745802-82745821 | None:intergenic | 55.0% | |
| CGTAGGATAGAACAACGGCG+GGG | + | chr1.2:82745058-82745077 | None:intergenic | 55.0% | |
| CTATGGTAACCTCCCCACCT+CGG | - | chr1.2:82747926-82747945 | MS.gene065074:CDS | 55.0% | |
| GCAGAAACCAGCAATGGCGT+AGG | + | chr1.2:82745075-82745094 | None:intergenic | 55.0% | |
| GCGTAGGATAGAACAACGGC+GGG | + | chr1.2:82745059-82745078 | None:intergenic | 55.0% | |
| GCTAACCCGGAGAATCCATC+CGG | - | chr1.2:82745784-82745803 | MS.gene065074:intron | 55.0% | |
| GCTGCTGAAAACGGTGCTTC+AGG | + | chr1.2:82746123-82746142 | None:intergenic | 55.0% | |
| GGATGGGCGTCAAGAGTGAT+AGG | - | chr1.2:82746162-82746181 | MS.gene065074:intron | 55.0% | |
| GGCGTAGGATAGAACAACGG+CGG | + | chr1.2:82745060-82745079 | None:intergenic | 55.0% | |
| GGCGTCAAGAGTGATAGGAG+TGG | - | chr1.2:82746167-82746186 | MS.gene065074:intron | 55.0% | |
| GGCTCGAAAAGGATGAGCCA+TGG | + | chr1.2:82744812-82744831 | None:intergenic | 55.0% | |
| GGGGCTGCTGGTGTGTTTAA+CGG | - | chr1.2:82745820-82745839 | MS.gene065074:intron | 55.0% | |
| GGGGTGTACCACTTATGCCA+TGG | - | chr1.2:82748800-82748819 | MS.gene065074:CDS | 55.0% | |
| TCCTTGGCAACGTGTGTGGA+TGG | - | chr1.2:82747250-82747269 | MS.gene065074:intron | 55.0% | |
| ! | ATAGGAGTGGGGGCCAGTTT+TGG | - | chr1.2:82746180-82746199 | MS.gene065074:intron | 55.0% |
| ! | CGGCTTGGAGATAGTTTCGG+AGG | + | chr1.2:82744833-82744852 | None:intergenic | 55.0% |
| ! | GAGAGCGCAGAAACCAGCAA+TGG | + | chr1.2:82745081-82745100 | None:intergenic | 55.0% |
| ! | GGTTTTGCGCATGCTGGTAC+CGG | + | chr1.2:82744940-82744959 | None:intergenic | 55.0% |
| ! | TTAGTCGGCTTTGGCATCGG+CGG | - | chr1.2:82744975-82744994 | MS.gene065074:CDS | 55.0% |
| !! | GATGGATTCTCCGGGTTAGC+TGG | + | chr1.2:82745784-82745803 | None:intergenic | 55.0% |
| !! | GGTCCCTGCTTGGTTTGCTA+AGG | - | chr1.2:82746275-82746294 | MS.gene065074:intron | 55.0% |
| ACCGGCGACCGGCATATCAA+CGG | + | chr1.2:82745132-82745151 | None:intergenic | 60.0% | |
| GCATGCGCAAAACCCTCCGT+TGG | - | chr1.2:82744946-82744965 | MS.gene065074:CDS | 60.0% | |
| GCTGGAGTCTTCGTCACCAC+TGG | - | chr1.2:82745008-82745027 | MS.gene065074:CDS | 60.0% | |
| GGGTACGTCGGCACTACAGT+TGG | - | chr1.2:82745266-82745285 | MS.gene065074:CDS | 60.0% | |
| TACCGGACCTAGCTCGAACG+CGG | + | chr1.2:82744923-82744942 | None:intergenic | 60.0% | |
| ! | ACGGAGGGTTTTGCGCATGC+TGG | + | chr1.2:82744946-82744965 | None:intergenic | 60.0% |
| !! | AGCAGAGGCGTTGACAGGAG+TGG | + | chr1.2:82746316-82746335 | None:intergenic | 60.0% |
| !! | AGGGAGTGTTAGCGACGGCT+TGG | + | chr1.2:82744848-82744867 | None:intergenic | 60.0% |
| !! | CTAAAAGCACCACCGGCGAC+CGG | + | chr1.2:82745143-82745162 | None:intergenic | 60.0% |
| !! | GCGAGAGGGAGTGTTAGCGA+CGG | + | chr1.2:82744853-82744872 | None:intergenic | 60.0% |
| !! | TAGTCGGCTTTGGCATCGGC+GGG | - | chr1.2:82744976-82744995 | MS.gene065074:CDS | 60.0% |
| !! | TTTGGCATCGGCGGGATGGT+CGG | - | chr1.2:82744984-82745003 | MS.gene065074:CDS | 60.0% |
| !!! | TTTTTTCCGCACGGGGCTGC+TGG | - | chr1.2:82745808-82745827 | MS.gene065074:intron | 60.0% |
| AACACACCAGCAGCCCCGTG+CGG | + | chr1.2:82745817-82745836 | None:intergenic | 65.0% | |
| AACACGGCTAGCGTGGCCAG+TGG | + | chr1.2:82745027-82745046 | None:intergenic | 65.0% | |
| AGCCGCGTTCGAGCTAGGTC+CGG | - | chr1.2:82744918-82744937 | MS.gene065074:CDS | 65.0% | |
| CACGCTAGCCGTGTTCACGC+TGG | - | chr1.2:82745032-82745051 | MS.gene065074:CDS | 65.0% | |
| CAGCGTGAACACGGCTAGCG+TGG | + | chr1.2:82745034-82745053 | None:intergenic | 65.0% | |
| CCACGACGAGCGAAGCGAGA+GGG | + | chr1.2:82744867-82744886 | None:intergenic | 65.0% | |
| GCCGTTGATATGCCGGTCGC+CGG | - | chr1.2:82745128-82745147 | MS.gene065074:CDS | 65.0% | |
| GTTGATATGCCGGTCGCCGG+TGG | - | chr1.2:82745131-82745150 | MS.gene065074:CDS | 65.0% | |
| TGACGCCCATCCCCATCCGT+CGG | + | chr1.2:82746154-82746173 | None:intergenic | 65.0% | |
| CCCTCTCGCTTCGCTCGTCG+TGG | - | chr1.2:82744864-82744883 | MS.gene065074:CDS | 70.0% | |
| GCCACGACGAGCGAAGCGAG+AGG | + | chr1.2:82744868-82744887 | None:intergenic | 70.0% | |
| !! | CGGCTTTGGCATCGGCGGGA+TGG | - | chr1.2:82744980-82744999 | MS.gene065074:CDS | 70.0% |
| ATCGGCGGGATGGTCGGCGC+TGG | - | chr1.2:82744990-82745009 | MS.gene065074:CDS | 75.0% | |
| CGGCGGGGCCAGCGTGAACA+CGG | + | chr1.2:82745043-82745062 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 82744801 | 82749050 | 82744801 | ID=MS.gene065074 |
| chr1.2 | mRNA | 82744801 | 82749050 | 82744801 | ID=MS.gene065074.t1;Parent=MS.gene065074 |
| chr1.2 | exon | 82748449 | 82749050 | 82748449 | ID=MS.gene065074.t1.exon1;Parent=MS.gene065074.t1 |
| chr1.2 | CDS | 82748449 | 82749050 | 82748449 | ID=cds.MS.gene065074.t1;Parent=MS.gene065074.t1 |
| chr1.2 | exon | 82747834 | 82748182 | 82747834 | ID=MS.gene065074.t1.exon2;Parent=MS.gene065074.t1 |
| chr1.2 | CDS | 82747834 | 82748182 | 82747834 | ID=cds.MS.gene065074.t1;Parent=MS.gene065074.t1 |
| chr1.2 | exon | 82747509 | 82747737 | 82747509 | ID=MS.gene065074.t1.exon3;Parent=MS.gene065074.t1 |
| chr1.2 | CDS | 82747509 | 82747737 | 82747509 | ID=cds.MS.gene065074.t1;Parent=MS.gene065074.t1 |
| chr1.2 | exon | 82744801 | 82745375 | 82744801 | ID=MS.gene065074.t1.exon4;Parent=MS.gene065074.t1 |
| chr1.2 | CDS | 82744801 | 82745375 | 82744801 | ID=cds.MS.gene065074.t1;Parent=MS.gene065074.t1 |
| Gene Sequence |
| Protein sequence |