Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064148.t1 | XP_003609875.1 | 95 | 580 | 25 | 2 | 1 | 576 | 1 | 580 | 6.40E-298 | 1032.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064148.t1 | Q84R11 | 69.0 | 523 | 155 | 3 | 59 | 574 | 58 | 580 | 1.2e-191 | 671.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064148.t1 | G7JR05 | 95.0 | 580 | 25 | 2 | 1 | 576 | 1 | 580 | 4.6e-298 | 1032.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene064148 | 0.807573 | 4.73E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene064148 | 0.824256 | 8.91E-54 | -1.69E-46 |
| MS.gene049222 | MS.gene064148 | 0.878184 | 3.45E-69 | -1.69E-46 |
| MS.gene049232 | MS.gene064148 | 0.901042 | 4.00E-78 | -1.69E-46 |
| MS.gene049259 | MS.gene064148 | -0.80707 | 6.05E-50 | -1.69E-46 |
| MS.gene049285 | MS.gene064148 | 0.833549 | 5.00E-56 | -1.69E-46 |
| MS.gene049320 | MS.gene064148 | 0.855335 | 6.76E-62 | -1.69E-46 |
| MS.gene049396 | MS.gene064148 | 0.812921 | 3.32E-51 | -1.69E-46 |
| MS.gene049600 | MS.gene064148 | 0.82421 | 9.13E-54 | -1.69E-46 |
| MS.gene049611 | MS.gene064148 | -0.807408 | 5.13E-50 | -1.69E-46 |
| MS.gene049633 | MS.gene064148 | 0.835329 | 1.79E-56 | -1.69E-46 |
| MS.gene049656 | MS.gene064148 | 0.812591 | 3.92E-51 | -1.69E-46 |
| MS.gene049657 | MS.gene064148 | 0.816739 | 4.73E-52 | -1.69E-46 |
| MS.gene049865 | MS.gene064148 | 0.804964 | 1.68E-49 | -1.69E-46 |
| MS.gene050082 | MS.gene064148 | -0.822657 | 2.11E-53 | -1.69E-46 |
| MS.gene05010 | MS.gene064148 | 0.860577 | 1.87E-63 | -1.69E-46 |
| MS.gene050163 | MS.gene064148 | 0.826648 | 2.42E-54 | -1.69E-46 |
| MS.gene050165 | MS.gene064148 | 0.835514 | 1.61E-56 | -1.69E-46 |
| MS.gene050170 | MS.gene064148 | 0.86496 | 8.35E-65 | -1.69E-46 |
| MS.gene050216 | MS.gene064148 | 0.879727 | 9.84E-70 | -1.69E-46 |
| MS.gene050323 | MS.gene064148 | 0.882903 | 7.05E-71 | -1.69E-46 |
| MS.gene050333 | MS.gene064148 | 0.828388 | 9.25E-55 | -1.69E-46 |
| MS.gene050380 | MS.gene064148 | -0.80066 | 1.30E-48 | -1.69E-46 |
| MS.gene050381 | MS.gene064148 | -0.830904 | 2.26E-55 | -1.69E-46 |
| MS.gene050496 | MS.gene064148 | 0.853179 | 2.84E-61 | -1.69E-46 |
| MS.gene050499 | MS.gene064148 | 0.820126 | 8.09E-53 | -1.69E-46 |
| MS.gene050502 | MS.gene064148 | 0.845418 | 4.11E-59 | -1.69E-46 |
| MS.gene050504 | MS.gene064148 | 0.877596 | 5.53E-69 | -1.69E-46 |
| MS.gene050518 | MS.gene064148 | 0.862554 | 4.67E-64 | -1.69E-46 |
| MS.gene050577 | MS.gene064148 | 0.862079 | 6.53E-64 | -1.69E-46 |
| MS.gene050612 | MS.gene064148 | 0.86499 | 8.17E-65 | -1.69E-46 |
| MS.gene050662 | MS.gene064148 | 0.820901 | 5.37E-53 | -1.69E-46 |
| MS.gene050675 | MS.gene064148 | 0.84179 | 3.84E-58 | -1.69E-46 |
| MS.gene050697 | MS.gene064148 | 0.843133 | 1.69E-58 | -1.69E-46 |
| MS.gene050699 | MS.gene064148 | 0.810471 | 1.13E-50 | -1.69E-46 |
| MS.gene050747 | MS.gene064148 | 0.831048 | 2.08E-55 | -1.69E-46 |
| MS.gene050772 | MS.gene064148 | 0.820509 | 6.61E-53 | -1.69E-46 |
| MS.gene05080 | MS.gene064148 | 0.83973 | 1.33E-57 | -1.69E-46 |
| MS.gene050868 | MS.gene064148 | 0.902829 | 6.49E-79 | -1.69E-46 |
| MS.gene050871 | MS.gene064148 | 0.904445 | 1.22E-79 | -1.69E-46 |
| MS.gene050876 | MS.gene064148 | 0.845805 | 3.23E-59 | -1.69E-46 |
| MS.gene050883 | MS.gene064148 | -0.810917 | 9.08E-51 | -1.69E-46 |
| MS.gene050904 | MS.gene064148 | 0.87577 | 2.37E-68 | -1.69E-46 |
| MS.gene050950 | MS.gene064148 | 0.825554 | 4.40E-54 | -1.69E-46 |
| MS.gene050986 | MS.gene064148 | 0.857103 | 2.05E-62 | -1.69E-46 |
| MS.gene05104 | MS.gene064148 | -0.808968 | 2.39E-50 | -1.69E-46 |
| MS.gene051127 | MS.gene064148 | -0.800631 | 1.32E-48 | -1.69E-46 |
| MS.gene051138 | MS.gene064148 | -0.811809 | 5.81E-51 | -1.69E-46 |
| MS.gene05118 | MS.gene064148 | 0.818525 | 1.87E-52 | -1.69E-46 |
| MS.gene051268 | MS.gene064148 | 0.854523 | 1.16E-61 | -1.69E-46 |
| MS.gene051317 | MS.gene064148 | 0.822597 | 2.18E-53 | -1.69E-46 |
| MS.gene051509 | MS.gene064148 | 0.881698 | 1.93E-70 | -1.69E-46 |
| MS.gene051551 | MS.gene064148 | 0.819682 | 1.02E-52 | -1.69E-46 |
| MS.gene051560 | MS.gene064148 | 0.826789 | 2.24E-54 | -1.69E-46 |
| MS.gene051863 | MS.gene064148 | -0.803815 | 2.91E-49 | -1.69E-46 |
| MS.gene051874 | MS.gene064148 | 0.81506 | 1.12E-51 | -1.69E-46 |
| MS.gene051941 | MS.gene064148 | 0.801102 | 1.06E-48 | -1.69E-46 |
| MS.gene052066 | MS.gene064148 | 0.866613 | 2.51E-65 | -1.69E-46 |
| MS.gene052164 | MS.gene064148 | 0.86833 | 7.07E-66 | -1.69E-46 |
| MS.gene052482 | MS.gene064148 | 0.880757 | 4.22E-70 | -1.69E-46 |
| MS.gene052486 | MS.gene064148 | 0.880986 | 3.49E-70 | -1.69E-46 |
| MS.gene052494 | MS.gene064148 | -0.811855 | 5.68E-51 | -1.69E-46 |
| MS.gene052503 | MS.gene064148 | 0.812584 | 3.94E-51 | -1.69E-46 |
| MS.gene052506 | MS.gene064148 | 0.802544 | 5.33E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene064148 | 0.808083 | 3.69E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene064148 | 0.81451 | 1.48E-51 | -1.69E-46 |
| MS.gene052825 | MS.gene064148 | 0.810725 | 9.99E-51 | -1.69E-46 |
| MS.gene052966 | MS.gene064148 | 0.847919 | 8.52E-60 | -1.69E-46 |
| MS.gene053203 | MS.gene064148 | 0.839608 | 1.43E-57 | -1.69E-46 |
| MS.gene053213 | MS.gene064148 | 0.822862 | 1.89E-53 | -1.69E-46 |
| MS.gene053286 | MS.gene064148 | 0.828514 | 8.62E-55 | -1.69E-46 |
| MS.gene053420 | MS.gene064148 | -0.850422 | 1.72E-60 | -1.69E-46 |
| MS.gene053421 | MS.gene064148 | -0.800667 | 1.29E-48 | -1.69E-46 |
| MS.gene053436 | MS.gene064148 | 0.819511 | 1.12E-52 | -1.69E-46 |
| MS.gene053479 | MS.gene064148 | 0.807922 | 3.99E-50 | -1.69E-46 |
| MS.gene053505 | MS.gene064148 | 0.811366 | 7.26E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene064148 | 0.854214 | 1.43E-61 | -1.69E-46 |
| MS.gene053626 | MS.gene064148 | 0.883621 | 3.84E-71 | -1.69E-46 |
| MS.gene053633 | MS.gene064148 | 0.851253 | 1.00E-60 | -1.69E-46 |
| MS.gene053824 | MS.gene064148 | 0.823742 | 1.18E-53 | -1.69E-46 |
| MS.gene053916 | MS.gene064148 | 0.805058 | 1.60E-49 | -1.69E-46 |
| MS.gene054003 | MS.gene064148 | 0.838485 | 2.80E-57 | -1.69E-46 |
| MS.gene054408 | MS.gene064148 | 0.826692 | 2.36E-54 | -1.69E-46 |
| MS.gene054595 | MS.gene064148 | 0.870462 | 1.43E-66 | -1.69E-46 |
| MS.gene054616 | MS.gene064148 | -0.802051 | 6.74E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene064148 | 0.814769 | 1.30E-51 | -1.69E-46 |
| MS.gene054706 | MS.gene064148 | -0.814505 | 1.49E-51 | -1.69E-46 |
| MS.gene054707 | MS.gene064148 | -0.807038 | 6.14E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene064148 | 0.848093 | 7.63E-60 | -1.69E-46 |
| MS.gene054954 | MS.gene064148 | 0.85469 | 1.04E-61 | -1.69E-46 |
| MS.gene055154 | MS.gene064148 | -0.817792 | 2.74E-52 | -1.69E-46 |
| MS.gene055202 | MS.gene064148 | -0.819106 | 1.38E-52 | -1.69E-46 |
| MS.gene055224 | MS.gene064148 | 0.801646 | 8.16E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene064148 | 0.836918 | 7.06E-57 | -1.69E-46 |
| MS.gene055502 | MS.gene064148 | 0.85081 | 1.33E-60 | -1.69E-46 |
| MS.gene055577 | MS.gene064148 | 0.84177 | 3.89E-58 | -1.69E-46 |
| MS.gene055748 | MS.gene064148 | 0.857656 | 1.41E-62 | -1.69E-46 |
| MS.gene055750 | MS.gene064148 | 0.894189 | 3.11E-75 | -1.69E-46 |
| MS.gene055751 | MS.gene064148 | 0.87328 | 1.66E-67 | -1.69E-46 |
| MS.gene055776 | MS.gene064148 | 0.8367 | 8.03E-57 | -1.69E-46 |
| MS.gene05589 | MS.gene064148 | 0.880469 | 5.35E-70 | -1.69E-46 |
| MS.gene055941 | MS.gene064148 | 0.814246 | 1.70E-51 | -1.69E-46 |
| MS.gene056040 | MS.gene064148 | 0.814146 | 1.79E-51 | -1.69E-46 |
| MS.gene056046 | MS.gene064148 | 0.821816 | 3.30E-53 | -1.69E-46 |
| MS.gene056166 | MS.gene064148 | 0.840339 | 9.23E-58 | -1.69E-46 |
| MS.gene056310 | MS.gene064148 | -0.807262 | 5.51E-50 | -1.69E-46 |
| MS.gene056311 | MS.gene064148 | -0.815774 | 7.78E-52 | -1.69E-46 |
| MS.gene056387 | MS.gene064148 | 0.849918 | 2.37E-60 | -1.69E-46 |
| MS.gene056422 | MS.gene064148 | 0.823127 | 1.64E-53 | -1.69E-46 |
| MS.gene056446 | MS.gene064148 | 0.839436 | 1.59E-57 | -1.69E-46 |
| MS.gene056450 | MS.gene064148 | 0.82795 | 1.18E-54 | -1.69E-46 |
| MS.gene056504 | MS.gene064148 | 0.905014 | 6.71E-80 | -1.69E-46 |
| MS.gene056510 | MS.gene064148 | 0.872116 | 4.07E-67 | -1.69E-46 |
| MS.gene056549 | MS.gene064148 | 0.853382 | 2.48E-61 | -1.69E-46 |
| MS.gene056657 | MS.gene064148 | 0.85391 | 1.75E-61 | -1.69E-46 |
| MS.gene056692 | MS.gene064148 | 0.811656 | 6.28E-51 | -1.69E-46 |
| MS.gene056878 | MS.gene064148 | 0.830477 | 2.87E-55 | -1.69E-46 |
| MS.gene057086 | MS.gene064148 | 0.844374 | 7.86E-59 | -1.69E-46 |
| MS.gene057687 | MS.gene064148 | 0.838112 | 3.49E-57 | -1.69E-46 |
| MS.gene057831 | MS.gene064148 | 0.826084 | 3.29E-54 | -1.69E-46 |
| MS.gene057872 | MS.gene064148 | 0.862061 | 6.61E-64 | -1.69E-46 |
| MS.gene05787 | MS.gene064148 | 0.873669 | 1.23E-67 | -1.69E-46 |
| MS.gene057926 | MS.gene064148 | 0.803321 | 3.69E-49 | -1.69E-46 |
| MS.gene058041 | MS.gene064148 | 0.84195 | 3.48E-58 | -1.69E-46 |
| MS.gene058108 | MS.gene064148 | -0.804676 | 1.93E-49 | -1.69E-46 |
| MS.gene058109 | MS.gene064148 | -0.821517 | 3.87E-53 | -1.69E-46 |
| MS.gene058111 | MS.gene064148 | -0.816727 | 4.76E-52 | -1.69E-46 |
| MS.gene058130 | MS.gene064148 | 0.802279 | 6.05E-49 | -1.69E-46 |
| MS.gene058157 | MS.gene064148 | 0.86332 | 2.71E-64 | -1.69E-46 |
| MS.gene058170 | MS.gene064148 | -0.801798 | 7.60E-49 | -1.69E-46 |
| MS.gene058171 | MS.gene064148 | -0.88549 | 7.78E-72 | -1.69E-46 |
| MS.gene058173 | MS.gene064148 | -0.885043 | 1.14E-71 | -1.69E-46 |
| MS.gene058175 | MS.gene064148 | -0.886137 | 4.44E-72 | -1.69E-46 |
| MS.gene058335 | MS.gene064148 | 0.81398 | 1.94E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene064148 | 0.855706 | 5.27E-62 | -1.69E-46 |
| MS.gene058419 | MS.gene064148 | 0.833717 | 4.54E-56 | -1.69E-46 |
| MS.gene058420 | MS.gene064148 | 0.811868 | 5.64E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene064148 | 0.829388 | 5.29E-55 | -1.69E-46 |
| MS.gene059022 | MS.gene064148 | 0.847623 | 1.03E-59 | -1.69E-46 |
| MS.gene059023 | MS.gene064148 | 0.804573 | 2.02E-49 | -1.69E-46 |
| MS.gene059037 | MS.gene064148 | -0.81493 | 1.20E-51 | -1.69E-46 |
| MS.gene059045 | MS.gene064148 | -0.857103 | 2.05E-62 | -1.69E-46 |
| MS.gene05913 | MS.gene064148 | 0.836765 | 7.72E-57 | -1.69E-46 |
| MS.gene059305 | MS.gene064148 | 0.823448 | 1.38E-53 | -1.69E-46 |
| MS.gene059367 | MS.gene064148 | 0.876306 | 1.55E-68 | -1.69E-46 |
| MS.gene059368 | MS.gene064148 | 0.820805 | 5.65E-53 | -1.69E-46 |
| MS.gene059517 | MS.gene064148 | 0.805675 | 1.19E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene064148 | 0.829334 | 5.46E-55 | -1.69E-46 |
| MS.gene059677 | MS.gene064148 | 0.821058 | 4.94E-53 | -1.69E-46 |
| MS.gene059718 | MS.gene064148 | 0.822799 | 1.95E-53 | -1.69E-46 |
| MS.gene059801 | MS.gene064148 | 0.827238 | 1.75E-54 | -1.69E-46 |
| MS.gene059837 | MS.gene064148 | 0.81107 | 8.41E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene064148 | 0.902646 | 7.83E-79 | -1.69E-46 |
| MS.gene06000 | MS.gene064148 | 0.864055 | 1.60E-64 | -1.69E-46 |
| MS.gene060187 | MS.gene064148 | -0.82427 | 8.84E-54 | -1.69E-46 |
| MS.gene060295 | MS.gene064148 | 0.846433 | 2.18E-59 | -1.69E-46 |
| MS.gene060339 | MS.gene064148 | 0.814576 | 1.44E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene064148 | 0.826995 | 2.00E-54 | -1.69E-46 |
| MS.gene060593 | MS.gene064148 | -0.804656 | 1.95E-49 | -1.69E-46 |
| MS.gene060595 | MS.gene064148 | -0.879889 | 8.62E-70 | -1.69E-46 |
| MS.gene060703 | MS.gene064148 | 0.837591 | 4.75E-57 | -1.69E-46 |
| MS.gene060762 | MS.gene064148 | 0.86934 | 3.33E-66 | -1.69E-46 |
| MS.gene060778 | MS.gene064148 | 0.913847 | 3.82E-84 | -1.69E-46 |
| MS.gene06077 | MS.gene064148 | 0.883335 | 4.89E-71 | -1.69E-46 |
| MS.gene06097 | MS.gene064148 | 0.855393 | 6.50E-62 | -1.69E-46 |
| MS.gene060982 | MS.gene064148 | 0.890649 | 8.14E-74 | -1.69E-46 |
| MS.gene061134 | MS.gene064148 | 0.84602 | 2.82E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene073784 | MS.gene064148 | PPI |
| MS.gene20038 | MS.gene064148 | PPI |
| MS.gene30905 | MS.gene064148 | PPI |
| MS.gene22464 | MS.gene064148 | PPI |
| MS.gene067520 | MS.gene064148 | PPI |
| MS.gene029871 | MS.gene064148 | PPI |
| MS.gene09808 | MS.gene064148 | PPI |
| MS.gene007461 | MS.gene064148 | PPI |
| MS.gene073783 | MS.gene064148 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064148.t1 | MTR_4g123930 | 96.207 | 580 | 18 | 2 | 1 | 576 | 1 | 580 | 0.0 | 1135 |
| MS.gene064148.t1 | MTR_4g123930 | 98.000 | 450 | 9 | 0 | 127 | 576 | 1 | 450 | 0.0 | 905 |
| MS.gene064148.t1 | MTR_4g123930 | 94.796 | 442 | 19 | 2 | 1 | 438 | 1 | 442 | 0.0 | 855 |
| MS.gene064148.t1 | MTR_4g123930 | 96.795 | 312 | 10 | 0 | 127 | 438 | 1 | 312 | 0.0 | 625 |
| MS.gene064148.t1 | MTR_7g108940 | 29.752 | 363 | 218 | 8 | 116 | 452 | 175 | 526 | 4.93e-40 | 156 |
| MS.gene064148.t1 | MTR_7g108940 | 29.752 | 363 | 218 | 8 | 116 | 452 | 175 | 526 | 6.73e-40 | 156 |
| MS.gene064148.t1 | MTR_8g020880 | 29.261 | 352 | 212 | 7 | 108 | 452 | 242 | 563 | 1.35e-33 | 136 |
| MS.gene064148.t1 | MTR_8g020880 | 29.261 | 352 | 212 | 7 | 108 | 452 | 242 | 563 | 1.44e-33 | 136 |
| MS.gene064148.t1 | MTR_5g007870 | 36.719 | 128 | 74 | 3 | 303 | 429 | 443 | 564 | 2.27e-14 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064148.t1 | AT3G17470 | 69.275 | 524 | 154 | 3 | 58 | 574 | 72 | 595 | 0.0 | 714 |
| MS.gene064148.t1 | AT3G17470 | 69.275 | 524 | 154 | 3 | 58 | 574 | 57 | 580 | 0.0 | 713 |
| MS.gene064148.t1 | AT3G17470 | 68.668 | 383 | 118 | 1 | 58 | 438 | 57 | 439 | 0.0 | 545 |
| MS.gene064148.t1 | AT1G54130 | 32.530 | 332 | 191 | 7 | 108 | 431 | 234 | 540 | 4.27e-38 | 150 |
| MS.gene064148.t1 | AT3G14050 | 32.530 | 332 | 190 | 9 | 109 | 431 | 230 | 536 | 6.40e-37 | 146 |
| MS.gene064148.t1 | AT4G02260 | 29.969 | 327 | 199 | 7 | 116 | 423 | 177 | 492 | 8.79e-37 | 146 |
| MS.gene064148.t1 | AT4G02260 | 29.787 | 329 | 201 | 7 | 116 | 425 | 177 | 494 | 1.07e-36 | 146 |
| MS.gene064148.t1 | AT4G02260 | 29.787 | 329 | 201 | 7 | 116 | 425 | 177 | 494 | 1.26e-36 | 146 |
| MS.gene064148.t1 | AT4G02260 | 29.697 | 330 | 201 | 8 | 116 | 425 | 177 | 495 | 4.11e-35 | 141 |
Find 143 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCACTTGGAAAATCTTTA+AGG | 0.162251 | 8.4:+10932848 | None:intergenic |
| TGACATTAGAGCTTTGATTT+TGG | 0.217842 | 8.4:-10933797 | MS.gene064148:CDS |
| ATCCACTAATTCCGCAAGTA+TGG | 0.254255 | 8.4:+10933498 | None:intergenic |
| AGCACATCATTTACATCTTC+TGG | 0.271709 | 8.4:+10933403 | None:intergenic |
| CATGCTGGCTGCAGCTGAAC+TGG | 0.295606 | 8.4:-10932881 | MS.gene064148:CDS |
| CATGCTTCTCGCTGATCTTC+AGG | 0.298040 | 8.4:-10935022 | MS.gene064148:intron |
| GCAGTGGATGTAAGTGAAAT+TGG | 0.300443 | 8.4:-10933208 | MS.gene064148:CDS |
| TAACTACATATCACTTGAAT+TGG | 0.301558 | 8.4:-10933656 | MS.gene064148:CDS |
| CAGGTATATAATAAGGAGTT+TGG | 0.304931 | 8.4:-10932296 | MS.gene064148:CDS |
| TTTCCAAGTGCAAATCATAA+AGG | 0.319956 | 8.4:-10932838 | MS.gene064148:CDS |
| TTTAATTCAGGTATATAATA+AGG | 0.339845 | 8.4:-10932303 | MS.gene064148:CDS |
| AGAGGAGAGCTTTGAAGAAC+AGG | 0.345980 | 8.4:+10935090 | None:intergenic |
| GTGGATGATATCTCAGTTAA+AGG | 0.351684 | 8.4:-10933481 | MS.gene064148:CDS |
| TGCATCTAGAGTAGACATTC+TGG | 0.356083 | 8.4:-10933866 | MS.gene064148:CDS |
| TCCACATAAAGATATGAATA+AGG | 0.356386 | 8.4:+10933607 | None:intergenic |
| GGATTTCTTTCCACATAGAT+TGG | 0.373050 | 8.4:+10933293 | None:intergenic |
| AATGCATTATCTCCAGACTT+AGG | 0.376086 | 8.4:+10933358 | None:intergenic |
| AGGTTCTGCTACTGCTCATT+TGG | 0.380091 | 8.4:-10933917 | MS.gene064148:CDS |
| CTGGAGAGAGAGCGTGCTAC+AGG | 0.382710 | 8.4:-10933330 | MS.gene064148:CDS |
| TTCCAAGTGCAAATCATAAA+GGG | 0.388198 | 8.4:-10932837 | MS.gene064148:CDS |
| TGGGAGGACTAGACCCTTGA+TGG | 0.390942 | 8.4:-10933188 | MS.gene064148:CDS |
| GATTATATTGCCAGGCCAAA+AGG | 0.405490 | 8.4:-10933256 | MS.gene064148:CDS |
| ACAGATAAGAACTACTGAAA+TGG | 0.407491 | 8.4:-10933161 | MS.gene064148:CDS |
| TGATGAATACAAGAAAATAT+TGG | 0.408026 | 8.4:-10932357 | MS.gene064148:CDS |
| TAAGCGGTGGTGAGTGGTAG+TGG | 0.408658 | 8.4:+10935314 | None:intergenic |
| AGATGATAGTGGTTTAATTC+AGG | 0.409345 | 8.4:-10932315 | MS.gene064148:CDS |
| CATATCTTTATGTGGATACA+TGG | 0.412806 | 8.4:-10933600 | MS.gene064148:CDS |
| CGAGATGGTTCGTAATTTAG+AGG | 0.415458 | 8.4:-10932387 | MS.gene064148:CDS |
| TTGAGAGAGGTGTTGGAAGT+AGG | 0.431304 | 8.4:-10933973 | MS.gene064148:CDS |
| GAAAGAGGAGAGCGACCATC+AGG | 0.433390 | 8.4:+10935063 | None:intergenic |
| CACAATGAAGAAGCTCTTGA+AGG | 0.442293 | 8.4:-10933437 | MS.gene064148:CDS |
| ATGCATTATCTCCAGACTTA+GGG | 0.442953 | 8.4:+10933359 | None:intergenic |
| ATGGTGGCGCGTGGGGTAAT+CGG | 0.443215 | 8.4:+10935353 | None:intergenic |
| TCCCATACTTGCGGAATTAG+TGG | 0.444671 | 8.4:-10933500 | MS.gene064148:CDS |
| ATGATCTGCTGCTGATACCT+TGG | 0.450610 | 8.4:+10933730 | None:intergenic |
| CATGGCAATGGATAAAGCTT+TGG | 0.451814 | 8.4:+10935041 | None:intergenic |
| AAGAAAACACTAACCTCCTC+TGG | 0.456445 | 8.4:+10933079 | None:intergenic |
| TCCTTATTCATATCTTTATG+TGG | 0.459286 | 8.4:-10933608 | MS.gene064148:CDS |
| ATGTCATGTGCATCTTCTCC+TGG | 0.459375 | 8.4:+10932709 | None:intergenic |
| CTTGACATGATGAGGCATCT+TGG | 0.461356 | 8.4:-10933760 | MS.gene064148:CDS |
| GCGTGTGCTGTAGAAGTTCC+CGG | 0.463247 | 8.4:-10935228 | MS.gene064148:CDS |
| TCTTATCTGTATTTCCATCA+AGG | 0.463566 | 8.4:+10933174 | None:intergenic |
| TTCTCGACAAGAACGGAGAT+GGG | 0.464209 | 8.4:-10932780 | MS.gene064148:CDS |
| CATGAAGTTCGAAGTCAGAT+AGG | 0.464988 | 8.4:-10933937 | MS.gene064148:CDS |
| TGGATACAAAAGTTTGCATA+TGG | 0.465288 | 8.4:-10933230 | MS.gene064148:CDS |
| GAGCGACCATCAGGAGTAAG+AGG | 0.466122 | 8.4:+10935072 | None:intergenic |
| GGAACTTACAGAGGTGATAG+AGG | 0.467883 | 8.4:-10932743 | MS.gene064148:CDS |
| CTTCATATGGCAGATGATAG+TGG | 0.471188 | 8.4:-10932326 | MS.gene064148:CDS |
| ATTATATTGCCAGGCCAAAA+GGG | 0.474542 | 8.4:-10933255 | MS.gene064148:CDS |
| GTGACGCGGGTGGGTCGAGT+GGG | 0.475192 | 8.4:+10935276 | None:intergenic |
| TGCTCCTCTTGCTCATGCTG+TGG | 0.479821 | 8.4:-10933683 | MS.gene064148:CDS |
| ATAATAAGGAGTTTGGCAAC+AGG | 0.480517 | 8.4:-10932289 | MS.gene064148:CDS |
| GTGTTATCCACAAGTTCCTC+TGG | 0.484331 | 8.4:-10935144 | MS.gene064148:CDS |
| AGCTCTCCTCTTACTCCTGA+TGG | 0.487226 | 8.4:-10935078 | MS.gene064148:CDS |
| GGAGATAATGCATTGGAAGC+TGG | 0.491096 | 8.4:-10933349 | MS.gene064148:CDS |
| CTTCTCGACAAGAACGGAGA+TGG | 0.492481 | 8.4:-10932781 | MS.gene064148:CDS |
| GGTGACGCGGGTGGGTCGAG+TGG | 0.492820 | 8.4:+10935275 | None:intergenic |
| ATTGGATGAGAAACTTCATA+TGG | 0.494227 | 8.4:-10932339 | MS.gene064148:CDS |
| GTGGTGTTGAACCCTAAGTC+TGG | 0.496487 | 8.4:-10933370 | MS.gene064148:CDS |
| TGTGGAAAGAAATCCCTTCT+CGG | 0.498703 | 8.4:-10933285 | MS.gene064148:CDS |
| CAGTGGATGTAAGTGAAATT+GGG | 0.501702 | 8.4:-10933207 | MS.gene064148:CDS |
| TGGTTTGTTTGAGAAGAGAA+TGG | 0.502046 | 8.4:+10935334 | None:intergenic |
| GATGCAGAAGTTATATCTGC+TGG | 0.508548 | 8.4:-10934000 | MS.gene064148:CDS |
| TATCACCATCTTTCCTCCAC+CGG | 0.511134 | 8.4:+10935209 | None:intergenic |
| ACTCGACCCACCCGCGTCAC+CGG | 0.513152 | 8.4:-10935273 | MS.gene064148:CDS |
| TGAGAGTAAGCGGTGGTGAG+TGG | 0.513797 | 8.4:+10935308 | None:intergenic |
| GGATACATGGTTGAGAAGTC+AGG | 0.514914 | 8.4:-10933587 | MS.gene064148:CDS |
| ATAGAGGAGCTTGGTGCACC+AGG | 0.521684 | 8.4:-10932727 | MS.gene064148:CDS |
| ACGCTCTCGGAGTGGACCAC+CGG | 0.522401 | 8.4:+10935247 | None:intergenic |
| CTTATCTGTATTTCCATCAA+GGG | 0.524648 | 8.4:+10933175 | None:intergenic |
| CCGGAGACCGGTGACGCGGG+TGG | 0.524804 | 8.4:+10935266 | None:intergenic |
| ATCCCTTTATGATTTGCACT+TGG | 0.525949 | 8.4:+10932835 | None:intergenic |
| GCTCCTCTTGCTCATGCTGT+GGG | 0.528069 | 8.4:-10933682 | MS.gene064148:CDS |
| CAAAAGTTTGCATATGGCAG+TGG | 0.532210 | 8.4:-10933224 | MS.gene064148:CDS |
| CCACCCGCGTCACCGGTCTC+CGG | 0.535267 | 8.4:-10935266 | MS.gene064148:CDS |
| AGTTCCCGGTGGAGGAAAGA+TGG | 0.535806 | 8.4:-10935214 | MS.gene064148:CDS |
| ATTGCCAGGCCAAAAGGGAA+TGG | 0.535893 | 8.4:-10933250 | MS.gene064148:CDS |
| ATGGATAGGTTAGCTGTTGG+TGG | 0.537695 | 8.4:-10933142 | MS.gene064148:CDS |
| TCTCATTCATTATACAAGGC+TGG | 0.539860 | 8.4:-10933112 | MS.gene064148:CDS |
| AAGAAGACCAGAGGAACTTG+TGG | 0.542935 | 8.4:+10935137 | None:intergenic |
| CTTCTTGACTCGAACAGTGA+TGG | 0.544084 | 8.4:-10932679 | MS.gene064148:CDS |
| TTTCGCCTTCTCGACAAGAA+CGG | 0.544865 | 8.4:-10932787 | MS.gene064148:CDS |
| CATCTCCGTTCTTGTCGAGA+AGG | 0.545112 | 8.4:+10932782 | None:intergenic |
| GGCATCTTGGTCACCTTCCA+AGG | 0.547221 | 8.4:-10933747 | MS.gene064148:CDS |
| ATGGATAAAGCTTTGGAAAG+AGG | 0.547465 | 8.4:+10935048 | None:intergenic |
| TAGGTTAGCTGTTGGTGGAA+TGG | 0.547704 | 8.4:-10933137 | MS.gene064148:CDS |
| ACTTCTACAGCACACGCTCT+CGG | 0.548640 | 8.4:+10935234 | None:intergenic |
| CGGAGTGGACCACCGGAGAC+CGG | 0.548762 | 8.4:+10935254 | None:intergenic |
| GGACTAAAGATTATATTGCC+AGG | 0.550792 | 8.4:-10933264 | MS.gene064148:CDS |
| CTGAAATTCATCAGAGCTGA+GGG | 0.550894 | 8.4:+10932654 | None:intergenic |
| GGAAGAAGAGTGAGAGTAAG+CGG | 0.551427 | 8.4:+10935298 | None:intergenic |
| TCCACTAATTCCGCAAGTAT+GGG | 0.553251 | 8.4:+10933499 | None:intergenic |
| GCTGTAGAAGTTCCCGGTGG+AGG | 0.555769 | 8.4:-10935222 | MS.gene064148:CDS |
| TGACGCGGGTGGGTCGAGTG+GGG | 0.558230 | 8.4:+10935277 | None:intergenic |
| ATCAGCGAGAAGCATGGCAA+TGG | 0.559213 | 8.4:+10935029 | None:intergenic |
| ATCAAATCATCCAATCTATG+TGG | 0.562146 | 8.4:-10933303 | MS.gene064148:CDS |
| GAAGATGTAAATGATGTGCT+TGG | 0.567130 | 8.4:-10933400 | MS.gene064148:CDS |
| CTTTGAAGCTTGACATGATG+AGG | 0.569527 | 8.4:-10933768 | MS.gene064148:CDS |
| AGAGCTTTGAAGAACAGGAA+TGG | 0.570567 | 8.4:+10935095 | None:intergenic |
| TGGAATATTGAGAGAGGTGT+TGG | 0.571119 | 8.4:-10933980 | MS.gene064148:CDS |
| TAAGAACTACTGAAATGGAT+AGG | 0.574391 | 8.4:-10933156 | MS.gene064148:CDS |
| TATAATCTTTAGTCCGAGAA+GGG | 0.574454 | 8.4:+10933272 | None:intergenic |
| GGCATCTCATTCATTATACA+AGG | 0.575422 | 8.4:-10933116 | MS.gene064148:CDS |
| GAGAAGAGAATGGTGGCGCG+TGG | 0.575660 | 8.4:+10935344 | None:intergenic |
| TTCAGCTGCAGCCAGCATGA+TGG | 0.579396 | 8.4:+10932885 | None:intergenic |
| AGAAGAGAATGGTGGCGCGT+GGG | 0.580259 | 8.4:+10935345 | None:intergenic |
| ATCACCATCTTTCCTCCACC+GGG | 0.581759 | 8.4:+10935210 | None:intergenic |
| ACCACCGGAGACCGGTGACG+CGG | 0.582141 | 8.4:+10935262 | None:intergenic |
| ATGAAGAAGCTCTTGAAGGA+TGG | 0.584555 | 8.4:-10933433 | MS.gene064148:CDS |
| ATATAATCTTTAGTCCGAGA+AGG | 0.585270 | 8.4:+10933271 | None:intergenic |
| AGAAGAGTGAGAGTAAGCGG+TGG | 0.586254 | 8.4:+10935301 | None:intergenic |
| TGGTTGAGAAGTCAGGAGAC+AGG | 0.587107 | 8.4:-10933580 | MS.gene064148:CDS |
| ATTCCCACAGCATGAGCAAG+AGG | 0.587161 | 8.4:+10933679 | None:intergenic |
| CGGAGACCGGTGACGCGGGT+GGG | 0.591943 | 8.4:+10935267 | None:intergenic |
| TAAGTCTGGAGATAATGCAT+TGG | 0.596696 | 8.4:-10933356 | MS.gene064148:CDS |
| GCGTTTAAAGACCATCATGC+TGG | 0.599824 | 8.4:-10932896 | MS.gene064148:CDS |
| CCACCGGAGACCGGTGACGC+GGG | 0.602844 | 8.4:+10935263 | None:intergenic |
| AGAAGCTCTTGAAGGATGGT+CGG | 0.606805 | 8.4:-10933429 | MS.gene064148:CDS |
| TGGAGAGAGAGCGTGCTACA+GGG | 0.607107 | 8.4:-10933329 | MS.gene064148:CDS |
| GAAGAGAATGGTGGCGCGTG+GGG | 0.611821 | 8.4:+10935346 | None:intergenic |
| TACAGCACACGCTCTCGGAG+TGG | 0.612388 | 8.4:+10935239 | None:intergenic |
| ACAGAGGTGATAGAGGAGCT+TGG | 0.612835 | 8.4:-10932736 | MS.gene064148:CDS |
| AAAATCTGATCCCATACTTG+CGG | 0.616260 | 8.4:-10933509 | MS.gene064148:CDS |
| CCCGCGTCACCGGTCTCCGG+TGG | 0.617971 | 8.4:-10935263 | MS.gene064148:CDS |
| TCTGCTGCTGATACCTTGGA+AGG | 0.625070 | 8.4:+10933734 | None:intergenic |
| CTGAAGATCAGCGAGAAGCA+TGG | 0.633168 | 8.4:+10935023 | None:intergenic |
| TGATTTGACTGAGAGGATGA+AGG | 0.637086 | 8.4:-10935166 | MS.gene064148:CDS |
| CTTTCAATGATTTGACTGAG+AGG | 0.637305 | 8.4:-10935173 | MS.gene064148:CDS |
| TCTGAAATTCATCAGAGCTG+AGG | 0.641418 | 8.4:+10932653 | None:intergenic |
| AGATGGGAAGATAAGCATTG+AGG | 0.649781 | 8.4:-10932764 | MS.gene064148:CDS |
| ATCTGCTGGAATATTGAGAG+AGG | 0.655258 | 8.4:-10933986 | MS.gene064148:CDS |
| GGCTGGTCTTACTAATCCAG+AGG | 0.657487 | 8.4:-10933095 | MS.gene064148:CDS |
| AAGATGGTGATAGAGCTTGT+CGG | 0.658286 | 8.4:-10935198 | MS.gene064148:CDS |
| TGATGTGCTTGGACTGCGAG+TGG | 0.660485 | 8.4:-10933389 | MS.gene064148:CDS |
| TGGTCTTACTAATCCAGAGG+AGG | 0.668643 | 8.4:-10933092 | MS.gene064148:intron |
| GCGTGGGGTAATCGGAAGCG+TGG | 0.673355 | 8.4:+10935361 | None:intergenic |
| TGATTTGAAAAGAAGACCAG+AGG | 0.678594 | 8.4:+10935128 | None:intergenic |
| TGGATGTAAGTGAAATTGGG+AGG | 0.681330 | 8.4:-10933204 | MS.gene064148:CDS |
| TTTGTTTGAGAAGAGAATGG+TGG | 0.686445 | 8.4:+10935337 | None:intergenic |
| AAGCATTGAGGAACTTACAG+AGG | 0.688318 | 8.4:-10932752 | MS.gene064148:CDS |
| GAAATGGATAGGTTAGCTGT+TGG | 0.706251 | 8.4:-10933145 | MS.gene064148:CDS |
| TTGAGAAGTCAGGAGACAGG+TGG | 0.721078 | 8.4:-10933577 | MS.gene064148:CDS |
| TGTGCTGTAGAAGTTCCCGG+TGG | 0.767826 | 8.4:-10935225 | MS.gene064148:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATGTTAGATAATAGATA+TGG | - | chr8.4:10933218-10933237 | MS.gene064148:CDS | 15.0% |
| !! | TACTATAAAGAAACAATAAA+CGG | + | chr8.4:10933619-10933638 | None:intergenic | 15.0% |
| !! | TTTAATTCAGGTATATAATA+AGG | - | chr8.4:10935352-10935371 | MS.gene064148:CDS | 15.0% |
| !!! | AAGAAAATATTCCTTTTTTT+AGG | - | chr8.4:10932866-10932885 | MS.gene064148:CDS | 15.0% |
| !!! | GCAATTGATTTTAAATAATT+TGG | + | chr8.4:10933404-10933423 | None:intergenic | 15.0% |
| !!! | TCTATTTGTTTTATTAGTTA+AGG | + | chr8.4:10933175-10933194 | None:intergenic | 15.0% |
| !! | AAGTCAATAAATAGTAATCA+TGG | + | chr8.4:10932809-10932828 | None:intergenic | 20.0% |
| !! | AATATTGTGGTATACATATA+AGG | - | chr8.4:10933029-10933048 | MS.gene064148:intron | 20.0% |
| !! | AGTTGTACATAATTTCTTAA+TGG | - | chr8.4:10935126-10935145 | MS.gene064148:CDS | 20.0% |
| !! | ATGAAAATGAATGAAAGTAA+TGG | + | chr8.4:10932665-10932684 | None:intergenic | 20.0% |
| !! | ATTATTCAATGAACCTAAAA+AGG | + | chr8.4:10932919-10932938 | None:intergenic | 20.0% |
| !! | TGATGAATACAAGAAAATAT+TGG | - | chr8.4:10935298-10935317 | MS.gene064148:CDS | 20.0% |
| !!! | ATAAGAAAAGATTCCTTTTT+AGG | - | chr8.4:10932903-10932922 | MS.gene064148:CDS | 20.0% |
| !!! | ATAATTGATTTTGACATGTT+TGG | - | chr8.4:10933302-10933321 | MS.gene064148:CDS | 20.0% |
| !!! | TATTTTCTTATATTTCAGAC+CGG | + | chr8.4:10932855-10932874 | None:intergenic | 20.0% |
| !!! | TATTTTCTTATATTTGAGAC+CGG | - | chr8.4:10933002-10933021 | MS.gene064148:intron | 20.0% |
| !!! | TGTTTTATTTTTTGATACTC+AGG | - | chr8.4:10934732-10934751 | MS.gene064148:intron | 20.0% |
| ! | AACAAATAGATAAGCTTAGA+AGG | - | chr8.4:10933185-10933204 | MS.gene064148:CDS | 25.0% |
| ! | CAAGTTAGAATCAATTATAG+AGG | + | chr8.4:10933353-10933372 | None:intergenic | 25.0% |
| ! | CTACTCAATGAATCTAAAAA+AGG | - | chr8.4:10932977-10932996 | MS.gene064148:intron | 25.0% |
| ! | TAACTACATATCACTTGAAT+TGG | - | chr8.4:10933999-10934018 | MS.gene064148:CDS | 25.0% |
| ! | TCCACATAAAGATATGAATA+AGG | + | chr8.4:10934051-10934070 | None:intergenic | 25.0% |
| ! | TCCTTATTCATATCTTTATG+TGG | - | chr8.4:10934047-10934066 | MS.gene064148:intron | 25.0% |
| !! | AATTTCAGTAAGAGTTTGTT+TGG | + | chr8.4:10933561-10933580 | None:intergenic | 25.0% |
| !!! | CACGTCTTTTTAAGAAATTA+TGG | - | chr8.4:10935103-10935122 | MS.gene064148:CDS | 25.0% |
| AACAGCTACTATACTCTTAA+TGG | + | chr8.4:10933459-10933478 | None:intergenic | 30.0% | |
| ACAGATAAGAACTACTGAAA+TGG | - | chr8.4:10934494-10934513 | MS.gene064148:intron | 30.0% | |
| ATAATTTGGTTATGTGTCTC+TGG | + | chr8.4:10933390-10933409 | None:intergenic | 30.0% | |
| ATAGTAAATGTGATTGCAGA+TGG | - | chr8.4:10933633-10933652 | MS.gene064148:CDS | 30.0% | |
| ATATAATCTTTAGTCCGAGA+AGG | + | chr8.4:10934387-10934406 | None:intergenic | 30.0% | |
| ATCAAATCATCCAATCTATG+TGG | - | chr8.4:10934352-10934371 | MS.gene064148:intron | 30.0% | |
| ATTGGATGAGAAACTTCATA+TGG | - | chr8.4:10935316-10935335 | MS.gene064148:CDS | 30.0% | |
| ATTTCAGATGTTCCAAAAAC+AGG | - | chr8.4:10935017-10935036 | MS.gene064148:intron | 30.0% | |
| CAAAGTCTCACACATATAAT+TGG | + | chr8.4:10932755-10932774 | None:intergenic | 30.0% | |
| CAATGAAATTATGACACTCA+AGG | + | chr8.4:10933596-10933615 | None:intergenic | 30.0% | |
| CAATTATATGTGTGAGACTT+TGG | - | chr8.4:10932753-10932772 | MS.gene064148:CDS | 30.0% | |
| CAGGTATATAATAAGGAGTT+TGG | - | chr8.4:10935359-10935378 | MS.gene064148:CDS | 30.0% | |
| CATATCTTTATGTGGATACA+TGG | - | chr8.4:10934055-10934074 | MS.gene064148:intron | 30.0% | |
| CATTGAGTAGTTAATGTATG+TGG | + | chr8.4:10932967-10932986 | None:intergenic | 30.0% | |
| CTTATCTGTATTTCCATCAA+GGG | + | chr8.4:10934483-10934502 | None:intergenic | 30.0% | |
| CTTGCAAAGATGAATGAATA+CGG | + | chr8.4:10934611-10934630 | None:intergenic | 30.0% | |
| GACATGAAAAAGAAGGAAAT+TGG | - | chr8.4:10934702-10934721 | MS.gene064148:intron | 30.0% | |
| TAAGAACTACTGAAATGGAT+AGG | - | chr8.4:10934499-10934518 | MS.gene064148:intron | 30.0% | |
| TAGCTCAAGTATATATGCTT+TGG | + | chr8.4:10935168-10935187 | None:intergenic | 30.0% | |
| TATAATCTTTAGTCCGAGAA+GGG | + | chr8.4:10934386-10934405 | None:intergenic | 30.0% | |
| TATGTAACTCTAGTGGTATT+TGG | - | chr8.4:10935235-10935254 | MS.gene064148:CDS | 30.0% | |
| TCTTATCTGTATTTCCATCA+AGG | + | chr8.4:10934484-10934503 | None:intergenic | 30.0% | |
| TGAATTGTATGTAACTCTAG+TGG | - | chr8.4:10935228-10935247 | MS.gene064148:CDS | 30.0% | |
| TGAGACTTGAACCTAAAAAA+AGG | + | chr8.4:10932880-10932899 | None:intergenic | 30.0% | |
| TGGATACAAAAGTTTGCATA+TGG | - | chr8.4:10934425-10934444 | MS.gene064148:intron | 30.0% | |
| TTACATACAATTCATGAGAC+AGG | + | chr8.4:10935222-10935241 | None:intergenic | 30.0% | |
| TTCCAAGTGCAAATCATAAA+GGG | - | chr8.4:10934818-10934837 | MS.gene064148:intron | 30.0% | |
| TTGCACTTGGAAAATCTTTA+AGG | + | chr8.4:10934810-10934829 | None:intergenic | 30.0% | |
| TTGCAGTTAACAAAACACAT+AGG | - | chr8.4:10933420-10933439 | MS.gene064148:CDS | 30.0% | |
| TTTCCAAGTGCAAATCATAA+AGG | - | chr8.4:10934817-10934836 | MS.gene064148:intron | 30.0% | |
| ! | TTTTTCATGTCTAAGGAGTT+AGG | + | chr8.4:10934693-10934712 | None:intergenic | 30.0% |
| !! | AATTTGACATTTTGAGAGCA+AGG | - | chr8.4:10933070-10933089 | MS.gene064148:intron | 30.0% |
| !! | AGATGATAGTGGTTTAATTC+AGG | - | chr8.4:10935340-10935359 | MS.gene064148:CDS | 30.0% |
| !! | AGTGTTGTTTAGTCTCAATT+TGG | - | chr8.4:10933098-10933117 | MS.gene064148:CDS | 30.0% |
| !! | TGACATTAGAGCTTTGATTT+TGG | - | chr8.4:10933858-10933877 | MS.gene064148:CDS | 30.0% |
| !! | TTCCTTCTTTTTCATGTCTA+AGG | + | chr8.4:10934700-10934719 | None:intergenic | 30.0% |
| AAAATCTGATCCCATACTTG+CGG | - | chr8.4:10934146-10934165 | MS.gene064148:intron | 35.0% | |
| AATGCATTATCTCCAGACTT+AGG | + | chr8.4:10934300-10934319 | None:intergenic | 35.0% | |
| AGCACATCATTTACATCTTC+TGG | + | chr8.4:10934255-10934274 | None:intergenic | 35.0% | |
| AGGTGATTTGATGTCTTATC+AGG | - | chr8.4:10935037-10935056 | MS.gene064148:CDS | 35.0% | |
| ATAATAAGGAGTTTGGCAAC+AGG | - | chr8.4:10935366-10935385 | MS.gene064148:CDS | 35.0% | |
| ATGCATTATCTCCAGACTTA+GGG | + | chr8.4:10934299-10934318 | None:intergenic | 35.0% | |
| ATTATATTGCCAGGCCAAAA+GGG | - | chr8.4:10934400-10934419 | MS.gene064148:intron | 35.0% | |
| CAGTGGATGTAAGTGAAATT+GGG | - | chr8.4:10934448-10934467 | MS.gene064148:intron | 35.0% | |
| CTCCTTAGACATGAAAAAGA+AGG | - | chr8.4:10934695-10934714 | MS.gene064148:intron | 35.0% | |
| CTTTCAATGATTTGACTGAG+AGG | - | chr8.4:10932482-10932501 | MS.gene064148:intron | 35.0% | |
| GAAGATGTAAATGATGTGCT+TGG | - | chr8.4:10934255-10934274 | MS.gene064148:intron | 35.0% | |
| GGACTAAAGATTATATTGCC+AGG | - | chr8.4:10934391-10934410 | MS.gene064148:intron | 35.0% | |
| GGATTTCTTTCCACATAGAT+TGG | + | chr8.4:10934365-10934384 | None:intergenic | 35.0% | |
| GGCATCTCATTCATTATACA+AGG | - | chr8.4:10934539-10934558 | MS.gene064148:intron | 35.0% | |
| GTGGATGATATCTCAGTTAA+AGG | - | chr8.4:10934174-10934193 | MS.gene064148:intron | 35.0% | |
| TAAGTCTGGAGATAATGCAT+TGG | - | chr8.4:10934299-10934318 | MS.gene064148:intron | 35.0% | |
| TCTCATTCATTATACAAGGC+TGG | - | chr8.4:10934543-10934562 | MS.gene064148:intron | 35.0% | |
| TGATTTGAAAAGAAGACCAG+AGG | + | chr8.4:10932530-10932549 | None:intergenic | 35.0% | |
| TTCTTATATTTCAGACCGGA+GGG | + | chr8.4:10932851-10932870 | None:intergenic | 35.0% | |
| TTTCACCAAACACACATGTA+AGG | + | chr8.4:10933269-10933288 | None:intergenic | 35.0% | |
| TTTCTTATATTTCAGACCGG+AGG | + | chr8.4:10932852-10932871 | None:intergenic | 35.0% | |
| TTTGTTTGAGAAGAGAATGG+TGG | + | chr8.4:10932321-10932340 | None:intergenic | 35.0% | |
| ! | ATCCCTTTATGATTTGCACT+TGG | + | chr8.4:10934823-10934842 | None:intergenic | 35.0% |
| ! | CTTTTGTATCCATTCCCTTT+TGG | + | chr8.4:10934417-10934436 | None:intergenic | 35.0% |
| ! | GACATCAAATCACCTGTTTT+TGG | + | chr8.4:10935032-10935051 | None:intergenic | 35.0% |
| ! | TGCTTTGGTAATCAGATAGT+TGG | + | chr8.4:10935153-10935172 | None:intergenic | 35.0% |
| ! | TTCTTATATTTGAGACCGGA+GGG | - | chr8.4:10933006-10933025 | MS.gene064148:intron | 35.0% |
| ! | TTTCTTATATTTGAGACCGG+AGG | - | chr8.4:10933005-10933024 | MS.gene064148:intron | 35.0% |
| !! | ATGGATAAAGCTTTGGAAAG+AGG | + | chr8.4:10932610-10932629 | None:intergenic | 35.0% |
| !! | TAAGCTTAGAAGGTTGATGA+TGG | - | chr8.4:10933195-10933214 | MS.gene064148:CDS | 35.0% |
| !! | TAGAGCTTTGATTTTGGACT+TGG | - | chr8.4:10933864-10933883 | MS.gene064148:CDS | 35.0% |
| !! | TGGTTTGTTTGAGAAGAGAA+TGG | + | chr8.4:10932324-10932343 | None:intergenic | 35.0% |
| !! | TGTGTGTTTGGTGAAACTTT+TGG | - | chr8.4:10933273-10933292 | MS.gene064148:CDS | 35.0% |
| !!! | CTAGTGGTATTTGGTTTTGT+AGG | - | chr8.4:10935244-10935263 | MS.gene064148:CDS | 35.0% |
| AAGAAAACACTAACCTCCTC+TGG | + | chr8.4:10934579-10934598 | None:intergenic | 40.0% | |
| AAGATGGTGATAGAGCTTGT+CGG | - | chr8.4:10932457-10932476 | MS.gene064148:intron | 40.0% | |
| ATCCACTAATTCCGCAAGTA+TGG | + | chr8.4:10934160-10934179 | None:intergenic | 40.0% | |
| ATCTGCTGGAATATTGAGAG+AGG | - | chr8.4:10933669-10933688 | MS.gene064148:CDS | 40.0% | |
| ATGAAGAAGCTCTTGAAGGA+TGG | - | chr8.4:10934222-10934241 | MS.gene064148:intron | 40.0% | |
| CAAAAGTTTGCATATGGCAG+TGG | - | chr8.4:10934431-10934450 | MS.gene064148:intron | 40.0% | |
| CACAATGAAGAAGCTCTTGA+AGG | - | chr8.4:10934218-10934237 | MS.gene064148:intron | 40.0% | |
| CATGAAGTTCGAAGTCAGAT+AGG | - | chr8.4:10933718-10933737 | MS.gene064148:CDS | 40.0% | |
| CATGGCAATGGATAAAGCTT+TGG | + | chr8.4:10932617-10932636 | None:intergenic | 40.0% | |
| CGAGATGGTTCGTAATTTAG+AGG | - | chr8.4:10935268-10935287 | MS.gene064148:CDS | 40.0% | |
| CTGAAATTCATCAGAGCTGA+GGG | + | chr8.4:10935004-10935023 | None:intergenic | 40.0% | |
| CTTCATATGGCAGATGATAG+TGG | - | chr8.4:10935329-10935348 | MS.gene064148:CDS | 40.0% | |
| GATGCAGAAGTTATATCTGC+TGG | - | chr8.4:10933655-10933674 | MS.gene064148:CDS | 40.0% | |
| GATTATATTGCCAGGCCAAA+AGG | - | chr8.4:10934399-10934418 | MS.gene064148:intron | 40.0% | |
| GCAGTGGATGTAAGTGAAAT+TGG | - | chr8.4:10934447-10934466 | MS.gene064148:intron | 40.0% | |
| GTATACCACAATATTCCCTC+CGG | + | chr8.4:10933024-10933043 | None:intergenic | 40.0% | |
| GTTGACCTTACATGTGTGTT+TGG | - | chr8.4:10933261-10933280 | MS.gene064148:CDS | 40.0% | |
| TCCACTAATTCCGCAAGTAT+GGG | + | chr8.4:10934159-10934178 | None:intergenic | 40.0% | |
| TCTAAGGAGTTAGGTCTAGA+TGG | + | chr8.4:10934684-10934703 | None:intergenic | 40.0% | |
| TGATTTGACTGAGAGGATGA+AGG | - | chr8.4:10932489-10932508 | MS.gene064148:intron | 40.0% | |
| TGGATGTAAGTGAAATTGGG+AGG | - | chr8.4:10934451-10934470 | MS.gene064148:intron | 40.0% | |
| TGTGGAAAGAAATCCCTTCT+CGG | - | chr8.4:10934370-10934389 | MS.gene064148:intron | 40.0% | |
| ! | AGATGGGAAGATAAGCATTG+AGG | - | chr8.4:10934891-10934910 | MS.gene064148:intron | 40.0% |
| ! | GAAATGGATAGGTTAGCTGT+TGG | - | chr8.4:10934510-10934529 | MS.gene064148:intron | 40.0% |
| ! | TCTGAAATTCATCAGAGCTG+AGG | + | chr8.4:10935005-10935024 | None:intergenic | 40.0% |
| ! | TGCATCTAGAGTAGACATTC+TGG | - | chr8.4:10933789-10933808 | MS.gene064148:CDS | 40.0% |
| ! | TGGAATATTGAGAGAGGTGT+TGG | - | chr8.4:10933675-10933694 | MS.gene064148:CDS | 40.0% |
| !! | AAGCATTGAGGAACTTACAG+AGG | - | chr8.4:10934903-10934922 | MS.gene064148:intron | 40.0% |
| !! | AGAGCTTTGAAGAACAGGAA+TGG | + | chr8.4:10932563-10932582 | None:intergenic | 40.0% |
| !! | CTTTGAAGCTTGACATGATG+AGG | - | chr8.4:10933887-10933906 | MS.gene064148:CDS | 40.0% |
| !! | GTGTTTGGTGAAACTTTTGG+AGG | - | chr8.4:10933276-10933295 | MS.gene064148:CDS | 40.0% |
| !!! | TTTGGTTTTGTAGGTCGAGA+TGG | - | chr8.4:10935253-10935272 | MS.gene064148:CDS | 40.0% |
| AAGAAGACCAGAGGAACTTG+TGG | + | chr8.4:10932521-10932540 | None:intergenic | 45.0% | |
| AGAAGCTCTTGAAGGATGGT+CGG | - | chr8.4:10934226-10934245 | MS.gene064148:intron | 45.0% | |
| AGGTTCTGCTACTGCTCATT+TGG | - | chr8.4:10933738-10933757 | MS.gene064148:CDS | 45.0% | |
| ATGATCTGCTGCTGATACCT+TGG | + | chr8.4:10933928-10933947 | None:intergenic | 45.0% | |
| ATGTCATGTGCATCTTCTCC+TGG | + | chr8.4:10934949-10934968 | None:intergenic | 45.0% | |
| GCGTTTAAAGACCATCATGC+TGG | - | chr8.4:10934759-10934778 | MS.gene064148:intron | 45.0% | |
| GGAACTTACAGAGGTGATAG+AGG | - | chr8.4:10934912-10934931 | MS.gene064148:intron | 45.0% | |
| GGAAGAAGAGTGAGAGTAAG+CGG | + | chr8.4:10932360-10932379 | None:intergenic | 45.0% | |
| GGAGATAATGCATTGGAAGC+TGG | - | chr8.4:10934306-10934325 | MS.gene064148:intron | 45.0% | |
| GGATACATGGTTGAGAAGTC+AGG | - | chr8.4:10934068-10934087 | MS.gene064148:intron | 45.0% | |
| GTGTTATCCACAAGTTCCTC+TGG | - | chr8.4:10932511-10932530 | MS.gene064148:intron | 45.0% | |
| TATCACCATCTTTCCTCCAC+CGG | + | chr8.4:10932449-10932468 | None:intergenic | 45.0% | |
| TCCCATACTTGCGGAATTAG+TGG | - | chr8.4:10934155-10934174 | MS.gene064148:intron | 45.0% | |
| TCTTAAACTTGTCCTCCCTC+CGG | - | chr8.4:10932833-10932852 | MS.gene064148:CDS | 45.0% | |
| TTATATTTCAGACCGGAGGG+AGG | + | chr8.4:10932848-10932867 | None:intergenic | 45.0% | |
| TTCTCGACAAGAACGGAGAT+GGG | - | chr8.4:10934875-10934894 | MS.gene064148:intron | 45.0% | |
| TTTCGCCTTCTCGACAAGAA+CGG | - | chr8.4:10934868-10934887 | MS.gene064148:intron | 45.0% | |
| ! | ATGGATAGGTTAGCTGTTGG+TGG | - | chr8.4:10934513-10934532 | MS.gene064148:intron | 45.0% |
| ! | CTTCTTGACTCGAACAGTGA+TGG | - | chr8.4:10934976-10934995 | MS.gene064148:intron | 45.0% |
| ! | CTTGACATGATGAGGCATCT+TGG | - | chr8.4:10933895-10933914 | MS.gene064148:CDS | 45.0% |
| ! | TAGGTTAGCTGTTGGTGGAA+TGG | - | chr8.4:10934518-10934537 | MS.gene064148:intron | 45.0% |
| ! | TGGTCTTACTAATCCAGAGG+AGG | - | chr8.4:10934563-10934582 | MS.gene064148:intron | 45.0% |
| !! | AGAGGAGAGCTTTGAAGAAC+AGG | + | chr8.4:10932568-10932587 | None:intergenic | 45.0% |
| !! | TTGAGAGAGGTGTTGGAAGT+AGG | - | chr8.4:10933682-10933701 | MS.gene064148:CDS | 45.0% |
| ACAGAGGTGATAGAGGAGCT+TGG | - | chr8.4:10934919-10934938 | MS.gene064148:intron | 50.0% | |
| ACTTCTACAGCACACGCTCT+CGG | + | chr8.4:10932424-10932443 | None:intergenic | 50.0% | |
| AGAAGAGTGAGAGTAAGCGG+TGG | + | chr8.4:10932357-10932376 | None:intergenic | 50.0% | |
| AGCTCTCCTCTTACTCCTGA+TGG | - | chr8.4:10932577-10932596 | MS.gene064148:intron | 50.0% | |
| ATCACCATCTTTCCTCCACC+GGG | + | chr8.4:10932448-10932467 | None:intergenic | 50.0% | |
| ATTCCCACAGCATGAGCAAG+AGG | + | chr8.4:10933979-10933998 | None:intergenic | 50.0% | |
| ATTGCCAGGCCAAAAGGGAA+TGG | - | chr8.4:10934405-10934424 | MS.gene064148:intron | 50.0% | |
| CATCTCCGTTCTTGTCGAGA+AGG | + | chr8.4:10934876-10934895 | None:intergenic | 50.0% | |
| CATGCTTCTCGCTGATCTTC+AGG | - | chr8.4:10932633-10932652 | MS.gene064148:intron | 50.0% | |
| CTGAAGATCAGCGAGAAGCA+TGG | + | chr8.4:10932635-10932654 | None:intergenic | 50.0% | |
| CTTCTCGACAAGAACGGAGA+TGG | - | chr8.4:10934874-10934893 | MS.gene064148:intron | 50.0% | |
| TCTGCTGCTGATACCTTGGA+AGG | + | chr8.4:10933924-10933943 | None:intergenic | 50.0% | |
| TGAGACCGGAGGGAATATTG+TGG | - | chr8.4:10933016-10933035 | MS.gene064148:intron | 50.0% | |
| TGGTTGAGAAGTCAGGAGAC+AGG | - | chr8.4:10934075-10934094 | MS.gene064148:intron | 50.0% | |
| TTGAGAAGTCAGGAGACAGG+TGG | - | chr8.4:10934078-10934097 | MS.gene064148:intron | 50.0% | |
| ! | ATCAGCGAGAAGCATGGCAA+TGG | + | chr8.4:10932629-10932648 | None:intergenic | 50.0% |
| ! | GTATCCATTCCCTTTTGGCC+TGG | + | chr8.4:10934412-10934431 | None:intergenic | 50.0% |
| ! | GTGGTGTTGAACCCTAAGTC+TGG | - | chr8.4:10934285-10934304 | MS.gene064148:intron | 50.0% |
| !! | GGCTGGTCTTACTAATCCAG+AGG | - | chr8.4:10934560-10934579 | MS.gene064148:intron | 50.0% |
| AGTTCCCGGTGGAGGAAAGA+TGG | - | chr8.4:10932441-10932460 | MS.gene064148:intron | 55.0% | |
| GAAAGAGGAGAGCGACCATC+AGG | + | chr8.4:10932595-10932614 | None:intergenic | 55.0% | |
| GAGCGACCATCAGGAGTAAG+AGG | + | chr8.4:10932586-10932605 | None:intergenic | 55.0% | |
| GCGTGTGCTGTAGAAGTTCC+CGG | - | chr8.4:10932427-10932446 | MS.gene064148:intron | 55.0% | |
| GCTCCTCTTGCTCATGCTGT+GGG | - | chr8.4:10933973-10933992 | MS.gene064148:CDS | 55.0% | |
| GGCATCTTGGTCACCTTCCA+AGG | - | chr8.4:10933908-10933927 | MS.gene064148:CDS | 55.0% | |
| TAAGCGGTGGTGAGTGGTAG+TGG | + | chr8.4:10932344-10932363 | None:intergenic | 55.0% | |
| TGAGAGTAAGCGGTGGTGAG+TGG | + | chr8.4:10932350-10932369 | None:intergenic | 55.0% | |
| TGATGTGCTTGGACTGCGAG+TGG | - | chr8.4:10934266-10934285 | MS.gene064148:intron | 55.0% | |
| TGCTCCTCTTGCTCATGCTG+TGG | - | chr8.4:10933972-10933991 | MS.gene064148:CDS | 55.0% | |
| TGGGAGGACTAGACCCTTGA+TGG | - | chr8.4:10934467-10934486 | MS.gene064148:intron | 55.0% | |
| TGTGCTGTAGAAGTTCCCGG+TGG | - | chr8.4:10932430-10932449 | MS.gene064148:intron | 55.0% | |
| TTCAGCTGCAGCCAGCATGA+TGG | + | chr8.4:10934773-10934792 | None:intergenic | 55.0% | |
| ! | AGAAGAGAATGGTGGCGCGT+GGG | + | chr8.4:10932313-10932332 | None:intergenic | 55.0% |
| ! | TGGAGAGAGAGCGTGCTACA+GGG | - | chr8.4:10934326-10934345 | MS.gene064148:intron | 55.0% |
| !! | ATAGAGGAGCTTGGTGCACC+AGG | - | chr8.4:10934928-10934947 | MS.gene064148:intron | 55.0% |
| GCTGTAGAAGTTCCCGGTGG+AGG | - | chr8.4:10932433-10932452 | MS.gene064148:intron | 60.0% | |
| TACAGCACACGCTCTCGGAG+TGG | + | chr8.4:10932419-10932438 | None:intergenic | 60.0% | |
| ! | ATGGTGGCGCGTGGGGTAAT+CGG | + | chr8.4:10932305-10932324 | None:intergenic | 60.0% |
| ! | CATGCTGGCTGCAGCTGAAC+TGG | - | chr8.4:10934774-10934793 | MS.gene064148:intron | 60.0% |
| ! | CTGGAGAGAGAGCGTGCTAC+AGG | - | chr8.4:10934325-10934344 | MS.gene064148:intron | 60.0% |
| ! | GAAGAGAATGGTGGCGCGTG+GGG | + | chr8.4:10932312-10932331 | None:intergenic | 60.0% |
| ! | GAGAAGAGAATGGTGGCGCG+TGG | + | chr8.4:10932314-10932333 | None:intergenic | 60.0% |
| ACGCTCTCGGAGTGGACCAC+CGG | + | chr8.4:10932411-10932430 | None:intergenic | 65.0% | |
| GCGTGGGGTAATCGGAAGCG+TGG | + | chr8.4:10932297-10932316 | None:intergenic | 65.0% | |
| ACCACCGGAGACCGGTGACG+CGG | + | chr8.4:10932396-10932415 | None:intergenic | 70.0% | |
| ACTCGACCCACCCGCGTCAC+CGG | - | chr8.4:10932382-10932401 | MS.gene064148:CDS | 70.0% | |
| CGGAGTGGACCACCGGAGAC+CGG | + | chr8.4:10932404-10932423 | None:intergenic | 70.0% | |
| GTGACGCGGGTGGGTCGAGT+GGG | + | chr8.4:10932382-10932401 | None:intergenic | 70.0% | |
| TGACGCGGGTGGGTCGAGTG+GGG | + | chr8.4:10932381-10932400 | None:intergenic | 70.0% | |
| CCACCCGCGTCACCGGTCTC+CGG | - | chr8.4:10932389-10932408 | MS.gene064148:CDS | 75.0% | |
| CCACCGGAGACCGGTGACGC+GGG | + | chr8.4:10932395-10932414 | None:intergenic | 75.0% | |
| CGGAGACCGGTGACGCGGGT+GGG | + | chr8.4:10932391-10932410 | None:intergenic | 75.0% | |
| GGTGACGCGGGTGGGTCGAG+TGG | + | chr8.4:10932383-10932402 | None:intergenic | 75.0% | |
| ! | CCCGCGTCACCGGTCTCCGG+TGG | - | chr8.4:10932392-10932411 | MS.gene064148:CDS | 80.0% |
| ! | CCGGAGACCGGTGACGCGGG+TGG | + | chr8.4:10932392-10932411 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 10932277 | 10935400 | 10932277 | ID=MS.gene064148 |
| chr8.4 | mRNA | 10932277 | 10935400 | 10932277 | ID=MS.gene064148.t1;Parent=MS.gene064148 |
| chr8.4 | exon | 10935023 | 10935400 | 10935023 | ID=MS.gene064148.t1.exon1;Parent=MS.gene064148.t1 |
| chr8.4 | CDS | 10935023 | 10935400 | 10935023 | ID=cds.MS.gene064148.t1;Parent=MS.gene064148.t1 |
| chr8.4 | exon | 10933093 | 10934025 | 10933093 | ID=MS.gene064148.t1.exon2;Parent=MS.gene064148.t1 |
| chr8.4 | CDS | 10933093 | 10934025 | 10933093 | ID=cds.MS.gene064148.t1;Parent=MS.gene064148.t1 |
| chr8.4 | exon | 10932639 | 10932923 | 10932639 | ID=MS.gene064148.t1.exon3;Parent=MS.gene064148.t1 |
| chr8.4 | CDS | 10932639 | 10932923 | 10932639 | ID=cds.MS.gene064148.t1;Parent=MS.gene064148.t1 |
| chr8.4 | exon | 10932277 | 10932411 | 10932277 | ID=MS.gene064148.t1.exon4;Parent=MS.gene064148.t1 |
| chr8.4 | CDS | 10932277 | 10932411 | 10932277 | ID=cds.MS.gene064148.t1;Parent=MS.gene064148.t1 |
| Gene Sequence |
| Protein sequence |
