Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007726.t1 | XP_013455932.1 | 99.6 | 225 | 1 | 0 | 1 | 225 | 1 | 225 | 8.40E-31 | 144.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007726.t1 | Q9FFB3 | 75.3 | 227 | 54 | 1 | 1 | 225 | 1 | 227 | 1.0e-21 | 105.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007726.t1 | I3S694 | 99.6 | 225 | 1 | 0 | 1 | 225 | 1 | 225 | 6.0e-31 | 144.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene23464 | MS.gene007726 | PPI |
| MS.gene007726 | MS.gene025196 | PPI |
| MS.gene033909 | MS.gene007726 | PPI |
| MS.gene007726 | MS.gene75911 | PPI |
| MS.gene96973 | MS.gene007726 | PPI |
| MS.gene75244 | MS.gene007726 | PPI |
| MS.gene98009 | MS.gene007726 | PPI |
| MS.gene018678 | MS.gene007726 | PPI |
| MS.gene020387 | MS.gene007726 | PPI |
| MS.gene051184 | MS.gene007726 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007726.t1 | MTR_4g057565 | 99.556 | 225 | 1 | 0 | 1 | 225 | 1 | 225 | 1.76e-160 | 443 |
| MS.gene007726.t1 | MTR_1g069715 | 31.892 | 185 | 126 | 0 | 1 | 185 | 462 | 646 | 4.65e-23 | 97.4 |
| MS.gene007726.t1 | MTR_2g047875 | 29.412 | 221 | 148 | 1 | 5 | 225 | 1 | 213 | 4.70e-20 | 85.1 |
| MS.gene007726.t1 | MTR_7g097170 | 32.093 | 215 | 130 | 3 | 5 | 214 | 1 | 204 | 4.67e-18 | 79.7 |
| MS.gene007726.t1 | MTR_2g041190 | 30.588 | 170 | 116 | 2 | 7 | 175 | 4 | 172 | 1.02e-14 | 70.9 |
| MS.gene007726.t1 | MTR_8g019700 | 27.684 | 177 | 126 | 2 | 7 | 182 | 4 | 179 | 1.54e-14 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007726.t1 | AT5G22950 | 82.819 | 227 | 37 | 1 | 1 | 225 | 1 | 227 | 2.28e-124 | 352 |
| MS.gene007726.t1 | AT3G45000 | 72.081 | 197 | 53 | 1 | 31 | 225 | 2 | 198 | 5.65e-86 | 253 |
| MS.gene007726.t1 | AT3G45000 | 75.912 | 137 | 31 | 1 | 91 | 225 | 1 | 137 | 3.65e-57 | 178 |
| MS.gene007726.t1 | AT1G03950 | 31.579 | 209 | 137 | 2 | 5 | 213 | 1 | 203 | 4.95e-28 | 106 |
| MS.gene007726.t1 | AT5G44560 | 29.834 | 181 | 127 | 0 | 5 | 185 | 1 | 181 | 9.94e-21 | 87.4 |
| MS.gene007726.t1 | AT5G44560 | 29.213 | 178 | 126 | 0 | 5 | 182 | 1 | 178 | 4.33e-20 | 84.7 |
| MS.gene007726.t1 | AT2G06530 | 29.907 | 214 | 135 | 5 | 4 | 205 | 1 | 211 | 8.67e-17 | 76.6 |
| MS.gene007726.t1 | AT5G44560 | 28.662 | 157 | 112 | 0 | 29 | 185 | 5 | 161 | 1.09e-14 | 70.5 |
| MS.gene007726.t1 | AT5G44560 | 30.534 | 131 | 91 | 0 | 5 | 135 | 1 | 131 | 8.04e-13 | 64.3 |
| MS.gene007726.t1 | AT2G06530 | 29.167 | 192 | 122 | 4 | 25 | 205 | 2 | 190 | 1.13e-12 | 65.1 |
Find 42 sgRNAs with CRISPR-Local
Find 349 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAATAACTGTTGCGGATT+TGG | 0.162141 | 4.4:+45794158 | None:intergenic |
| AAGAAGAAATGGAAGAAATT+AGG | 0.185877 | 4.4:-45789443 | MS.gene007726:CDS |
| TGCATAGCAACAGCCATTTC+AGG | 0.256684 | 4.4:+45789891 | None:intergenic |
| AACTGTTGCGGATTTGGTTT+CGG | 0.312520 | 4.4:+45794164 | None:intergenic |
| CGCAACAGTTATTGAGAGAT+TGG | 0.341374 | 4.4:-45794151 | MS.gene007726:CDS |
| GAACCGTCTGCATGAAAATA+AGG | 0.358366 | 4.4:-45792768 | MS.gene007726:CDS |
| TGACCTGACTTTAGCGAGTC+TGG | 0.371271 | 4.4:+45789419 | None:intergenic |
| AGAAGAAATGGAAGAAATTA+GGG | 0.376649 | 4.4:-45789442 | MS.gene007726:CDS |
| CTACAGAACTTGTGAGATCT+AGG | 0.401420 | 4.4:-45792799 | MS.gene007726:CDS |
| CCTCATGAAGGCTCCTGAAA+TGG | 0.421101 | 4.4:-45789904 | MS.gene007726:CDS |
| TCCTCTGCGGCACTTTGAGC+AGG | 0.453503 | 4.4:+45789583 | None:intergenic |
| TTCAGCAATTGCTCGTACTG+TGG | 0.454062 | 4.4:-45789970 | MS.gene007726:intron |
| TGATTTAGATATTCAGAGAG+AGG | 0.474813 | 4.4:-45793985 | MS.gene007726:intron |
| TGTTGATGATGAAGAAGAAA+TGG | 0.478357 | 4.4:-45789454 | MS.gene007726:CDS |
| TTCTTCATCATCAACACCCT+CGG | 0.485224 | 4.4:+45789461 | None:intergenic |
| GTTTCAGGCAGGAGTAATTG+AGG | 0.506660 | 4.4:-45789755 | MS.gene007726:intron |
| GGGCCAGACTCGCTAAAGTC+AGG | 0.512607 | 4.4:-45789422 | MS.gene007726:intron |
| CTATTAAAGAAGCTGCTAAG+AGG | 0.518339 | 4.4:-45793944 | MS.gene007726:CDS |
| AAAGTCTTAACTGAATTAGC+TGG | 0.521196 | 4.4:-45789658 | MS.gene007726:CDS |
| TCAGCAATTGCTCGTACTGT+GGG | 0.530452 | 4.4:-45789969 | MS.gene007726:intron |
| AACATTGAACGACAAATTCG+CGG | 0.539995 | 4.4:-45794101 | MS.gene007726:intron |
| TGAAGCTGTGAGGAAACAAA+AGG | 0.551851 | 4.4:-45789614 | MS.gene007726:CDS |
| CAATCTCTCAATAACTGTTG+CGG | 0.557549 | 4.4:+45794152 | None:intergenic |
| TGCTCAAAGTGCCGCAGAGG+AGG | 0.582103 | 4.4:-45789581 | MS.gene007726:intron |
| AACTCAATATCAATGCACCT+TGG | 0.594406 | 4.4:-45792737 | MS.gene007726:CDS |
| ACCTGCTCAAAGTGCCGCAG+AGG | 0.595296 | 4.4:-45789584 | MS.gene007726:CDS |
| TGACTCAGCATTAGATTCTG+AGG | 0.600712 | 4.4:-45789713 | MS.gene007726:CDS |
| CAGGAAGATGCTATAGCCGA+GGG | 0.609938 | 4.4:-45789477 | MS.gene007726:CDS |
| GCTTGTCAATAACCTCATGA+AGG | 0.612171 | 4.4:-45789916 | MS.gene007726:CDS |
| ACCTACCAACACTTTCTCCA+AGG | 0.615558 | 4.4:+45792720 | None:intergenic |
| CCATTTCAGGAGCCTTCATG+AGG | 0.615981 | 4.4:+45789904 | None:intergenic |
| GAATGACATTGGTTCTGCAA+AGG | 0.618815 | 4.4:-45793922 | MS.gene007726:intron |
| GCAGGAAGATGCTATAGCCG+AGG | 0.620355 | 4.4:-45789478 | MS.gene007726:intron |
| ATGCACCTTGGAGAAAGTGT+TGG | 0.628455 | 4.4:-45792725 | MS.gene007726:intron |
| ATTGACAAGCTTCATAACCT+CGG | 0.641959 | 4.4:+45789929 | None:intergenic |
| TATATCAGGGCACAATGCAG+AGG | 0.655974 | 4.4:+45789287 | None:intergenic |
| CACAACTTCCTGAAGCTGTG+AGG | 0.670413 | 4.4:-45789624 | MS.gene007726:CDS |
| AACTGCATGTACCTCCTCTG+CGG | 0.671034 | 4.4:+45789570 | None:intergenic |
| GCTGCTAAGAGGAATGACAT+TGG | 0.677222 | 4.4:-45793933 | MS.gene007726:CDS |
| CACAGCTTCAGGAAGTTGTG+CGG | 0.680019 | 4.4:+45789627 | None:intergenic |
| ACATCTATCAAAGAGTGCCG+AGG | 0.689000 | 4.4:-45789946 | MS.gene007726:CDS |
| GTTCAGCAAAGAAATGACCA+AGG | 0.706921 | 4.4:-45789865 | MS.gene007726:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTATTTTTTTTATTTT+GGG | - | chr4.4:45790159-45790178 | MS.gene007726:intron | 0.0% |
| !!! | TTTTTTTATTTTTTTTATTT+TGG | - | chr4.4:45790158-45790177 | MS.gene007726:intron | 0.0% |
| !!! | ATATTTTTTAATCTTTACAA+TGG | - | chr4.4:45792339-45792358 | MS.gene007726:intron | 10.0% |
| !! | AAAAAAAACCTAAGTTAAAT+AGG | - | chr4.4:45791154-45791173 | MS.gene007726:intron | 15.0% |
| !!! | ATTTTATCTATAGTTTTTTG+AGG | - | chr4.4:45791457-45791476 | MS.gene007726:intron | 15.0% |
| !!! | TTTTTAATTAAGAGTATGTT+TGG | + | chr4.4:45791019-45791038 | None:intergenic | 15.0% |
| !! | AAAATCTAATATCCTTATCA+TGG | - | chr4.4:45790635-45790654 | MS.gene007726:intron | 20.0% |
| !! | AAGATAAAACTTCATGAAAT+TGG | - | chr4.4:45792917-45792936 | MS.gene007726:intron | 20.0% |
| !! | ATGGTTTATGATAAAACATA+GGG | - | chr4.4:45789956-45789975 | MS.gene007726:CDS | 20.0% |
| !! | GTTAATTGCATGATAATTAT+TGG | - | chr4.4:45793693-45793712 | MS.gene007726:intron | 20.0% |
| !! | GTTTCTCTTAAAAAATTTCT+AGG | + | chr4.4:45789896-45789915 | None:intergenic | 20.0% |
| !! | TATGGTTTATGATAAAACAT+AGG | - | chr4.4:45789955-45789974 | MS.gene007726:CDS | 20.0% |
| !!! | AGTGTATATACAAGTTTTTA+TGG | - | chr4.4:45790346-45790365 | MS.gene007726:intron | 20.0% |
| !!! | CATAATTGTTTCATTTTAGA+TGG | - | chr4.4:45792262-45792281 | MS.gene007726:intron | 20.0% |
| !!! | GTTTTATCATAAACCATATT+TGG | + | chr4.4:45789953-45789972 | None:intergenic | 20.0% |
| !!! | TAAGAATAAAATTAGCTTAG+TGG | - | chr4.4:45789655-45789674 | MS.gene007726:CDS | 20.0% |
| !!! | TATGGTGTTTTACAATTATA+AGG | - | chr4.4:45792554-45792573 | MS.gene007726:intron | 20.0% |
| !!! | TTTTAAGAGAGATCAAAAAA+TGG | + | chr4.4:45789413-45789432 | None:intergenic | 20.0% |
| !!! | TTTTATTCTTAAGTTACTAC+AGG | + | chr4.4:45789646-45789665 | None:intergenic | 20.0% |
| !!! | TTTTTTAATCTTTACAATGG+CGG | - | chr4.4:45792342-45792361 | MS.gene007726:intron | 20.0% |
| ! | AAGAAGAAATGGAAGAAATT+AGG | - | chr4.4:45794039-45794058 | MS.gene007726:intron | 25.0% |
| ! | AGAAGAAATGGAAGAAATTA+GGG | - | chr4.4:45794040-45794059 | MS.gene007726:intron | 25.0% |
| ! | AGAAGAATCAAGTATCAATT+AGG | + | chr4.4:45789437-45789456 | None:intergenic | 25.0% |
| ! | AGATTTAGTGATTAATGAGT+TGG | - | chr4.4:45789925-45789944 | MS.gene007726:CDS | 25.0% |
| ! | ATGGTATTTGTTCAATTTAC+AGG | - | chr4.4:45790654-45790673 | MS.gene007726:intron | 25.0% |
| ! | ATTGAACAAATACCATGATA+AGG | + | chr4.4:45790650-45790669 | None:intergenic | 25.0% |
| ! | CATAATATAGTCATTGTACA+AGG | + | chr4.4:45793298-45793317 | None:intergenic | 25.0% |
| ! | GAAGAATCAAGTATCAATTA+GGG | + | chr4.4:45789436-45789455 | None:intergenic | 25.0% |
| ! | TCATAAAAAGTTCTACTTTC+TGG | - | chr4.4:45794159-45794178 | MS.gene007726:CDS | 25.0% |
| ! | TGATTATTTGTGGTTATGAT+TGG | - | chr4.4:45789456-45789475 | MS.gene007726:CDS | 25.0% |
| ! | TTGATTCTTCTGATTATTTG+TGG | - | chr4.4:45789446-45789465 | MS.gene007726:CDS | 25.0% |
| !! | AACTGTCTACAGATTTTTAT+AGG | - | chr4.4:45791242-45791261 | MS.gene007726:intron | 25.0% |
| !! | AAGTCTTAATTTTATTCACG+AGG | - | chr4.4:45791956-45791975 | MS.gene007726:intron | 25.0% |
| !! | CAAGTTTACCTATTTAACTT+AGG | + | chr4.4:45791165-45791184 | None:intergenic | 25.0% |
| !! | CAGATTTTTATAGGTTTTTG+AGG | - | chr4.4:45791251-45791270 | MS.gene007726:intron | 25.0% |
| !! | TAAGTGTGATTTTCATACAA+AGG | + | chr4.4:45792889-45792908 | None:intergenic | 25.0% |
| !! | TAGTTTTTGCAAAATCACAA+TGG | + | chr4.4:45790869-45790888 | None:intergenic | 25.0% |
| !! | TCATAAACGAGTTTCTAAAA+AGG | - | chr4.4:45794083-45794102 | MS.gene007726:intron | 25.0% |
| !! | TCATTGGAAATTCCTAATTT+TGG | - | chr4.4:45793482-45793501 | MS.gene007726:intron | 25.0% |
| !! | TGATGATCAAATGTTTGTTA+TGG | - | chr4.4:45791204-45791223 | MS.gene007726:intron | 25.0% |
| !! | TGATTTTCATACAAAGGATT+AGG | + | chr4.4:45792883-45792902 | None:intergenic | 25.0% |
| !! | TTGATAATAGAACTGTTCAT+TGG | - | chr4.4:45793466-45793485 | MS.gene007726:intron | 25.0% |
| !!! | ATGATCAAATGTTTGTTATG+GGG | - | chr4.4:45791206-45791225 | MS.gene007726:intron | 25.0% |
| !!! | CATTTTTAGGTTTTACTTTG+GGG | - | chr4.4:45793135-45793154 | MS.gene007726:intron | 25.0% |
| !!! | GATGATCAAATGTTTGTTAT+GGG | - | chr4.4:45791205-45791224 | MS.gene007726:intron | 25.0% |
| !!! | GCATTTTTAGGTTTTACTTT+GGG | - | chr4.4:45793134-45793153 | MS.gene007726:intron | 25.0% |
| !!! | GTCTTCTTTTTTAGATTTCA+AGG | - | chr4.4:45790573-45790592 | MS.gene007726:intron | 25.0% |
| !!! | TGCATTTTTAGGTTTTACTT+TGG | - | chr4.4:45793133-45793152 | MS.gene007726:intron | 25.0% |
| !!! | TTCATAACCAATGCTATTTT+TGG | - | chr4.4:45790522-45790541 | MS.gene007726:intron | 25.0% |
| !!! | TTTCTTTTGAGAAGATAAAG+TGG | - | chr4.4:45792298-45792317 | MS.gene007726:intron | 25.0% |
| AAAAAAGAAGACTGCCTAAA+AGG | + | chr4.4:45790565-45790584 | None:intergenic | 30.0% | |
| AAAGTCTTAACTGAATTAGC+TGG | - | chr4.4:45793824-45793843 | MS.gene007726:intron | 30.0% | |
| AAATTAAAACAGGAAGAGAG+GGG | - | chr4.4:45793198-45793217 | MS.gene007726:intron | 30.0% | |
| AACATGATCAATGTATAGCT+AGG | - | chr4.4:45791652-45791671 | MS.gene007726:intron | 30.0% | |
| AAGGTTCGATAGAATAAAGT+AGG | - | chr4.4:45790592-45790611 | MS.gene007726:intron | 30.0% | |
| AATGTATGTAAGAGTTAGAG+AGG | - | chr4.4:45792733-45792752 | MS.gene007726:CDS | 30.0% | |
| AATTAACTTCTATGACTACG+GGG | + | chr4.4:45793680-45793699 | None:intergenic | 30.0% | |
| AGCCAAATAACAAACTTAAC+AGG | - | chr4.4:45792679-45792698 | MS.gene007726:intron | 30.0% | |
| AGCTGCCATTGTAAAAAAAA+GGG | + | chr4.4:45792457-45792476 | None:intergenic | 30.0% | |
| AGTAAGGAGTTTAGATTAGA+TGG | - | chr4.4:45789838-45789857 | MS.gene007726:intron | 30.0% | |
| AGTTCAATTTCCTGTTAACA+AGG | - | chr4.4:45793931-45793950 | MS.gene007726:CDS | 30.0% | |
| CAAATAACAAACTTAACAGG+AGG | - | chr4.4:45792682-45792701 | MS.gene007726:intron | 30.0% | |
| CAAATTAAAACAGGAAGAGA+GGG | - | chr4.4:45793197-45793216 | MS.gene007726:intron | 30.0% | |
| CAATTAACTTCTATGACTAC+GGG | + | chr4.4:45793681-45793700 | None:intergenic | 30.0% | |
| CTGATATCAAGAAAGAGAAA+AGG | + | chr4.4:45792845-45792864 | None:intergenic | 30.0% | |
| GAAAGACATTACATTGAATG+AGG | + | chr4.4:45790298-45790317 | None:intergenic | 30.0% | |
| GCAATTAACTTCTATGACTA+CGG | + | chr4.4:45793682-45793701 | None:intergenic | 30.0% | |
| GTACAAACCAAAAATAGCAT+TGG | + | chr4.4:45790532-45790551 | None:intergenic | 30.0% | |
| TACCAGTTGTATGATAATTG+TGG | - | chr4.4:45791065-45791084 | MS.gene007726:intron | 30.0% | |
| TAGCTGCCATTGTAAAAAAA+AGG | + | chr4.4:45792458-45792477 | None:intergenic | 30.0% | |
| TAGTCATCATGAGATATTTG+AGG | - | chr4.4:45793433-45793452 | MS.gene007726:intron | 30.0% | |
| TATCTTAACATGCTATAGCT+AGG | - | chr4.4:45791560-45791579 | MS.gene007726:intron | 30.0% | |
| TGATTTAGATATTCAGAGAG+AGG | - | chr4.4:45789497-45789516 | MS.gene007726:intron | 30.0% | |
| TGCATGTTTGATATCACAAT+GGG | + | chr4.4:45790941-45790960 | None:intergenic | 30.0% | |
| TGGAATGCATTATTATTTGC+AGG | - | chr4.4:45793986-45794005 | MS.gene007726:intron | 30.0% | |
| ! | AATAGCTTGTAAGAAGCTTA+TGG | - | chr4.4:45792167-45792186 | MS.gene007726:intron | 30.0% |
| ! | AGCTAATTTTTATAAGCTCC+AGG | - | chr4.4:45792143-45792162 | MS.gene007726:intron | 30.0% |
| ! | GCTAATTTTTATAAGCTCCA+GGG | - | chr4.4:45792144-45792163 | MS.gene007726:intron | 30.0% |
| ! | TAATGAGTTGGATCCAAATA+TGG | - | chr4.4:45789937-45789956 | MS.gene007726:CDS | 30.0% |
| ! | TCATTCTATGGTGTTAATCT+TGG | + | chr4.4:45792516-45792535 | None:intergenic | 30.0% |
| ! | TGGGGATATTTTATATTACC+AGG | - | chr4.4:45791822-45791841 | MS.gene007726:intron | 30.0% |
| ! | TTCATGAAATTGGAAGTATG+TGG | - | chr4.4:45792927-45792946 | MS.gene007726:intron | 30.0% |
| !! | CTCCTGTTAAGTTTGTTATT+TGG | + | chr4.4:45792684-45792703 | None:intergenic | 30.0% |
| !! | TGTTGATGATGAAGAAGAAA+TGG | - | chr4.4:45794028-45794047 | MS.gene007726:intron | 30.0% |
| !! | TTGGTAATGTATTCTGTTTC+AGG | - | chr4.4:45793712-45793731 | MS.gene007726:intron | 30.0% |
| !!! | ATGCTATTTTTGGTTTGTAC+TGG | - | chr4.4:45790532-45790551 | MS.gene007726:intron | 30.0% |
| !!! | CTATAGTTTTTTGAGGTTGA+GGG | - | chr4.4:45791464-45791483 | MS.gene007726:intron | 30.0% |
| !!! | TCTATAGTTTTTTGAGGTTG+AGG | - | chr4.4:45791463-45791482 | MS.gene007726:intron | 30.0% |
| !!! | TTATAGGTTTTTGAGGTTGA+GGG | - | chr4.4:45791258-45791277 | MS.gene007726:intron | 30.0% |
| !!! | TTTATAGGTTTTTGAGGTTG+AGG | - | chr4.4:45791257-45791276 | MS.gene007726:intron | 30.0% |
| AACATTGAACGACAAATTCG+CGG | - | chr4.4:45789381-45789400 | MS.gene007726:intron | 35.0% | |
| AACCTAAAAATGCACCACAA+AGG | + | chr4.4:45793127-45793146 | None:intergenic | 35.0% | |
| AACTCAATATCAATGCACCT+TGG | - | chr4.4:45790745-45790764 | MS.gene007726:intron | 35.0% | |
| AAGAGAATAAGTCAGCAAAG+GGG | - | chr4.4:45792644-45792663 | MS.gene007726:intron | 35.0% | |
| AAGGAGTTTAGATTAGATGG+AGG | - | chr4.4:45789841-45789860 | MS.gene007726:intron | 35.0% | |
| AATTGACTGTGATGTCTGTA+TGG | - | chr4.4:45791490-45791509 | MS.gene007726:intron | 35.0% | |
| ACCATAGAATGACATTGACA+AGG | - | chr4.4:45792524-45792543 | MS.gene007726:intron | 35.0% | |
| ACCTATAGTAGAAAAGATCG+TGG | - | chr4.4:45789763-45789782 | MS.gene007726:intron | 35.0% | |
| ACTTATTCTCTTCTTGACTG+TGG | + | chr4.4:45792636-45792655 | None:intergenic | 35.0% | |
| AGAAAAAGAGAAAGCGAGTT+AGG | - | chr4.4:45791904-45791923 | MS.gene007726:intron | 35.0% | |
| AGAAGAGAATAAGTCAGCAA+AGG | - | chr4.4:45792642-45792661 | MS.gene007726:intron | 35.0% | |
| AGCCACAATTATCATACAAC+TGG | + | chr4.4:45791070-45791089 | None:intergenic | 35.0% | |
| ATCAATGTATAGCTAGGAAC+AGG | - | chr4.4:45791658-45791677 | MS.gene007726:intron | 35.0% | |
| ATGTCTTTCTGCTGAATGTA+AGG | - | chr4.4:45790309-45790328 | MS.gene007726:intron | 35.0% | |
| ATTGACAAGCTTCATAACCT+CGG | + | chr4.4:45793556-45793575 | None:intergenic | 35.0% | |
| CAATCTCTCAATAACTGTTG+CGG | + | chr4.4:45789333-45789352 | None:intergenic | 35.0% | |
| CACACTAAGAGGACAAATTA+AGG | + | chr4.4:45790807-45790826 | None:intergenic | 35.0% | |
| CATAACTGAACTTGACTAGT+AGG | - | chr4.4:45792589-45792608 | MS.gene007726:intron | 35.0% | |
| CCAAATTAAAACAGGAAGAG+AGG | - | chr4.4:45793196-45793215 | MS.gene007726:intron | 35.0% | |
| CCATAGAATGACATTGACAA+GGG | - | chr4.4:45792525-45792544 | MS.gene007726:intron | 35.0% | |
| CGAGTTAGGAAAGATTCTAA+AGG | - | chr4.4:45791918-45791937 | MS.gene007726:intron | 35.0% | |
| CGTTGAATGTGTTGTAATAC+TGG | - | chr4.4:45789692-45789711 | MS.gene007726:CDS | 35.0% | |
| CTAAAAGAGACCAAACAAGA+GGG | - | chr4.4:45791414-45791433 | MS.gene007726:intron | 35.0% | |
| CTATCCCACTTAATGAGATA+AGG | - | chr4.4:45789998-45790017 | MS.gene007726:intron | 35.0% | |
| CTATTAAAGAAGCTGCTAAG+AGG | - | chr4.4:45789538-45789557 | MS.gene007726:intron | 35.0% | |
| CTCATGATGACTAATTGCAA+AGG | + | chr4.4:45793426-45793445 | None:intergenic | 35.0% | |
| CTCTCAAGTCACACTAATTA+TGG | - | chr4.4:45793966-45793985 | MS.gene007726:CDS | 35.0% | |
| CTTATCTCATTAAGTGGGAT+AGG | + | chr4.4:45790000-45790019 | None:intergenic | 35.0% | |
| GAAGAGAATAAGTCAGCAAA+GGG | - | chr4.4:45792643-45792662 | MS.gene007726:intron | 35.0% | |
| GATCTCGAAATAACTAGCAA+AGG | - | chr4.4:45792789-45792808 | MS.gene007726:CDS | 35.0% | |
| GTAAGAGTTAGAGAGGAAAT+TGG | - | chr4.4:45792740-45792759 | MS.gene007726:CDS | 35.0% | |
| GTAGGTAAGAAACCTTTGAT+AGG | - | chr4.4:45792607-45792626 | MS.gene007726:intron | 35.0% | |
| GTGCATGTTTGATATCACAA+TGG | + | chr4.4:45790942-45790961 | None:intergenic | 35.0% | |
| GTTTCAAAAGGCTAGAAGTT+TGG | + | chr4.4:45790252-45790271 | None:intergenic | 35.0% | |
| TAAAAGAGACCAAACAAGAG+GGG | - | chr4.4:45791415-45791434 | MS.gene007726:intron | 35.0% | |
| TAACAGGAGGTAATAGTTGT+GGG | - | chr4.4:45792695-45792714 | MS.gene007726:intron | 35.0% | |
| TAATGTATTCTGTTTCAGGC+AGG | - | chr4.4:45793716-45793735 | MS.gene007726:intron | 35.0% | |
| TATAGCTAGGAACAGGAAAA+GGG | - | chr4.4:45791573-45791592 | MS.gene007726:intron | 35.0% | |
| TCAGGCGTATATATTAGTGT+TGG | - | chr4.4:45792064-45792083 | MS.gene007726:intron | 35.0% | |
| TGTGCACTTAACATGATCAA+TGG | - | chr4.4:45791643-45791662 | MS.gene007726:intron | 35.0% | |
| TTAACAGGAGGTAATAGTTG+TGG | - | chr4.4:45792694-45792713 | MS.gene007726:intron | 35.0% | |
| TTAGTGTGTGTTGGATATCA+TGG | - | chr4.4:45790819-45790838 | MS.gene007726:intron | 35.0% | |
| TTGTAAAAAAAAGGGCAACC+CGG | + | chr4.4:45792449-45792468 | None:intergenic | 35.0% | |
| TTTAATTGACACCTCCTTTG+TGG | - | chr4.4:45793110-45793129 | MS.gene007726:intron | 35.0% | |
| ! | CAAGCCTTATCTCATTAAGT+GGG | + | chr4.4:45790005-45790024 | None:intergenic | 35.0% |
| ! | GACGTGTAGATTTTGTAGTA+AGG | - | chr4.4:45789822-45789841 | MS.gene007726:intron | 35.0% |
| ! | GCACAACTTTTGACAAATCA+CGG | - | chr4.4:45790958-45790977 | MS.gene007726:intron | 35.0% |
| ! | GGGGATAAAATTTTACTGAG+CGG | - | chr4.4:45793154-45793173 | MS.gene007726:intron | 35.0% |
| ! | TACCCAATTGAAGGCATATT+CGG | - | chr4.4:45790403-45790422 | MS.gene007726:intron | 35.0% |
| ! | TCCACGATCTTTTCTACTAT+AGG | + | chr4.4:45789767-45789786 | None:intergenic | 35.0% |
| ! | TGGTGCTTATGCATGTTTTT+GGG | - | chr4.4:45792084-45792103 | MS.gene007726:intron | 35.0% |
| ! | TTTTACAATGGCAGCTATAG+TGG | - | chr4.4:45792461-45792480 | MS.gene007726:intron | 35.0% |
| !! | ATTTTATTCACGAGGCATTC+TGG | - | chr4.4:45791964-45791983 | MS.gene007726:intron | 35.0% |
| !! | TTGGTGCTTATGCATGTTTT+TGG | - | chr4.4:45792083-45792102 | MS.gene007726:intron | 35.0% |
| !! | TTTTATTCACGAGGCATTCT+GGG | - | chr4.4:45791965-45791984 | MS.gene007726:intron | 35.0% |
| !!! | CCTCTCTTCCTGTTTTAATT+TGG | + | chr4.4:45793199-45793218 | None:intergenic | 35.0% |
| !!! | GGTTGCCCTTTTTTTTACAA+TGG | - | chr4.4:45792449-45792468 | MS.gene007726:intron | 35.0% |
| !!! | TTCTAGCCTTTTGAAACAAC+AGG | - | chr4.4:45790255-45790274 | MS.gene007726:intron | 35.0% |
| AAAAAGAGACCAACCTAGAG+GGG | - | chr4.4:45791617-45791636 | MS.gene007726:intron | 40.0% | |
| AACATGCTATAGCTAGGAAC+AGG | - | chr4.4:45791566-45791585 | MS.gene007726:intron | 40.0% | |
| AACTACGCTTTGTGCATGTT+TGG | - | chr4.4:45790884-45790903 | MS.gene007726:intron | 40.0% | |
| ACACCGAATATGCCTTCAAT+TGG | + | chr4.4:45790409-45790428 | None:intergenic | 40.0% | |
| ACCTATTCCACTTAGTCAAC+TGG | + | chr4.4:45791126-45791145 | None:intergenic | 40.0% | |
| AGATCGTGGAAGTTATGCTT+AGG | - | chr4.4:45789777-45789796 | MS.gene007726:intron | 40.0% | |
| AGGCATTCATTCCTTAGTCA+TGG | - | chr4.4:45791842-45791861 | MS.gene007726:intron | 40.0% | |
| AGTACGAGCAATTGCTGAAA+AGG | + | chr4.4:45793511-45793530 | None:intergenic | 40.0% | |
| AGTATGTTTGGTATCGCAGT+GGG | + | chr4.4:45791007-45791026 | None:intergenic | 40.0% | |
| AGTGAGGGCCAAATTAAAAC+AGG | - | chr4.4:45793188-45793207 | MS.gene007726:intron | 40.0% | |
| ATGAAGCACAAGAGCTAACT+TGG | + | chr4.4:45791046-45791065 | None:intergenic | 40.0% | |
| ATGACTAAGGAATGAATGCC+TGG | + | chr4.4:45791843-45791862 | None:intergenic | 40.0% | |
| ATGTGGTCATGTAGAGACTA+GGG | - | chr4.4:45792767-45792786 | MS.gene007726:CDS | 40.0% | |
| ATTCCACTTAGTCAACTGGA+GGG | + | chr4.4:45791122-45791141 | None:intergenic | 40.0% | |
| CAAAAAGAGACCAACCTAGA+GGG | - | chr4.4:45791616-45791635 | MS.gene007726:intron | 40.0% | |
| CAACATAATTGTTCCACTCG+TGG | - | chr4.4:45791517-45791536 | MS.gene007726:intron | 40.0% | |
| CACCGAATATGCCTTCAATT+GGG | + | chr4.4:45790408-45790427 | None:intergenic | 40.0% | |
| CCACTTAATGAGATAAGGCT+TGG | - | chr4.4:45790003-45790022 | MS.gene007726:intron | 40.0% | |
| CCCTTGTCAATGTCATTCTA+TGG | + | chr4.4:45792528-45792547 | None:intergenic | 40.0% | |
| CGCAACAGTTATTGAGAGAT+TGG | - | chr4.4:45789331-45789350 | MS.gene007726:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr4.4:45792383-45792402 | MS.gene007726:intron | 40.0% | |
| CTAAAAATGCACCACAAAGG+AGG | + | chr4.4:45793124-45793143 | None:intergenic | 40.0% | |
| CTAAGCATGTGCTATACCTT+GGG | - | chr4.4:45791359-45791378 | MS.gene007726:intron | 40.0% | |
| CTACAGAACTTGTGAGATCT+AGG | - | chr4.4:45790683-45790702 | MS.gene007726:intron | 40.0% | |
| CTAGGAATTGTTTAGTCTGC+AGG | - | chr4.4:45792239-45792258 | MS.gene007726:intron | 40.0% | |
| CTATAGCTAGGAACAGGAAA+AGG | - | chr4.4:45791572-45791591 | MS.gene007726:intron | 40.0% | |
| CTCAATAACTGTTGCGGATT+TGG | + | chr4.4:45789327-45789346 | None:intergenic | 40.0% | |
| CTGAAAAGGCAGCCAAAATT+AGG | + | chr4.4:45793497-45793516 | None:intergenic | 40.0% | |
| GAAAAGGGTCTTAGCAAAAG+AGG | - | chr4.4:45791588-45791607 | MS.gene007726:intron | 40.0% | |
| GAACCGTCTGCATGAAAATA+AGG | - | chr4.4:45790714-45790733 | MS.gene007726:intron | 40.0% | |
| GAATATGCCTTCAATTGGGT+AGG | + | chr4.4:45790404-45790423 | None:intergenic | 40.0% | |
| GATATCCAACACACACTAAG+AGG | + | chr4.4:45790818-45790837 | None:intergenic | 40.0% | |
| GCAGACTAAACAATTCCTAG+AGG | + | chr4.4:45792239-45792258 | None:intergenic | 40.0% | |
| GCAGGAGAAATGAAGTATGA+AGG | + | chr4.4:45793647-45793666 | None:intergenic | 40.0% | |
| GCTAAAAGAGACCAAACAAG+AGG | - | chr4.4:45791413-45791432 | MS.gene007726:intron | 40.0% | |
| GCTTGTCAATAACCTCATGA+AGG | - | chr4.4:45793566-45793585 | MS.gene007726:intron | 40.0% | |
| GGATCTCGAAATAACTAGCA+AGG | - | chr4.4:45792788-45792807 | MS.gene007726:CDS | 40.0% | |
| GGCATTCATTCCTTAGTCAT+GGG | - | chr4.4:45791843-45791862 | MS.gene007726:intron | 40.0% | |
| GTATAGCTAGGAACAGGAAA+AGG | - | chr4.4:45791664-45791683 | MS.gene007726:intron | 40.0% | |
| GTGATCGGTCTTAACATGTA+TGG | + | chr4.4:45790378-45790397 | None:intergenic | 40.0% | |
| GTTCAGCAAAGAAATGACCA+AGG | - | chr4.4:45793617-45793636 | MS.gene007726:intron | 40.0% | |
| TATACCTTGGGACAGGAAAA+GGG | - | chr4.4:45791371-45791390 | MS.gene007726:intron | 40.0% | |
| TATGTGGTCATGTAGAGACT+AGG | - | chr4.4:45792766-45792785 | MS.gene007726:CDS | 40.0% | |
| TATTCCACTTAGTCAACTGG+AGG | + | chr4.4:45791123-45791142 | None:intergenic | 40.0% | |
| TCCAGTTGACTAAGTGGAAT+AGG | - | chr4.4:45791122-45791141 | MS.gene007726:intron | 40.0% | |
| TCTAAGCATGTGCTATACCT+TGG | - | chr4.4:45791358-45791377 | MS.gene007726:intron | 40.0% | |
| TCTTTCTGCTGAATGTAAGG+TGG | - | chr4.4:45790312-45790331 | MS.gene007726:intron | 40.0% | |
| TGAAGCTGTGAGGAAACAAA+AGG | - | chr4.4:45793868-45793887 | MS.gene007726:intron | 40.0% | |
| TGACTCAGCATTAGATTCTG+AGG | - | chr4.4:45793769-45793788 | MS.gene007726:intron | 40.0% | |
| TGCTGAATGTAAGGTGGAAT+AGG | - | chr4.4:45790318-45790337 | MS.gene007726:intron | 40.0% | |
| TGGCTAAGTCATGCATTGTT+TGG | - | chr4.4:45793241-45793260 | MS.gene007726:intron | 40.0% | |
| TTCTTCATCATCAACACCCT+CGG | + | chr4.4:45794024-45794043 | None:intergenic | 40.0% | |
| TTTACAATGGCGGCTATACA+GGG | - | chr4.4:45792352-45792371 | MS.gene007726:intron | 40.0% | |
| TTTGTCCTCTTAGTGTGTGT+TGG | - | chr4.4:45790810-45790829 | MS.gene007726:intron | 40.0% | |
| ! | AACTGTTGCGGATTTGGTTT+CGG | + | chr4.4:45789321-45789340 | None:intergenic | 40.0% |
| ! | AATCACATGTGTCGATGTGT+CGG | - | chr4.4:45790036-45790055 | MS.gene007726:intron | 40.0% |
| ! | AATGGCAGCTATAGTGGTTT+TGG | - | chr4.4:45792467-45792486 | MS.gene007726:intron | 40.0% |
| ! | ATGGCAGCTATAGTGGTTTT+GGG | - | chr4.4:45792468-45792487 | MS.gene007726:intron | 40.0% |
| ! | CAACTTTTGACAAATCACGG+TGG | - | chr4.4:45790961-45790980 | MS.gene007726:intron | 40.0% |
| ! | CCAAGCCTTATCTCATTAAG+TGG | + | chr4.4:45790006-45790025 | None:intergenic | 40.0% |
| ! | CTCCTTTGTGGTGCATTTTT+AGG | - | chr4.4:45793122-45793141 | MS.gene007726:intron | 40.0% |
| ! | GAGAGGAAATTGGAAGTATG+TGG | - | chr4.4:45792750-45792769 | MS.gene007726:CDS | 40.0% |
| ! | GGGGAGCTTATTGAAAGTAT+TGG | - | chr4.4:45792105-45792124 | MS.gene007726:intron | 40.0% |
| ! | TAGCTTGTACAGGTCCATTT+GGG | - | chr4.4:45792021-45792040 | MS.gene007726:intron | 40.0% |
| ! | TGAAGTATGAAGGCATACCT+TGG | + | chr4.4:45793637-45793656 | None:intergenic | 40.0% |
| ! | TTCTAAAGACTGAGCTTCTG+AGG | - | chr4.4:45791877-45791896 | MS.gene007726:intron | 40.0% |
| !! | CAATGGGTTTGCTAGAATCA+CGG | + | chr4.4:45790925-45790944 | None:intergenic | 40.0% |
| !! | CCAACACCTGTTGTTTCAAA+AGG | + | chr4.4:45790264-45790283 | None:intergenic | 40.0% |
| !! | GAATGACATTGGTTCTGCAA+AGG | - | chr4.4:45789560-45789579 | MS.gene007726:intron | 40.0% |
| !! | GCAAAAAGAGCCTTGTTAAC+AGG | + | chr4.4:45793944-45793963 | None:intergenic | 40.0% |
| !! | GGTGCTTATGCATGTTTTTG+GGG | - | chr4.4:45792085-45792104 | MS.gene007726:intron | 40.0% |
| !! | GTACTGGTGTATCACCTTTT+AGG | - | chr4.4:45790548-45790567 | MS.gene007726:intron | 40.0% |
| !! | TGGCACACAATCTTTAGGAT+AGG | - | chr4.4:45791537-45791556 | MS.gene007726:intron | 40.0% |
| !! | TTTTGTTTCCTCACAGCTTC+AGG | + | chr4.4:45793869-45793888 | None:intergenic | 40.0% |
| !!! | CCTTTTGAAACAACAGGTGT+TGG | - | chr4.4:45790261-45790280 | MS.gene007726:intron | 40.0% |
| !!! | GAGAAAGTGTTGGTAGGTTT+TGG | - | chr4.4:45790767-45790786 | MS.gene007726:intron | 40.0% |
| !!! | GTGCCTTATTTTCATGCAGA+CGG | + | chr4.4:45790720-45790739 | None:intergenic | 40.0% |
| !!! | GTGCTTATGCATGTTTTTGG+GGG | - | chr4.4:45792086-45792105 | MS.gene007726:intron | 40.0% |
| AAAACAGGAAGAGAGGGGAA+AGG | - | chr4.4:45793203-45793222 | MS.gene007726:intron | 45.0% | |
| AAACAGGAAGAGAGGGGAAA+GGG | - | chr4.4:45793204-45793223 | MS.gene007726:intron | 45.0% | |
| AATAAGTCAGCAAAGGGGCA+GGG | - | chr4.4:45792649-45792668 | MS.gene007726:intron | 45.0% | |
| ACAATGGCAATCCGTGATTC+TGG | + | chr4.4:45790853-45790872 | None:intergenic | 45.0% | |
| ACCAATCTCCAGCTCGTATA+TGG | - | chr4.4:45791789-45791808 | MS.gene007726:intron | 45.0% | |
| ACCTACCAACACTTTCTCCA+AGG | + | chr4.4:45790765-45790784 | None:intergenic | 45.0% | |
| ACGCCTGAATAAGCTACTCA+TGG | + | chr4.4:45792052-45792071 | None:intergenic | 45.0% | |
| ACTCGTGGCACACAATCTTT+AGG | - | chr4.4:45791532-45791551 | MS.gene007726:intron | 45.0% | |
| ACTCTTTGCACACAGTCTCT+AGG | - | chr4.4:45791328-45791347 | MS.gene007726:intron | 45.0% | |
| AGAGACTGTGTGCAAAGAGT+GGG | + | chr4.4:45791328-45791347 | None:intergenic | 45.0% | |
| AGCAAAAAGAGCCAACCTAG+AGG | - | chr4.4:45791706-45791725 | MS.gene007726:intron | 45.0% | |
| AGCGGTTTACAAGTCAAGTG+AGG | - | chr4.4:45793172-45793191 | MS.gene007726:intron | 45.0% | |
| CAAAAAGAGCCAACCTAGAG+GGG | - | chr4.4:45791708-45791727 | MS.gene007726:intron | 45.0% | |
| CAATCTCCAGCTCGTATATG+GGG | - | chr4.4:45791791-45791810 | MS.gene007726:intron | 45.0% | |
| CAATTGGGTAGGACTGTGAT+CGG | + | chr4.4:45790393-45790412 | None:intergenic | 45.0% | |
| CATTGACAAGGGTTGCTGTA+TGG | - | chr4.4:45792536-45792555 | MS.gene007726:intron | 45.0% | |
| CCAATCTCCAGCTCGTATAT+GGG | - | chr4.4:45791790-45791809 | MS.gene007726:intron | 45.0% | |
| CGACATTAGAGAGAGAGATC+AGG | - | chr4.4:45789736-45789755 | MS.gene007726:CDS | 45.0% | |
| CGTGCTCATCATGTGTAGTT+AGG | + | chr4.4:45792215-45792234 | None:intergenic | 45.0% | |
| CTATACCTTGGGACAGGAAA+AGG | - | chr4.4:45791370-45791389 | MS.gene007726:intron | 45.0% | |
| CTTTACAATGGCGGCTATAC+AGG | - | chr4.4:45792351-45792370 | MS.gene007726:intron | 45.0% | |
| GAAAAGGGTCTTAGCGAAAG+AGG | - | chr4.4:45791386-45791405 | MS.gene007726:intron | 45.0% | |
| GAGGATAGTCAGATCACTAG+AGG | - | chr4.4:45789860-45789879 | MS.gene007726:intron | 45.0% | |
| GAGTATGTTTGGTATCGCAG+TGG | + | chr4.4:45791008-45791027 | None:intergenic | 45.0% | |
| GCAAAAAGAGACCAACCTAG+AGG | - | chr4.4:45791615-45791634 | MS.gene007726:intron | 45.0% | |
| GCAAAAAGAGCCAACCTAGA+GGG | - | chr4.4:45791707-45791726 | MS.gene007726:intron | 45.0% | |
| GCGGTTTACAAGTCAAGTGA+GGG | - | chr4.4:45793173-45793192 | MS.gene007726:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr4.4:45792382-45792401 | MS.gene007726:intron | 45.0% | |
| GCTCTGACACACACAAAAAC+AGG | + | chr4.4:45790502-45790521 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr4.4:45792379-45792398 | MS.gene007726:intron | 45.0% | |
| GCTGCTAAGAGGAATGACAT+TGG | - | chr4.4:45789549-45789568 | MS.gene007726:intron | 45.0% | |
| GCTTCTTACAAGCTATTCCC+TGG | + | chr4.4:45792164-45792183 | None:intergenic | 45.0% | |
| GGTCCATGAGTAGCTTATTC+AGG | - | chr4.4:45792046-45792065 | MS.gene007726:intron | 45.0% | |
| GTAATAGTTGTGGGTAGCAG+AGG | - | chr4.4:45792704-45792723 | MS.gene007726:intron | 45.0% | |
| GTGCATGTTTGGTATCACAG+TGG | - | chr4.4:45790895-45790914 | MS.gene007726:intron | 45.0% | |
| GTGTGTGTTGGATATCATGG+TGG | - | chr4.4:45790822-45790841 | MS.gene007726:intron | 45.0% | |
| GTTTCAGGCAGGAGTAATTG+AGG | - | chr4.4:45793727-45793746 | MS.gene007726:intron | 45.0% | |
| TAAAGATTGTGTGCCACGAG+TGG | + | chr4.4:45791533-45791552 | None:intergenic | 45.0% | |
| TACTCATGGACCAACCCAAA+TGG | + | chr4.4:45791992-45792011 | None:intergenic | 45.0% | |
| TAGAGACTGTGTGCAAAGAG+TGG | + | chr4.4:45791329-45791348 | None:intergenic | 45.0% | |
| TCACAGTCCTACCCAATTGA+AGG | - | chr4.4:45790394-45790413 | MS.gene007726:intron | 45.0% | |
| TCAGCAATTGCTCGTACTGT+GGG | - | chr4.4:45793513-45793532 | MS.gene007726:intron | 45.0% | |
| TCGTGGAAGTTATGCTTAGG+TGG | - | chr4.4:45789780-45789799 | MS.gene007726:intron | 45.0% | |
| TGACTGTGGAAGCCTATCAA+AGG | + | chr4.4:45792622-45792641 | None:intergenic | 45.0% | |
| TGCATAGCAACAGCCATTTC+AGG | + | chr4.4:45793594-45793613 | None:intergenic | 45.0% | |
| TTCAGCAATTGCTCGTACTG+TGG | - | chr4.4:45793512-45793531 | MS.gene007726:intron | 45.0% | |
| TTGAGATCTGTCACTGACAC+CGG | - | chr4.4:45789602-45789621 | MS.gene007726:CDS | 45.0% | |
| TTGTACAGGTCCATTTGGGT+TGG | - | chr4.4:45792025-45792044 | MS.gene007726:intron | 45.0% | |
| ! | AGCTACTCATGGACTACTCA+TGG | + | chr4.4:45792006-45792025 | None:intergenic | 45.0% |
| ! | AGTCCATGAGTAGCTTGTAC+AGG | - | chr4.4:45792011-45792030 | MS.gene007726:intron | 45.0% |
| ! | ATGCACCTTGGAGAAAGTGT+TGG | - | chr4.4:45790757-45790776 | MS.gene007726:intron | 45.0% |
| ! | GCACTGACAGTTCTAATCGA+AGG | + | chr4.4:45790111-45790130 | None:intergenic | 45.0% |
| ! | GTAGCTTGTACAGGTCCATT+TGG | - | chr4.4:45792020-45792039 | MS.gene007726:intron | 45.0% |
| !! | ACATCTATCAAAGAGTGCCG+AGG | - | chr4.4:45793536-45793555 | MS.gene007726:intron | 45.0% |
| !! | ACCTTGGAGAAAGTGTTGGT+AGG | - | chr4.4:45790761-45790780 | MS.gene007726:intron | 45.0% |
| !! | CATATTCGGTGTCAGACATG+TGG | - | chr4.4:45790417-45790436 | MS.gene007726:intron | 45.0% |
| !! | TGGCAGCTATAGTGGTTTTG+GGG | - | chr4.4:45792469-45792488 | MS.gene007726:intron | 45.0% |
| !! | TGGTGGATTTGCCAGAATCA+CGG | - | chr4.4:45790839-45790858 | MS.gene007726:intron | 45.0% |
| !! | TTGCACACAGTCTCTAGGAT+AGG | - | chr4.4:45791333-45791352 | MS.gene007726:intron | 45.0% |
| AACTGCATGTACCTCCTCTG+CGG | + | chr4.4:45793915-45793934 | None:intergenic | 50.0% | |
| AATGGCGGCTATACAGGGTA+AGG | - | chr4.4:45792357-45792376 | MS.gene007726:intron | 50.0% | |
| ACATGATGAGCACGACCTCT+AGG | - | chr4.4:45792221-45792240 | MS.gene007726:intron | 50.0% | |
| ACTCCCTCCAGTTGACTAAG+TGG | - | chr4.4:45791116-45791135 | MS.gene007726:intron | 50.0% | |
| ACTTCTATGACTACGGGGAG+AGG | + | chr4.4:45793675-45793694 | None:intergenic | 50.0% | |
| AGGGTCTTAGCGAAAGAGGT+AGG | - | chr4.4:45791390-45791409 | MS.gene007726:intron | 50.0% | |
| ATTAGAGCTCCCGCATATGC+AGG | + | chr4.4:45792423-45792442 | None:intergenic | 50.0% | |
| CAACACTAACACGTCAACGC+TGG | + | chr4.4:45790476-45790495 | None:intergenic | 50.0% | |
| CACAACTTCCTGAAGCTGTG+AGG | - | chr4.4:45793858-45793877 | MS.gene007726:intron | 50.0% | |
| CACAGCTTCAGGAAGTTGTG+CGG | + | chr4.4:45793858-45793877 | None:intergenic | 50.0% | |
| CAGATGCTCACCCATGACTA+AGG | + | chr4.4:45791856-45791875 | None:intergenic | 50.0% | |
| CAGGAAGATGCTATAGCCGA+GGG | - | chr4.4:45794005-45794024 | MS.gene007726:intron | 50.0% | |
| CATGTGCTATACCTTGGGAC+AGG | - | chr4.4:45791364-45791383 | MS.gene007726:intron | 50.0% | |
| CATTCTGGGTGCATTTGGGT+TGG | - | chr4.4:45791979-45791998 | MS.gene007726:intron | 50.0% | |
| CCATTTCAGGAGCCTTCATG+AGG | + | chr4.4:45793581-45793600 | None:intergenic | 50.0% | |
| CCCATATACGAGCTGGAGAT+TGG | + | chr4.4:45791793-45791812 | None:intergenic | 50.0% | |
| CCTCATGAAGGCTCCTGAAA+TGG | - | chr4.4:45793578-45793597 | MS.gene007726:intron | 50.0% | |
| CGTATATGGGGAAGGGGAAT+GGG | - | chr4.4:45791803-45791822 | MS.gene007726:intron | 50.0% | |
| GAATAAGTCAGCAAAGGGGC+AGG | - | chr4.4:45792648-45792667 | MS.gene007726:intron | 50.0% | |
| GGACCTGTACAAGCTACTCA+TGG | + | chr4.4:45792017-45792036 | None:intergenic | 50.0% | |
| GGGTCTTAGCGAAAGAGGTA+GGG | - | chr4.4:45791391-45791410 | MS.gene007726:intron | 50.0% | |
| GTATATGGGGAAGGGGAATG+GGG | - | chr4.4:45791804-45791823 | MS.gene007726:intron | 50.0% | |
| TCCAGCTCGTATATGGGGAA+GGG | - | chr4.4:45791796-45791815 | MS.gene007726:intron | 50.0% | |
| TCGTATATGGGGAAGGGGAA+TGG | - | chr4.4:45791802-45791821 | MS.gene007726:intron | 50.0% | |
| TCTGTCACTGACACCGGATA+CGG | - | chr4.4:45789608-45789627 | MS.gene007726:CDS | 50.0% | |
| TGACCTGACTTTAGCGAGTC+TGG | + | chr4.4:45794066-45794085 | None:intergenic | 50.0% | |
| TTAGAGCTCCCGCATATGCA+GGG | + | chr4.4:45792422-45792441 | None:intergenic | 50.0% | |
| ! | AAGACCCTTTTCCTGTCCCA+AGG | + | chr4.4:45791378-45791397 | None:intergenic | 50.0% |
| ! | ACGGTGGCTCACTGTGATTT+TGG | - | chr4.4:45790977-45790996 | MS.gene007726:intron | 50.0% |
| ! | GACAGTTCTAATCGAAGGCG+TGG | + | chr4.4:45790106-45790125 | None:intergenic | 50.0% |
| ! | GAGGCATTCTGGGTGCATTT+GGG | - | chr4.4:45791975-45791994 | MS.gene007726:intron | 50.0% |
| !!! | GCTATAGTGGTTTTGGGGTC+TGG | - | chr4.4:45792474-45792493 | MS.gene007726:intron | 50.0% |
| CCAGCTCGTATATGGGGAAG+GGG | - | chr4.4:45791797-45791816 | MS.gene007726:intron | 55.0% | |
| CTCCAGCTCGTATATGGGGA+AGG | - | chr4.4:45791795-45791814 | MS.gene007726:intron | 55.0% | |
| GCAGGAAGATGCTATAGCCG+AGG | - | chr4.4:45794004-45794023 | MS.gene007726:intron | 55.0% | |
| GGGGCTTCTGCGACTTTCTA+CGG | - | chr4.4:45791434-45791453 | MS.gene007726:intron | 55.0% | |
| GTGAGTGTCAGTGCCGTATC+CGG | + | chr4.4:45789624-45789643 | None:intergenic | 55.0% | |
| TAAGTGCACACAGCCCCTCT+AGG | + | chr4.4:45791633-45791652 | None:intergenic | 55.0% | |
| TCGCAGAAGCCCCTCTTGTT+TGG | + | chr4.4:45791427-45791446 | None:intergenic | 55.0% | |
| ! | ATGCGGGAGCTCTAATGCAC+CGG | - | chr4.4:45792427-45792446 | MS.gene007726:intron | 55.0% |
| ! | CGAGGCATTCTGGGTGCATT+TGG | - | chr4.4:45791974-45791993 | MS.gene007726:intron | 55.0% |
| ! | GTTCTAATCGAAGGCGTGGC+TGG | + | chr4.4:45790102-45790121 | None:intergenic | 55.0% |
| !! | AAAGGGTGCTTGGGGGTAAC+TGG | - | chr4.4:45793221-45793240 | MS.gene007726:intron | 55.0% |
| !! | AAGAGAGGGGAAAGGGTGCT+TGG | - | chr4.4:45793211-45793230 | MS.gene007726:intron | 55.0% |
| !! | AGAGAGGGGAAAGGGTGCTT+GGG | - | chr4.4:45793212-45793231 | MS.gene007726:intron | 55.0% |
| CATATGCAGGGTCCGGGAAG+GGG | + | chr4.4:45792410-45792429 | None:intergenic | 60.0% | |
| CCCCTTCCCCATATACGAGC+TGG | + | chr4.4:45791800-45791819 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | - | chr4.4:45792410-45792429 | MS.gene007726:intron | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | + | chr4.4:45792411-45792430 | None:intergenic | 60.0% | |
| GGGCCAGACTCGCTAAAGTC+AGG | - | chr4.4:45794060-45794079 | MS.gene007726:intron | 60.0% | |
| TCCTCTGCGGCACTTTGAGC+AGG | + | chr4.4:45793902-45793921 | None:intergenic | 60.0% | |
| TGCACACAGCCCCTCTAGGT+TGG | + | chr4.4:45791629-45791648 | None:intergenic | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | - | chr4.4:45792411-45792430 | MS.gene007726:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr4.4:45792395-45792414 | MS.gene007726:intron | 60.0% |
| ! | TGCGGGAGCTCTAATGCACC+GGG | - | chr4.4:45792428-45792447 | MS.gene007726:intron | 60.0% |
| !! | ACCTGCTCAAAGTGCCGCAG+AGG | - | chr4.4:45793898-45793917 | MS.gene007726:intron | 60.0% |
| !! | AGAGGGGAAAGGGTGCTTGG+GGG | - | chr4.4:45793214-45793233 | MS.gene007726:intron | 60.0% |
| !! | GAGAGGGGAAAGGGTGCTTG+GGG | - | chr4.4:45793213-45793232 | MS.gene007726:intron | 60.0% |
| !! | TGCTCAAAGTGCCGCAGAGG+AGG | - | chr4.4:45793901-45793920 | MS.gene007726:intron | 60.0% |
| CGCATATGCAGGGTCCGGGA+AGG | + | chr4.4:45792412-45792431 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr4.4:45792397-45792416 | None:intergenic | 65.0% | |
| CTACGGGGAGAGGAGAGAGC+AGG | + | chr4.4:45793665-45793684 | None:intergenic | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | + | chr4.4:45792416-45792435 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | + | chr4.4:45792417-45792436 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 45789291 | 45794213 | 45789291 | ID=MS.gene007726 |
| chr4.4 | mRNA | 45789291 | 45794213 | 45789291 | ID=MS.gene007726.t1;Parent=MS.gene007726 |
| chr4.4 | exon | 45794102 | 45794213 | 45794102 | ID=MS.gene007726.t1.exon1;Parent=MS.gene007726.t1 |
| chr4.4 | CDS | 45794102 | 45794213 | 45794102 | ID=cds.MS.gene007726.t1;Parent=MS.gene007726.t1 |
| chr4.4 | exon | 45793923 | 45793999 | 45793923 | ID=MS.gene007726.t1.exon2;Parent=MS.gene007726.t1 |
| chr4.4 | CDS | 45793923 | 45793999 | 45793923 | ID=cds.MS.gene007726.t1;Parent=MS.gene007726.t1 |
| chr4.4 | exon | 45792726 | 45792828 | 45792726 | ID=MS.gene007726.t1.exon3;Parent=MS.gene007726.t1 |
| chr4.4 | CDS | 45792726 | 45792828 | 45792726 | ID=cds.MS.gene007726.t1;Parent=MS.gene007726.t1 |
| chr4.4 | exon | 45789866 | 45789987 | 45789866 | ID=MS.gene007726.t1.exon4;Parent=MS.gene007726.t1 |
| chr4.4 | CDS | 45789866 | 45789987 | 45789866 | ID=cds.MS.gene007726.t1;Parent=MS.gene007726.t1 |
| chr4.4 | exon | 45789582 | 45789770 | 45789582 | ID=MS.gene007726.t1.exon5;Parent=MS.gene007726.t1 |
| chr4.4 | CDS | 45789582 | 45789770 | 45789582 | ID=cds.MS.gene007726.t1;Parent=MS.gene007726.t1 |
| chr4.4 | exon | 45789423 | 45789496 | 45789423 | ID=MS.gene007726.t1.exon6;Parent=MS.gene007726.t1 |
| chr4.4 | CDS | 45789423 | 45789496 | 45789423 | ID=cds.MS.gene007726.t1;Parent=MS.gene007726.t1 |
| chr4.4 | exon | 45789291 | 45789309 | 45789291 | ID=MS.gene007726.t1.exon7;Parent=MS.gene007726.t1 |
| chr4.4 | CDS | 45789291 | 45789309 | 45789291 | ID=cds.MS.gene007726.t1;Parent=MS.gene007726.t1 |
| Gene Sequence |
| Protein sequence |
