AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene033909

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033909.t1 MTR_2g047875 100.000 196 0 0 1 196 21 216 1.95e-139 388
MS.gene033909.t1 MTR_1g069715 73.711 194 47 1 1 194 486 675 5.87e-98 298
MS.gene033909.t1 MTR_7g097170 76.804 194 41 1 1 194 21 210 2.04e-92 269
MS.gene033909.t1 MTR_2g041190 40.201 199 113 1 4 196 25 223 2.48e-34 121
MS.gene033909.t1 MTR_8g019700 44.516 155 86 0 4 158 25 179 1.60e-32 117
MS.gene033909.t1 MTR_4g057565 28.788 198 133 1 5 194 29 226 2.31e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033909.t1 AT5G44560 83.168 202 28 1 1 196 1 202 1.01e-115 327
MS.gene033909.t1 AT5G44560 83.168 202 28 1 1 196 21 222 1.99e-115 327
MS.gene033909.t1 AT5G44560 88.608 158 18 0 1 158 21 178 1.01e-99 286
MS.gene033909.t1 AT1G03950 72.165 194 50 1 1 194 21 210 8.59e-99 285
MS.gene033909.t1 AT5G44560 83.077 130 22 0 1 130 21 150 6.26e-74 220
MS.gene033909.t1 AT2G06530 40.500 200 112 1 4 196 5 204 5.52e-37 127
MS.gene033909.t1 AT2G06530 40.500 200 112 1 4 196 26 225 8.86e-37 127

Find 42 sgRNAs with CRISPR-Local

Find 355 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGACAGGTTCTTGATGAAAT+TGG 0.228952 2.2:+39241615 MS.gene033909:intron
CATTGCCACCATTGCTTTAG+TGG 0.261194 2.2:-39239498 None:intergenic
CCAGTTGTGCTGATTGCTTT+TGG 0.285128 2.2:-39240106 None:intergenic
TTTCAAGTTCTTCAACATCT+TGG 0.321093 2.2:-39242061 None:intergenic
ATCACTTTAGCCTGCTTTGC+CGG 0.327935 2.2:-39240074 None:intergenic
AGCAATGGTGGCAATGAATA+AGG 0.349876 2.2:+39239505 MS.gene033909:CDS
TTCAAGTTCTTCAACATCTT+GGG 0.356079 2.2:-39242060 None:intergenic
AGGGAAGTCGTGCACAGATC+AGG 0.381377 2.2:+39239332 MS.gene033909:CDS
CTTGAAGCAATCCGACCTTT+CGG 0.382816 2.2:-39241908 None:intergenic
TGAAGAACTTGAAAAGAGAT+TGG 0.400428 2.2:+39242070 MS.gene033909:CDS
TCCTGGCTCGGCAGCTAGTT+AGG 0.403556 2.2:+39239284 MS.gene033909:CDS
CCAAAAGCAATCAGCACAAC+TGG 0.415296 2.2:+39240106 MS.gene033909:CDS
GCAAGCACTTCAATCTCTAC+AGG 0.426499 2.2:+39239464 MS.gene033909:CDS
CGAAAGGTCGGATTGCTTCA+AGG 0.442942 2.2:+39241909 MS.gene033909:CDS
TTCAATCTCTACAGGGATGA+AGG 0.458265 2.2:+39239472 MS.gene033909:CDS
TGGAGTGGATATTGCATCCC+AGG 0.474380 2.2:+39241635 MS.gene033909:CDS
ACCTAACTAGCTGCCGAGCC+AGG 0.485867 2.2:-39239285 None:intergenic
GCAAATGGCACCGGCAAAGC+AGG 0.491669 2.2:+39240064 MS.gene033909:intron
CCTGCAGATTAGTTATCTGT+TGG 0.504006 2.2:-39239312 None:intergenic
CCAACAGATAACTAATCTGC+AGG 0.509427 2.2:+39239312 MS.gene033909:CDS
GGGAAGTCGTGCACAGATCA+GGG 0.524632 2.2:+39239333 MS.gene033909:CDS
AGAGATAGCATCACTTCAGA+TGG 0.527919 2.2:+39237042 MS.gene033909:CDS
ACAGGCTTCTACTAAAATCC+TGG 0.535270 2.2:+39239267 MS.gene033909:intron
ATCTTCTCAGCAAATGGCAC+CGG 0.537436 2.2:+39240055 MS.gene033909:intron
AGTTGCAGAGATTAAAAGAG+AGG 0.544597 2.2:+39237165 MS.gene033909:CDS
GAAATGTCTGTTGCAACTAG+AGG 0.569526 2.2:+39236127 None:intergenic
TCAATCTCTACAGGGATGAA+GGG 0.583879 2.2:+39239473 MS.gene033909:CDS
TATCTTCTGCTCCGAAAGGT+CGG 0.586806 2.2:+39241897 MS.gene033909:CDS
CTTCTACTAAAATCCTGGCT+CGG 0.598970 2.2:+39239272 MS.gene033909:CDS
GGTTCTTGATGAAATTGGAG+TGG 0.601589 2.2:+39241620 MS.gene033909:intron
ATGCTGAAAATGCTGCTCCA+AGG 0.612137 2.2:+39241933 MS.gene033909:CDS
CAAGCACTTCAATCTCTACA+GGG 0.614124 2.2:+39239465 MS.gene033909:CDS
GATAGCATCACTTCAGATGG+AGG 0.618277 2.2:+39237045 MS.gene033909:CDS
ATCAGCACAACTGGACATGA+CGG 0.620669 2.2:+39240115 MS.gene033909:CDS
GGGTGCCACTAAAGCAATGG+TGG 0.624027 2.2:+39239493 MS.gene033909:CDS
GAAGGGTGCCACTAAAGCAA+TGG 0.625367 2.2:+39239490 MS.gene033909:CDS
ATCAGAAGAACTCACTAACC+AGG 0.628471 2.2:+39241499 MS.gene033909:CDS
TAGTTATCTTCTGCTCCGAA+AGG 0.634306 2.2:+39241893 MS.gene033909:intron
TTTAGACAAAGATGAAGCTG+AGG 0.636787 2.2:+39241472 MS.gene033909:CDS
GGAAGTCGTGCACAGATCAG+GGG 0.664483 2.2:+39239334 MS.gene033909:CDS
GGGTGTAGCAACTCACACAC+AGG 0.671175 2.2:+39239354 MS.gene033909:CDS
CAACAGATAACTAATCTGCA+GGG 0.676896 2.2:+39239313 MS.gene033909:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTCATATATAAAATCAAA+TGG - chr2.2:39236256-39236275 None:intergenic 10.0%
!!! AACTTTTATGAAAATTTTTA+CGG + chr2.2:39240340-39240359 MS.gene033909:intron 10.0%
!!! TAATTACTTTTATGAATATT+GGG + chr2.2:39241843-39241862 MS.gene033909:intron 10.0%
!!! TTAATTACTTTTATGAATAT+TGG + chr2.2:39241842-39241861 MS.gene033909:intron 10.0%
!!! TTTTATTTAGATGTATATTT+GGG + chr2.2:39237242-39237261 MS.gene033909:intron 10.0%
!!! TTTTTATTTAGATGTATATT+TGG + chr2.2:39237241-39237260 MS.gene033909:intron 10.0%
!! ATATATATAATCTAATGCTA+TGG - chr2.2:39241295-39241314 None:intergenic 15.0%
!! ATGATAAATATTTGTATGTT+TGG - chr2.2:39237449-39237468 None:intergenic 15.0%
!! CATTAAAAAAAAACAGTTAA+AGG + chr2.2:39236690-39236709 MS.gene033909:intron 15.0%
!! TAAATAAATAGATTTCTAAC+TGG - chr2.2:39238973-39238992 None:intergenic 15.0%
!!! CAATTATTAGTCTTTTTTTT+TGG + chr2.2:39240278-39240297 MS.gene033909:intron 15.0%
!!! CATTATTTTAAGGTATTATA+AGG - chr2.2:39236341-39236360 None:intergenic 15.0%
!!! CTTTAACTGTTTTTTTTTAA+TGG - chr2.2:39236692-39236711 None:intergenic 15.0%
!!! TAATTTTTTCCTATTTAGAA+AGG - chr2.2:39236318-39236337 None:intergenic 15.0%
!!! TTTTTTTTTCCTTTCTAAAT+AGG + chr2.2:39236306-39236325 MS.gene033909:intron 15.0%
!! AAAAATTGAATTTCAAGCTA+TGG - chr2.2:39238139-39238158 None:intergenic 20.0%
!! AAATATTTGTATGTTTGGAT+TGG - chr2.2:39237444-39237463 None:intergenic 20.0%
!! AATAAGATTGAAATATACCT+TGG - chr2.2:39241953-39241972 None:intergenic 20.0%
!! AATAATGAAATTGAAGAGTA+TGG + chr2.2:39240526-39240545 MS.gene033909:intron 20.0%
!! ACTATAGTTAAAGATTGTAT+TGG - chr2.2:39237719-39237738 None:intergenic 20.0%
!! ATAAACTAGGAGTTAAATAA+AGG + chr2.2:39240470-39240489 MS.gene033909:intron 20.0%
!! ATTTAGAGGAGAATTATATA+GGG - chr2.2:39238740-39238759 None:intergenic 20.0%
!! GACTAACATAATGAAATATT+GGG - chr2.2:39241672-39241691 None:intergenic 20.0%
!! GATCGTTTAAATACAAAAAT+TGG - chr2.2:39237775-39237794 None:intergenic 20.0%
!! GTAAGAACTAAAATAAGTAA+GGG + chr2.2:39240843-39240862 MS.gene033909:intron 20.0%
!! GTATATTTCAATCTTATTCA+TGG + chr2.2:39241955-39241974 MS.gene033909:intron 20.0%
!! TCATTATCAATATTCATGAA+TGG - chr2.2:39238374-39238393 None:intergenic 20.0%
!! TGACTAACATAATGAAATAT+TGG - chr2.2:39241673-39241692 None:intergenic 20.0%
!! TGTAAGAACTAAAATAAGTA+AGG + chr2.2:39240842-39240861 MS.gene033909:intron 20.0%
!! TTAAGTTACTCTTAACATAT+GGG - chr2.2:39239698-39239717 None:intergenic 20.0%
!!! AATGAATAAGGTATATTTTC+TGG + chr2.2:39239517-39239536 MS.gene033909:intron 20.0%
!!! AATTTCCAAATTTCTTTTGT+AGG + chr2.2:39239433-39239452 MS.gene033909:intron 20.0%
!!! ATAATGAAATTGAAGAGTAT+GGG + chr2.2:39240527-39240546 MS.gene033909:intron 20.0%
!!! ATGAATAAGGTATATTTTCT+GGG + chr2.2:39239518-39239537 MS.gene033909:intron 20.0%
!!! CGGATAACATTATAAAATTT+TGG - chr2.2:39241327-39241346 None:intergenic 20.0%
!!! CTTTTAGTATTTTTTTGAGA+GGG + chr2.2:39240202-39240221 MS.gene033909:intron 20.0%
!!! TAATGATTTCTTTTTGCAAA+AGG - chr2.2:39238930-39238949 None:intergenic 20.0%
!!! TACATTGTTGTCTTTATTTT+TGG + chr2.2:39239034-39239053 MS.gene033909:intron 20.0%
! AAAAATTGGATTTCAAGCTA+TGG - chr2.2:39237761-39237780 None:intergenic 25.0%
! AAGAGTAACTTAACTTTCAT+AGG + chr2.2:39239705-39239724 MS.gene033909:intron 25.0%
! ACAACACTTCATCAAATAAA+AGG - chr2.2:39237585-39237604 None:intergenic 25.0%
! ACATACTTTAAACTACCAAA+AGG + chr2.2:39240898-39240917 MS.gene033909:intron 25.0%
! AGACTAATAATTGTTCATTG+TGG - chr2.2:39240271-39240290 None:intergenic 25.0%
! ATAAAGGTCTGATTACTAAA+CGG - chr2.2:39237560-39237579 None:intergenic 25.0%
! ATAACTTCTTTCTTTCTTGT+AGG + chr2.2:39237010-39237029 MS.gene033909:intron 25.0%
! ATACTTTAAACTACCAAAAG+GGG + chr2.2:39240900-39240919 MS.gene033909:intron 25.0%
! ATATTTATGATTTCCATCCA+TGG + chr2.2:39239749-39239768 MS.gene033909:intron 25.0%
! ATCAATTGCTAGAATAGAAA+AGG + chr2.2:39236275-39236294 MS.gene033909:intron 25.0%
! CAAAAAGAAATCATTATGCT+AGG + chr2.2:39238934-39238953 MS.gene033909:intron 25.0%
! CAGAAAATATTGATGAAACT+TGG + chr2.2:39241368-39241387 MS.gene033909:intron 25.0%
! CATACTTTAAACTACCAAAA+GGG + chr2.2:39240899-39240918 MS.gene033909:intron 25.0%
! CATCAAATAAAAGGTGATAA+AGG - chr2.2:39237576-39237595 None:intergenic 25.0%
! GAGAAATAAGAAAGAACAAA+AGG - chr2.2:39236925-39236944 None:intergenic 25.0%
! GATTTAGAGGAGAATTATAT+AGG - chr2.2:39238741-39238760 None:intergenic 25.0%
! GTGCTTACTTAATAGAAATT+TGG + chr2.2:39240394-39240413 MS.gene033909:intron 25.0%
! GTTAAGTTACTCTTAACATA+TGG - chr2.2:39239699-39239718 None:intergenic 25.0%
! TAAATAGATTTCTAACTGGA+CGG - chr2.2:39238969-39238988 None:intergenic 25.0%
! TAATGCCTACAAAAGAAATT+TGG - chr2.2:39239441-39239460 None:intergenic 25.0%
! TCTTAAGGACACAATAAATT+GGG - chr2.2:39238452-39238471 None:intergenic 25.0%
! TTCTTAAGGACACAATAAAT+TGG - chr2.2:39238453-39238472 None:intergenic 25.0%
! TTTCGGATAACATAAATTGT+TGG - chr2.2:39241415-39241434 None:intergenic 25.0%
!! AAAATTCTTCTTTCTTTTCG+AGG + chr2.2:39239386-39239405 MS.gene033909:intron 25.0%
!! AAATTCTTCTTTCTTTTCGA+GGG + chr2.2:39239387-39239406 MS.gene033909:intron 25.0%
!! ACATGTTCTTGATTTTCTTA+AGG - chr2.2:39238467-39238486 None:intergenic 25.0%
!! ATATTCAAAGCATTTCTTCA+TGG - chr2.2:39238765-39238784 None:intergenic 25.0%
!! CTTTCCATTGTTCAAAATTT+TGG + chr2.2:39239550-39239569 MS.gene033909:intron 25.0%
!! GATTTTCATTTATTCATGAC+AGG + chr2.2:39241599-39241618 MS.gene033909:intron 25.0%
!! GGATGTTTATGATTGTTATT+AGG - chr2.2:39238909-39238928 None:intergenic 25.0%
!! GTTTCTTTTTACAACTAGTT+TGG + chr2.2:39238883-39238902 MS.gene033909:intron 25.0%
!! TAATGAAATTGAAGAGTATG+GGG + chr2.2:39240528-39240547 MS.gene033909:intron 25.0%
!! TAGTCCAAAATTTTGAACAA+TGG - chr2.2:39239557-39239576 None:intergenic 25.0%
!! TATAAGCTATGAAGCATTTA+CGG - chr2.2:39236489-39236508 None:intergenic 25.0%
!! TGATTTGAGTTAATGGTTAA+AGG + chr2.2:39236594-39236613 MS.gene033909:intron 25.0%
!!! ACAAATACTTTTGAAGATTG+TGG + chr2.2:39240739-39240758 MS.gene033909:intron 25.0%
!!! ATTCTGTTTTTCTCTTCTTA+TGG + chr2.2:39241870-39241889 MS.gene033909:intron 25.0%
!!! CAAATACTTTTGAAGATTGT+GGG + chr2.2:39240740-39240759 MS.gene033909:intron 25.0%
!!! GCTTTTAGTATTTTTTTGAG+AGG + chr2.2:39240201-39240220 MS.gene033909:intron 25.0%
!!! TGTCTTTATTTTTGGTTGAA+TGG + chr2.2:39239042-39239061 MS.gene033909:intron 25.0%
!!! TTTATTTTTGGTTGAATGGA+GGG + chr2.2:39239046-39239065 MS.gene033909:intron 25.0%
AAAAGAAACATTTACACCAG+TGG - chr2.2:39238872-39238891 None:intergenic 30.0%
AAAGAAATCATTATGCTAGG+CGG + chr2.2:39238937-39238956 MS.gene033909:intron 30.0%
AAAGCAGTTTCAAGATCTTA+TGG - chr2.2:39237483-39237502 None:intergenic 30.0%
AAAGCTAAAATGCTTGTAGT+TGG - chr2.2:39238532-39238551 None:intergenic 30.0%
AAGAAGAGAAAAACAGAATC+AGG - chr2.2:39241869-39241888 None:intergenic 30.0%
AAGAGAGAAAAAAACACAGA+AGG + chr2.2:39240694-39240713 MS.gene033909:intron 30.0%
AATCAAGAACATGTTTGCTT+TGG + chr2.2:39238473-39238492 MS.gene033909:intron 30.0%
AATTACAAGCAAGAAAGAGT+AGG + chr2.2:39238824-39238843 MS.gene033909:intron 30.0%
AATTTAATAGTGCTTCCAGT+TGG - chr2.2:39239164-39239183 None:intergenic 30.0%
ACTATAGTTGAAGGTTGTAT+TGG - chr2.2:39238097-39238116 None:intergenic 30.0%
ACTTTAGATTCAATGCAAAC+AGG - chr2.2:39239941-39239960 None:intergenic 30.0%
AGAAGTTTCGTATTTAGTTG+AGG + chr2.2:39237689-39237708 MS.gene033909:intron 30.0%
ATATAATCTAATGCTATGGC+TGG - chr2.2:39241291-39241310 None:intergenic 30.0%
ATCAAATAGTAGAAGGTGAA+GGG + chr2.2:39236538-39236557 MS.gene033909:intron 30.0%
ATCAAGAACATGTTTGCTTT+GGG + chr2.2:39238474-39238493 MS.gene033909:intron 30.0%
ATGAAAATCAGATATGACAG+AGG - chr2.2:39241588-39241607 None:intergenic 30.0%
ATGTCAGTAACTATAGTTGA+AGG - chr2.2:39238106-39238125 None:intergenic 30.0%
ATTAAAAGAGAGGCAAAAAC+TGG + chr2.2:39237175-39237194 MS.gene033909:CDS 30.0%
ATTACACATGTCAATTAGCT+TGG + chr2.2:39241197-39241216 MS.gene033909:intron 30.0%
ATTGTATGAAGAAAACTCCA+AGG - chr2.2:39236855-39236874 None:intergenic 30.0%
ATTTAATAGTGCTTCCAGTT+GGG - chr2.2:39239163-39239182 None:intergenic 30.0%
ATTTCTTCATGGAGATTTAG+AGG - chr2.2:39238754-39238773 None:intergenic 30.0%
CATCAAACAAAAGGTGATAA+AGG - chr2.2:39237956-39237975 None:intergenic 30.0%
CCAGATAAAGAACTAATTGA+AGG + chr2.2:39240440-39240459 MS.gene033909:intron 30.0%
GAATAAGTGTATGTTTGATC+TGG + chr2.2:39237363-39237382 MS.gene033909:intron 30.0%
GAGTTAATGGTTAAAGGATT+TGG + chr2.2:39236600-39236619 MS.gene033909:intron 30.0%
GCTTCATAGCTTATAATGTT+TGG + chr2.2:39236494-39236513 MS.gene033909:intron 30.0%
GGAAATGTTTGACAAAAAAC+TGG + chr2.2:39239844-39239863 MS.gene033909:intron 30.0%
GTCATTTATGTATATGTACC+TGG - chr2.2:39241520-39241539 None:intergenic 30.0%
TAAAGGTCTGATTACTAAAC+GGG - chr2.2:39237939-39237958 None:intergenic 30.0%
TAGCACATTAAGTCAAGAAT+GGG - chr2.2:39238321-39238340 None:intergenic 30.0%
TATGAGTTAGCAAAGCTTTA+TGG + chr2.2:39236733-39236752 MS.gene033909:intron 30.0%
TGAAGAACTTGAAAAGAGAT+TGG + chr2.2:39242070-39242089 MS.gene033909:CDS 30.0%
TGAAGGAACAACAATAAACT+AGG + chr2.2:39240457-39240476 MS.gene033909:intron 30.0%
TTAATGGTTAAAGGATTTGG+AGG + chr2.2:39236603-39236622 MS.gene033909:intron 30.0%
TTACTAAATGTGTGTTCCTT+TGG - chr2.2:39237548-39237567 None:intergenic 30.0%
TTAGCACATTAAGTCAAGAA+TGG - chr2.2:39238322-39238341 None:intergenic 30.0%
TTGTATGAAGAAAACTCCAA+GGG - chr2.2:39236854-39236873 None:intergenic 30.0%
TTGTATTGAAGTGTAAACCA+TGG - chr2.2:39239769-39239788 None:intergenic 30.0%
TTTGTGTCAAAGTCAATTGT+TGG + chr2.2:39238561-39238580 MS.gene033909:intron 30.0%
! AACAATTGACTTTGACACAA+AGG - chr2.2:39238562-39238581 None:intergenic 30.0%
! CCTTCAATTAGTTCTTTATC+TGG - chr2.2:39240443-39240462 None:intergenic 30.0%
! TAATGTGTTAGATGCTTTTC+TGG + chr2.2:39239964-39239983 MS.gene033909:intron 30.0%
! TAGCTTATAATGTTTGGAGT+TGG + chr2.2:39236500-39236519 MS.gene033909:intron 30.0%
! TTAGTTCTTACACTTACGTT+TGG - chr2.2:39240834-39240853 None:intergenic 30.0%
! TTCAAGTTCTTCAACATCTT+GGG - chr2.2:39242063-39242082 None:intergenic 30.0%
! TTGCTAAATAATGAAGTGTC+TGG + chr2.2:39239242-39239261 MS.gene033909:intron 30.0%
!! TTTCAAGTTCTTCAACATCT+TGG - chr2.2:39242064-39242083 None:intergenic 30.0%
!!! CTTTATTTTTGGTTGAATGG+AGG + chr2.2:39239045-39239064 MS.gene033909:intron 30.0%
!!! TTAGTATTTTTTTGAGAGGG+AGG + chr2.2:39240205-39240224 MS.gene033909:intron 30.0%
ACATTACAACTGCAACAGTT+GGG - chr2.2:39239116-39239135 None:intergenic 35.0%
ACGACACTTCATCAAACAAA+AGG - chr2.2:39237965-39237984 None:intergenic 35.0%
ACTATACTGAAGACGATAGT+GGG + chr2.2:39240627-39240646 MS.gene033909:intron 35.0%
AGAAGCTCCATATTTAGTTG+AGG + chr2.2:39238067-39238086 MS.gene033909:intron 35.0%
AGAATCAGTTTATGACCCAA+AGG + chr2.2:39239612-39239631 MS.gene033909:intron 35.0%
AGTTGCAGAGATTAAAAGAG+AGG + chr2.2:39237165-39237184 MS.gene033909:CDS 35.0%
AGTTGCGATCAAATAGTAGA+AGG + chr2.2:39236531-39236550 MS.gene033909:intron 35.0%
ATTAAGTCAAGAATGGGTAG+AGG - chr2.2:39238315-39238334 None:intergenic 35.0%
ATTGAAGTGTAAACCATGGA+TGG - chr2.2:39239765-39239784 None:intergenic 35.0%
CAACAGATAACTAATCTGCA+GGG + chr2.2:39239313-39239332 MS.gene033909:CDS 35.0%
CATCATCTCAATCTGCATTT+CGG - chr2.2:39241432-39241451 None:intergenic 35.0%
CCAAATTATTACCGTGTTGA+CGG + chr2.2:39236455-39236474 MS.gene033909:intron 35.0%
CGAATAGTTAGTTCATAGCA+TGG + chr2.2:39241740-39241759 MS.gene033909:intron 35.0%
CGATGAGTTTGACAAAATCA+CGG - chr2.2:39237421-39237440 None:intergenic 35.0%
CTTGAATGTAACCAATGTGT+CGG - chr2.2:39236423-39236442 None:intergenic 35.0%
GAATCAGTTTATGACCCAAA+GGG + chr2.2:39239613-39239632 MS.gene033909:intron 35.0%
GACATTGATAGAAGTTAGCA+AGG + chr2.2:39236959-39236978 MS.gene033909:intron 35.0%
GATCAAATAGTAGAAGGTGA+AGG + chr2.2:39236537-39236556 MS.gene033909:intron 35.0%
TACATTACAACTGCAACAGT+TGG - chr2.2:39239117-39239136 None:intergenic 35.0%
TAGTTGAAGGTTGTATTGGA+TGG - chr2.2:39238093-39238112 None:intergenic 35.0%
TATTAAGTAAGCACCACCTT+TGG - chr2.2:39240388-39240407 None:intergenic 35.0%
TCAGAATATTGCTATGACGT+GGG + chr2.2:39240866-39240885 MS.gene033909:intron 35.0%
TCATGCATTCCAAATCAGTT+CGG - chr2.2:39239206-39239225 None:intergenic 35.0%
TCCTTTATTGCTTGTACTCT+TGG + chr2.2:39238348-39238367 MS.gene033909:intron 35.0%
TGACAGGTTCTTGATGAAAT+TGG + chr2.2:39241615-39241634 MS.gene033909:intron 35.0%
TGTAAAAACTTTGTTGCCTC+TGG - chr2.2:39237822-39237841 None:intergenic 35.0%
TTAAGTCAAGAATGGGTAGA+GGG - chr2.2:39238314-39238333 None:intergenic 35.0%
TTCATCTTAACTGGGATCAA+AGG + chr2.2:39237269-39237288 MS.gene033909:intron 35.0%
TTCTAGCAAAAGCAAGGTAA+TGG + chr2.2:39240992-39241011 MS.gene033909:intron 35.0%
TTGCTTATCTTCTCAGCAAA+TGG + chr2.2:39240049-39240068 MS.gene033909:intron 35.0%
TTGTGAAACTGTCATCAAGA+TGG + chr2.2:39240562-39240581 MS.gene033909:intron 35.0%
TTTAGACAAAGATGAAGCTG+AGG + chr2.2:39241472-39241491 MS.gene033909:CDS 35.0%
TTTGTTTGCTTCTTTGGCAA+AGG - chr2.2:39239666-39239685 None:intergenic 35.0%
! AAATCACGTGTTTTCACACA+AGG + chr2.2:39241707-39241726 MS.gene033909:intron 35.0%
! ACACAATAAATTGGGTTGCA+AGG - chr2.2:39238444-39238463 None:intergenic 35.0%
! AGATTATGAGCATTGCCAAT+AGG + chr2.2:39237639-39237658 MS.gene033909:intron 35.0%
! ATAATGAAGTGTCTGGTTAC+AGG + chr2.2:39239249-39239268 MS.gene033909:intron 35.0%
! ATTTGCTGAGAAGATAAGCA+AGG - chr2.2:39240050-39240069 None:intergenic 35.0%
! CAAGTACGTATAAGAGTATG+AGG + chr2.2:39238218-39238237 MS.gene033909:intron 35.0%
! GCTCATCTGATTTGAGTTAA+TGG + chr2.2:39236587-39236606 MS.gene033909:intron 35.0%
! TGGGTGTTTTCATCTTAACT+GGG + chr2.2:39237261-39237280 MS.gene033909:intron 35.0%
! TTGGGTGTTTTCATCTTAAC+TGG + chr2.2:39237260-39237279 MS.gene033909:intron 35.0%
!! ACATCAATTGGTAGCTTTGT+TGG - chr2.2:39237525-39237544 None:intergenic 35.0%
!! TAGAGGGAATTTTCTAGAAG+TGG - chr2.2:39238298-39238317 None:intergenic 35.0%
!! TGTTGCTTTGTTTGCTTCTT+TGG - chr2.2:39239672-39239691 None:intergenic 35.0%
AAACACAGAAGGAGAACTTG+AGG + chr2.2:39240705-39240724 MS.gene033909:intron 40.0%
AAACATTTACACCAGTGGCA+AGG - chr2.2:39238867-39238886 None:intergenic 40.0%
AAATAGTAGAAGGTGAAGGG+TGG + chr2.2:39236541-39236560 MS.gene033909:intron 40.0%
AATAGTAGAAGGTGAAGGGT+GGG + chr2.2:39236542-39236561 MS.gene033909:intron 40.0%
ACAGGCTTCTACTAAAATCC+TGG + chr2.2:39239267-39239286 MS.gene033909:intron 40.0%
ACTCAACCAGCTTCAATTTG+TGG + chr2.2:39241055-39241074 MS.gene033909:intron 40.0%
AGAGATAGCATCACTTCAGA+TGG + chr2.2:39237042-39237061 MS.gene033909:CDS 40.0%
AGAGGCAAAAACTGGAAATG+AGG + chr2.2:39237183-39237202 MS.gene033909:CDS 40.0%
AGCAATGGTGGCAATGAATA+AGG + chr2.2:39239505-39239524 MS.gene033909:CDS 40.0%
AGCATTGTATGATCCACCAA+AGG + chr2.2:39240369-39240388 MS.gene033909:intron 40.0%
AGCTACCAATTGATGTCCAA+AGG + chr2.2:39237529-39237548 MS.gene033909:intron 40.0%
AGGGATTCTGCTTGAATAAG+AGG - chr2.2:39238721-39238740 None:intergenic 40.0%
AGTTCCCAACAGTCTAATAC+TGG - chr2.2:39240324-39240343 None:intergenic 40.0%
AGTTTGACAAAATCACGGTG+TGG - chr2.2:39237416-39237435 None:intergenic 40.0%
ATCAGAAGAACTCACTAACC+AGG + chr2.2:39241499-39241518 MS.gene033909:CDS 40.0%
ATGCAGTATCAGTCATCGAT+TGG - chr2.2:39237875-39237894 None:intergenic 40.0%
ATGCAGTATTAGTCACCGAT+TGG - chr2.2:39238251-39238270 None:intergenic 40.0%
ATTGGGCTCAAAACAAACCT+GGG - chr2.2:39241655-39241674 None:intergenic 40.0%
ATTGTATGATCCACCAAAGG+TGG + chr2.2:39240372-39240391 MS.gene033909:intron 40.0%
CAAGCACTTCAATCTCTACA+GGG + chr2.2:39239465-39239484 MS.gene033909:CDS 40.0%
CAAGGCAGTTAAGCACTAAA+AGG - chr2.2:39237124-39237143 None:intergenic 40.0%
CACTATACTGAAGACGATAG+TGG + chr2.2:39240626-39240645 MS.gene033909:intron 40.0%
CACTATCGTCTTCAGTATAG+TGG - chr2.2:39240628-39240647 None:intergenic 40.0%
CATCATCTCAAACTGCATCT+CGG - chr2.2:39241347-39241366 None:intergenic 40.0%
CCAACAGATAACTAATCTGC+AGG + chr2.2:39239312-39239331 MS.gene033909:CDS 40.0%
CCAACTACTCGAAAACTCTT+AGG - chr2.2:39241788-39241807 None:intergenic 40.0%
CCGTCAACACGGTAATAATT+TGG - chr2.2:39236458-39236477 None:intergenic 40.0%
CTCATGGTAGTACTTAAAGC+AGG + chr2.2:39241263-39241282 MS.gene033909:intron 40.0%
CTTCTACTAAAATCCTGGCT+CGG + chr2.2:39239272-39239291 MS.gene033909:CDS 40.0%
GAAACTTGTCACAGCAATTG+GGG + chr2.2:39240922-39240941 MS.gene033909:intron 40.0%
GAATAAGAGGTCCTTAGTTG+AGG - chr2.2:39238708-39238727 None:intergenic 40.0%
GAATTTCAAGCTATGGCTCA+AGG - chr2.2:39238132-39238151 None:intergenic 40.0%
GGAAACTTGTCACAGCAATT+GGG + chr2.2:39240921-39240940 MS.gene033909:intron 40.0%
GGAAATGTTTGACAGAAGAC+TGG + chr2.2:39239726-39239745 MS.gene033909:intron 40.0%
GGTTCTTGATGAAATTGGAG+TGG + chr2.2:39241620-39241639 MS.gene033909:intron 40.0%
GTCAGAATATTGCTATGACG+TGG + chr2.2:39240865-39240884 MS.gene033909:intron 40.0%
GTCTGATTACTAAACGGGTA+GGG - chr2.2:39237934-39237953 None:intergenic 40.0%
GTGTTCCTTTGGACATCAAT+TGG - chr2.2:39237537-39237556 None:intergenic 40.0%
GTTCAGTTTCTTACTACTCC+AGG + chr2.2:39238179-39238198 MS.gene033909:intron 40.0%
GTTTGACAAAATCACGGTGT+GGG - chr2.2:39237415-39237434 None:intergenic 40.0%
TACTCTGTTGTACTCAACCA+CGG + chr2.2:39241044-39241063 MS.gene033909:intron 40.0%
TAGTTATCTTCTGCTCCGAA+AGG + chr2.2:39241893-39241912 MS.gene033909:intron 40.0%
TATGTTGAGACGTCTGTTGA+AGG - chr2.2:39238592-39238611 None:intergenic 40.0%
TATTGGGCTCAAAACAAACC+TGG - chr2.2:39241656-39241675 None:intergenic 40.0%
TCAATCTCTACAGGGATGAA+GGG + chr2.2:39239473-39239492 MS.gene033909:CDS 40.0%
TCATTGTGGTGTGCAATCTT+TGG - chr2.2:39240257-39240276 None:intergenic 40.0%
TCTGATTACTAAACGGGTAG+GGG - chr2.2:39237933-39237952 None:intergenic 40.0%
TGAAGAAAACTCCAAGGGTT+TGG - chr2.2:39236849-39236868 None:intergenic 40.0%
TGGATGGCCTCAACTAAATA+TGG - chr2.2:39238077-39238096 None:intergenic 40.0%
TGTGTGTATCCGAACTGATT+TGG + chr2.2:39239194-39239213 MS.gene033909:intron 40.0%
TGTTTGATCTGGCAGTTGAA+TGG + chr2.2:39237374-39237393 MS.gene033909:intron 40.0%
TTAAAGGATTTGGAGGTCCT+TGG + chr2.2:39236610-39236629 MS.gene033909:intron 40.0%
TTACATTTACCTCCCTCCAA+GGG + chr2.2:39236771-39236790 MS.gene033909:intron 40.0%
TTCAATCTCTACAGGGATGA+AGG + chr2.2:39239472-39239491 MS.gene033909:CDS 40.0%
TTCGCCAGTATTAGACTGTT+GGG + chr2.2:39240317-39240336 MS.gene033909:intron 40.0%
TTTACATTTACCTCCCTCCA+AGG + chr2.2:39236770-39236789 MS.gene033909:intron 40.0%
TTTCGCCAGTATTAGACTGT+TGG + chr2.2:39240316-39240335 MS.gene033909:intron 40.0%
! AGATTATGAGCATTGCCAGT+AGG + chr2.2:39238018-39238037 MS.gene033909:intron 40.0%
! AGCTTTATGGCACTCACAAA+TGG + chr2.2:39236746-39236765 MS.gene033909:intron 40.0%
! CAAGTGCGTATAAGAGTATG+AGG + chr2.2:39237842-39237861 MS.gene033909:intron 40.0%
! CCTGCAGATTAGTTATCTGT+TGG - chr2.2:39239315-39239334 None:intergenic 40.0%
! CTGCTTTAAGTACTACCATG+AGG - chr2.2:39241265-39241284 None:intergenic 40.0%
! GCAACTAACTTCTTTTCCTG+CGG - chr2.2:39237151-39237170 None:intergenic 40.0%
! GCCAAGAGTACAAGCAATAA+AGG - chr2.2:39238352-39238371 None:intergenic 40.0%
! TTATGAGCATTGCCAATAGG+CGG + chr2.2:39237642-39237661 MS.gene033909:intron 40.0%
!! AGGGAATTTTCTAGAAGTGG+TGG - chr2.2:39238295-39238314 None:intergenic 40.0%
!! GGGAATTTTCTAGAAGTGGT+GGG - chr2.2:39238294-39238313 None:intergenic 40.0%
!! GTTTGCTTTGGGAAATGAAG+AGG + chr2.2:39238485-39238504 MS.gene033909:intron 40.0%
!! TTGGTAGCTTTGTTGGTTAC+AGG - chr2.2:39237518-39237537 None:intergenic 40.0%
!!! ATTGCCAATAGGCGGTTTTT+TGG + chr2.2:39237650-39237669 MS.gene033909:intron 40.0%
!!! CCTAAGAGTTTTCGAGTAGT+TGG + chr2.2:39241785-39241804 MS.gene033909:intron 40.0%
AACCATCTCTCGTGCTTGAT+TGG - chr2.2:39238648-39238667 None:intergenic 45.0%
AATCATTATGCTAGGCGGAG+AGG + chr2.2:39238942-39238961 MS.gene033909:intron 45.0%
ACAGAAGGAGAACTTGAGGT+TGG + chr2.2:39240709-39240728 MS.gene033909:intron 45.0%
ACCAGCTTCTAGCAAAAGCA+AGG + chr2.2:39240986-39241005 MS.gene033909:intron 45.0%
AGAGGTCCTTAGTTGAGGAA+TGG - chr2.2:39238703-39238722 None:intergenic 45.0%
AGTACTACCATGAGGCTATC+AGG - chr2.2:39241257-39241276 None:intergenic 45.0%
AGTCGTACAGTCTTCGTTTG+TGG + chr2.2:39238616-39238635 MS.gene033909:intron 45.0%
ATACTGGCGAAACACTGGAT+TGG - chr2.2:39240308-39240327 None:intergenic 45.0%
ATAGTAGAAGGTGAAGGGTG+GGG + chr2.2:39236543-39236562 MS.gene033909:intron 45.0%
ATCACTTTAGCCTGCTTTGC+CGG - chr2.2:39240077-39240096 None:intergenic 45.0%
ATCAGCACAACTGGACATGA+CGG + chr2.2:39240115-39240134 MS.gene033909:CDS 45.0%
ATCATTATGCTAGGCGGAGA+GGG + chr2.2:39238943-39238962 MS.gene033909:intron 45.0%
ATCCACTCTCTCTCTAGTTG+AGG + chr2.2:39237341-39237360 MS.gene033909:intron 45.0%
ATCGTCTTCAGTATAGTGGC+AGG - chr2.2:39240624-39240643 None:intergenic 45.0%
ATCTTCTCAGCAAATGGCAC+CGG + chr2.2:39240055-39240074 MS.gene033909:intron 45.0%
ATGCTGAAAATGCTGCTCCA+AGG + chr2.2:39241933-39241952 MS.gene033909:CDS 45.0%
CAAGACAACCTCTACCCTTT+GGG - chr2.2:39239630-39239649 None:intergenic 45.0%
CATCGACACTTCACACATTG+AGG + chr2.2:39236392-39236411 MS.gene033909:intron 45.0%
CATTGCCACCATTGCTTTAG+TGG - chr2.2:39239501-39239520 None:intergenic 45.0%
CCAAAAGCAATCAGCACAAC+TGG + chr2.2:39240106-39240125 MS.gene033909:CDS 45.0%
CGGACATTTAACCGTCAACA+CGG - chr2.2:39236469-39236488 None:intergenic 45.0%
CTGATTACTAAACGGGTAGG+GGG - chr2.2:39237932-39237951 None:intergenic 45.0%
CTGGTTCCACAAATTGAAGC+TGG - chr2.2:39241064-39241083 None:intergenic 45.0%
CTTGAAGCAATCCGACCTTT+CGG - chr2.2:39241911-39241930 None:intergenic 45.0%
GAAGATTGTGGGCAATAGAG+AGG + chr2.2:39240751-39240770 MS.gene033909:intron 45.0%
GAGGTCACAGGTTCAATTTG+TGG + chr2.2:39240962-39240981 MS.gene033909:intron 45.0%
GATAGCATCACTTCAGATGG+AGG + chr2.2:39237045-39237064 MS.gene033909:CDS 45.0%
GCAAGCACTTCAATCTCTAC+AGG + chr2.2:39239464-39239483 MS.gene033909:CDS 45.0%
GGAGTTGCTTATTCGCAACA+AGG - chr2.2:39238511-39238530 None:intergenic 45.0%
GGATTTCAAGCTATGGCTTG+AGG - chr2.2:39237754-39237773 None:intergenic 45.0%
GGGAAACTTGTCACAGCAAT+TGG + chr2.2:39240920-39240939 MS.gene033909:intron 45.0%
GGTCTGATTACTAAACGGGT+AGG - chr2.2:39237935-39237954 None:intergenic 45.0%
GGTTGAGTACAACAGAGTAC+TGG - chr2.2:39241043-39241062 None:intergenic 45.0%
GTATGAGGTTGACCTCCAAT+CGG + chr2.2:39237857-39237876 MS.gene033909:intron 45.0%
GTCTAATACTGGCGAAACAC+TGG - chr2.2:39240313-39240332 None:intergenic 45.0%
GTTTATGACCCAAAGGGTAG+AGG + chr2.2:39239619-39239638 MS.gene033909:intron 45.0%
TAAGTAAGCACCACCTTTGG+TGG - chr2.2:39240385-39240404 None:intergenic 45.0%
TACTGTAGTATCTGCCCAAC+TGG + chr2.2:39239146-39239165 MS.gene033909:intron 45.0%
TATCTTCTGCTCCGAAAGGT+CGG + chr2.2:39241897-39241916 MS.gene033909:CDS 45.0%
TCAAGACAACCTCTACCCTT+TGG - chr2.2:39239631-39239650 None:intergenic 45.0%
TCAGTTTCTGACTACTCCAG+AGG + chr2.2:39237803-39237822 MS.gene033909:intron 45.0%
TCTGCATGCACAAAGCAACA+TGG - chr2.2:39242033-39242052 None:intergenic 45.0%
TGATTACTAAACGGGTAGGG+GGG - chr2.2:39237931-39237950 None:intergenic 45.0%
TGCACACCATTCCTCAACTA+AGG + chr2.2:39238694-39238713 MS.gene033909:intron 45.0%
TGTCTAGAGACTTTGTTGCC+TGG - chr2.2:39238200-39238219 None:intergenic 45.0%
TTCCTCAACTAGAGAGAGAG+TGG - chr2.2:39237346-39237365 None:intergenic 45.0%
TTTGTCCCGCATTTGTACCA+AGG - chr2.2:39236630-39236649 None:intergenic 45.0%
! CAGTATCAGTCATCGATTGG+AGG - chr2.2:39237872-39237891 None:intergenic 45.0%
! CAGTATTAGTCACCGATTGG+AGG - chr2.2:39238248-39238267 None:intergenic 45.0%
! CATTGCCAGTAGGTGGTTTT+TGG + chr2.2:39238028-39238047 MS.gene033909:intron 45.0%
! CTGTGACAAGTTTCCCCTTT+TGG - chr2.2:39240916-39240935 None:intergenic 45.0%
! TAGTGGACAGGTCTTGGATA+TGG - chr2.2:39236824-39236843 None:intergenic 45.0%
! TTATGAGCATTGCCAGTAGG+TGG + chr2.2:39238021-39238040 MS.gene033909:intron 45.0%
! TTCTTTTCCTGCGGTACACA+AGG - chr2.2:39237142-39237161 None:intergenic 45.0%
!! ACCTTGCTTTTGCTAGAAGC+TGG - chr2.2:39240990-39241009 None:intergenic 45.0%
!! GGGGATTTTCTAGAAGTGGT+GGG - chr2.2:39237912-39237931 None:intergenic 45.0%
!! TAGGGGGGATTTTCTAGAAG+TGG - chr2.2:39237916-39237935 None:intergenic 45.0%
!!! CCAGTTGTGCTGATTGCTTT+TGG - chr2.2:39240109-39240128 None:intergenic 45.0%
!!! ATATTATATTCATTATTTTA+AGG - chr2.2:39236351-39236370 None:intergenic 5.0%
ACCAGTGGCAAGGATGAACA+CGG - chr2.2:39238857-39238876 None:intergenic 50.0%
CACCAATCAAGCACGAGAGA+TGG + chr2.2:39238643-39238662 MS.gene033909:intron 50.0%
CACGCCAAAAAACCGCCTAT+TGG - chr2.2:39237657-39237676 None:intergenic 50.0%
CGAAAGGTCGGATTGCTTCA+AGG + chr2.2:39241909-39241928 MS.gene033909:CDS 50.0%
GAGGTCCTTGGTACAAATGC+GGG + chr2.2:39236622-39236641 MS.gene033909:intron 50.0%
GCACACCAAAAACCACCTAC+TGG - chr2.2:39238036-39238055 None:intergenic 50.0%
GCATGCACAAAGCAACATGG+AGG - chr2.2:39242030-39242049 None:intergenic 50.0%
GGAGGTCCTTGGTACAAATG+CGG + chr2.2:39236621-39236640 MS.gene033909:intron 50.0%
GTCTTGGATATGGAGGTTCC+AGG - chr2.2:39236814-39236833 None:intergenic 50.0%
TAGTAGAAGGTGAAGGGTGG+GGG + chr2.2:39236544-39236563 MS.gene033909:intron 50.0%
TGGACAGGTCTTGGATATGG+AGG - chr2.2:39236821-39236840 None:intergenic 50.0%
TGGAGTGGATATTGCATCCC+AGG + chr2.2:39241635-39241654 MS.gene033909:CDS 50.0%
TGTCCACTAGACCAAACCCT+TGG + chr2.2:39236835-39236854 MS.gene033909:intron 50.0%
TTAACTGCCTTGTGTACCGC+AGG + chr2.2:39237132-39237151 MS.gene033909:intron 50.0%
TTGAGGTGTGTCCGACACAT+TGG + chr2.2:39236409-39236428 MS.gene033909:intron 50.0%
! AAGGGTTTGGTCTAGTGGAC+AGG - chr2.2:39236836-39236855 None:intergenic 50.0%
! ACTCCAAGGGTTTGGTCTAG+TGG - chr2.2:39236841-39236860 None:intergenic 50.0%
! AGTGGGTGTGGTTTTTGCAC+TGG + chr2.2:39240644-39240663 MS.gene033909:intron 50.0%
! TTGGTCTAGTGGACAGGTCT+TGG - chr2.2:39236830-39236849 None:intergenic 50.0%
!! ACTGAAGACGATAGTGGGTG+TGG + chr2.2:39240632-39240651 MS.gene033909:intron 50.0%
!! GAAGGGTGCCACTAAAGCAA+TGG + chr2.2:39239490-39239509 MS.gene033909:CDS 50.0%
!! GGGGGATTTTCTAGAAGTGG+TGG - chr2.2:39237913-39237932 None:intergenic 50.0%
ACCGTGTTCATCCTTGCCAC+TGG + chr2.2:39238853-39238872 MS.gene033909:intron 55.0%
AGGGAAGTCGTGCACAGATC+AGG + chr2.2:39239332-39239351 MS.gene033909:CDS 55.0%
CCATGTGACTAGGAGGTCAC+AGG + chr2.2:39240950-39240969 MS.gene033909:intron 55.0%
CCTGTGACCTCCTAGTCACA+TGG - chr2.2:39240953-39240972 None:intergenic 55.0%
CTACCATGAGGCTATCAGGC+AGG - chr2.2:39241253-39241272 None:intergenic 55.0%
GGAAGTCGTGCACAGATCAG+GGG + chr2.2:39239334-39239353 MS.gene033909:CDS 55.0%
GGGAAGTCGTGCACAGATCA+GGG + chr2.2:39239333-39239352 MS.gene033909:CDS 55.0%
GGGTGTAGCAACTCACACAC+AGG + chr2.2:39239354-39239373 MS.gene033909:CDS 55.0%
GGTTGCACCATGTGACTAGG+AGG + chr2.2:39240943-39240962 MS.gene033909:intron 55.0%
TGGGGTTGCACCATGTGACT+AGG + chr2.2:39240940-39240959 MS.gene033909:intron 55.0%
TGTTGTACTCAACCACGGCG+AGG + chr2.2:39241142-39241161 MS.gene033909:intron 55.0%
!! GGGTGCCACTAAAGCAATGG+TGG + chr2.2:39239493-39239512 MS.gene033909:CDS 55.0%
ACCTAACTAGCTGCCGAGCC+AGG - chr2.2:39239288-39239307 None:intergenic 60.0%
AGAAGGTGAAGGGTGGGGGT+TGG + chr2.2:39236548-39236567 MS.gene033909:intron 60.0%
ATAAAGCTCTCGCCTCGCCG+TGG - chr2.2:39241157-39241176 None:intergenic 60.0%
GAAGGTGAAGGGTGGGGGTT+GGG + chr2.2:39236549-39236568 MS.gene033909:intron 60.0%
GTGCCTGCCTGATAGCCTCA+TGG + chr2.2:39241247-39241266 MS.gene033909:intron 60.0%
TGAAGGGTGGGGGTTGGGTT+GGG + chr2.2:39236554-39236573 MS.gene033909:intron 60.0%
!! GCAAATGGCACCGGCAAAGC+AGG + chr2.2:39240064-39240083 MS.gene033909:intron 60.0%
!! TCCTGGCTCGGCAGCTAGTT+AGG + chr2.2:39239284-39239303 MS.gene033909:CDS 60.0%
GTGAAGGGTGGGGGTTGGGT+TGG + chr2.2:39236553-39236572 MS.gene033909:intron 65.0%
!! CCTCCCTCCAAGGGCACTAG+CGG + chr2.2:39236780-39236799 MS.gene033909:intron 65.0%
!! CTCCCTCCAAGGGCACTAGC+GGG + chr2.2:39236781-39236800 MS.gene033909:intron 65.0%
!! TCCCTCCAAGGGCACTAGCG+GGG + chr2.2:39236782-39236801 MS.gene033909:intron 65.0%
AGCCCCGCTAGTGCCCTTGG+AGG - chr2.2:39236787-39236806 None:intergenic 70.0%
CCGCTAGTGCCCTTGGAGGG+AGG - chr2.2:39236783-39236802 None:intergenic 70.0%
GCACTAGCGGGGCTCGAACC+TGG + chr2.2:39236793-39236812 MS.gene033909:intron 70.0%
GCCCCGCTAGTGCCCTTGGA+GGG - chr2.2:39236786-39236805 None:intergenic 70.0%
TCGAGCCCCGCTAGTGCCCT+TGG - chr2.2:39236790-39236809 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 39236130 39242112 39236130 ID=MS.gene033909
chr2.2 mRNA 39236130 39242112 39236130 ID=MS.gene033909.t1;Parent=MS.gene033909
chr2.2 exon 39236130 39236148 39236130 ID=MS.gene033909.t1.exon1;Parent=MS.gene033909.t1
chr2.2 CDS 39236130 39236148 39236130 ID=cds.MS.gene033909.t1;Parent=MS.gene033909.t1
chr2.2 exon 39237032 39237066 39237032 ID=MS.gene033909.t1.exon2;Parent=MS.gene033909.t1
chr2.2 CDS 39237032 39237066 39237032 ID=cds.MS.gene033909.t1;Parent=MS.gene033909.t1
chr2.2 exon 39237154 39237204 39237154 ID=MS.gene033909.t1.exon3;Parent=MS.gene033909.t1
chr2.2 CDS 39237154 39237204 39237154 ID=cds.MS.gene033909.t1;Parent=MS.gene033909.t1
chr2.2 exon 39239271 39239375 39239271 ID=MS.gene033909.t1.exon4;Parent=MS.gene033909.t1
chr2.2 CDS 39239271 39239375 39239271 ID=cds.MS.gene033909.t1;Parent=MS.gene033909.t1
chr2.2 exon 39239455 39239526 39239455 ID=MS.gene033909.t1.exon5;Parent=MS.gene033909.t1
chr2.2 CDS 39239455 39239526 39239455 ID=cds.MS.gene033909.t1;Parent=MS.gene033909.t1
chr2.2 exon 39240065 39240136 39240065 ID=MS.gene033909.t1.exon6;Parent=MS.gene033909.t1
chr2.2 CDS 39240065 39240136 39240065 ID=cds.MS.gene033909.t1;Parent=MS.gene033909.t1
chr2.2 exon 39241440 39241520 39241440 ID=MS.gene033909.t1.exon7;Parent=MS.gene033909.t1
chr2.2 CDS 39241440 39241520 39241440 ID=cds.MS.gene033909.t1;Parent=MS.gene033909.t1
chr2.2 exon 39241621 39241656 39241621 ID=MS.gene033909.t1.exon8;Parent=MS.gene033909.t1
chr2.2 CDS 39241621 39241656 39241621 ID=cds.MS.gene033909.t1;Parent=MS.gene033909.t1
chr2.2 exon 39241896 39241954 39241896 ID=MS.gene033909.t1.exon9;Parent=MS.gene033909.t1
chr2.2 CDS 39241896 39241954 39241896 ID=cds.MS.gene033909.t1;Parent=MS.gene033909.t1
chr2.2 exon 39242052 39242112 39242052 ID=MS.gene033909.t1.exon10;Parent=MS.gene033909.t1
chr2.2 CDS 39242052 39242112 39242052 ID=cds.MS.gene033909.t1;Parent=MS.gene033909.t1
Gene Sequence

>MS.gene033909

ATGTCTGTTGCAACTAGAGGTAATTTCATTATTATTCTTATTTTACAAGTCTAGTTTTATTTTACTCATTATTTACTTGTATAATTTCTGAATTTATTTTGTATATCACAAATTTAATTGTTTCCATTTGATTTTATATATGAATATCAATTGCTAGAATAGAAAAGGCTTTCGTATTTTTTTTTCCTTTCTAAATAGGAAAAAATTACCTTATAATACCTTAAAATAATGAATATAATATAACTTATTATAATCTATGTAGCATCGACACTTCACACATTGAGGTGTGTCCGACACATTGGTTACATTCAAGTATTTCATTTTTCCAAATTATTACCGTGTTGACGGTTAAATGTCCGTAAATGCTTCATAGCTTATAATGTTTGGAGTTGGACAAGTATAGTTGCGATCAAATAGTAGAAGGTGAAGGGTGGGGGTTGGGTTGGGTACTTGAGTAGCTCATCTGATTTGAGTTAATGGTTAAAGGATTTGGAGGTCCTTGGTACAAATGCGGGACAAATGAGTAAATATTAATCTAACAACTAATTAGTAACATTTTCCATTAAAAAAAAACAGTTAAAGGTGAAATGTACTCAGAATTTGTATGAGTTAGCAAAGCTTTATGGCACTCACAAATGGATTTACATTTACCTCCCTCCAAGGGCACTAGCGGGGCTCGAACCTGGAACCTCCATATCCAAGACCTGTCCACTAGACCAAACCCTTGGAGTTTTCTTCATACAATATTTTGATTTTAATAAAGTCGCACTTCTGCATTATTCTTCTTTGTTTCCTTTTGTTCTTTCTTATTTCTCGATGTACATTGCAAGACATTGATAGAAGTTAGCAAGGATTCACGTTCAATTAAATTATCATTTGTATAACTTCTTTCTTTCTTGTAGGAATTGAAAGAGAGATAGCATCACTTCAGATGGAGGTAAATAGTGCTAACAGAGATTTTCTTAGTGATTTTACTTTCTGTTTTATATTTCCTTTTAGTGCTTAACTGCCTTGTGTACCGCAGGAAAAGAAGTTAGTTGCAGAGATTAAAAGAGAGGCAAAAACTGGAAATGAGGTAAGTACATTATTAACATCGCGATATTGATAACAGTTTTTATTTAGATGTATATTTGGGTGTTTTCATCTTAACTGGGATCAAAGGTGCAACAAAGTCATTTAAATAAGAGTACAGAGTATTAATAACTCTTAACATCCACTCTCTCTCTAGTTGAGGAATAAGTGTATGTTTGATCTGGCAGTTGAATGGTCATAATCACAGCAACCCACACCGTGATTTTGTCAAACTCATCGCCAATCCAAACATACAAATATTTATCATTCTCAATTTGTCCATAAGATCTTGAAACTGCTTTGTAGAAGAAAGTCCTGTAACCAACAAAGCTACCAATTGATGTCCAAAGGAACACACATTTAGTAATCAGACCTTTATCACCTTTTATTTGATGAAGTGTTGTTCTATTCTTGCATTGACTTATTATGCTAAGTATTAGATTATGAGCATTGCCAATAGGCGGTTTTTTGGCGTGCAACAACTTCTTAGAAGTTTCGTATTTAGTTGAGGTCATCCAATACAATCTTTAACTATAGTTACTGACATATTCCTCAAGCCATAGCTTGAAATCCAATTTTTGTATTTAAACGATCAACTAAGTTCAGTTTCTGACTACTCCAGAGGCAACAAAGTTTTTACACAAGTGCGTATAAGAGTATGAGGTTGACCTCCAATCGATGACTGATACTGCATAGTGTGTTTAGATTCCCACCACTTCTAGAAAATCCCCCCTACCCGTTTAGTAATCAGACCTTTATCACCTTTTGTTTGATGAAGTGTCGTTCTATCATTGCACTGTCTTATTATGCTAACATTAGATTATGAGCATTGCCAGTAGGTGGTTTTTGGTGTGCAACAACTTCTTAGAAGCTCCATATTTAGTTGAGGCCATCCAATACAACCTTCAACTATAGTTACTGACATATTCCTTGAGCCATAGCTTGAAATTCAATTTTTGCATTTAAACGATCAACTATGTTCAGTTTCTTACTACTCCAGGCAACAAAGTCTCTAGACAAGTACGTATAAGAGTATGAGGTTGACCTCCAATCGGTGACTAATACTGCATAGTGAGTTTATGTTTAGATTCCCACCACTTCTAGAAAATTCCCTCTACCCATTCTTGACTTAATGTGCTAAAGAATTTCCTTTATTGCTTGTACTCTTGGCCATTCATGAATATTGATAATGAACATCATCAACTCAGAAATGTATTCATCATTCTGAACTGAAGAGTAGCCTTGCAACCCAATTTATTGTGTCCTTAAGAAAATCAAGAACATGTTTGCTTTGGGAAATGAAGAGGCCTTGTTGCGAATAAGCAACTCCAACTACAAGCATTTTAGCTTTAGAGTATCCTTTGTGTCAAAGTCAATTGTTGGCTTTTCCTTCAACAGACGTCTCAACATACACAAGTCGTACAGTCTTCGTTTGTGGATCTCACCAATCAAGCACGAGAGATGGTTTCAATCATACGAAACATTATTCAATTTGCACACCATTCCTCAACTAAGGACCTCTTATTCAAGCAGAATCCCTATATAATTCTCCTCTAAATCTCCATGAAGAAATGCTTTGAATATTTGCATTATTTAATTTAGACTGTTGCAACTCTCATCTTTAATTACAAGCAAGAAAGAGTAGGATTCTGACCGTGTTCATCCTTGCCACTGGTGTAAATGTTTCTTTTTACAACTAGTTTGGCCTAATAACAATCATAAACATCCTTTTGCAAAAAGAAATCATTATGCTAGGCGGAGAGGGCCGTCCAGTTAGAAATCTATTTATTTAATATTAGAAAAAGTTCAAAATAACAATATTATGATGTTGATTACATTGTTGTCTTTATTTTTGGTTGAATGGAGGGAGTTCAAATATATGTAATGTAGTGAAGCACTATTGTAGTATCTGCCCAACTGTTGCAGTTGTAATGTAGTAAAGCACTACTGTAGTATCTGCCCAACTGGAAGCACTATTAAATTTATACATATCTGTGTGTATCCGAACTGATTTGGAATGCATGATAATTGTTGTATAACATTGCTAAATAATGAAGTGTCTGGTTACAGGCTTCTACTAAAATCCTGGCTCGGCAGCTAGTTAGGTTACGCCAACAGATAACTAATCTGCAGGGAAGTCGTGCACAGATCAGGGGTGTAGCAACTCACACACAGGTGCGCTAAAAAAATTCTTCTTTCTTTTCGAGGGTTAGCTTGAGTTTCATTTTTCATAATTTCCAAATTTCTTTTGTAGGCATTATATGCAAGCACTTCAATCTCTACAGGGATGAAGGGTGCCACTAAAGCAATGGTGGCAATGAATAAGGTATATTTTCTGGGTTGTTTCTGCTTTCCATTGTTCAAAATTTTGGACTACAATTATTTATGTTTTATAGTAATTATTGATATACAGAATCAGTTTATGACCCAAAGGGTAGAGGTTGTCTTGAACTCTTGATGTACCTTTGCCAAAGAAGCAAACAAAGCAACAAGTCCCATATGTTAAGAGTAACTTAACTTTCATAGGAAATGTTTGACAGAAGACTGGATATTTATGATTTCCATCCATGGTTTACACTTCAATACAAAAAAGTGCAAACAAAGCAACAAGTCCCATATGTTAAGAGTAACTTAACTTTCATAGGAAATGTTTGACAAAAAACTGGATATTTATGATTTCCATCCATGGTTTACACTTCAATACAAAAAAGTGCAAACAATTGTGCTTTCAACAATTCCTGTTTGCATTGAATCTAAAGTTTGTAATGTGTTAGATGCTTTTCTGGCATTGTTAAAGATTTTAAACTTTTGTGCTTATGACTAGAATGATACAATAATAATCATTACCTTGCTTATCTTCTCAGCAAATGGCACCGGCAAAGCAGGCTAAAGTGATTCAAGAATTCCAAAAGCAATCAGCACAACTGGACATGACGGTAATTTTATGCTTTTGTGTATATTTGTAATATGTTTTCATGCAAAATCAGTTAATTCTACACTGCTTTTAGTATTTTTTTGAGAGGGAGGCTGTTTGTTAGTTAACATGACAATTACCAAAGATTGCACACCACAATGAACAATTATTAGTCTTTTTTTTTGGCACTCCAATCCAGTGTTTCGCCAGTATTAGACTGTTGGGAACTTTTATGAAAATTTTTACGGTCTCTCAGCATTGTATGATCCACCAAAGGTGGTGCTTACTTAATAGAAATTTGGTTACTATAAATTAACAATATATTCCAGATAAAGAACTAATTGAAGGAACAACAATAAACTAGGAGTTAAATAAAGGTAACATGTTTAATTGTAAATGATAAGCAGCAGAAATAATGAAATTGAAGAGTATGGGGTATAGTATGATTTGTGAAACTGTCATCAAGATGGTACTTTTCAGCTGAAAACGAAAAAAATTAAAAGAAACCTGCCACTATACTGAAGACGATAGTGGGTGTGGTTTTTGCACTGGACAAATTTGTATTATATAGTGACAATAAAGAGAGAAAAAAACACAGAAGGAGAACTTGAGGTTGGAATAATAACAAATACTTTTGAAGATTGTGGGCAATAGAGAGGTTGTTGTATTTCAAAGACAGTGAAATTGAGAGCAGTAAGCAACAAAAAATGAAGTATCCAAACGTAAGTGTAAGAACTAAAATAAGTAAGGGTCAGAATATTGCTATGACGTGGGCTTCAAGCGACATACTTTAAACTACCAAAAGGGGAAACTTGTCACAGCAATTGGGGTTGCACCATGTGACTAGGAGGTCACAGGTTCAATTTGTGGAACCAGCTTCTAGCAAAAGCAAGGTAATGGTCGCTGCGATAGATCTGCAATGAATCCAGTACTCTGTTGTACTCAACCAGCTTCAATTTGTGGAACCAGCTTCTAGCAAAAGCAAGGTAATGGTCGCTACGATAGATCTGCAATGAATCCAGTACTCTGTTGTACTCAACCACGGCGAGGCGAGAGCTTTATCAACATCAAGTTTCTCTTTTATTACACATGTCAATTAGCTTGGTAATCTATTCAAGCAGATGTTGTGCTTGTGCCTGCCTGATAGCCTCATGGTAGTACTTAAAGCAGGCTCCAGCCATAGCATTAGATTATATATATTTTTTCTCTCCAAAATTTTATAATGTTATCCGAGATGCAGTTTGAGATGATGTCAGAAAATATTGATGAAACTTGGACTAAAATCTTTCTTTTCTCTCCAACAATTTATGTTATCCGAAATGCAGATTGAGATGATGTCAGAATCTATTGATGAAACTTTAGACAAAGATGAAGCTGAGGAAGAATCAGAAGAACTCACTAACCAGGTACATATACATAAATGACGAATATAATCATATAGCAGCACTTACTAGTACATATGTAAAGTTTCCTCTGTCATATCTGATTTTCATTTATTCATGACAGGTTCTTGATGAAATTGGAGTGGATATTGCATCCCAGGTTTGTTTTGAGCCCAATATTTCATTATGTTAGTCAGAGATTCAATATTAAAATCACGTGTTTTCACACAAGGCTTAGTTTATCGAATAGTTAGTTCATAGCATGGCATTAGAGCTTTTATGTGATTTCCTAAGAGTTTTCGAGTAGTTGGTTTATGACAAATCATTTGTCATTGCACTGATTCTTTAATTACTTTTATGAATATTGGGCCTGATTCTGTTTTTCTCTTCTTATGGTAGTTATCTTCTGCTCCGAAAGGTCGGATTGCTTCAAGGAATGCTGAAAATGCTGCTCCAAGGTATATTTCAATCTTATTCATGGACAGTGCTGCGTAGACACATCTACTTCTGTTATTGACTGCGTTTCTAAACCTCCATGTTGCTTTGTGCATGCAGATCAGAATCCCAAGATGTTGAAGAACTTGAAAAGAGATTGGCTTCTCTTCGAAGAATATAA
Protein sequence

>MS.gene033909.t1

MSVATRGIEREIASLQMEEKKLVAEIKREAKTGNEASTKILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMAPAKQAKVIQEFQKQSAQLDMTIEMMSESIDETLDKDEAEEESEELTNQVLDEIGVDIASQLSSAPKGRIASRNAENAAPRSESQDVEELEKRLASLRRI