Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75244.t1 | XP_013463763.1 | 100 | 196 | 0 | 0 | 1 | 196 | 21 | 216 | 3.20E-63 | 251.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75244.t1 | Q0WTY4 | 80.2 | 202 | 34 | 1 | 1 | 196 | 21 | 222 | 2.8e-52 | 206.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75244.t1 | B7FHD8 | 100.0 | 196 | 0 | 0 | 1 | 196 | 21 | 216 | 2.3e-63 | 251.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene051184 | MS.gene75244 | PPI |
| MS.gene09166 | MS.gene75244 | PPI |
| MS.gene23464 | MS.gene75244 | PPI |
| MS.gene049786 | MS.gene75244 | PPI |
| MS.gene75244 | MS.gene09111 | PPI |
| MS.gene75244 | MS.gene007726 | PPI |
| MS.gene75244 | MS.gene025196 | PPI |
| MS.gene018678 | MS.gene75244 | PPI |
| MS.gene96973 | MS.gene75244 | PPI |
| MS.gene020387 | MS.gene75244 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75244.t1 | MTR_2g047875 | 100.000 | 196 | 0 | 0 | 1 | 196 | 21 | 216 | 1.95e-139 | 388 |
| MS.gene75244.t1 | MTR_1g069715 | 73.711 | 194 | 47 | 1 | 1 | 194 | 486 | 675 | 5.87e-98 | 298 |
| MS.gene75244.t1 | MTR_7g097170 | 76.804 | 194 | 41 | 1 | 1 | 194 | 21 | 210 | 2.04e-92 | 269 |
| MS.gene75244.t1 | MTR_2g041190 | 40.201 | 199 | 113 | 1 | 4 | 196 | 25 | 223 | 2.48e-34 | 121 |
| MS.gene75244.t1 | MTR_8g019700 | 44.516 | 155 | 86 | 0 | 4 | 158 | 25 | 179 | 1.60e-32 | 117 |
| MS.gene75244.t1 | MTR_4g057565 | 28.788 | 198 | 133 | 1 | 5 | 194 | 29 | 226 | 2.31e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75244.t1 | AT5G44560 | 83.168 | 202 | 28 | 1 | 1 | 196 | 1 | 202 | 1.01e-115 | 327 |
| MS.gene75244.t1 | AT5G44560 | 83.168 | 202 | 28 | 1 | 1 | 196 | 21 | 222 | 1.99e-115 | 327 |
| MS.gene75244.t1 | AT5G44560 | 88.608 | 158 | 18 | 0 | 1 | 158 | 21 | 178 | 1.01e-99 | 286 |
| MS.gene75244.t1 | AT1G03950 | 72.165 | 194 | 50 | 1 | 1 | 194 | 21 | 210 | 8.59e-99 | 285 |
| MS.gene75244.t1 | AT5G44560 | 83.077 | 130 | 22 | 0 | 1 | 130 | 21 | 150 | 6.26e-74 | 220 |
| MS.gene75244.t1 | AT2G06530 | 40.500 | 200 | 112 | 1 | 4 | 196 | 5 | 204 | 5.52e-37 | 127 |
| MS.gene75244.t1 | AT2G06530 | 40.500 | 200 | 112 | 1 | 4 | 196 | 26 | 225 | 8.86e-37 | 127 |
Find 42 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACAGGTTCTTGATGAAAT+TGG | 0.228952 | 2.4:-43248818 | MS.gene75244:intron |
| CATTGCCACCATTGCTTTAG+TGG | 0.261194 | 2.4:+43250935 | None:intergenic |
| CCAGTTGTGCTGATTGCTTT+TGG | 0.285128 | 2.4:+43250327 | None:intergenic |
| TTTCAAGTTCTTCAACATCT+TGG | 0.321093 | 2.4:+43248372 | None:intergenic |
| ATCACTTTAGCCTGCTTTGC+CGG | 0.327935 | 2.4:+43250359 | None:intergenic |
| AGCAATGGTGGCAATGAATA+AGG | 0.349876 | 2.4:-43250928 | MS.gene75244:intron |
| TTCAAGTTCTTCAACATCTT+GGG | 0.356079 | 2.4:+43248373 | None:intergenic |
| AGGGAAGTCGTGCACAGATC+AGG | 0.381377 | 2.4:-43251101 | MS.gene75244:CDS |
| CTTGAAGCAATCCGACCTTT+CGG | 0.382816 | 2.4:+43248525 | None:intergenic |
| TGAAGAACTTGAAAAGAGAT+TGG | 0.400428 | 2.4:-43248363 | MS.gene75244:CDS |
| TCCTGGCTCGGCAGCTAGTT+AGG | 0.403556 | 2.4:-43251149 | MS.gene75244:CDS |
| CCAAAAGCAATCAGCACAAC+TGG | 0.415296 | 2.4:-43250327 | MS.gene75244:CDS |
| GCAAGCACTTCAATCTCTAC+AGG | 0.426499 | 2.4:-43250969 | MS.gene75244:CDS |
| CGAAAGGTCGGATTGCTTCA+AGG | 0.442942 | 2.4:-43248524 | MS.gene75244:CDS |
| TTCAATCTCTACAGGGATGA+AGG | 0.458265 | 2.4:-43250961 | MS.gene75244:CDS |
| TGGAGTGGATATTGCATCCC+AGG | 0.474380 | 2.4:-43248798 | MS.gene75244:intron |
| ACCTAACTAGCTGCCGAGCC+AGG | 0.485867 | 2.4:+43251148 | None:intergenic |
| GCAAATGGCACCGGCAAAGC+AGG | 0.491669 | 2.4:-43250369 | MS.gene75244:CDS |
| CCTGCAGATTAGTTATCTGT+TGG | 0.504006 | 2.4:+43251121 | None:intergenic |
| CCAACAGATAACTAATCTGC+AGG | 0.509427 | 2.4:-43251121 | MS.gene75244:CDS |
| GGGAAGTCGTGCACAGATCA+GGG | 0.524632 | 2.4:-43251100 | MS.gene75244:CDS |
| AGAGATAGCATCACTTCAGA+TGG | 0.527919 | 2.4:-43253391 | MS.gene75244:CDS |
| ACAGGCTTCTACTAAAATCC+TGG | 0.535270 | 2.4:-43251166 | MS.gene75244:intron |
| ATCTTCTCAGCAAATGGCAC+CGG | 0.537436 | 2.4:-43250378 | MS.gene75244:intron |
| AGTTGCAGAGATTAAAAGAG+AGG | 0.544597 | 2.4:-43253268 | MS.gene75244:CDS |
| GAAATGTCTGTTGCAACTAG+AGG | 0.569526 | 2.4:-43254306 | MS.gene75244:intron |
| TCAATCTCTACAGGGATGAA+GGG | 0.583879 | 2.4:-43250960 | MS.gene75244:CDS |
| TATCTTCTGCTCCGAAAGGT+CGG | 0.586806 | 2.4:-43248536 | MS.gene75244:CDS |
| CTTCTACTAAAATCCTGGCT+CGG | 0.598970 | 2.4:-43251161 | MS.gene75244:CDS |
| GGTTCTTGATGAAATTGGAG+TGG | 0.601589 | 2.4:-43248813 | MS.gene75244:CDS |
| ATGCTGAAAATGCTGCTCCA+AGG | 0.612137 | 2.4:-43248500 | MS.gene75244:intron |
| CAAGCACTTCAATCTCTACA+GGG | 0.614124 | 2.4:-43250968 | MS.gene75244:CDS |
| GATAGCATCACTTCAGATGG+AGG | 0.618277 | 2.4:-43253388 | MS.gene75244:intron |
| ATCAGCACAACTGGACATGA+CGG | 0.620669 | 2.4:-43250318 | MS.gene75244:intron |
| GGGTGCCACTAAAGCAATGG+TGG | 0.624027 | 2.4:-43250940 | MS.gene75244:CDS |
| GAAGGGTGCCACTAAAGCAA+TGG | 0.625367 | 2.4:-43250943 | MS.gene75244:CDS |
| ATCAGAAGAACTCACTAACC+AGG | 0.628471 | 2.4:-43248934 | MS.gene75244:intron |
| TAGTTATCTTCTGCTCCGAA+AGG | 0.634306 | 2.4:-43248540 | MS.gene75244:CDS |
| TTTAGACAAAGATGAAGCTG+AGG | 0.636787 | 2.4:-43248961 | MS.gene75244:CDS |
| GGAAGTCGTGCACAGATCAG+GGG | 0.664483 | 2.4:-43251099 | MS.gene75244:CDS |
| GGGTGTAGCAACTCACACAC+AGG | 0.671175 | 2.4:-43251079 | MS.gene75244:intron |
| CAACAGATAACTAATCTGCA+GGG | 0.676896 | 2.4:-43251120 | MS.gene75244:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTCATATATAAAATCAAA+TGG | + | chr2.4:43248469-43248488 | None:intergenic | 10.0% |
| !!! | AACTTTTATGAAAATTTTTA+CGG | - | chr2.4:43252553-43252572 | MS.gene75244:intron | 10.0% |
| !!! | TAATTACTTTTATGAATATT+GGG | - | chr2.4:43254056-43254075 | MS.gene75244:intron | 10.0% |
| !!! | TTAATTACTTTTATGAATAT+TGG | - | chr2.4:43254055-43254074 | MS.gene75244:intron | 10.0% |
| !!! | TTTTATTTAGATGTATATTT+GGG | - | chr2.4:43249455-43249474 | MS.gene75244:intron | 10.0% |
| !!! | TTTTTATTTAGATGTATATT+TGG | - | chr2.4:43249454-43249473 | MS.gene75244:intron | 10.0% |
| !! | ATATATATAATCTAATGCTA+TGG | + | chr2.4:43253508-43253527 | None:intergenic | 15.0% |
| !! | ATGATAAATATTTGTATGTT+TGG | + | chr2.4:43249662-43249681 | None:intergenic | 15.0% |
| !! | CATTAAAAAAAAACAGTTAA+AGG | - | chr2.4:43248903-43248922 | MS.gene75244:intron | 15.0% |
| !! | TAAATAAATAGATTTCTAAC+TGG | + | chr2.4:43251186-43251205 | None:intergenic | 15.0% |
| !!! | CAATTATTAGTCTTTTTTTT+TGG | - | chr2.4:43252491-43252510 | MS.gene75244:intron | 15.0% |
| !!! | CATTATTTTAAGGTATTATA+AGG | + | chr2.4:43248554-43248573 | None:intergenic | 15.0% |
| !!! | CTTTAACTGTTTTTTTTTAA+TGG | + | chr2.4:43248905-43248924 | None:intergenic | 15.0% |
| !!! | TAATTTTTTCCTATTTAGAA+AGG | + | chr2.4:43248531-43248550 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTCCTTTCTAAAT+AGG | - | chr2.4:43248519-43248538 | MS.gene75244:CDS | 15.0% |
| !! | AAAAATTGAATTTCAAGCTA+TGG | + | chr2.4:43250352-43250371 | None:intergenic | 20.0% |
| !! | AAATATTTGTATGTTTGGAT+TGG | + | chr2.4:43249657-43249676 | None:intergenic | 20.0% |
| !! | AATAAGATTGAAATATACCT+TGG | + | chr2.4:43254166-43254185 | None:intergenic | 20.0% |
| !! | AATAATGAAATTGAAGAGTA+TGG | - | chr2.4:43252739-43252758 | MS.gene75244:intron | 20.0% |
| !! | ACTATAGTTAAAGATTGTAT+TGG | + | chr2.4:43249932-43249951 | None:intergenic | 20.0% |
| !! | ATAAACTAGGAGTTAAATAA+AGG | - | chr2.4:43252683-43252702 | MS.gene75244:intron | 20.0% |
| !! | ATTTAGAGGAGAATTATATA+GGG | + | chr2.4:43250953-43250972 | None:intergenic | 20.0% |
| !! | GACTAACATAATGAAATATT+GGG | + | chr2.4:43253885-43253904 | None:intergenic | 20.0% |
| !! | GATCGTTTAAATACAAAAAT+TGG | + | chr2.4:43249988-43250007 | None:intergenic | 20.0% |
| !! | GTAAGAACTAAAATAAGTAA+GGG | - | chr2.4:43253056-43253075 | MS.gene75244:intron | 20.0% |
| !! | GTATATTTCAATCTTATTCA+TGG | - | chr2.4:43254168-43254187 | MS.gene75244:intron | 20.0% |
| !! | TCATTATCAATATTCATGAA+TGG | + | chr2.4:43250587-43250606 | None:intergenic | 20.0% |
| !! | TGACTAACATAATGAAATAT+TGG | + | chr2.4:43253886-43253905 | None:intergenic | 20.0% |
| !! | TGTAAGAACTAAAATAAGTA+AGG | - | chr2.4:43253055-43253074 | MS.gene75244:intron | 20.0% |
| !! | TTAAGTTACTCTTAACATAT+GGG | + | chr2.4:43251911-43251930 | None:intergenic | 20.0% |
| !!! | AATGAATAAGGTATATTTTC+TGG | - | chr2.4:43251730-43251749 | MS.gene75244:intron | 20.0% |
| !!! | AATTTCCAAATTTCTTTTGT+AGG | - | chr2.4:43251646-43251665 | MS.gene75244:intron | 20.0% |
| !!! | ATAATGAAATTGAAGAGTAT+GGG | - | chr2.4:43252740-43252759 | MS.gene75244:intron | 20.0% |
| !!! | ATGAATAAGGTATATTTTCT+GGG | - | chr2.4:43251731-43251750 | MS.gene75244:intron | 20.0% |
| !!! | CGGATAACATTATAAAATTT+TGG | + | chr2.4:43253540-43253559 | None:intergenic | 20.0% |
| !!! | CTTTTAGTATTTTTTTGAGA+GGG | - | chr2.4:43252415-43252434 | MS.gene75244:intron | 20.0% |
| !!! | TAATGATTTCTTTTTGCAAA+AGG | + | chr2.4:43251143-43251162 | None:intergenic | 20.0% |
| !!! | TACATTGTTGTCTTTATTTT+TGG | - | chr2.4:43251247-43251266 | MS.gene75244:intron | 20.0% |
| ! | AAAAATTGGATTTCAAGCTA+TGG | + | chr2.4:43249974-43249993 | None:intergenic | 25.0% |
| ! | AAGAGTAACTTAACTTTCAT+AGG | - | chr2.4:43251918-43251937 | MS.gene75244:intron | 25.0% |
| ! | ACAACACTTCATCAAATAAA+AGG | + | chr2.4:43249798-43249817 | None:intergenic | 25.0% |
| ! | ACATACTTTAAACTACCAAA+AGG | - | chr2.4:43253111-43253130 | MS.gene75244:intron | 25.0% |
| ! | AGACTAATAATTGTTCATTG+TGG | + | chr2.4:43252484-43252503 | None:intergenic | 25.0% |
| ! | ATAAAGGTCTGATTACTAAA+CGG | + | chr2.4:43249773-43249792 | None:intergenic | 25.0% |
| ! | ATAACTTCTTTCTTTCTTGT+AGG | - | chr2.4:43249223-43249242 | MS.gene75244:intron | 25.0% |
| ! | ATACTTTAAACTACCAAAAG+GGG | - | chr2.4:43253113-43253132 | MS.gene75244:intron | 25.0% |
| ! | ATATTTATGATTTCCATCCA+TGG | - | chr2.4:43251962-43251981 | MS.gene75244:intron | 25.0% |
| ! | ATCAATTGCTAGAATAGAAA+AGG | - | chr2.4:43248488-43248507 | MS.gene75244:intron | 25.0% |
| ! | CAAAAAGAAATCATTATGCT+AGG | - | chr2.4:43251147-43251166 | MS.gene75244:CDS | 25.0% |
| ! | CAGAAAATATTGATGAAACT+TGG | - | chr2.4:43253581-43253600 | MS.gene75244:intron | 25.0% |
| ! | CATACTTTAAACTACCAAAA+GGG | - | chr2.4:43253112-43253131 | MS.gene75244:intron | 25.0% |
| ! | CATCAAATAAAAGGTGATAA+AGG | + | chr2.4:43249789-43249808 | None:intergenic | 25.0% |
| ! | GAGAAATAAGAAAGAACAAA+AGG | + | chr2.4:43249138-43249157 | None:intergenic | 25.0% |
| ! | GATTTAGAGGAGAATTATAT+AGG | + | chr2.4:43250954-43250973 | None:intergenic | 25.0% |
| ! | GTGCTTACTTAATAGAAATT+TGG | - | chr2.4:43252607-43252626 | MS.gene75244:intron | 25.0% |
| ! | GTTAAGTTACTCTTAACATA+TGG | + | chr2.4:43251912-43251931 | None:intergenic | 25.0% |
| ! | TAAATAGATTTCTAACTGGA+CGG | + | chr2.4:43251182-43251201 | None:intergenic | 25.0% |
| ! | TAATGCCTACAAAAGAAATT+TGG | + | chr2.4:43251654-43251673 | None:intergenic | 25.0% |
| ! | TCTTAAGGACACAATAAATT+GGG | + | chr2.4:43250665-43250684 | None:intergenic | 25.0% |
| ! | TTCTTAAGGACACAATAAAT+TGG | + | chr2.4:43250666-43250685 | None:intergenic | 25.0% |
| ! | TTTCGGATAACATAAATTGT+TGG | + | chr2.4:43253628-43253647 | None:intergenic | 25.0% |
| !! | AAAATTCTTCTTTCTTTTCG+AGG | - | chr2.4:43251599-43251618 | MS.gene75244:intron | 25.0% |
| !! | AAATTCTTCTTTCTTTTCGA+GGG | - | chr2.4:43251600-43251619 | MS.gene75244:intron | 25.0% |
| !! | ACATGTTCTTGATTTTCTTA+AGG | + | chr2.4:43250680-43250699 | None:intergenic | 25.0% |
| !! | ATATTCAAAGCATTTCTTCA+TGG | + | chr2.4:43250978-43250997 | None:intergenic | 25.0% |
| !! | CTTTCCATTGTTCAAAATTT+TGG | - | chr2.4:43251763-43251782 | MS.gene75244:intron | 25.0% |
| !! | GATTTTCATTTATTCATGAC+AGG | - | chr2.4:43253812-43253831 | MS.gene75244:intron | 25.0% |
| !! | GGATGTTTATGATTGTTATT+AGG | + | chr2.4:43251122-43251141 | None:intergenic | 25.0% |
| !! | GTTTCTTTTTACAACTAGTT+TGG | - | chr2.4:43251096-43251115 | MS.gene75244:CDS | 25.0% |
| !! | TAATGAAATTGAAGAGTATG+GGG | - | chr2.4:43252741-43252760 | MS.gene75244:intron | 25.0% |
| !! | TAGTCCAAAATTTTGAACAA+TGG | + | chr2.4:43251770-43251789 | None:intergenic | 25.0% |
| !! | TATAAGCTATGAAGCATTTA+CGG | + | chr2.4:43248702-43248721 | None:intergenic | 25.0% |
| !! | TGATTTGAGTTAATGGTTAA+AGG | - | chr2.4:43248807-43248826 | MS.gene75244:CDS | 25.0% |
| !!! | ACAAATACTTTTGAAGATTG+TGG | - | chr2.4:43252952-43252971 | MS.gene75244:intron | 25.0% |
| !!! | ATTCTGTTTTTCTCTTCTTA+TGG | - | chr2.4:43254083-43254102 | MS.gene75244:intron | 25.0% |
| !!! | CAAATACTTTTGAAGATTGT+GGG | - | chr2.4:43252953-43252972 | MS.gene75244:intron | 25.0% |
| !!! | GCTTTTAGTATTTTTTTGAG+AGG | - | chr2.4:43252414-43252433 | MS.gene75244:intron | 25.0% |
| !!! | TGTCTTTATTTTTGGTTGAA+TGG | - | chr2.4:43251255-43251274 | MS.gene75244:intron | 25.0% |
| !!! | TTTATTTTTGGTTGAATGGA+GGG | - | chr2.4:43251259-43251278 | MS.gene75244:intron | 25.0% |
| AAAAGAAACATTTACACCAG+TGG | + | chr2.4:43251085-43251104 | None:intergenic | 30.0% | |
| AAAGAAATCATTATGCTAGG+CGG | - | chr2.4:43251150-43251169 | MS.gene75244:CDS | 30.0% | |
| AAAGCAGTTTCAAGATCTTA+TGG | + | chr2.4:43249696-43249715 | None:intergenic | 30.0% | |
| AAAGCTAAAATGCTTGTAGT+TGG | + | chr2.4:43250745-43250764 | None:intergenic | 30.0% | |
| AAGAAGAGAAAAACAGAATC+AGG | + | chr2.4:43254082-43254101 | None:intergenic | 30.0% | |
| AAGAGAGAAAAAAACACAGA+AGG | - | chr2.4:43252907-43252926 | MS.gene75244:intron | 30.0% | |
| AATCAAGAACATGTTTGCTT+TGG | - | chr2.4:43250686-43250705 | MS.gene75244:intron | 30.0% | |
| AATTACAAGCAAGAAAGAGT+AGG | - | chr2.4:43251037-43251056 | MS.gene75244:intron | 30.0% | |
| AATTTAATAGTGCTTCCAGT+TGG | + | chr2.4:43251377-43251396 | None:intergenic | 30.0% | |
| ACTATAGTTGAAGGTTGTAT+TGG | + | chr2.4:43250310-43250329 | None:intergenic | 30.0% | |
| ACTTTAGATTCAATGCAAAC+AGG | + | chr2.4:43252154-43252173 | None:intergenic | 30.0% | |
| AGAAGTTTCGTATTTAGTTG+AGG | - | chr2.4:43249902-43249921 | MS.gene75244:intron | 30.0% | |
| ATATAATCTAATGCTATGGC+TGG | + | chr2.4:43253504-43253523 | None:intergenic | 30.0% | |
| ATCAAATAGTAGAAGGTGAA+GGG | - | chr2.4:43248751-43248770 | MS.gene75244:intron | 30.0% | |
| ATCAAGAACATGTTTGCTTT+GGG | - | chr2.4:43250687-43250706 | MS.gene75244:intron | 30.0% | |
| ATGAAAATCAGATATGACAG+AGG | + | chr2.4:43253801-43253820 | None:intergenic | 30.0% | |
| ATGTCAGTAACTATAGTTGA+AGG | + | chr2.4:43250319-43250338 | None:intergenic | 30.0% | |
| ATTAAAAGAGAGGCAAAAAC+TGG | - | chr2.4:43249388-43249407 | MS.gene75244:intron | 30.0% | |
| ATTACACATGTCAATTAGCT+TGG | - | chr2.4:43253410-43253429 | MS.gene75244:intron | 30.0% | |
| ATTGTATGAAGAAAACTCCA+AGG | + | chr2.4:43249068-43249087 | None:intergenic | 30.0% | |
| ATTTAATAGTGCTTCCAGTT+GGG | + | chr2.4:43251376-43251395 | None:intergenic | 30.0% | |
| ATTTCTTCATGGAGATTTAG+AGG | + | chr2.4:43250967-43250986 | None:intergenic | 30.0% | |
| CATCAAACAAAAGGTGATAA+AGG | + | chr2.4:43250169-43250188 | None:intergenic | 30.0% | |
| CCAGATAAAGAACTAATTGA+AGG | - | chr2.4:43252653-43252672 | MS.gene75244:intron | 30.0% | |
| GAATAAGTGTATGTTTGATC+TGG | - | chr2.4:43249576-43249595 | MS.gene75244:intron | 30.0% | |
| GAGTTAATGGTTAAAGGATT+TGG | - | chr2.4:43248813-43248832 | MS.gene75244:CDS | 30.0% | |
| GCTTCATAGCTTATAATGTT+TGG | - | chr2.4:43248707-43248726 | MS.gene75244:intron | 30.0% | |
| GGAAATGTTTGACAAAAAAC+TGG | - | chr2.4:43252057-43252076 | MS.gene75244:intron | 30.0% | |
| GTCATTTATGTATATGTACC+TGG | + | chr2.4:43253733-43253752 | None:intergenic | 30.0% | |
| TAAAGGTCTGATTACTAAAC+GGG | + | chr2.4:43250152-43250171 | None:intergenic | 30.0% | |
| TAGCACATTAAGTCAAGAAT+GGG | + | chr2.4:43250534-43250553 | None:intergenic | 30.0% | |
| TATGAGTTAGCAAAGCTTTA+TGG | - | chr2.4:43248946-43248965 | MS.gene75244:CDS | 30.0% | |
| TGAAGAACTTGAAAAGAGAT+TGG | - | chr2.4:43254283-43254302 | MS.gene75244:intron | 30.0% | |
| TGAAGGAACAACAATAAACT+AGG | - | chr2.4:43252670-43252689 | MS.gene75244:intron | 30.0% | |
| TTAATGGTTAAAGGATTTGG+AGG | - | chr2.4:43248816-43248835 | MS.gene75244:intron | 30.0% | |
| TTACTAAATGTGTGTTCCTT+TGG | + | chr2.4:43249761-43249780 | None:intergenic | 30.0% | |
| TTAGCACATTAAGTCAAGAA+TGG | + | chr2.4:43250535-43250554 | None:intergenic | 30.0% | |
| TTGTATGAAGAAAACTCCAA+GGG | + | chr2.4:43249067-43249086 | None:intergenic | 30.0% | |
| TTGTATTGAAGTGTAAACCA+TGG | + | chr2.4:43251982-43252001 | None:intergenic | 30.0% | |
| TTTGTGTCAAAGTCAATTGT+TGG | - | chr2.4:43250774-43250793 | MS.gene75244:intron | 30.0% | |
| ! | AACAATTGACTTTGACACAA+AGG | + | chr2.4:43250775-43250794 | None:intergenic | 30.0% |
| ! | CCTTCAATTAGTTCTTTATC+TGG | + | chr2.4:43252656-43252675 | None:intergenic | 30.0% |
| ! | TAATGTGTTAGATGCTTTTC+TGG | - | chr2.4:43252177-43252196 | MS.gene75244:intron | 30.0% |
| ! | TAGCTTATAATGTTTGGAGT+TGG | - | chr2.4:43248713-43248732 | MS.gene75244:intron | 30.0% |
| ! | TTAGTTCTTACACTTACGTT+TGG | + | chr2.4:43253047-43253066 | None:intergenic | 30.0% |
| ! | TTCAAGTTCTTCAACATCTT+GGG | + | chr2.4:43254276-43254295 | None:intergenic | 30.0% |
| ! | TTGCTAAATAATGAAGTGTC+TGG | - | chr2.4:43251455-43251474 | MS.gene75244:intron | 30.0% |
| !! | TTTCAAGTTCTTCAACATCT+TGG | + | chr2.4:43254277-43254296 | None:intergenic | 30.0% |
| !!! | CTTTATTTTTGGTTGAATGG+AGG | - | chr2.4:43251258-43251277 | MS.gene75244:intron | 30.0% |
| !!! | TTAGTATTTTTTTGAGAGGG+AGG | - | chr2.4:43252418-43252437 | MS.gene75244:intron | 30.0% |
| ACATTACAACTGCAACAGTT+GGG | + | chr2.4:43251329-43251348 | None:intergenic | 35.0% | |
| ACGACACTTCATCAAACAAA+AGG | + | chr2.4:43250178-43250197 | None:intergenic | 35.0% | |
| ACTATACTGAAGACGATAGT+GGG | - | chr2.4:43252840-43252859 | MS.gene75244:intron | 35.0% | |
| AGAAGCTCCATATTTAGTTG+AGG | - | chr2.4:43250280-43250299 | MS.gene75244:intron | 35.0% | |
| AGAATCAGTTTATGACCCAA+AGG | - | chr2.4:43251825-43251844 | MS.gene75244:intron | 35.0% | |
| AGTTGCAGAGATTAAAAGAG+AGG | - | chr2.4:43249378-43249397 | MS.gene75244:intron | 35.0% | |
| AGTTGCGATCAAATAGTAGA+AGG | - | chr2.4:43248744-43248763 | MS.gene75244:intron | 35.0% | |
| ATTAAGTCAAGAATGGGTAG+AGG | + | chr2.4:43250528-43250547 | None:intergenic | 35.0% | |
| ATTGAAGTGTAAACCATGGA+TGG | + | chr2.4:43251978-43251997 | None:intergenic | 35.0% | |
| CAACAGATAACTAATCTGCA+GGG | - | chr2.4:43251526-43251545 | MS.gene75244:intron | 35.0% | |
| CATCATCTCAATCTGCATTT+CGG | + | chr2.4:43253645-43253664 | None:intergenic | 35.0% | |
| CCAAATTATTACCGTGTTGA+CGG | - | chr2.4:43248668-43248687 | MS.gene75244:intron | 35.0% | |
| CGAATTGTTAGTTCATAGCA+TGG | - | chr2.4:43253953-43253972 | MS.gene75244:intron | 35.0% | |
| CGATGAGTTTGACAAAATCA+CGG | + | chr2.4:43249634-43249653 | None:intergenic | 35.0% | |
| CTTGAATGTAACCAATGTGT+CGG | + | chr2.4:43248636-43248655 | None:intergenic | 35.0% | |
| GAATCAGTTTATGACCCAAA+GGG | - | chr2.4:43251826-43251845 | MS.gene75244:intron | 35.0% | |
| GACATTGATAGAAGTTAGCA+AGG | - | chr2.4:43249172-43249191 | MS.gene75244:intron | 35.0% | |
| GATCAAATAGTAGAAGGTGA+AGG | - | chr2.4:43248750-43248769 | MS.gene75244:intron | 35.0% | |
| TACATTACAACTGCAACAGT+TGG | + | chr2.4:43251330-43251349 | None:intergenic | 35.0% | |
| TAGTTGAAGGTTGTATTGGA+TGG | + | chr2.4:43250306-43250325 | None:intergenic | 35.0% | |
| TATTAAGTAAGCACCACCTT+TGG | + | chr2.4:43252601-43252620 | None:intergenic | 35.0% | |
| TCAGAATATTGCTATGACGT+GGG | - | chr2.4:43253079-43253098 | MS.gene75244:intron | 35.0% | |
| TCATGCATTCCAAATCAGTT+CGG | + | chr2.4:43251419-43251438 | None:intergenic | 35.0% | |
| TCCTTTATTGCTTGTACTCT+TGG | - | chr2.4:43250561-43250580 | MS.gene75244:intron | 35.0% | |
| TGACAGGTTCTTGATGAAAT+TGG | - | chr2.4:43253828-43253847 | MS.gene75244:intron | 35.0% | |
| TGTAAAAACTTTGTTGCCTC+TGG | + | chr2.4:43250035-43250054 | None:intergenic | 35.0% | |
| TTAAGTCAAGAATGGGTAGA+GGG | + | chr2.4:43250527-43250546 | None:intergenic | 35.0% | |
| TTCATCTTAACTGGGATCAA+AGG | - | chr2.4:43249482-43249501 | MS.gene75244:intron | 35.0% | |
| TTCTAGCAAAAGCAAGGTAA+TGG | - | chr2.4:43253205-43253224 | MS.gene75244:intron | 35.0% | |
| TTCTAGCAAAAGCAAGGTAT+TGG | - | chr2.4:43253298-43253317 | MS.gene75244:intron | 35.0% | |
| TTGCTTATCTTCTCAGCAAA+TGG | - | chr2.4:43252262-43252281 | MS.gene75244:intron | 35.0% | |
| TTGTGAAACTGTCATCAAGA+TGG | - | chr2.4:43252775-43252794 | MS.gene75244:intron | 35.0% | |
| TTTAGACAAAGATGAAGCTG+AGG | - | chr2.4:43253685-43253704 | MS.gene75244:intron | 35.0% | |
| TTTGTTTGCTTCTTTGGCAA+AGG | + | chr2.4:43251879-43251898 | None:intergenic | 35.0% | |
| ! | AAATCACGTGTTTTCACACA+AGG | - | chr2.4:43253920-43253939 | MS.gene75244:intron | 35.0% |
| ! | ACACAATAAATTGGGTTGCA+AGG | + | chr2.4:43250657-43250676 | None:intergenic | 35.0% |
| ! | AGATTATGAGCATTGCCAAT+AGG | - | chr2.4:43249852-43249871 | MS.gene75244:intron | 35.0% |
| ! | ATAATGAAGTGTCTGGTTAC+AGG | - | chr2.4:43251462-43251481 | MS.gene75244:intron | 35.0% |
| ! | ATTTGCTGAGAAGATAAGCA+AGG | + | chr2.4:43252263-43252282 | None:intergenic | 35.0% |
| ! | CAAGTACGTATAAGAGTATG+AGG | - | chr2.4:43250431-43250450 | MS.gene75244:intron | 35.0% |
| ! | GCTCATCTGATTTGAGTTAA+TGG | - | chr2.4:43248800-43248819 | MS.gene75244:CDS | 35.0% |
| ! | TGGGTGTTTTCATCTTAACT+GGG | - | chr2.4:43249474-43249493 | MS.gene75244:intron | 35.0% |
| ! | TTGGGTGTTTTCATCTTAAC+TGG | - | chr2.4:43249473-43249492 | MS.gene75244:intron | 35.0% |
| !! | ACATCAATTGGTAGCTTTGT+TGG | + | chr2.4:43249738-43249757 | None:intergenic | 35.0% |
| !! | TAGAGGGAATTTTCTAGAAG+TGG | + | chr2.4:43250511-43250530 | None:intergenic | 35.0% |
| !! | TGTTGCTTTGTTTGCTTCTT+TGG | + | chr2.4:43251885-43251904 | None:intergenic | 35.0% |
| AAACACAGAAGGAGAACTTG+AGG | - | chr2.4:43252918-43252937 | MS.gene75244:intron | 40.0% | |
| AAACATTTACACCAGTGGCA+AGG | + | chr2.4:43251080-43251099 | None:intergenic | 40.0% | |
| AAATAGTAGAAGGTGAAGGG+TGG | - | chr2.4:43248754-43248773 | MS.gene75244:intron | 40.0% | |
| AATAGTAGAAGGTGAAGGGT+GGG | - | chr2.4:43248755-43248774 | MS.gene75244:intron | 40.0% | |
| ACAGGCTTCTACTAAAATCC+TGG | - | chr2.4:43251480-43251499 | MS.gene75244:intron | 40.0% | |
| ACTCAACCAGCTTCAATTTG+TGG | - | chr2.4:43253268-43253287 | MS.gene75244:CDS | 40.0% | |
| AGAGATAGCATCACTTCAGA+TGG | - | chr2.4:43249255-43249274 | MS.gene75244:intron | 40.0% | |
| AGAGGCAAAAACTGGAAATG+AGG | - | chr2.4:43249396-43249415 | MS.gene75244:intron | 40.0% | |
| AGCAATGGTGGCAATGAATA+AGG | - | chr2.4:43251718-43251737 | MS.gene75244:intron | 40.0% | |
| AGCATTGTATGATCCACCAA+AGG | - | chr2.4:43252582-43252601 | MS.gene75244:intron | 40.0% | |
| AGCTACCAATTGATGTCCAA+AGG | - | chr2.4:43249742-43249761 | MS.gene75244:intron | 40.0% | |
| AGGGATTCTGCTTGAATAAG+AGG | + | chr2.4:43250934-43250953 | None:intergenic | 40.0% | |
| AGTTCCCAACAGTCTAATAC+TGG | + | chr2.4:43252537-43252556 | None:intergenic | 40.0% | |
| AGTTTGACAAAATCACGGTG+TGG | + | chr2.4:43249629-43249648 | None:intergenic | 40.0% | |
| ATCAGAAGAACTCACTAACC+AGG | - | chr2.4:43253712-43253731 | MS.gene75244:intron | 40.0% | |
| ATGCAGTATCAGTCATCGAT+TGG | + | chr2.4:43250088-43250107 | None:intergenic | 40.0% | |
| ATGCAGTATTAGTCACCGAT+TGG | + | chr2.4:43250464-43250483 | None:intergenic | 40.0% | |
| ATTGGGCTCAAAACAAACCT+GGG | + | chr2.4:43253868-43253887 | None:intergenic | 40.0% | |
| ATTGTATGATCCACCAAAGG+TGG | - | chr2.4:43252585-43252604 | MS.gene75244:intron | 40.0% | |
| CAAGCACTTCAATCTCTACA+GGG | - | chr2.4:43251678-43251697 | MS.gene75244:intron | 40.0% | |
| CAAGGCAGTTAAGCACTAAA+AGG | + | chr2.4:43249337-43249356 | None:intergenic | 40.0% | |
| CACTATACTGAAGACGATAG+TGG | - | chr2.4:43252839-43252858 | MS.gene75244:intron | 40.0% | |
| CACTATCGTCTTCAGTATAG+TGG | + | chr2.4:43252841-43252860 | None:intergenic | 40.0% | |
| CATCATCTCAAACTGCATCT+CGG | + | chr2.4:43253560-43253579 | None:intergenic | 40.0% | |
| CCAACAGATAACTAATCTGC+AGG | - | chr2.4:43251525-43251544 | MS.gene75244:intron | 40.0% | |
| CCAACTACTCGAAAACTCTT+AGG | + | chr2.4:43254001-43254020 | None:intergenic | 40.0% | |
| CCGTCAACACGGTAATAATT+TGG | + | chr2.4:43248671-43248690 | None:intergenic | 40.0% | |
| CTCATGGTAGTACTTAAAGC+AGG | - | chr2.4:43253476-43253495 | MS.gene75244:intron | 40.0% | |
| CTTCTACTAAAATCCTGGCT+CGG | - | chr2.4:43251485-43251504 | MS.gene75244:intron | 40.0% | |
| GAAACTTGTCACAGCAATTG+GGG | - | chr2.4:43253135-43253154 | MS.gene75244:intron | 40.0% | |
| GAATAAGAGGTCCTTAGTTG+AGG | + | chr2.4:43250921-43250940 | None:intergenic | 40.0% | |
| GAATTTCAAGCTATGGCTCA+AGG | + | chr2.4:43250345-43250364 | None:intergenic | 40.0% | |
| GGAAACTTGTCACAGCAATT+GGG | - | chr2.4:43253134-43253153 | MS.gene75244:intron | 40.0% | |
| GGAAATGTTTGACAGAAGAC+TGG | - | chr2.4:43251939-43251958 | MS.gene75244:intron | 40.0% | |
| GGTTCTTGATGAAATTGGAG+TGG | - | chr2.4:43253833-43253852 | MS.gene75244:intron | 40.0% | |
| GTCAGAATATTGCTATGACG+TGG | - | chr2.4:43253078-43253097 | MS.gene75244:intron | 40.0% | |
| GTCTGATTACTAAACGGGTA+GGG | + | chr2.4:43250147-43250166 | None:intergenic | 40.0% | |
| GTGTTCCTTTGGACATCAAT+TGG | + | chr2.4:43249750-43249769 | None:intergenic | 40.0% | |
| GTTCAGTTTCTTACTACTCC+AGG | - | chr2.4:43250392-43250411 | MS.gene75244:intron | 40.0% | |
| GTTTGACAAAATCACGGTGT+GGG | + | chr2.4:43249628-43249647 | None:intergenic | 40.0% | |
| TACTCTGTTGTACTCAACCA+CGG | - | chr2.4:43253257-43253276 | MS.gene75244:CDS | 40.0% | |
| TAGTTATCTTCTGCTCCGAA+AGG | - | chr2.4:43254106-43254125 | MS.gene75244:intron | 40.0% | |
| TATGTTGAGACGTCTGTTGA+AGG | + | chr2.4:43250805-43250824 | None:intergenic | 40.0% | |
| TATTGGGCTCAAAACAAACC+TGG | + | chr2.4:43253869-43253888 | None:intergenic | 40.0% | |
| TCAATCTCTACAGGGATGAA+GGG | - | chr2.4:43251686-43251705 | MS.gene75244:intron | 40.0% | |
| TCATTGTGGTGTGCAATCTT+TGG | + | chr2.4:43252470-43252489 | None:intergenic | 40.0% | |
| TCTGATTACTAAACGGGTAG+GGG | + | chr2.4:43250146-43250165 | None:intergenic | 40.0% | |
| TGAAGAAAACTCCAAGGGTT+TGG | + | chr2.4:43249062-43249081 | None:intergenic | 40.0% | |
| TGGATGGCCTCAACTAAATA+TGG | + | chr2.4:43250290-43250309 | None:intergenic | 40.0% | |
| TGTGTGTATCCGAACTGATT+TGG | - | chr2.4:43251407-43251426 | MS.gene75244:intron | 40.0% | |
| TGTTTGATCTGGCAGTTGAA+TGG | - | chr2.4:43249587-43249606 | MS.gene75244:intron | 40.0% | |
| TTAAAGGATTTGGAGGTCCT+TGG | - | chr2.4:43248823-43248842 | MS.gene75244:intron | 40.0% | |
| TTACATTTACCTCCCTCCAA+GGG | - | chr2.4:43248984-43249003 | MS.gene75244:CDS | 40.0% | |
| TTCAATCTCTACAGGGATGA+AGG | - | chr2.4:43251685-43251704 | MS.gene75244:intron | 40.0% | |
| TTCGCCAGTATTAGACTGTT+GGG | - | chr2.4:43252530-43252549 | MS.gene75244:intron | 40.0% | |
| TTTACATTTACCTCCCTCCA+AGG | - | chr2.4:43248983-43249002 | MS.gene75244:CDS | 40.0% | |
| TTTCGCCAGTATTAGACTGT+TGG | - | chr2.4:43252529-43252548 | MS.gene75244:intron | 40.0% | |
| ! | AGATTATGAGCATTGCCAGT+AGG | - | chr2.4:43250231-43250250 | MS.gene75244:intron | 40.0% |
| ! | AGCTTTATGGCACTCACAAA+TGG | - | chr2.4:43248959-43248978 | MS.gene75244:CDS | 40.0% |
| ! | CAAGTGCGTATAAGAGTATG+AGG | - | chr2.4:43250055-43250074 | MS.gene75244:intron | 40.0% |
| ! | CCTGCAGATTAGTTATCTGT+TGG | + | chr2.4:43251528-43251547 | None:intergenic | 40.0% |
| ! | CTGCTTTAAGTACTACCATG+AGG | + | chr2.4:43253478-43253497 | None:intergenic | 40.0% |
| ! | GCAACTAACTTCTTTTCCTG+CGG | + | chr2.4:43249364-43249383 | None:intergenic | 40.0% |
| ! | GCCAAGAGTACAAGCAATAA+AGG | + | chr2.4:43250565-43250584 | None:intergenic | 40.0% |
| ! | TTATGAGCATTGCCAATAGG+CGG | - | chr2.4:43249855-43249874 | MS.gene75244:intron | 40.0% |
| !! | AGGGAATTTTCTAGAAGTGG+TGG | + | chr2.4:43250508-43250527 | None:intergenic | 40.0% |
| !! | GGGAATTTTCTAGAAGTGGT+GGG | + | chr2.4:43250507-43250526 | None:intergenic | 40.0% |
| !! | GTTTGCTTTGGGAAATGAAG+AGG | - | chr2.4:43250698-43250717 | MS.gene75244:intron | 40.0% |
| !! | TTGGTAGCTTTGTTGGTTAC+AGG | + | chr2.4:43249731-43249750 | None:intergenic | 40.0% |
| !!! | ATTGCCAATAGGCGGTTTTT+TGG | - | chr2.4:43249863-43249882 | MS.gene75244:intron | 40.0% |
| !!! | CCTAAGAGTTTTCGAGTAGT+TGG | - | chr2.4:43253998-43254017 | MS.gene75244:intron | 40.0% |
| AACCATCTCTCGTGCTTGAT+TGG | + | chr2.4:43250861-43250880 | None:intergenic | 45.0% | |
| AATCATTATGCTAGGCGGAG+AGG | - | chr2.4:43251155-43251174 | MS.gene75244:CDS | 45.0% | |
| ACAGAAGGAGAACTTGAGGT+TGG | - | chr2.4:43252922-43252941 | MS.gene75244:intron | 45.0% | |
| ACCAGCTTCTAGCAAAAGCA+AGG | - | chr2.4:43253199-43253218 | MS.gene75244:intron | 45.0% | |
| AGAGGTCCTTAGTTGAGGAA+TGG | + | chr2.4:43250916-43250935 | None:intergenic | 45.0% | |
| AGTACTACCATGAGGCTATC+AGG | + | chr2.4:43253470-43253489 | None:intergenic | 45.0% | |
| AGTCGTACAGTCTTCGTTTG+TGG | - | chr2.4:43250829-43250848 | MS.gene75244:intron | 45.0% | |
| ATACTGGCGAAACACTGGAT+TGG | + | chr2.4:43252521-43252540 | None:intergenic | 45.0% | |
| ATAGTAGAAGGTGAAGGGTG+GGG | - | chr2.4:43248756-43248775 | MS.gene75244:intron | 45.0% | |
| ATCACTTTAGCCTGCTTTGC+CGG | + | chr2.4:43252290-43252309 | None:intergenic | 45.0% | |
| ATCAGCACAACTGGACATGA+CGG | - | chr2.4:43252328-43252347 | MS.gene75244:intron | 45.0% | |
| ATCATTATGCTAGGCGGAGA+GGG | - | chr2.4:43251156-43251175 | MS.gene75244:CDS | 45.0% | |
| ATCCACTCTCTCTCTAGTTG+AGG | - | chr2.4:43249554-43249573 | MS.gene75244:intron | 45.0% | |
| ATCGTCTTCAGTATAGTGGC+AGG | + | chr2.4:43252837-43252856 | None:intergenic | 45.0% | |
| ATCTTCTCAGCAAATGGCAC+CGG | - | chr2.4:43252268-43252287 | MS.gene75244:intron | 45.0% | |
| ATGCTGAAAATGCTGCTCCA+AGG | - | chr2.4:43254146-43254165 | MS.gene75244:intron | 45.0% | |
| CAAGACAACCTCTACCCTTT+GGG | + | chr2.4:43251843-43251862 | None:intergenic | 45.0% | |
| CATCGACACTTCACACATTG+AGG | - | chr2.4:43248605-43248624 | MS.gene75244:intron | 45.0% | |
| CATTGCCACCATTGCTTTAG+TGG | + | chr2.4:43251714-43251733 | None:intergenic | 45.0% | |
| CCAAAAGCAATCAGCACAAC+TGG | - | chr2.4:43252319-43252338 | MS.gene75244:intron | 45.0% | |
| CGGACATTTAACCGTCAACA+CGG | + | chr2.4:43248682-43248701 | None:intergenic | 45.0% | |
| CTGATTACTAAACGGGTAGG+GGG | + | chr2.4:43250145-43250164 | None:intergenic | 45.0% | |
| CTGGTTCCACAAATTGAAGC+TGG | + | chr2.4:43253277-43253296 | None:intergenic | 45.0% | |
| CTTGAAGCAATCCGACCTTT+CGG | + | chr2.4:43254124-43254143 | None:intergenic | 45.0% | |
| GAAGATTGTGGGCAATAGAG+AGG | - | chr2.4:43252964-43252983 | MS.gene75244:intron | 45.0% | |
| GAGGTCACAGGTTCAATTTG+TGG | - | chr2.4:43253175-43253194 | MS.gene75244:intron | 45.0% | |
| GATAGCATCACTTCAGATGG+AGG | - | chr2.4:43249258-43249277 | MS.gene75244:intron | 45.0% | |
| GCAAGCACTTCAATCTCTAC+AGG | - | chr2.4:43251677-43251696 | MS.gene75244:intron | 45.0% | |
| GGAGTTGCTTATTCGCAACA+AGG | + | chr2.4:43250724-43250743 | None:intergenic | 45.0% | |
| GGATTTCAAGCTATGGCTTG+AGG | + | chr2.4:43249967-43249986 | None:intergenic | 45.0% | |
| GGGAAACTTGTCACAGCAAT+TGG | - | chr2.4:43253133-43253152 | MS.gene75244:intron | 45.0% | |
| GGTCTGATTACTAAACGGGT+AGG | + | chr2.4:43250148-43250167 | None:intergenic | 45.0% | |
| GGTTGAGTACAACAGAGTAC+TGG | + | chr2.4:43253256-43253275 | None:intergenic | 45.0% | |
| GTATGAGGTTGACCTCCAAT+CGG | - | chr2.4:43250070-43250089 | MS.gene75244:intron | 45.0% | |
| GTCTAATACTGGCGAAACAC+TGG | + | chr2.4:43252526-43252545 | None:intergenic | 45.0% | |
| GTTTATGACCCAAAGGGTAG+AGG | - | chr2.4:43251832-43251851 | MS.gene75244:intron | 45.0% | |
| TAAGTAAGCACCACCTTTGG+TGG | + | chr2.4:43252598-43252617 | None:intergenic | 45.0% | |
| TACTGTAGTATCTGCCCAAC+TGG | - | chr2.4:43251359-43251378 | MS.gene75244:intron | 45.0% | |
| TATCTTCTGCTCCGAAAGGT+CGG | - | chr2.4:43254110-43254129 | MS.gene75244:intron | 45.0% | |
| TCAAGACAACCTCTACCCTT+TGG | + | chr2.4:43251844-43251863 | None:intergenic | 45.0% | |
| TCAGTTTCTGACTACTCCAG+AGG | - | chr2.4:43250016-43250035 | MS.gene75244:intron | 45.0% | |
| TCTGCATGCACAAAGCAACA+TGG | + | chr2.4:43254246-43254265 | None:intergenic | 45.0% | |
| TGATTACTAAACGGGTAGGG+GGG | + | chr2.4:43250144-43250163 | None:intergenic | 45.0% | |
| TGCACACCATTCCTCAACTA+AGG | - | chr2.4:43250907-43250926 | MS.gene75244:intron | 45.0% | |
| TGTCTAGAGACTTTGTTGCC+TGG | + | chr2.4:43250413-43250432 | None:intergenic | 45.0% | |
| TTCCTCAACTAGAGAGAGAG+TGG | + | chr2.4:43249559-43249578 | None:intergenic | 45.0% | |
| TTTGTCCCGCATTTGTACCA+AGG | + | chr2.4:43248843-43248862 | None:intergenic | 45.0% | |
| ! | CAGTATCAGTCATCGATTGG+AGG | + | chr2.4:43250085-43250104 | None:intergenic | 45.0% |
| ! | CAGTATTAGTCACCGATTGG+AGG | + | chr2.4:43250461-43250480 | None:intergenic | 45.0% |
| ! | CATTGCCAGTAGGTGGTTTT+TGG | - | chr2.4:43250241-43250260 | MS.gene75244:intron | 45.0% |
| ! | CTGTGACAAGTTTCCCCTTT+TGG | + | chr2.4:43253129-43253148 | None:intergenic | 45.0% |
| ! | TAGTGGACAGGTCTTGGATA+TGG | + | chr2.4:43249037-43249056 | None:intergenic | 45.0% |
| ! | TTATGAGCATTGCCAGTAGG+TGG | - | chr2.4:43250234-43250253 | MS.gene75244:intron | 45.0% |
| ! | TTCTTTTCCTGCGGTACACA+AGG | + | chr2.4:43249355-43249374 | None:intergenic | 45.0% |
| !! | ACCTTGCTTTTGCTAGAAGC+TGG | + | chr2.4:43253203-43253222 | None:intergenic | 45.0% |
| !! | GGGGATTTTCTAGAAGTGGT+GGG | + | chr2.4:43250125-43250144 | None:intergenic | 45.0% |
| !! | TAGGGGGGATTTTCTAGAAG+TGG | + | chr2.4:43250129-43250148 | None:intergenic | 45.0% |
| !!! | CCAGTTGTGCTGATTGCTTT+TGG | + | chr2.4:43252322-43252341 | None:intergenic | 45.0% |
| !!! | ATATTATATTCATTATTTTA+AGG | + | chr2.4:43248564-43248583 | None:intergenic | 5.0% |
| ACCAGTGGCAAGGATGAACA+CGG | + | chr2.4:43251070-43251089 | None:intergenic | 50.0% | |
| CACCAATCAAGCACGAGAGA+TGG | - | chr2.4:43250856-43250875 | MS.gene75244:intron | 50.0% | |
| CACGCCAAAAAACCGCCTAT+TGG | + | chr2.4:43249870-43249889 | None:intergenic | 50.0% | |
| CGAAAGGTCGGATTGCTTCA+AGG | - | chr2.4:43254122-43254141 | MS.gene75244:intron | 50.0% | |
| GAGGTCCTTGGTACAAATGC+GGG | - | chr2.4:43248835-43248854 | MS.gene75244:intron | 50.0% | |
| GCACACCAAAAACCACCTAC+TGG | + | chr2.4:43250249-43250268 | None:intergenic | 50.0% | |
| GCATGCACAAAGCAACATGG+AGG | + | chr2.4:43254243-43254262 | None:intergenic | 50.0% | |
| GGAGGTCCTTGGTACAAATG+CGG | - | chr2.4:43248834-43248853 | MS.gene75244:intron | 50.0% | |
| GTCTTGGATATGGAGGTTCC+AGG | + | chr2.4:43249027-43249046 | None:intergenic | 50.0% | |
| TAGTAGAAGGTGAAGGGTGG+GGG | - | chr2.4:43248757-43248776 | MS.gene75244:intron | 50.0% | |
| TGGACAGGTCTTGGATATGG+AGG | + | chr2.4:43249034-43249053 | None:intergenic | 50.0% | |
| TGGAGTGGATATTGCATCCC+AGG | - | chr2.4:43253848-43253867 | MS.gene75244:intron | 50.0% | |
| TGTCCACTAGACCAAACCCT+TGG | - | chr2.4:43249048-43249067 | MS.gene75244:intron | 50.0% | |
| TTAACTGCCTTGTGTACCGC+AGG | - | chr2.4:43249345-43249364 | MS.gene75244:intron | 50.0% | |
| TTGAGGTGTGTCCGACACAT+TGG | - | chr2.4:43248622-43248641 | MS.gene75244:intron | 50.0% | |
| ! | AAGGGTTTGGTCTAGTGGAC+AGG | + | chr2.4:43249049-43249068 | None:intergenic | 50.0% |
| ! | ACTCCAAGGGTTTGGTCTAG+TGG | + | chr2.4:43249054-43249073 | None:intergenic | 50.0% |
| ! | AGTGGGTGTGGTTTTTGCAC+TGG | - | chr2.4:43252857-43252876 | MS.gene75244:intron | 50.0% |
| ! | TTGGTCTAGTGGACAGGTCT+TGG | + | chr2.4:43249043-43249062 | None:intergenic | 50.0% |
| !! | ACTGAAGACGATAGTGGGTG+TGG | - | chr2.4:43252845-43252864 | MS.gene75244:intron | 50.0% |
| !! | GAAGGGTGCCACTAAAGCAA+TGG | - | chr2.4:43251703-43251722 | MS.gene75244:intron | 50.0% |
| !! | GGGGGATTTTCTAGAAGTGG+TGG | + | chr2.4:43250126-43250145 | None:intergenic | 50.0% |
| ACCGTGTTCATCCTTGCCAC+TGG | - | chr2.4:43251066-43251085 | MS.gene75244:intron | 55.0% | |
| AGGGAAGTCGTGCACAGATC+AGG | - | chr2.4:43251545-43251564 | MS.gene75244:intron | 55.0% | |
| CCATGTGACTAGGAGGTCAC+AGG | - | chr2.4:43253163-43253182 | MS.gene75244:intron | 55.0% | |
| CCTGTGACCTCCTAGTCACA+TGG | + | chr2.4:43253166-43253185 | None:intergenic | 55.0% | |
| CTACCATGAGGCTATCAGGC+AGG | + | chr2.4:43253466-43253485 | None:intergenic | 55.0% | |
| GGAAGTCGTGCACAGATCAG+GGG | - | chr2.4:43251547-43251566 | MS.gene75244:intron | 55.0% | |
| GGGAAGTCGTGCACAGATCA+GGG | - | chr2.4:43251546-43251565 | MS.gene75244:intron | 55.0% | |
| GGGTGTAGCAACTCACACAC+AGG | - | chr2.4:43251567-43251586 | MS.gene75244:intron | 55.0% | |
| GGTTGCACCATGTGACTAGG+AGG | - | chr2.4:43253156-43253175 | MS.gene75244:intron | 55.0% | |
| TGGGGTTGCACCATGTGACT+AGG | - | chr2.4:43253153-43253172 | MS.gene75244:intron | 55.0% | |
| TGTTGTACTCAACCACGGCG+AGG | - | chr2.4:43253355-43253374 | MS.gene75244:intron | 55.0% | |
| !! | GGGTGCCACTAAAGCAATGG+TGG | - | chr2.4:43251706-43251725 | MS.gene75244:intron | 55.0% |
| ACCTAACTAGCTGCCGAGCC+AGG | + | chr2.4:43251501-43251520 | None:intergenic | 60.0% | |
| AGAAGGTGAAGGGTGGGGGT+TGG | - | chr2.4:43248761-43248780 | MS.gene75244:intron | 60.0% | |
| ATAAAGCTCTCGCCTCGCCG+TGG | + | chr2.4:43253370-43253389 | None:intergenic | 60.0% | |
| GAAGGTGAAGGGTGGGGGTT+GGG | - | chr2.4:43248762-43248781 | MS.gene75244:intron | 60.0% | |
| GTGCCTGCCTGATAGCCTCA+TGG | - | chr2.4:43253460-43253479 | MS.gene75244:intron | 60.0% | |
| TGAAGGGTGGGGGTTGGGTT+GGG | - | chr2.4:43248767-43248786 | MS.gene75244:intron | 60.0% | |
| !! | GCAAATGGCACCGGCAAAGC+AGG | - | chr2.4:43252277-43252296 | MS.gene75244:intron | 60.0% |
| !! | TCCTGGCTCGGCAGCTAGTT+AGG | - | chr2.4:43251497-43251516 | MS.gene75244:intron | 60.0% |
| GTGAAGGGTGGGGGTTGGGT+TGG | - | chr2.4:43248766-43248785 | MS.gene75244:intron | 65.0% | |
| !! | CCTCCCTCCAAGGGCACTAG+CGG | - | chr2.4:43248993-43249012 | MS.gene75244:CDS | 65.0% |
| !! | CTCCCTCCAAGGGCACTAGC+GGG | - | chr2.4:43248994-43249013 | MS.gene75244:CDS | 65.0% |
| !! | TCCCTCCAAGGGCACTAGCG+GGG | - | chr2.4:43248995-43249014 | MS.gene75244:CDS | 65.0% |
| AGCCCCGCTAGTGCCCTTGG+AGG | + | chr2.4:43249000-43249019 | None:intergenic | 70.0% | |
| CCGCTAGTGCCCTTGGAGGG+AGG | + | chr2.4:43248996-43249015 | None:intergenic | 70.0% | |
| GCACTAGCGGGGCTCGAACC+TGG | - | chr2.4:43249006-43249025 | MS.gene75244:intron | 70.0% | |
| GCCCCGCTAGTGCCCTTGGA+GGG | + | chr2.4:43248999-43249018 | None:intergenic | 70.0% | |
| TCGAGCCCCGCTAGTGCCCT+TGG | + | chr2.4:43249003-43249022 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 43248343 | 43254325 | 43248343 | ID=MS.gene75244 |
| chr2.4 | mRNA | 43248343 | 43254325 | 43248343 | ID=MS.gene75244.t1;Parent=MS.gene75244 |
| chr2.4 | exon | 43254307 | 43254325 | 43254307 | ID=MS.gene75244.t1.exon1;Parent=MS.gene75244.t1 |
| chr2.4 | CDS | 43254307 | 43254325 | 43254307 | ID=cds.MS.gene75244.t1;Parent=MS.gene75244.t1 |
| chr2.4 | exon | 43253389 | 43253423 | 43253389 | ID=MS.gene75244.t1.exon2;Parent=MS.gene75244.t1 |
| chr2.4 | CDS | 43253389 | 43253423 | 43253389 | ID=cds.MS.gene75244.t1;Parent=MS.gene75244.t1 |
| chr2.4 | exon | 43253251 | 43253301 | 43253251 | ID=MS.gene75244.t1.exon3;Parent=MS.gene75244.t1 |
| chr2.4 | CDS | 43253251 | 43253301 | 43253251 | ID=cds.MS.gene75244.t1;Parent=MS.gene75244.t1 |
| chr2.4 | exon | 43251080 | 43251184 | 43251080 | ID=MS.gene75244.t1.exon4;Parent=MS.gene75244.t1 |
| chr2.4 | CDS | 43251080 | 43251184 | 43251080 | ID=cds.MS.gene75244.t1;Parent=MS.gene75244.t1 |
| chr2.4 | exon | 43250929 | 43251000 | 43250929 | ID=MS.gene75244.t1.exon5;Parent=MS.gene75244.t1 |
| chr2.4 | CDS | 43250929 | 43251000 | 43250929 | ID=cds.MS.gene75244.t1;Parent=MS.gene75244.t1 |
| chr2.4 | exon | 43250319 | 43250390 | 43250319 | ID=MS.gene75244.t1.exon6;Parent=MS.gene75244.t1 |
| chr2.4 | CDS | 43250319 | 43250390 | 43250319 | ID=cds.MS.gene75244.t1;Parent=MS.gene75244.t1 |
| chr2.4 | exon | 43248935 | 43249015 | 43248935 | ID=MS.gene75244.t1.exon7;Parent=MS.gene75244.t1 |
| chr2.4 | CDS | 43248935 | 43249015 | 43248935 | ID=cds.MS.gene75244.t1;Parent=MS.gene75244.t1 |
| chr2.4 | exon | 43248799 | 43248834 | 43248799 | ID=MS.gene75244.t1.exon8;Parent=MS.gene75244.t1 |
| chr2.4 | CDS | 43248799 | 43248834 | 43248799 | ID=cds.MS.gene75244.t1;Parent=MS.gene75244.t1 |
| chr2.4 | exon | 43248501 | 43248559 | 43248501 | ID=MS.gene75244.t1.exon9;Parent=MS.gene75244.t1 |
| chr2.4 | CDS | 43248501 | 43248559 | 43248501 | ID=cds.MS.gene75244.t1;Parent=MS.gene75244.t1 |
| chr2.4 | exon | 43248343 | 43248403 | 43248343 | ID=MS.gene75244.t1.exon10;Parent=MS.gene75244.t1 |
| chr2.4 | CDS | 43248343 | 43248403 | 43248343 | ID=cds.MS.gene75244.t1;Parent=MS.gene75244.t1 |
| Gene Sequence |
| Protein sequence |
