Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98009.t1 | XP_013463763.1 | 100 | 205 | 0 | 0 | 3 | 207 | 12 | 216 | 1.70E-67 | 265.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98009.t1 | Q0WTY4 | 80.1 | 211 | 36 | 1 | 3 | 207 | 12 | 222 | 1.7e-55 | 217.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98009.t1 | B7FHD8 | 100.0 | 205 | 0 | 0 | 3 | 207 | 12 | 216 | 1.2e-67 | 265.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053536 | MS.gene98009 | 0.844212 | 8.70E-59 | -1.69E-46 |
| MS.gene053538 | MS.gene98009 | 0.854484 | 1.19E-61 | -1.69E-46 |
| MS.gene055764 | MS.gene98009 | 0.810648 | 1.04E-50 | -1.69E-46 |
| MS.gene059424 | MS.gene98009 | 0.837843 | 4.09E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene98009 | MS.gene09111 | PPI |
| MS.gene96973 | MS.gene98009 | PPI |
| MS.gene98009 | MS.gene049786 | PPI |
| MS.gene018678 | MS.gene98009 | PPI |
| MS.gene98009 | MS.gene007726 | PPI |
| MS.gene020387 | MS.gene98009 | PPI |
| MS.gene051184 | MS.gene98009 | PPI |
| MS.gene09166 | MS.gene98009 | PPI |
| MS.gene98009 | MS.gene025196 | PPI |
| MS.gene23464 | MS.gene98009 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98009.t1 | MTR_2g047875 | 100.000 | 205 | 0 | 0 | 3 | 207 | 12 | 216 | 1.26e-145 | 404 |
| MS.gene98009.t1 | MTR_1g069715 | 73.892 | 203 | 49 | 1 | 3 | 205 | 477 | 675 | 2.65e-103 | 312 |
| MS.gene98009.t1 | MTR_7g097170 | 77.340 | 203 | 42 | 1 | 3 | 205 | 12 | 210 | 3.66e-98 | 284 |
| MS.gene98009.t1 | MTR_2g041190 | 40.284 | 211 | 120 | 1 | 3 | 207 | 13 | 223 | 2.92e-37 | 129 |
| MS.gene98009.t1 | MTR_8g019700 | 44.311 | 167 | 93 | 0 | 3 | 169 | 13 | 179 | 1.76e-35 | 125 |
| MS.gene98009.t1 | MTR_4g057565 | 28.708 | 209 | 141 | 1 | 5 | 205 | 18 | 226 | 1.53e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98009.t1 | AT5G44560 | 82.938 | 211 | 30 | 1 | 3 | 207 | 12 | 222 | 2.23e-120 | 340 |
| MS.gene98009.t1 | AT5G44560 | 83.168 | 202 | 28 | 1 | 12 | 207 | 1 | 202 | 1.42e-115 | 327 |
| MS.gene98009.t1 | AT5G44560 | 88.024 | 167 | 20 | 0 | 3 | 169 | 12 | 178 | 1.55e-104 | 299 |
| MS.gene98009.t1 | AT1G03950 | 72.414 | 203 | 52 | 1 | 3 | 205 | 12 | 210 | 5.34e-104 | 298 |
| MS.gene98009.t1 | AT5G44560 | 82.734 | 139 | 24 | 0 | 3 | 141 | 12 | 150 | 5.99e-79 | 233 |
| MS.gene98009.t1 | AT2G06530 | 40.566 | 212 | 119 | 1 | 3 | 207 | 14 | 225 | 9.61e-40 | 135 |
| MS.gene98009.t1 | AT2G06530 | 40.500 | 200 | 112 | 1 | 15 | 207 | 5 | 204 | 7.54e-37 | 127 |
| MS.gene98009.t1 | AT5G22950 | 31.280 | 211 | 135 | 3 | 5 | 205 | 18 | 228 | 3.06e-11 | 60.8 |
Find 43 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACAGGTTCTTGATGAAAT+TGG | 0.228952 | 2.3:+43167078 | MS.gene98009:intron |
| AAGCTCTGCGACAAAGTAAA+AGG | 0.259028 | 2.3:+43161670 | MS.gene98009:CDS |
| CATTGCCACCATTGCTTTAG+TGG | 0.261194 | 2.3:-43165081 | None:intergenic |
| CCAGTTGTGCTGATTGCTTT+TGG | 0.285128 | 2.3:-43165570 | None:intergenic |
| ATCACTTTAGCCTGCTTTGC+CGG | 0.327935 | 2.3:-43165538 | None:intergenic |
| AGCAATGGTGGCAATGAATA+AGG | 0.349876 | 2.3:+43165088 | MS.gene98009:CDS |
| AGGGAAGTCGTGCACAGATC+AGG | 0.381377 | 2.3:+43164915 | MS.gene98009:CDS |
| CTTGAAGCAATCCGACCTTT+CGG | 0.382816 | 2.3:-43167371 | None:intergenic |
| TGAAGAACTTGAAAAGAGAT+TGG | 0.400428 | 2.3:+43167533 | MS.gene98009:CDS |
| TCCTGGCTCGGCAGCTAGTT+AGG | 0.403556 | 2.3:+43164867 | MS.gene98009:CDS |
| CCAAAAGCAATCAGCACAAC+TGG | 0.415296 | 2.3:+43165570 | MS.gene98009:CDS |
| GCAAGCACTTCAATCTCTAC+AGG | 0.426499 | 2.3:+43165047 | MS.gene98009:CDS |
| CGAAAGGTCGGATTGCTTCA+AGG | 0.442942 | 2.3:+43167372 | MS.gene98009:CDS |
| TTCAATCTCTACAGGGATGA+AGG | 0.458265 | 2.3:+43165055 | MS.gene98009:CDS |
| TGGAGTGGATATTGCATCCC+AGG | 0.474380 | 2.3:+43167098 | MS.gene98009:CDS |
| ACCTAACTAGCTGCCGAGCC+AGG | 0.485867 | 2.3:-43164868 | None:intergenic |
| GCAAATGGCACCGGCAAAGC+AGG | 0.491669 | 2.3:+43165528 | MS.gene98009:intron |
| CCTGCAGATTAGTTATCTGT+TGG | 0.504006 | 2.3:-43164895 | None:intergenic |
| CCAACAGATAACTAATCTGC+AGG | 0.509427 | 2.3:+43164895 | MS.gene98009:CDS |
| GGGAAGTCGTGCACAGATCA+GGG | 0.524632 | 2.3:+43164916 | MS.gene98009:CDS |
| AGAGATAGCATCACTTCAGA+TGG | 0.527919 | 2.3:+43162625 | MS.gene98009:CDS |
| ACAGGCTTCTACTAAAATCC+TGG | 0.535270 | 2.3:+43164850 | MS.gene98009:intron |
| ATCTTCTCAGCAAATGGCAC+CGG | 0.537436 | 2.3:+43165519 | MS.gene98009:intron |
| AGCTCTGCGACAAAGTAAAA+GGG | 0.543063 | 2.3:+43161671 | MS.gene98009:CDS |
| AGTTGCAGAGATTAAAAGAG+AGG | 0.544597 | 2.3:+43162748 | MS.gene98009:CDS |
| TCAATCTCTACAGGGATGAA+GGG | 0.583879 | 2.3:+43165056 | MS.gene98009:CDS |
| TATCTTCTGCTCCGAAAGGT+CGG | 0.586806 | 2.3:+43167360 | MS.gene98009:CDS |
| ACAAAGTAAAAGGGAAATGT+CGG | 0.587450 | 2.3:+43161680 | MS.gene98009:CDS |
| CTTCTACTAAAATCCTGGCT+CGG | 0.598970 | 2.3:+43164855 | MS.gene98009:CDS |
| GGTTCTTGATGAAATTGGAG+TGG | 0.601589 | 2.3:+43167083 | MS.gene98009:intron |
| ATGCTGAAAATGCTGCTCCA+AGG | 0.612137 | 2.3:+43167396 | MS.gene98009:CDS |
| CAAGCACTTCAATCTCTACA+GGG | 0.614124 | 2.3:+43165048 | MS.gene98009:CDS |
| GATAGCATCACTTCAGATGG+AGG | 0.618277 | 2.3:+43162628 | MS.gene98009:CDS |
| ATCAGCACAACTGGACATGA+CGG | 0.620669 | 2.3:+43165579 | MS.gene98009:CDS |
| GGGTGCCACTAAAGCAATGG+TGG | 0.624027 | 2.3:+43165076 | MS.gene98009:CDS |
| GAAGGGTGCCACTAAAGCAA+TGG | 0.625367 | 2.3:+43165073 | MS.gene98009:CDS |
| ATCAGAAGAACTCACTAACC+AGG | 0.628471 | 2.3:+43166962 | MS.gene98009:CDS |
| TAGTTATCTTCTGCTCCGAA+AGG | 0.634306 | 2.3:+43167356 | MS.gene98009:intron |
| TTTAGACAAAGATGAAGCTG+AGG | 0.636787 | 2.3:+43166935 | MS.gene98009:CDS |
| GAAATGTCGGTTGCAACTAG+AGG | 0.647247 | 2.3:+43161693 | MS.gene98009:CDS |
| GGAAGTCGTGCACAGATCAG+GGG | 0.664483 | 2.3:+43164917 | MS.gene98009:CDS |
| GGGTGTAGCAACTCACACAC+AGG | 0.671175 | 2.3:+43164937 | MS.gene98009:CDS |
| CAACAGATAACTAATCTGCA+GGG | 0.676896 | 2.3:+43164896 | MS.gene98009:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTCATATATAAAATCAAA+TGG | - | chr2.3:43161821-43161840 | None:intergenic | 10.0% |
| !!! | AACTTTTATGAAAATTTTTA+CGG | + | chr2.3:43165799-43165818 | MS.gene98009:intron | 10.0% |
| !!! | TAATTACTTTTATGAATATT+GGG | + | chr2.3:43167306-43167325 | MS.gene98009:intron | 10.0% |
| !!! | TTAATTACTTTTATGAATAT+TGG | + | chr2.3:43167305-43167324 | MS.gene98009:intron | 10.0% |
| !!! | TTTTATTTAGATGTATATTT+GGG | + | chr2.3:43162825-43162844 | MS.gene98009:intron | 10.0% |
| !!! | TTTTTATTTAGATGTATATT+TGG | + | chr2.3:43162824-43162843 | MS.gene98009:intron | 10.0% |
| !! | ATATATATAATCTAATGCTA+TGG | - | chr2.3:43166758-43166777 | None:intergenic | 15.0% |
| !! | ATGATAAATATTTGTATGTT+TGG | - | chr2.3:43163032-43163051 | None:intergenic | 15.0% |
| !! | CATTAAAAAAAAACAGTTAA+AGG | + | chr2.3:43162273-43162292 | MS.gene98009:intron | 15.0% |
| !! | TAAATAAATAGATTTCTAAC+TGG | - | chr2.3:43164556-43164575 | None:intergenic | 15.0% |
| !!! | CAATTATTAGTCTTTTTTTT+TGG | + | chr2.3:43165737-43165756 | MS.gene98009:intron | 15.0% |
| !!! | CATTATTTTAAGGTATTATA+AGG | - | chr2.3:43161905-43161924 | None:intergenic | 15.0% |
| !!! | CTTTAACTGTTTTTTTTTAA+TGG | - | chr2.3:43162275-43162294 | None:intergenic | 15.0% |
| !! | AAAAATTGAATTTCAAGCTA+TGG | - | chr2.3:43163722-43163741 | None:intergenic | 20.0% |
| !! | AAATATTTGTATGTTTGGAT+TGG | - | chr2.3:43163027-43163046 | None:intergenic | 20.0% |
| !! | AATAAGATTGAAATATACCT+TGG | - | chr2.3:43167416-43167435 | None:intergenic | 20.0% |
| !! | AATAATGAAATTGAAGAGTA+TGG | + | chr2.3:43165986-43166005 | MS.gene98009:intron | 20.0% |
| !! | ACTATAGTTAAAGATTGTAT+TGG | - | chr2.3:43163302-43163321 | None:intergenic | 20.0% |
| !! | ATAAACTAGGAGTTAAATAA+AGG | + | chr2.3:43165930-43165949 | MS.gene98009:intron | 20.0% |
| !! | ATTTAGAGGAGAATTATATA+GGG | - | chr2.3:43164323-43164342 | None:intergenic | 20.0% |
| !! | GACTAACATAATGAAATATT+GGG | - | chr2.3:43167135-43167154 | None:intergenic | 20.0% |
| !! | GATCGTTTAAATACAAAAAT+TGG | - | chr2.3:43163358-43163377 | None:intergenic | 20.0% |
| !! | GTAAGAACTAAAATAAGTAA+GGG | + | chr2.3:43166306-43166325 | MS.gene98009:intron | 20.0% |
| !! | GTATATTTCAATCTTATTCA+TGG | + | chr2.3:43167418-43167437 | MS.gene98009:intron | 20.0% |
| !! | TCATTATCAATATTCATGAA+TGG | - | chr2.3:43163957-43163976 | None:intergenic | 20.0% |
| !! | TGACTAACATAATGAAATAT+TGG | - | chr2.3:43167136-43167155 | None:intergenic | 20.0% |
| !! | TGTAAGAACTAAAATAAGTA+AGG | + | chr2.3:43166305-43166324 | MS.gene98009:intron | 20.0% |
| !! | TTAAGTTACTCTTAACATAT+GGG | - | chr2.3:43165281-43165300 | None:intergenic | 20.0% |
| !! | TTCATAGCTTATAATTCATT+GGG | + | chr2.3:43162060-43162079 | MS.gene98009:intron | 20.0% |
| !!! | AATGAATAAGGTATATTTTC+TGG | + | chr2.3:43165100-43165119 | MS.gene98009:intron | 20.0% |
| !!! | AATTTCCAAATTTCTTTTGT+AGG | + | chr2.3:43165016-43165035 | MS.gene98009:intron | 20.0% |
| !!! | ATAATGAAATTGAAGAGTAT+GGG | + | chr2.3:43165987-43166006 | MS.gene98009:intron | 20.0% |
| !!! | ATGAATAAGGTATATTTTCT+GGG | + | chr2.3:43165101-43165120 | MS.gene98009:intron | 20.0% |
| !!! | ATTTTTTTACCTTTCTAACT+AGG | + | chr2.3:43161870-43161889 | MS.gene98009:intron | 20.0% |
| !!! | CGGATAACATTATAAAATTT+TGG | - | chr2.3:43166790-43166809 | None:intergenic | 20.0% |
| !!! | TAATGATTTCTTTTTGCAAA+AGG | - | chr2.3:43164513-43164532 | None:intergenic | 20.0% |
| !!! | TAATTTTTTCCTAGTTAGAA+AGG | - | chr2.3:43161882-43161901 | None:intergenic | 20.0% |
| !!! | TACATTGTTGTCTTTATTTT+TGG | + | chr2.3:43164617-43164636 | MS.gene98009:intron | 20.0% |
| ! | AAAAATTGGATTTCAAGCTA+TGG | - | chr2.3:43163344-43163363 | None:intergenic | 25.0% |
| ! | AAGAGTAACTTAACTTTCAT+AGG | + | chr2.3:43165288-43165307 | MS.gene98009:intron | 25.0% |
| ! | ACAACACTTCATCAAATAAA+AGG | - | chr2.3:43163168-43163187 | None:intergenic | 25.0% |
| ! | ACATACTTTAAACTACCAAA+AGG | + | chr2.3:43166361-43166380 | MS.gene98009:intron | 25.0% |
| ! | AGACTAATAATTGTTCATTG+TGG | - | chr2.3:43165730-43165749 | None:intergenic | 25.0% |
| ! | ATAAAGGTCTGATTACTAAA+CGG | - | chr2.3:43163143-43163162 | None:intergenic | 25.0% |
| ! | ATAACTTCTTTCTTTCTTGT+AGG | + | chr2.3:43162593-43162612 | MS.gene98009:intron | 25.0% |
| ! | ATACTTTAAACTACCAAAAG+GGG | + | chr2.3:43166363-43166382 | MS.gene98009:intron | 25.0% |
| ! | ATCAATTGCTAGAATAGAAA+AGG | + | chr2.3:43161840-43161859 | MS.gene98009:intron | 25.0% |
| ! | ATTACATATGTCAATTAGCT+TGG | + | chr2.3:43166660-43166679 | MS.gene98009:intron | 25.0% |
| ! | CAAAAAGAAATCATTATGCT+AGG | + | chr2.3:43164517-43164536 | MS.gene98009:intron | 25.0% |
| ! | CAGAAAATATTGATGAAACT+TGG | + | chr2.3:43166831-43166850 | MS.gene98009:intron | 25.0% |
| ! | CATACTTTAAACTACCAAAA+GGG | + | chr2.3:43166362-43166381 | MS.gene98009:intron | 25.0% |
| ! | CATCAAATAAAAGGTGATAA+AGG | - | chr2.3:43163159-43163178 | None:intergenic | 25.0% |
| ! | CTTCATAGCTTATAATTCAT+TGG | + | chr2.3:43162059-43162078 | MS.gene98009:intron | 25.0% |
| ! | GAGAAATAAGAAAGAACAAA+AGG | - | chr2.3:43162508-43162527 | None:intergenic | 25.0% |
| ! | GATTTAGAGGAGAATTATAT+AGG | - | chr2.3:43164324-43164343 | None:intergenic | 25.0% |
| ! | GTGCTTACTTAATAGAAATT+TGG | + | chr2.3:43165854-43165873 | MS.gene98009:intron | 25.0% |
| ! | GTTAAGTTACTCTTAACATA+TGG | - | chr2.3:43165282-43165301 | None:intergenic | 25.0% |
| ! | TAAATAGATTTCTAACTGGA+CGG | - | chr2.3:43164552-43164571 | None:intergenic | 25.0% |
| ! | TAATGCCTACAAAAGAAATT+TGG | - | chr2.3:43165024-43165043 | None:intergenic | 25.0% |
| ! | TCATAGCTTATAATTCATTG+GGG | + | chr2.3:43162061-43162080 | MS.gene98009:intron | 25.0% |
| ! | TCTTAAGGACACAATAAATT+GGG | - | chr2.3:43164035-43164054 | None:intergenic | 25.0% |
| ! | TTCTTAAGGACACAATAAAT+TGG | - | chr2.3:43164036-43164055 | None:intergenic | 25.0% |
| ! | TTTCGGATAACATAAATTGT+TGG | - | chr2.3:43166878-43166897 | None:intergenic | 25.0% |
| ! | TTTGTATTGAAGTGTAAACA+TGG | - | chr2.3:43165352-43165371 | None:intergenic | 25.0% |
| !! | AAAATTCTTCTTTCTTTTCG+AGG | + | chr2.3:43164969-43164988 | MS.gene98009:intron | 25.0% |
| !! | AAATTCTTCTTTCTTTTCGA+GGG | + | chr2.3:43164970-43164989 | MS.gene98009:intron | 25.0% |
| !! | ACATGTTCTTGATTTTCTTA+AGG | - | chr2.3:43164050-43164069 | None:intergenic | 25.0% |
| !! | ATATTCAAAGCATTTCTTCA+TGG | - | chr2.3:43164348-43164367 | None:intergenic | 25.0% |
| !! | CTTTCCATTGTTCAAAATTT+TGG | + | chr2.3:43165133-43165152 | MS.gene98009:intron | 25.0% |
| !! | GATTTTCATTTATTCATGAC+AGG | + | chr2.3:43167062-43167081 | MS.gene98009:intron | 25.0% |
| !! | GGATGTTTATGATTGTTATT+AGG | - | chr2.3:43164492-43164511 | None:intergenic | 25.0% |
| !! | GTTTCTTTTTACAACTAGTT+TGG | + | chr2.3:43164466-43164485 | MS.gene98009:intron | 25.0% |
| !! | TAATGAAATTGAAGAGTATG+GGG | + | chr2.3:43165988-43166007 | MS.gene98009:intron | 25.0% |
| !! | TAGTCCAAAATTTTGAACAA+TGG | - | chr2.3:43165140-43165159 | None:intergenic | 25.0% |
| !! | TATAAGCTATGAAGCATTTA+CGG | - | chr2.3:43162053-43162072 | None:intergenic | 25.0% |
| !! | TGATTTGAGTTAATGGTTAA+AGG | + | chr2.3:43162177-43162196 | MS.gene98009:intron | 25.0% |
| !!! | ACAAATACTTTTGAAGATTG+TGG | + | chr2.3:43166202-43166221 | MS.gene98009:intron | 25.0% |
| !!! | ATTCTGTTTTTCTCTTCTTA+TGG | + | chr2.3:43167333-43167352 | MS.gene98009:intron | 25.0% |
| !!! | ATTGGGGTTTTTTTAATGTT+TGG | + | chr2.3:43162077-43162096 | MS.gene98009:intron | 25.0% |
| !!! | CAAATACTTTTGAAGATTGT+GGG | + | chr2.3:43166203-43166222 | MS.gene98009:intron | 25.0% |
| !!! | GCTTTTAGTATTTTTTGAGA+GGG | + | chr2.3:43165665-43165684 | MS.gene98009:intron | 25.0% |
| !!! | GTTTTTTTAATGTTTGGAGT+TGG | + | chr2.3:43162083-43162102 | MS.gene98009:intron | 25.0% |
| !!! | TGCTTTTAGTATTTTTTGAG+AGG | + | chr2.3:43165664-43165683 | MS.gene98009:intron | 25.0% |
| !!! | TGTCTTTATTTTTGGTTGAA+TGG | + | chr2.3:43164625-43164644 | MS.gene98009:intron | 25.0% |
| !!! | TTTATTTTTGGTTGAATGGA+GGG | + | chr2.3:43164629-43164648 | MS.gene98009:intron | 25.0% |
| AAAAGAAACATTTACACCAG+TGG | - | chr2.3:43164455-43164474 | None:intergenic | 30.0% | |
| AAAGAAATCATTATGCTAGG+CGG | + | chr2.3:43164520-43164539 | MS.gene98009:intron | 30.0% | |
| AAAGCAGTTTCAAGATCTTA+TGG | - | chr2.3:43163066-43163085 | None:intergenic | 30.0% | |
| AAAGCTAAAATGCTTGTAGT+TGG | - | chr2.3:43164115-43164134 | None:intergenic | 30.0% | |
| AAGAGAGAAAAAAACACAGA+AGG | + | chr2.3:43166157-43166176 | MS.gene98009:intron | 30.0% | |
| AATCAAGAACATGTTTGCTT+TGG | + | chr2.3:43164056-43164075 | MS.gene98009:intron | 30.0% | |
| AATTACAAGCAAGAAAGAGT+AGG | + | chr2.3:43164407-43164426 | MS.gene98009:intron | 30.0% | |
| AATTTAATAGTGCTTCCAGT+TGG | - | chr2.3:43164747-43164766 | None:intergenic | 30.0% | |
| ACAAAGTAAAAGGGAAATGT+CGG | + | chr2.3:43161680-43161699 | MS.gene98009:CDS | 30.0% | |
| ACTATAGTTGAAGGTTGTAT+TGG | - | chr2.3:43163680-43163699 | None:intergenic | 30.0% | |
| ACTTTAGATTCAATGCAAAC+AGG | - | chr2.3:43165405-43165424 | None:intergenic | 30.0% | |
| AGAAGTTTCGTATTTAGTTG+AGG | + | chr2.3:43163272-43163291 | MS.gene98009:intron | 30.0% | |
| ATATAATCTAATGCTATGGC+TGG | - | chr2.3:43166754-43166773 | None:intergenic | 30.0% | |
| ATCAAATAGTAGAAGGTGAA+GGG | + | chr2.3:43162121-43162140 | MS.gene98009:intron | 30.0% | |
| ATCAAGAACATGTTTGCTTT+GGG | + | chr2.3:43164057-43164076 | MS.gene98009:intron | 30.0% | |
| ATGAAAATCAGATATGACAG+AGG | - | chr2.3:43167051-43167070 | None:intergenic | 30.0% | |
| ATGTCAGTAACTATAGTTGA+AGG | - | chr2.3:43163689-43163708 | None:intergenic | 30.0% | |
| ATTAAAAGAGAGGCAAAAAC+TGG | + | chr2.3:43162758-43162777 | MS.gene98009:CDS | 30.0% | |
| ATTGTATGAAGAAAACTCCA+AGG | - | chr2.3:43162438-43162457 | None:intergenic | 30.0% | |
| ATTTAATAGTGCTTCCAGTT+GGG | - | chr2.3:43164746-43164765 | None:intergenic | 30.0% | |
| ATTTCTTCATGGAGATTTAG+AGG | - | chr2.3:43164337-43164356 | None:intergenic | 30.0% | |
| CATCAAACAAAAGGTGATAA+AGG | - | chr2.3:43163539-43163558 | None:intergenic | 30.0% | |
| CCAGATAAAGAACTAATTGA+AGG | + | chr2.3:43165900-43165919 | MS.gene98009:intron | 30.0% | |
| GAATAAGTGTATGTTTGATC+TGG | + | chr2.3:43162946-43162965 | MS.gene98009:intron | 30.0% | |
| GAGTTAATGGTTAAAGGATT+TGG | + | chr2.3:43162183-43162202 | MS.gene98009:intron | 30.0% | |
| GTCATTTATGTATATGTACC+TGG | - | chr2.3:43166983-43167002 | None:intergenic | 30.0% | |
| TAAAGGTCTGATTACTAAAC+GGG | - | chr2.3:43163522-43163541 | None:intergenic | 30.0% | |
| TAGCACATTAAGTCAAGAAT+GGG | - | chr2.3:43163904-43163923 | None:intergenic | 30.0% | |
| TATGAGTTAGCAAAGCTTTA+TGG | + | chr2.3:43162316-43162335 | MS.gene98009:intron | 30.0% | |
| TATTGAAGTGTAAACATGGA+TGG | - | chr2.3:43165348-43165367 | None:intergenic | 30.0% | |
| TGAAGAACTTGAAAAGAGAT+TGG | + | chr2.3:43167533-43167552 | MS.gene98009:CDS | 30.0% | |
| TGAAGGAACAACAATAAACT+AGG | + | chr2.3:43165917-43165936 | MS.gene98009:intron | 30.0% | |
| TTAATGGTTAAAGGATTTGG+AGG | + | chr2.3:43162186-43162205 | MS.gene98009:intron | 30.0% | |
| TTACTAAATGTGTGTTCCTT+TGG | - | chr2.3:43163131-43163150 | None:intergenic | 30.0% | |
| TTAGCACATTAAGTCAAGAA+TGG | - | chr2.3:43163905-43163924 | None:intergenic | 30.0% | |
| TTGTATGAAGAAAACTCCAA+GGG | - | chr2.3:43162437-43162456 | None:intergenic | 30.0% | |
| TTTGTGTCAAAGTCAATTGT+TGG | + | chr2.3:43164144-43164163 | MS.gene98009:intron | 30.0% | |
| ! | AACAATTGACTTTGACACAA+AGG | - | chr2.3:43164145-43164164 | None:intergenic | 30.0% |
| ! | CCTTCAATTAGTTCTTTATC+TGG | - | chr2.3:43165903-43165922 | None:intergenic | 30.0% |
| ! | TAATGTGTTAGATGCTTTTC+TGG | + | chr2.3:43165428-43165447 | MS.gene98009:intron | 30.0% |
| ! | TATTTGTATGTTTGGATTGG+CGG | - | chr2.3:43163024-43163043 | None:intergenic | 30.0% |
| ! | TTAGTTCTTACACTTACGTT+TGG | - | chr2.3:43166297-43166316 | None:intergenic | 30.0% |
| ! | TTGCTAAATAATGAAGTGTC+TGG | + | chr2.3:43164825-43164844 | MS.gene98009:intron | 30.0% |
| !!! | CTTTATTTTTGGTTGAATGG+AGG | + | chr2.3:43164628-43164647 | MS.gene98009:intron | 30.0% |
| !!! | TTTAGTATTTTTTGAGAGGG+AGG | + | chr2.3:43165668-43165687 | MS.gene98009:intron | 30.0% |
| ACAATCAGTTTATGACCCAA+AGG | + | chr2.3:43165195-43165214 | MS.gene98009:intron | 35.0% | |
| ACATTACAACTGCAACAGTT+GGG | - | chr2.3:43164699-43164718 | None:intergenic | 35.0% | |
| ACGACACTTCATCAAACAAA+AGG | - | chr2.3:43163548-43163567 | None:intergenic | 35.0% | |
| ACTATACTGAAGACGATAGT+GGG | + | chr2.3:43166090-43166109 | MS.gene98009:intron | 35.0% | |
| AGTTGCAGAGATTAAAAGAG+AGG | + | chr2.3:43162748-43162767 | MS.gene98009:CDS | 35.0% | |
| AGTTGCGATCAAATAGTAGA+AGG | + | chr2.3:43162114-43162133 | MS.gene98009:intron | 35.0% | |
| ATTAAGTAAGCACCACCTTT+GGG | - | chr2.3:43165847-43165866 | None:intergenic | 35.0% | |
| ATTAAGTCAAGAATGGGTAG+AGG | - | chr2.3:43163898-43163917 | None:intergenic | 35.0% | |
| CAACAGATAACTAATCTGCA+GGG | + | chr2.3:43164896-43164915 | MS.gene98009:CDS | 35.0% | |
| CAATCAGTTTATGACCCAAA+GGG | + | chr2.3:43165196-43165215 | MS.gene98009:intron | 35.0% | |
| CATCATCTCAATCTGCATTT+CGG | - | chr2.3:43166895-43166914 | None:intergenic | 35.0% | |
| CCAAATTATTACCGTGTTGA+CGG | + | chr2.3:43162019-43162038 | MS.gene98009:intron | 35.0% | |
| CGAATAGTTAGTTCATAGCA+TGG | + | chr2.3:43167203-43167222 | MS.gene98009:intron | 35.0% | |
| CTTGAATGTAACCAATGTGT+CGG | - | chr2.3:43161987-43162006 | None:intergenic | 35.0% | |
| GACATTGATAGAAGTTAGCA+AGG | + | chr2.3:43162542-43162561 | MS.gene98009:intron | 35.0% | |
| GATCAAATAGTAGAAGGTGA+AGG | + | chr2.3:43162120-43162139 | MS.gene98009:intron | 35.0% | |
| TACATTACAACTGCAACAGT+TGG | - | chr2.3:43164700-43164719 | None:intergenic | 35.0% | |
| TAGTTGAAGGTTGTATTGGA+TGG | - | chr2.3:43163676-43163695 | None:intergenic | 35.0% | |
| TATTAAGTAAGCACCACCTT+TGG | - | chr2.3:43165848-43165867 | None:intergenic | 35.0% | |
| TCAGAATATTGCTATGACGT+GGG | + | chr2.3:43166329-43166348 | MS.gene98009:intron | 35.0% | |
| TCATGCATTCCAAATCAGTT+CGG | - | chr2.3:43164789-43164808 | None:intergenic | 35.0% | |
| TCCTTTATTGCTTGTACTCT+TGG | + | chr2.3:43163931-43163950 | MS.gene98009:intron | 35.0% | |
| TGACAGGTTCTTGATGAAAT+TGG | + | chr2.3:43167078-43167097 | MS.gene98009:intron | 35.0% | |
| TGTAAAAACTTTGTTGCCTC+TGG | - | chr2.3:43163405-43163424 | None:intergenic | 35.0% | |
| TTAAGTCAAGAATGGGTAGA+GGG | - | chr2.3:43163897-43163916 | None:intergenic | 35.0% | |
| TTCATCTTAACTGGGATCAA+AGG | + | chr2.3:43162852-43162871 | MS.gene98009:intron | 35.0% | |
| TTCTAGCAAAAGCAAGGTAA+TGG | + | chr2.3:43166455-43166474 | MS.gene98009:intron | 35.0% | |
| TTGCTTATCTTCTCAGCAAA+TGG | + | chr2.3:43165513-43165532 | MS.gene98009:intron | 35.0% | |
| TTGTGAAACTGTCATCAAGA+TGG | + | chr2.3:43166025-43166044 | MS.gene98009:intron | 35.0% | |
| TTTAGACAAAGATGAAGCTG+AGG | + | chr2.3:43166935-43166954 | MS.gene98009:CDS | 35.0% | |
| TTTGTTTGCTTCTTTGGCAA+AGG | - | chr2.3:43165249-43165268 | None:intergenic | 35.0% | |
| ! | AAATCACGTGTTTTCACACA+AGG | + | chr2.3:43167170-43167189 | MS.gene98009:intron | 35.0% |
| ! | ACACAATAAATTGGGTTGCA+AGG | - | chr2.3:43164027-43164046 | None:intergenic | 35.0% |
| ! | AGATTATGAGCATTGCCAAT+AGG | + | chr2.3:43163222-43163241 | MS.gene98009:intron | 35.0% |
| ! | ATAATGAAGTGTCTGGTTAC+AGG | + | chr2.3:43164832-43164851 | MS.gene98009:intron | 35.0% |
| ! | ATTTGCTGAGAAGATAAGCA+AGG | - | chr2.3:43165514-43165533 | None:intergenic | 35.0% |
| ! | CAAGTACGTATAAGAGTATG+AGG | + | chr2.3:43163801-43163820 | MS.gene98009:intron | 35.0% |
| ! | GCTCATCTGATTTGAGTTAA+TGG | + | chr2.3:43162170-43162189 | MS.gene98009:intron | 35.0% |
| ! | TGGGTGTTTTCATCTTAACT+GGG | + | chr2.3:43162844-43162863 | MS.gene98009:intron | 35.0% |
| ! | TTGGGTGTTTTCATCTTAAC+TGG | + | chr2.3:43162843-43162862 | MS.gene98009:intron | 35.0% |
| !! | ACATCAATTGGTAGCTTTGT+TGG | - | chr2.3:43163108-43163127 | None:intergenic | 35.0% |
| !! | TAGAGGGAATTTTCTAGAAG+TGG | - | chr2.3:43163881-43163900 | None:intergenic | 35.0% |
| !! | TGTTGCTTTGTTTGCTTCTT+TGG | - | chr2.3:43165255-43165274 | None:intergenic | 35.0% |
| AAACACAGAAGGAGAACTTG+AGG | + | chr2.3:43166168-43166187 | MS.gene98009:intron | 40.0% | |
| AAACATTTACACCAGTGGCA+AGG | - | chr2.3:43164450-43164469 | None:intergenic | 40.0% | |
| AAATAGTAGAAGGTGAAGGG+TGG | + | chr2.3:43162124-43162143 | MS.gene98009:intron | 40.0% | |
| AAGCTCTGCGACAAAGTAAA+AGG | + | chr2.3:43161670-43161689 | MS.gene98009:CDS | 40.0% | |
| AATAGTAGAAGGTGAAGGGT+GGG | + | chr2.3:43162125-43162144 | MS.gene98009:intron | 40.0% | |
| ACAGGCTTCTACTAAAATCC+TGG | + | chr2.3:43164850-43164869 | MS.gene98009:intron | 40.0% | |
| ACTCAACCAGCTTCAATTTG+TGG | + | chr2.3:43166518-43166537 | MS.gene98009:intron | 40.0% | |
| AGAAGCTCCGTATTTAGTTG+AGG | + | chr2.3:43163650-43163669 | MS.gene98009:intron | 40.0% | |
| AGAGATAGCATCACTTCAGA+TGG | + | chr2.3:43162625-43162644 | MS.gene98009:CDS | 40.0% | |
| AGAGGCAAAAACTGGAAATG+AGG | + | chr2.3:43162766-43162785 | MS.gene98009:CDS | 40.0% | |
| AGCAATGGTGGCAATGAATA+AGG | + | chr2.3:43165088-43165107 | MS.gene98009:CDS | 40.0% | |
| AGCTACCAATTGATGTCCAA+AGG | + | chr2.3:43163112-43163131 | MS.gene98009:intron | 40.0% | |
| AGCTCTGCGACAAAGTAAAA+GGG | + | chr2.3:43161671-43161690 | MS.gene98009:CDS | 40.0% | |
| AGGGATTCTGCTTGAATAAG+AGG | - | chr2.3:43164304-43164323 | None:intergenic | 40.0% | |
| AGTTCCCAACAGTCTAATAC+TGG | - | chr2.3:43165783-43165802 | None:intergenic | 40.0% | |
| AGTTTGACAAAATCACGGTG+TGG | - | chr2.3:43162999-43163018 | None:intergenic | 40.0% | |
| ATCAGAAGAACTCACTAACC+AGG | + | chr2.3:43166962-43166981 | MS.gene98009:CDS | 40.0% | |
| ATGCAGTATCAGTCATCGAT+TGG | - | chr2.3:43163458-43163477 | None:intergenic | 40.0% | |
| ATGCAGTATTAGTCACCGAT+TGG | - | chr2.3:43163834-43163853 | None:intergenic | 40.0% | |
| ATTGGGCTCAAAACAAACCT+GGG | - | chr2.3:43167118-43167137 | None:intergenic | 40.0% | |
| CAAGCACTTCAATCTCTACA+GGG | + | chr2.3:43165048-43165067 | MS.gene98009:CDS | 40.0% | |
| CAAGGCAGTTAAGCACTAAA+AGG | - | chr2.3:43162707-43162726 | None:intergenic | 40.0% | |
| CACTATACTGAAGACGATAG+TGG | + | chr2.3:43166089-43166108 | MS.gene98009:intron | 40.0% | |
| CACTATCGTCTTCAGTATAG+TGG | - | chr2.3:43166091-43166110 | None:intergenic | 40.0% | |
| CATCATCTCAAACTGCATCT+CGG | - | chr2.3:43166810-43166829 | None:intergenic | 40.0% | |
| CCAACAGATAACTAATCTGC+AGG | + | chr2.3:43164895-43164914 | MS.gene98009:CDS | 40.0% | |
| CCAACTACTCGAAAACTCTT+AGG | - | chr2.3:43167251-43167270 | None:intergenic | 40.0% | |
| CCGTCAACACGGTAATAATT+TGG | - | chr2.3:43162022-43162041 | None:intergenic | 40.0% | |
| CGGTGAGTTTGACAAAATCA+CGG | - | chr2.3:43163004-43163023 | None:intergenic | 40.0% | |
| CTCATGGTAGTACTTAAAGC+AGG | + | chr2.3:43166726-43166745 | MS.gene98009:intron | 40.0% | |
| CTTCTACTAAAATCCTGGCT+CGG | + | chr2.3:43164855-43164874 | MS.gene98009:CDS | 40.0% | |
| GAAACTTGTCACAGCAATTG+GGG | + | chr2.3:43166385-43166404 | MS.gene98009:intron | 40.0% | |
| GAATAAGAGGTCCTTAGTTG+AGG | - | chr2.3:43164291-43164310 | None:intergenic | 40.0% | |
| GAATTTCAAGCTATGGCTCA+AGG | - | chr2.3:43163715-43163734 | None:intergenic | 40.0% | |
| GGAAACTTGTCACAGCAATT+GGG | + | chr2.3:43166384-43166403 | MS.gene98009:intron | 40.0% | |
| GGAAATGTTTGACAGAAGAC+TGG | + | chr2.3:43165309-43165328 | MS.gene98009:intron | 40.0% | |
| GGTTCTTGATGAAATTGGAG+TGG | + | chr2.3:43167083-43167102 | MS.gene98009:intron | 40.0% | |
| GTCAGAATATTGCTATGACG+TGG | + | chr2.3:43166328-43166347 | MS.gene98009:intron | 40.0% | |
| GTCTGATTACTAAACGGGTA+GGG | - | chr2.3:43163517-43163536 | None:intergenic | 40.0% | |
| GTGTTCCTTTGGACATCAAT+TGG | - | chr2.3:43163120-43163139 | None:intergenic | 40.0% | |
| GTTCAGTTTCTTACTACTCC+AGG | + | chr2.3:43163762-43163781 | MS.gene98009:intron | 40.0% | |
| GTTTGACAAAATCACGGTGT+GGG | - | chr2.3:43162998-43163017 | None:intergenic | 40.0% | |
| TACTCTGTTGTACTCAACCA+CGG | + | chr2.3:43166507-43166526 | MS.gene98009:intron | 40.0% | |
| TAGTTATCTTCTGCTCCGAA+AGG | + | chr2.3:43167356-43167375 | MS.gene98009:intron | 40.0% | |
| TATGTTGAGACGTCTGTTGA+AGG | - | chr2.3:43164175-43164194 | None:intergenic | 40.0% | |
| TATTGGGCTCAAAACAAACC+TGG | - | chr2.3:43167119-43167138 | None:intergenic | 40.0% | |
| TCAATCTCTACAGGGATGAA+GGG | + | chr2.3:43165056-43165075 | MS.gene98009:CDS | 40.0% | |
| TCATTGTGGTGTGCAATCTT+TGG | - | chr2.3:43165716-43165735 | None:intergenic | 40.0% | |
| TCTGATTACTAAACGGGTAG+GGG | - | chr2.3:43163516-43163535 | None:intergenic | 40.0% | |
| TGAAGAAAACTCCAAGGGTT+TGG | - | chr2.3:43162432-43162451 | None:intergenic | 40.0% | |
| TGGATGGCCTCAACTAAATA+CGG | - | chr2.3:43163660-43163679 | None:intergenic | 40.0% | |
| TGTGTGTATCCGAACTGATT+TGG | + | chr2.3:43164777-43164796 | MS.gene98009:intron | 40.0% | |
| TGTTTGATCTGGCAGTTGAA+TGG | + | chr2.3:43162957-43162976 | MS.gene98009:intron | 40.0% | |
| TTAAAGGATTTGGAGGTCCT+TGG | + | chr2.3:43162193-43162212 | MS.gene98009:intron | 40.0% | |
| TTACATTTACCTCCCTCCAA+GGG | + | chr2.3:43162354-43162373 | MS.gene98009:intron | 40.0% | |
| TTCAATCTCTACAGGGATGA+AGG | + | chr2.3:43165055-43165074 | MS.gene98009:CDS | 40.0% | |
| TTCGCCAGTATTAGACTGTT+GGG | + | chr2.3:43165776-43165795 | MS.gene98009:intron | 40.0% | |
| TTTACATTTACCTCCCTCCA+AGG | + | chr2.3:43162353-43162372 | MS.gene98009:intron | 40.0% | |
| TTTCGCCAGTATTAGACTGT+TGG | + | chr2.3:43165775-43165794 | MS.gene98009:intron | 40.0% | |
| ! | AGATTATGAGCATTGCCAGT+AGG | + | chr2.3:43163601-43163620 | MS.gene98009:intron | 40.0% |
| ! | AGCTTTATGGCACTCACAAA+TGG | + | chr2.3:43162329-43162348 | MS.gene98009:intron | 40.0% |
| ! | CAAGTGCGTATAAGAGTATG+AGG | + | chr2.3:43163425-43163444 | MS.gene98009:intron | 40.0% |
| ! | CCTGCAGATTAGTTATCTGT+TGG | - | chr2.3:43164898-43164917 | None:intergenic | 40.0% |
| ! | CTGCTTTAAGTACTACCATG+AGG | - | chr2.3:43166728-43166747 | None:intergenic | 40.0% |
| ! | GCAACTAACTTCTTTTCCTG+CGG | - | chr2.3:43162734-43162753 | None:intergenic | 40.0% |
| ! | GCCAAGAGTACAAGCAATAA+AGG | - | chr2.3:43163935-43163954 | None:intergenic | 40.0% |
| ! | TTATGAGCATTGCCAATAGG+CGG | + | chr2.3:43163225-43163244 | MS.gene98009:intron | 40.0% |
| !! | AGGGAATTTTCTAGAAGTGG+TGG | - | chr2.3:43163878-43163897 | None:intergenic | 40.0% |
| !! | GGGAATTTTCTAGAAGTGGT+GGG | - | chr2.3:43163877-43163896 | None:intergenic | 40.0% |
| !! | GTTTGCTTTGGGAAATGAAG+AGG | + | chr2.3:43164068-43164087 | MS.gene98009:intron | 40.0% |
| !! | TTGGTAGCTTTGTTGGTTAC+AGG | - | chr2.3:43163101-43163120 | None:intergenic | 40.0% |
| !!! | ATTGCCAATAGGCGGTTTTT+TGG | + | chr2.3:43163233-43163252 | MS.gene98009:intron | 40.0% |
| !!! | CCTAAGAGTTTTCGAGTAGT+TGG | + | chr2.3:43167248-43167267 | MS.gene98009:intron | 40.0% |
| AACCATCTCTCGTGCTTGAT+TGG | - | chr2.3:43164231-43164250 | None:intergenic | 45.0% | |
| AATCATTATGCTAGGCGGAG+AGG | + | chr2.3:43164525-43164544 | MS.gene98009:intron | 45.0% | |
| ACAGAAGGAGAACTTGAGGT+TGG | + | chr2.3:43166172-43166191 | MS.gene98009:intron | 45.0% | |
| ACCAGCTTCTAGCAAAAGCA+AGG | + | chr2.3:43166449-43166468 | MS.gene98009:intron | 45.0% | |
| AGAGGTCCTTAGTTGAGGAA+TGG | - | chr2.3:43164286-43164305 | None:intergenic | 45.0% | |
| AGTACTACCATGAGGCTATC+AGG | - | chr2.3:43166720-43166739 | None:intergenic | 45.0% | |
| AGTCGTACAGTCTTCGTTTG+TGG | + | chr2.3:43164199-43164218 | MS.gene98009:intron | 45.0% | |
| ATACTGGCGAAACACTGGAT+TGG | - | chr2.3:43165767-43165786 | None:intergenic | 45.0% | |
| ATAGTAGAAGGTGAAGGGTG+GGG | + | chr2.3:43162126-43162145 | MS.gene98009:intron | 45.0% | |
| ATCACTTTAGCCTGCTTTGC+CGG | - | chr2.3:43165541-43165560 | None:intergenic | 45.0% | |
| ATCAGCACAACTGGACATGA+CGG | + | chr2.3:43165579-43165598 | MS.gene98009:CDS | 45.0% | |
| ATCATTATGCTAGGCGGAGA+GGG | + | chr2.3:43164526-43164545 | MS.gene98009:intron | 45.0% | |
| ATCCACTCTCTCTCTAGTTG+AGG | + | chr2.3:43162924-43162943 | MS.gene98009:intron | 45.0% | |
| ATCGTCTTCAGTATAGTGGC+AGG | - | chr2.3:43166087-43166106 | None:intergenic | 45.0% | |
| ATCTTCTCAGCAAATGGCAC+CGG | + | chr2.3:43165519-43165538 | MS.gene98009:intron | 45.0% | |
| ATGCTGAAAATGCTGCTCCA+AGG | + | chr2.3:43167396-43167415 | MS.gene98009:CDS | 45.0% | |
| CAAGACAACCTCTACCCTTT+GGG | - | chr2.3:43165213-43165232 | None:intergenic | 45.0% | |
| CATCGACACTTCACACATTG+AGG | + | chr2.3:43161956-43161975 | MS.gene98009:intron | 45.0% | |
| CATTGCCACCATTGCTTTAG+TGG | - | chr2.3:43165084-43165103 | None:intergenic | 45.0% | |
| CCAAAAGCAATCAGCACAAC+TGG | + | chr2.3:43165570-43165589 | MS.gene98009:CDS | 45.0% | |
| CGGACATTTAACCGTCAACA+CGG | - | chr2.3:43162033-43162052 | None:intergenic | 45.0% | |
| CTGATTACTAAACGGGTAGG+GGG | - | chr2.3:43163515-43163534 | None:intergenic | 45.0% | |
| CTGGTTCCACAAATTGAAGC+TGG | - | chr2.3:43166527-43166546 | None:intergenic | 45.0% | |
| CTTGAAGCAATCCGACCTTT+CGG | - | chr2.3:43167374-43167393 | None:intergenic | 45.0% | |
| GAAGATTGTGGGCAATAGAG+AGG | + | chr2.3:43166214-43166233 | MS.gene98009:intron | 45.0% | |
| GAGGTCACAGGTTCAATTTG+TGG | + | chr2.3:43166425-43166444 | MS.gene98009:intron | 45.0% | |
| GATAGCATCACTTCAGATGG+AGG | + | chr2.3:43162628-43162647 | MS.gene98009:CDS | 45.0% | |
| GCAAGCACTTCAATCTCTAC+AGG | + | chr2.3:43165047-43165066 | MS.gene98009:CDS | 45.0% | |
| GCATTGTATGATCCACCCAA+AGG | + | chr2.3:43165829-43165848 | MS.gene98009:intron | 45.0% | |
| GGAGTTGCTTATTCGCAACA+AGG | - | chr2.3:43164094-43164113 | None:intergenic | 45.0% | |
| GGATTTCAAGCTATGGCTTG+AGG | - | chr2.3:43163337-43163356 | None:intergenic | 45.0% | |
| GGGAAACTTGTCACAGCAAT+TGG | + | chr2.3:43166383-43166402 | MS.gene98009:intron | 45.0% | |
| GGTCTGATTACTAAACGGGT+AGG | - | chr2.3:43163518-43163537 | None:intergenic | 45.0% | |
| GGTTGAGTACAACAGAGTAC+TGG | - | chr2.3:43166506-43166525 | None:intergenic | 45.0% | |
| GTATGAGGTTGACCTCCAAT+CGG | + | chr2.3:43163440-43163459 | MS.gene98009:intron | 45.0% | |
| GTCTAATACTGGCGAAACAC+TGG | - | chr2.3:43165772-43165791 | None:intergenic | 45.0% | |
| GTTTATGACCCAAAGGGTAG+AGG | + | chr2.3:43165202-43165221 | MS.gene98009:intron | 45.0% | |
| TACTGTAGTATCTGCCCAAC+TGG | + | chr2.3:43164729-43164748 | MS.gene98009:intron | 45.0% | |
| TATCTTCTGCTCCGAAAGGT+CGG | + | chr2.3:43167360-43167379 | MS.gene98009:CDS | 45.0% | |
| TCAAGACAACCTCTACCCTT+TGG | - | chr2.3:43165214-43165233 | None:intergenic | 45.0% | |
| TCAGTTTCTGACTACTCCAG+AGG | + | chr2.3:43163386-43163405 | MS.gene98009:intron | 45.0% | |
| TCTGCATGCACAAAGCAACA+TGG | - | chr2.3:43167496-43167515 | None:intergenic | 45.0% | |
| TGATTACTAAACGGGTAGGG+GGG | - | chr2.3:43163514-43163533 | None:intergenic | 45.0% | |
| TGCACACCATTCCTCAACTA+AGG | + | chr2.3:43164277-43164296 | MS.gene98009:intron | 45.0% | |
| TGTCTAGAGACTTTGTTGCC+TGG | - | chr2.3:43163783-43163802 | None:intergenic | 45.0% | |
| TTCCTCAACTAGAGAGAGAG+TGG | - | chr2.3:43162929-43162948 | None:intergenic | 45.0% | |
| TTGTATGATCCACCCAAAGG+TGG | + | chr2.3:43165832-43165851 | MS.gene98009:intron | 45.0% | |
| TTTGTCCCGCATTTGTACCA+AGG | - | chr2.3:43162213-43162232 | None:intergenic | 45.0% | |
| ! | CAGTATCAGTCATCGATTGG+AGG | - | chr2.3:43163455-43163474 | None:intergenic | 45.0% |
| ! | CAGTATTAGTCACCGATTGG+AGG | - | chr2.3:43163831-43163850 | None:intergenic | 45.0% |
| ! | CATTGCCAGTAGGTGGTTTT+TGG | + | chr2.3:43163611-43163630 | MS.gene98009:intron | 45.0% |
| ! | CTGTGACAAGTTTCCCCTTT+TGG | - | chr2.3:43166379-43166398 | None:intergenic | 45.0% |
| ! | GAAATGTCGGTTGCAACTAG+AGG | + | chr2.3:43161693-43161712 | MS.gene98009:CDS | 45.0% |
| ! | GTTGCTTTGTGCATGCAGAT+CGG | + | chr2.3:43167497-43167516 | MS.gene98009:intron | 45.0% |
| ! | TAGTGGACAGGTCTTGGATA+TGG | - | chr2.3:43162407-43162426 | None:intergenic | 45.0% |
| ! | TTATGAGCATTGCCAGTAGG+TGG | + | chr2.3:43163604-43163623 | MS.gene98009:intron | 45.0% |
| ! | TTCTTTTCCTGCGGTACACA+AGG | - | chr2.3:43162725-43162744 | None:intergenic | 45.0% |
| !! | ACCTTGCTTTTGCTAGAAGC+TGG | - | chr2.3:43166453-43166472 | None:intergenic | 45.0% |
| !! | GGGGATTTTCTAGAAGTGGT+GGG | - | chr2.3:43163495-43163514 | None:intergenic | 45.0% |
| !! | TAGGGGGGATTTTCTAGAAG+TGG | - | chr2.3:43163499-43163518 | None:intergenic | 45.0% |
| !!! | CCAGTTGTGCTGATTGCTTT+TGG | - | chr2.3:43165573-43165592 | None:intergenic | 45.0% |
| !!! | ATATTATATTCATTATTTTA+AGG | - | chr2.3:43161915-43161934 | None:intergenic | 5.0% |
| AAGTAAGCACCACCTTTGGG+TGG | - | chr2.3:43165844-43165863 | None:intergenic | 50.0% | |
| ACCAGTGGCAAGGATGAACA+CGG | - | chr2.3:43164440-43164459 | None:intergenic | 50.0% | |
| CACCAATCAAGCACGAGAGA+TGG | + | chr2.3:43164226-43164245 | MS.gene98009:intron | 50.0% | |
| CACGCCAAAAAACCGCCTAT+TGG | - | chr2.3:43163240-43163259 | None:intergenic | 50.0% | |
| CGAAAGGTCGGATTGCTTCA+AGG | + | chr2.3:43167372-43167391 | MS.gene98009:CDS | 50.0% | |
| GAGGTCCTTGGTACAAATGC+GGG | + | chr2.3:43162205-43162224 | MS.gene98009:intron | 50.0% | |
| GCACACCAAAAACCACCTAC+TGG | - | chr2.3:43163619-43163638 | None:intergenic | 50.0% | |
| GCATGCACAAAGCAACATGG+AGG | - | chr2.3:43167493-43167512 | None:intergenic | 50.0% | |
| GGAGGTCCTTGGTACAAATG+CGG | + | chr2.3:43162204-43162223 | MS.gene98009:intron | 50.0% | |
| GTCTTGGATATGGAGGTTCC+AGG | - | chr2.3:43162397-43162416 | None:intergenic | 50.0% | |
| TAGTAGAAGGTGAAGGGTGG+GGG | + | chr2.3:43162127-43162146 | MS.gene98009:intron | 50.0% | |
| TGGACAGGTCTTGGATATGG+AGG | - | chr2.3:43162404-43162423 | None:intergenic | 50.0% | |
| TGGAGTGGATATTGCATCCC+AGG | + | chr2.3:43167098-43167117 | MS.gene98009:CDS | 50.0% | |
| TGTCCACTAGACCAAACCCT+TGG | + | chr2.3:43162418-43162437 | MS.gene98009:intron | 50.0% | |
| TTAACTGCCTTGTGTACCGC+AGG | + | chr2.3:43162715-43162734 | MS.gene98009:intron | 50.0% | |
| TTGAGGTGTGTCCGACACAT+TGG | + | chr2.3:43161973-43161992 | MS.gene98009:intron | 50.0% | |
| ! | AAGGGTTTGGTCTAGTGGAC+AGG | - | chr2.3:43162419-43162438 | None:intergenic | 50.0% |
| ! | ACTCCAAGGGTTTGGTCTAG+TGG | - | chr2.3:43162424-43162443 | None:intergenic | 50.0% |
| ! | AGTGGGTGTGGTTTTTGCAC+TGG | + | chr2.3:43166107-43166126 | MS.gene98009:intron | 50.0% |
| ! | TTGGTCTAGTGGACAGGTCT+TGG | - | chr2.3:43162413-43162432 | None:intergenic | 50.0% |
| !! | ACTGAAGACGATAGTGGGTG+TGG | + | chr2.3:43166095-43166114 | MS.gene98009:intron | 50.0% |
| !! | GAAGGGTGCCACTAAAGCAA+TGG | + | chr2.3:43165073-43165092 | MS.gene98009:CDS | 50.0% |
| !! | GGGGGATTTTCTAGAAGTGG+TGG | - | chr2.3:43163496-43163515 | None:intergenic | 50.0% |
| ACCGTGTTCATCCTTGCCAC+TGG | + | chr2.3:43164436-43164455 | MS.gene98009:intron | 55.0% | |
| AGGGAAGTCGTGCACAGATC+AGG | + | chr2.3:43164915-43164934 | MS.gene98009:CDS | 55.0% | |
| CCATGTGACTAGGAGGTCAC+AGG | + | chr2.3:43166413-43166432 | MS.gene98009:intron | 55.0% | |
| CCTGTGACCTCCTAGTCACA+TGG | - | chr2.3:43166416-43166435 | None:intergenic | 55.0% | |
| CTACCATGAGGCTATCAGGC+AGG | - | chr2.3:43166716-43166735 | None:intergenic | 55.0% | |
| GGAAGTCGTGCACAGATCAG+GGG | + | chr2.3:43164917-43164936 | MS.gene98009:CDS | 55.0% | |
| GGGAAGTCGTGCACAGATCA+GGG | + | chr2.3:43164916-43164935 | MS.gene98009:CDS | 55.0% | |
| GGGTGTAGCAACTCACACAC+AGG | + | chr2.3:43164937-43164956 | MS.gene98009:CDS | 55.0% | |
| GGTTGCACCATGTGACTAGG+AGG | + | chr2.3:43166406-43166425 | MS.gene98009:intron | 55.0% | |
| TGGGGTTGCACCATGTGACT+AGG | + | chr2.3:43166403-43166422 | MS.gene98009:intron | 55.0% | |
| TGTTGTACTCAACCACGGCG+AGG | + | chr2.3:43166605-43166624 | MS.gene98009:intron | 55.0% | |
| !! | GGGTGCCACTAAAGCAATGG+TGG | + | chr2.3:43165076-43165095 | MS.gene98009:CDS | 55.0% |
| ACCTAACTAGCTGCCGAGCC+AGG | - | chr2.3:43164871-43164890 | None:intergenic | 60.0% | |
| AGAAGGTGAAGGGTGGGGGT+TGG | + | chr2.3:43162131-43162150 | MS.gene98009:intron | 60.0% | |
| ATAAAGCTCTCGCCTCGCCG+TGG | - | chr2.3:43166620-43166639 | None:intergenic | 60.0% | |
| GAAGGTGAAGGGTGGGGGTT+GGG | + | chr2.3:43162132-43162151 | MS.gene98009:intron | 60.0% | |
| GTGCCTGCCTGATAGCCTCA+TGG | + | chr2.3:43166710-43166729 | MS.gene98009:intron | 60.0% | |
| TGAAGGGTGGGGGTTGGGTT+GGG | + | chr2.3:43162137-43162156 | MS.gene98009:intron | 60.0% | |
| !! | GCAAATGGCACCGGCAAAGC+AGG | + | chr2.3:43165528-43165547 | MS.gene98009:intron | 60.0% |
| !! | TCCTGGCTCGGCAGCTAGTT+AGG | + | chr2.3:43164867-43164886 | MS.gene98009:CDS | 60.0% |
| GTGAAGGGTGGGGGTTGGGT+TGG | + | chr2.3:43162136-43162155 | MS.gene98009:intron | 65.0% | |
| !! | CCTCCCTCCAAGGGCACTAG+CGG | + | chr2.3:43162363-43162382 | MS.gene98009:intron | 65.0% |
| !! | CTCCCTCCAAGGGCACTAGC+GGG | + | chr2.3:43162364-43162383 | MS.gene98009:intron | 65.0% |
| !! | TCCCTCCAAGGGCACTAGCG+GGG | + | chr2.3:43162365-43162384 | MS.gene98009:intron | 65.0% |
| AGCCCCGCTAGTGCCCTTGG+AGG | - | chr2.3:43162370-43162389 | None:intergenic | 70.0% | |
| CCGCTAGTGCCCTTGGAGGG+AGG | - | chr2.3:43162366-43162385 | None:intergenic | 70.0% | |
| GCACTAGCGGGGCTCGAACC+TGG | + | chr2.3:43162376-43162395 | MS.gene98009:intron | 70.0% | |
| GCCCCGCTAGTGCCCTTGGA+GGG | - | chr2.3:43162369-43162388 | None:intergenic | 70.0% | |
| TCGAGCCCCGCTAGTGCCCT+TGG | - | chr2.3:43162373-43162392 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 43161663 | 43167575 | 43161663 | ID=MS.gene98009 |
| chr2.3 | mRNA | 43161663 | 43167575 | 43161663 | ID=MS.gene98009.t1;Parent=MS.gene98009 |
| chr2.3 | exon | 43161663 | 43161714 | 43161663 | ID=MS.gene98009.t1.exon1;Parent=MS.gene98009.t1 |
| chr2.3 | CDS | 43161663 | 43161714 | 43161663 | ID=cds.MS.gene98009.t1;Parent=MS.gene98009.t1 |
| chr2.3 | exon | 43162615 | 43162649 | 43162615 | ID=MS.gene98009.t1.exon2;Parent=MS.gene98009.t1 |
| chr2.3 | CDS | 43162615 | 43162649 | 43162615 | ID=cds.MS.gene98009.t1;Parent=MS.gene98009.t1 |
| chr2.3 | exon | 43162737 | 43162787 | 43162737 | ID=MS.gene98009.t1.exon3;Parent=MS.gene98009.t1 |
| chr2.3 | CDS | 43162737 | 43162787 | 43162737 | ID=cds.MS.gene98009.t1;Parent=MS.gene98009.t1 |
| chr2.3 | exon | 43164854 | 43164958 | 43164854 | ID=MS.gene98009.t1.exon4;Parent=MS.gene98009.t1 |
| chr2.3 | CDS | 43164854 | 43164958 | 43164854 | ID=cds.MS.gene98009.t1;Parent=MS.gene98009.t1 |
| chr2.3 | exon | 43165038 | 43165109 | 43165038 | ID=MS.gene98009.t1.exon5;Parent=MS.gene98009.t1 |
| chr2.3 | CDS | 43165038 | 43165109 | 43165038 | ID=cds.MS.gene98009.t1;Parent=MS.gene98009.t1 |
| chr2.3 | exon | 43165529 | 43165600 | 43165529 | ID=MS.gene98009.t1.exon6;Parent=MS.gene98009.t1 |
| chr2.3 | CDS | 43165529 | 43165600 | 43165529 | ID=cds.MS.gene98009.t1;Parent=MS.gene98009.t1 |
| chr2.3 | exon | 43166903 | 43166983 | 43166903 | ID=MS.gene98009.t1.exon7;Parent=MS.gene98009.t1 |
| chr2.3 | CDS | 43166903 | 43166983 | 43166903 | ID=cds.MS.gene98009.t1;Parent=MS.gene98009.t1 |
| chr2.3 | exon | 43167084 | 43167119 | 43167084 | ID=MS.gene98009.t1.exon8;Parent=MS.gene98009.t1 |
| chr2.3 | CDS | 43167084 | 43167119 | 43167084 | ID=cds.MS.gene98009.t1;Parent=MS.gene98009.t1 |
| chr2.3 | exon | 43167359 | 43167417 | 43167359 | ID=MS.gene98009.t1.exon9;Parent=MS.gene98009.t1 |
| chr2.3 | CDS | 43167359 | 43167417 | 43167359 | ID=cds.MS.gene98009.t1;Parent=MS.gene98009.t1 |
| chr2.3 | exon | 43167515 | 43167575 | 43167515 | ID=MS.gene98009.t1.exon10;Parent=MS.gene98009.t1 |
| chr2.3 | CDS | 43167515 | 43167575 | 43167515 | ID=cds.MS.gene98009.t1;Parent=MS.gene98009.t1 |
| Gene Sequence |
| Protein sequence |
