Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007951.t1 | KEH34833.1 | 97.9 | 383 | 7 | 1 | 1 | 382 | 1 | 383 | 2.80E-209 | 737.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007951.t1 | Q680U9 | 74.9 | 382 | 96 | 0 | 1 | 382 | 1 | 382 | 3.0e-167 | 589.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007951.t1 | A0A072V0D8 | 97.9 | 383 | 7 | 1 | 1 | 382 | 1 | 383 | 2.0e-209 | 737.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene76435 | MS.gene007951 | PPI |
| MS.gene89597 | MS.gene007951 | PPI |
| MS.gene007951 | MS.gene044565 | PPI |
| MS.gene007951 | MS.gene80729 | PPI |
| MS.gene007951 | MS.gene012032 | PPI |
| MS.gene032967 | MS.gene007951 | PPI |
| MS.gene038754 | MS.gene007951 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007951.t1 | MTR_3g072660 | 97.911 | 383 | 7 | 1 | 1 | 382 | 1 | 383 | 0.0 | 773 |
| MS.gene007951.t1 | MTR_3g072660 | 97.911 | 383 | 7 | 1 | 1 | 382 | 1 | 383 | 0.0 | 771 |
| MS.gene007951.t1 | MTR_4g088935 | 96.335 | 382 | 14 | 0 | 1 | 382 | 1 | 382 | 0.0 | 760 |
| MS.gene007951.t1 | MTR_3g072660 | 96.084 | 383 | 7 | 2 | 1 | 382 | 1 | 376 | 0.0 | 751 |
| MS.gene007951.t1 | MTR_3g072660 | 96.084 | 383 | 7 | 2 | 1 | 382 | 1 | 376 | 0.0 | 750 |
| MS.gene007951.t1 | MTR_3g072660 | 97.479 | 357 | 8 | 1 | 1 | 356 | 1 | 357 | 0.0 | 719 |
| MS.gene007951.t1 | MTR_3g072660 | 97.306 | 297 | 7 | 1 | 1 | 296 | 1 | 297 | 0.0 | 594 |
| MS.gene007951.t1 | MTR_3g072660 | 99.225 | 258 | 2 | 0 | 125 | 382 | 1 | 258 | 0.0 | 530 |
| MS.gene007951.t1 | MTR_3g072660 | 96.512 | 258 | 2 | 1 | 125 | 382 | 1 | 251 | 0.0 | 508 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007951.t1 | AT4G17020 | 74.869 | 382 | 96 | 0 | 1 | 382 | 1 | 382 | 0.0 | 613 |
| MS.gene007951.t1 | AT4G17020 | 74.869 | 382 | 96 | 0 | 1 | 382 | 1 | 382 | 0.0 | 613 |
| MS.gene007951.t1 | AT4G17020 | 74.869 | 382 | 96 | 0 | 1 | 382 | 1 | 382 | 0.0 | 613 |
Find 75 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAGAAGAGCTTATGTTTA+AGG | 0.129241 | 3.4:-71526895 | None:intergenic |
| AAGCCACTCTCAGTTAATTT+TGG | 0.189946 | 3.4:-71527082 | None:intergenic |
| ACCTGTGCCGGCTAACTTAT+TGG | 0.233617 | 3.4:+71525494 | MS.gene007951:CDS |
| CAAAGTTGCCATTGATAGAT+TGG | 0.301692 | 3.4:+71525551 | MS.gene007951:CDS |
| ATTTCAGAGGAACATAATTA+AGG | 0.312303 | 3.4:+71527582 | MS.gene007951:CDS |
| GATCATTGCCAAGAATTTCA+TGG | 0.333040 | 3.4:+71524937 | MS.gene007951:CDS |
| CACCATGTCCATGAAATTCT+TGG | 0.335342 | 3.4:-71524945 | None:intergenic |
| CAACTTCCAAATCTTATTGT+TGG | 0.350456 | 3.4:+71529497 | MS.gene007951:CDS |
| AATTATGTTCCTCTGAAATT+CGG | 0.351671 | 3.4:-71527578 | None:intergenic |
| ATAGCTCCAACAATAAGATT+TGG | 0.356315 | 3.4:-71529503 | None:intergenic |
| CACAACTTTGGTACATCATC+AGG | 0.365045 | 3.4:+71527214 | MS.gene007951:CDS |
| GTAGAGTTTATCAAGTTTGA+TGG | 0.368766 | 3.4:-71524981 | None:intergenic |
| TGTGAGGCTCCCAACCTTAG+AGG | 0.379390 | 3.4:+71526614 | MS.gene007951:CDS |
| GGCTAACTTATTGGAGGAAT+GGG | 0.388091 | 3.4:+71525503 | MS.gene007951:CDS |
| TTACAGTTATTGCATATTGA+TGG | 0.396001 | 3.4:+71525471 | MS.gene007951:CDS |
| TGGGCTGGTCAAACTTCAAC+AGG | 0.402831 | 3.4:+71527618 | MS.gene007951:CDS |
| ATAAGTCTCAAGATCCTCTA+AGG | 0.406525 | 3.4:-71526628 | None:intergenic |
| ACCCATGTACTAAAAGATTC+TGG | 0.421490 | 3.4:-71526218 | None:intergenic |
| TTGTGCTTTGATAGACCATC+TGG | 0.426688 | 3.4:-71525531 | None:intergenic |
| AAATCAAAATGCCTGAGGTT+AGG | 0.443637 | 3.4:+71524915 | None:intergenic |
| GCCTGAAAATGTCACAGATC+AGG | 0.448319 | 3.4:+71530041 | MS.gene007951:CDS |
| TTAAGGACCTTGCAGACCTT+GGG | 0.454174 | 3.4:+71527599 | MS.gene007951:CDS |
| CTTGATAAACTCTACGAGAA+TGG | 0.454631 | 3.4:+71524989 | MS.gene007951:CDS |
| ATTAAGGACCTTGCAGACCT+TGG | 0.455377 | 3.4:+71527598 | MS.gene007951:CDS |
| CGGCTAACTTATTGGAGGAA+TGG | 0.464320 | 3.4:+71525502 | MS.gene007951:CDS |
| TCCAATAAGTTAGCCGGCAC+AGG | 0.472055 | 3.4:-71525495 | None:intergenic |
| TGCAGATAGTCAGTTTCCTT+CGG | 0.477880 | 3.4:+71529977 | MS.gene007951:intron |
| AGCCTCACAGTAATATTAGA+AGG | 0.477881 | 3.4:-71526600 | None:intergenic |
| AAGGTCTTGTCAACATGACT+TGG | 0.480094 | 3.4:-71526876 | None:intergenic |
| TATAGGGCAGGAAAGAAAGT+TGG | 0.482264 | 3.4:+71527772 | MS.gene007951:intron |
| GTCTCAAGATCCTCTAAGGT+TGG | 0.483810 | 3.4:-71526624 | None:intergenic |
| TGGATACAAATGCACAACTT+TGG | 0.500692 | 3.4:+71527202 | MS.gene007951:CDS |
| TCTCAAGATCCTCTAAGGTT+GGG | 0.504105 | 3.4:-71526623 | None:intergenic |
| TGAATCATCATCAAGAAAAG+AGG | 0.506736 | 3.4:+71527839 | MS.gene007951:CDS |
| AGTTTATCAAGTTTGATGGC+AGG | 0.511969 | 3.4:-71524977 | None:intergenic |
| CAATTGAACCAATCTATCAA+TGG | 0.514654 | 3.4:-71525559 | None:intergenic |
| GACTTATGCTGTGGAACAAT+GGG | 0.515674 | 3.4:+71526644 | MS.gene007951:CDS |
| GTAAACAGAACCTCTGACTC+AGG | 0.517111 | 3.4:-71526941 | None:intergenic |
| TCATCTGCGAAGCTATTCTC+AGG | 0.522090 | 3.4:+71525014 | MS.gene007951:CDS |
| TGCCAAGAATTTCATGGACA+TGG | 0.531687 | 3.4:+71524943 | MS.gene007951:CDS |
| GGACCTTGCAGACCTTGGGC+TGG | 0.536902 | 3.4:+71527603 | MS.gene007951:CDS |
| ACATATTTCTTTGCAAGAGG+TGG | 0.536971 | 3.4:-71525447 | None:intergenic |
| CAGGAGAGAGGTGTTGATGC+TGG | 0.539060 | 3.4:+71527335 | MS.gene007951:intron |
| TCTGACTCAGGAGACGCCGC+TGG | 0.540398 | 3.4:-71526929 | None:intergenic |
| AGGTCTTGTCAACATGACTT+GGG | 0.547217 | 3.4:-71526875 | None:intergenic |
| CATTCCTCCAATAAGTTAGC+CGG | 0.547340 | 3.4:-71525501 | None:intergenic |
| CAATGGCATTACAGCAGACC+AGG | 0.547595 | 3.4:+71529556 | MS.gene007951:CDS |
| AACACATATTTCTTTGCAAG+AGG | 0.550355 | 3.4:-71525450 | None:intergenic |
| AGACTTATGCTGTGGAACAA+TGG | 0.563224 | 3.4:+71526643 | MS.gene007951:CDS |
| AATTACACTGTGAGATATTG+CGG | 0.567848 | 3.4:+71529157 | MS.gene007951:CDS |
| ATTCAGTCATGCTCACTGAA+AGG | 0.573028 | 3.4:-71527821 | None:intergenic |
| TTAGAAGGCATTGATTCCCT+CGG | 0.574898 | 3.4:-71526585 | None:intergenic |
| TCATCCTCGTGTTGCACAGA+GGG | 0.581937 | 3.4:+71530008 | MS.gene007951:CDS |
| GCTCCAAAATTAACTGAGAG+TGG | 0.582979 | 3.4:+71527079 | MS.gene007951:CDS |
| TGACTTGATATCATTCATGC+TGG | 0.584712 | 3.4:+71527358 | MS.gene007951:CDS |
| TTGGCAATGATCCTAACCTC+AGG | 0.587350 | 3.4:-71524926 | None:intergenic |
| GCATATTGATGGACCTGTGC+CGG | 0.588398 | 3.4:+71525482 | MS.gene007951:CDS |
| AGCGGCGTCTCCTGAGTCAG+AGG | 0.589108 | 3.4:+71526931 | MS.gene007951:CDS |
| GAGGAATGGGTGCTTCCAGA+TGG | 0.595776 | 3.4:+71525516 | MS.gene007951:CDS |
| GAGGATGAGCATTCTGCCGA+AGG | 0.597208 | 3.4:-71529993 | None:intergenic |
| TGTGCCGGCTAACTTATTGG+AGG | 0.597403 | 3.4:+71525497 | MS.gene007951:CDS |
| GTTGAAGTTTGACCAGCCCA+AGG | 0.597505 | 3.4:-71527615 | None:intergenic |
| CAAGAATTTCATGGACATGG+TGG | 0.599325 | 3.4:+71524946 | MS.gene007951:CDS |
| TGACCAGCCCAAGGTCTGCA+AGG | 0.612502 | 3.4:-71527606 | None:intergenic |
| ACACATTGACCGAATTTCAG+AGG | 0.620159 | 3.4:+71527569 | MS.gene007951:CDS |
| GGAATATATCACTAATTCTG+AGG | 0.632294 | 3.4:+71527236 | MS.gene007951:CDS |
| GGATCTTGAGACTTATGCTG+TGG | 0.646865 | 3.4:+71526635 | MS.gene007951:CDS |
| TGGCAGTGGAACTTTGCCGA+GGG | 0.654665 | 3.4:+71526569 | MS.gene007951:intron |
| ATGGCAGTGGAACTTTGCCG+AGG | 0.657791 | 3.4:+71526568 | MS.gene007951:intron |
| AAACAAAATCAAAATGCCTG+AGG | 0.666803 | 3.4:+71524910 | None:intergenic |
| ACAACTTTGGTACATCATCA+GGG | 0.674313 | 3.4:+71527215 | MS.gene007951:CDS |
| CTCATCCTCGTGTTGCACAG+AGG | 0.680297 | 3.4:+71530007 | MS.gene007951:CDS |
| GGTACCCTCTGTGCAACACG+AGG | 0.694512 | 3.4:-71530012 | None:intergenic |
| TGCCTTCTAATATTACTGTG+AGG | 0.698083 | 3.4:+71526598 | MS.gene007951:CDS |
| TTATGCTGTGGAACAATGGG+AGG | 0.705086 | 3.4:+71526647 | MS.gene007951:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATAAATATAAATGTAG+CGG | + | chr3.4:71528383-71528402 | MS.gene007951:intron | 10.0% |
| !! | GAATAATATACATAATAAAA+AGG | - | chr3.4:71526031-71526050 | None:intergenic | 10.0% |
| !!! | TAATTTTACTTTTTAAATTG+TGG | + | chr3.4:71529602-71529621 | MS.gene007951:intron | 10.0% |
| !!! | TTTTTTTTTACAACTTTATA+GGG | + | chr3.4:71527756-71527775 | MS.gene007951:intron | 10.0% |
| !!! | TTTTTTTTTTACAACTTTAT+AGG | + | chr3.4:71527755-71527774 | MS.gene007951:intron | 10.0% |
| !! | AAATTTAATTAAAAGGAAAG+AGG | - | chr3.4:71528589-71528608 | None:intergenic | 15.0% |
| !! | ATTAAGACAAATTATTAAAG+TGG | - | chr3.4:71526756-71526775 | None:intergenic | 15.0% |
| !! | TAACTACTTATAAGTTATAA+AGG | - | chr3.4:71529714-71529733 | None:intergenic | 15.0% |
| !! | TAAGTTTAATAGAAAGTTTA+GGG | + | chr3.4:71527892-71527911 | MS.gene007951:intron | 15.0% |
| !! | TTAAGTTAAAAACATCATTA+AGG | + | chr3.4:71529844-71529863 | MS.gene007951:intron | 15.0% |
| !! | TTAAGTTTAATAGAAAGTTT+AGG | + | chr3.4:71527891-71527910 | MS.gene007951:intron | 15.0% |
| !!! | AATTTTGTTCATATGTATAT+AGG | + | chr3.4:71528664-71528683 | MS.gene007951:intron | 15.0% |
| !!! | ACATACAATAATATTTTTGA+GGG | - | chr3.4:71529461-71529480 | None:intergenic | 15.0% |
| !!! | CATTCTATTTAATTTTTTCA+GGG | + | chr3.4:71529084-71529103 | MS.gene007951:intron | 15.0% |
| !!! | TACATACAATAATATTTTTG+AGG | - | chr3.4:71529462-71529481 | None:intergenic | 15.0% |
| !!! | TCATTCTATTTAATTTTTTC+AGG | + | chr3.4:71529083-71529102 | MS.gene007951:intron | 15.0% |
| !! | AAAACAAATCAATTGTGAAA+CGG | - | chr3.4:71527873-71527892 | None:intergenic | 20.0% |
| !! | AAATATTATTGTATGTATGC+AGG | + | chr3.4:71529465-71529484 | MS.gene007951:intron | 20.0% |
| !! | AAGCAAAGAAAAAAAAGAAT+GGG | - | chr3.4:71528110-71528129 | None:intergenic | 20.0% |
| !! | AATATTATTGTATGTATGCA+GGG | + | chr3.4:71529466-71529485 | MS.gene007951:intron | 20.0% |
| !! | ATATTATATGCCTAATCATT+GGG | - | chr3.4:71527547-71527566 | None:intergenic | 20.0% |
| !! | ATTAAATTGCAGTTACAAAA+GGG | - | chr3.4:71527500-71527519 | None:intergenic | 20.0% |
| !! | ATTATGTCTTCAAAATGAAA+GGG | + | chr3.4:71528609-71528628 | MS.gene007951:intron | 20.0% |
| !! | CATAAAATTGTTAATATGAG+TGG | + | chr3.4:71526320-71526339 | MS.gene007951:intron | 20.0% |
| !! | CATACAAATCATAAAATGTT+AGG | + | chr3.4:71525418-71525437 | MS.gene007951:intron | 20.0% |
| !! | GTGAAAAAAAATACTAAACT+GGG | - | chr3.4:71526140-71526159 | None:intergenic | 20.0% |
| !! | TATAAGTACAAGATAAATTG+AGG | - | chr3.4:71529348-71529367 | None:intergenic | 20.0% |
| !! | TATAATTTCTAATACTTACC+TGG | - | chr3.4:71529577-71529596 | None:intergenic | 20.0% |
| !! | TATATTATATGCCTAATCAT+TGG | - | chr3.4:71527548-71527567 | None:intergenic | 20.0% |
| !! | TATTATGTCTTCAAAATGAA+AGG | + | chr3.4:71528608-71528627 | MS.gene007951:intron | 20.0% |
| !! | TTATAGCTGAATTAATAGTT+TGG | - | chr3.4:71529373-71529392 | None:intergenic | 20.0% |
| !! | TTCACCAAAATATTATTGTT+TGG | + | chr3.4:71529410-71529429 | MS.gene007951:intron | 20.0% |
| !! | TTTGAGAGAAATCATAAAAT+GGG | + | chr3.4:71525342-71525361 | MS.gene007951:intron | 20.0% |
| !!! | AACACCAAACAATAATATTT+TGG | - | chr3.4:71529417-71529436 | None:intergenic | 20.0% |
| !!! | ATGTATTCTAAAAGAAACAA+AGG | - | chr3.4:71525894-71525913 | None:intergenic | 20.0% |
| !!! | ATTTTGTTTCAAATGACAAT+TGG | + | chr3.4:71525707-71525726 | MS.gene007951:intron | 20.0% |
| !!! | TAATCTTTTTTGTTAGTAGA+TGG | + | chr3.4:71528218-71528237 | MS.gene007951:intron | 20.0% |
| !!! | TGTATTCTAAAAGAAACAAA+GGG | - | chr3.4:71525893-71525912 | None:intergenic | 20.0% |
| !!! | TTCATATGAATTTTGAATTC+CGG | - | chr3.4:71526453-71526472 | None:intergenic | 20.0% |
| ! | AAAAAGTTCCAAAACAAGAT+TGG | - | chr3.4:71528265-71528284 | None:intergenic | 25.0% |
| ! | AAAAGGAAAGAGGAAATATA+AGG | - | chr3.4:71528579-71528598 | None:intergenic | 25.0% |
| ! | AAAAGTGGAATCAAAAGAAA+AGG | - | chr3.4:71526680-71526699 | None:intergenic | 25.0% |
| ! | AAACTCAAATAAGTACTTGT+GGG | + | chr3.4:71525316-71525335 | MS.gene007951:intron | 25.0% |
| ! | AAAGAGATTTAGCAAAAATC+AGG | - | chr3.4:71525863-71525882 | None:intergenic | 25.0% |
| ! | ACATCATTAAAAATGTGTGA+AGG | + | chr3.4:71528144-71528163 | MS.gene007951:intron | 25.0% |
| ! | ACTTAAAGCAAATTCAAGAA+CGG | - | chr3.4:71525965-71525984 | None:intergenic | 25.0% |
| ! | ATTTCAGAGGAACATAATTA+AGG | + | chr3.4:71527582-71527601 | MS.gene007951:CDS | 25.0% |
| ! | ATTTGTATGCATTAAAACCA+CGG | - | chr3.4:71525407-71525426 | None:intergenic | 25.0% |
| ! | CATTAAATTGCAGTTACAAA+AGG | - | chr3.4:71527501-71527520 | None:intergenic | 25.0% |
| ! | GAAGCAAAGAAAAAAAAGAA+TGG | - | chr3.4:71528111-71528130 | None:intergenic | 25.0% |
| ! | GGTGAAAAAAAATACTAAAC+TGG | - | chr3.4:71526141-71526160 | None:intergenic | 25.0% |
| ! | GTTTGAGAGAAATCATAAAA+TGG | + | chr3.4:71525341-71525360 | MS.gene007951:intron | 25.0% |
| ! | TAAACTCAAATAAGTACTTG+TGG | + | chr3.4:71525315-71525334 | MS.gene007951:intron | 25.0% |
| ! | TACAGAAAACTAATGTTTGT+TGG | + | chr3.4:71528858-71528877 | MS.gene007951:intron | 25.0% |
| ! | TATTATATGCCTAATCATTG+GGG | - | chr3.4:71527546-71527565 | None:intergenic | 25.0% |
| ! | TGTACAGATTAAACAAAAAG+TGG | - | chr3.4:71526695-71526714 | None:intergenic | 25.0% |
| ! | TGTTAGTAGATGGATAAAAA+AGG | + | chr3.4:71528228-71528247 | MS.gene007951:intron | 25.0% |
| ! | TTAACTCATAATACGTGATA+TGG | - | chr3.4:71526361-71526380 | None:intergenic | 25.0% |
| ! | TTACAGTTATTGCATATTGA+TGG | + | chr3.4:71525471-71525490 | MS.gene007951:CDS | 25.0% |
| !! | ACAACTTGAATGTTTGATTT+AGG | + | chr3.4:71526520-71526539 | MS.gene007951:intron | 25.0% |
| !! | ATGACTATTATACAGCATTT+TGG | - | chr3.4:71526429-71526448 | None:intergenic | 25.0% |
| !! | GTATTCTAAAAGAAACAAAG+GGG | - | chr3.4:71525892-71525911 | None:intergenic | 25.0% |
| !! | TATTCTAAAAGAAACAAAGG+GGG | - | chr3.4:71525891-71525910 | None:intergenic | 25.0% |
| !! | TTCAAATTTGACTTCTGTAA+AGG | + | chr3.4:71529684-71529703 | MS.gene007951:intron | 25.0% |
| !! | TTGTATAATGCTTTTGACAA+TGG | + | chr3.4:71529539-71529558 | MS.gene007951:CDS | 25.0% |
| !! | TTGTCTTCTTTTTCTATTCA+TGG | + | chr3.4:71526256-71526275 | MS.gene007951:intron | 25.0% |
| !!! | AAAACAAATTTTTGAGACAC+CGG | - | chr3.4:71527997-71528016 | None:intergenic | 25.0% |
| !!! | AACAAGGTTTTATCACAAAA+AGG | - | chr3.4:71525797-71525816 | None:intergenic | 25.0% |
| !!! | AATACTATCCAATCTTGTTT+TGG | + | chr3.4:71528254-71528273 | MS.gene007951:intron | 25.0% |
| !!! | AATTATGTTCCTCTGAAATT+CGG | - | chr3.4:71527581-71527600 | None:intergenic | 25.0% |
| !!! | ATTTTGGTCCTATAATTTCA+AGG | - | chr3.4:71526413-71526432 | None:intergenic | 25.0% |
| AAATATAAATGTAGCGGTGT+CGG | + | chr3.4:71528389-71528408 | MS.gene007951:intron | 30.0% | |
| AACAAAGTCATTGGAGATTT+AGG | - | chr3.4:71526818-71526837 | None:intergenic | 30.0% | |
| AACACATATTTCTTTGCAAG+AGG | - | chr3.4:71525453-71525472 | None:intergenic | 30.0% | |
| AATAGCTTACTATACTCCTT+CGG | - | chr3.4:71529739-71529758 | None:intergenic | 30.0% | |
| AATTACACTGTGAGATATTG+CGG | + | chr3.4:71529157-71529176 | MS.gene007951:CDS | 30.0% | |
| ACAGCATTGCAGAAAATATT+TGG | - | chr3.4:71529202-71529221 | None:intergenic | 30.0% | |
| ACTAAACTGGGATAAAACAA+GGG | - | chr3.4:71526128-71526147 | None:intergenic | 30.0% | |
| AGATGCAGAATGATTTAACT+TGG | + | chr3.4:71527686-71527705 | MS.gene007951:intron | 30.0% | |
| AGTGAAGGTTATTCAAATGA+AGG | - | chr3.4:71529798-71529817 | None:intergenic | 30.0% | |
| ATAACATGTCAATCGTTCAT+TGG | + | chr3.4:71528955-71528974 | MS.gene007951:intron | 30.0% | |
| ATAGCAGAAACATATAGAGA+AGG | - | chr3.4:71527278-71527297 | None:intergenic | 30.0% | |
| ATAGCTCCAACAATAAGATT+TGG | - | chr3.4:71529506-71529525 | None:intergenic | 30.0% | |
| ATATGTATGGAAGTTTCTGT+TGG | + | chr3.4:71528793-71528812 | MS.gene007951:intron | 30.0% | |
| ATGCTGTATAATAGTCATTC+CGG | + | chr3.4:71526431-71526450 | MS.gene007951:intron | 30.0% | |
| ATGTACCTTAATAGCAACAA+GGG | - | chr3.4:71526303-71526322 | None:intergenic | 30.0% | |
| CAAAGAAGAGCTTATGTTTA+AGG | - | chr3.4:71526898-71526917 | None:intergenic | 30.0% | |
| CAACTTCCAAATCTTATTGT+TGG | + | chr3.4:71529497-71529516 | MS.gene007951:CDS | 30.0% | |
| CAATTGAACCAATCTATCAA+TGG | - | chr3.4:71525562-71525581 | None:intergenic | 30.0% | |
| CAGTATTTGATGTCACAATT+TGG | + | chr3.4:71525995-71526014 | MS.gene007951:intron | 30.0% | |
| CTACTTAAACAAGTACTTGT+GGG | - | chr3.4:71525294-71525313 | None:intergenic | 30.0% | |
| CTTCCAGTTTAAATTTCCAT+AGG | - | chr3.4:71529294-71529313 | None:intergenic | 30.0% | |
| CTTCCTATGGAAATTTAAAC+TGG | + | chr3.4:71529288-71529307 | MS.gene007951:intron | 30.0% | |
| GGAATATATCACTAATTCTG+AGG | + | chr3.4:71527236-71527255 | MS.gene007951:CDS | 30.0% | |
| GTAGAGTTTATCAAGTTTGA+TGG | - | chr3.4:71524984-71525003 | None:intergenic | 30.0% | |
| TAACAAACCTATATAGACGA+TGG | + | chr3.4:71526378-71526397 | MS.gene007951:intron | 30.0% | |
| TACTAAACTGGGATAAAACA+AGG | - | chr3.4:71526129-71526148 | None:intergenic | 30.0% | |
| TATGTACCTTAATAGCAACA+AGG | - | chr3.4:71526304-71526323 | None:intergenic | 30.0% | |
| TCATAATACGTGATATGGAA+GGG | - | chr3.4:71526356-71526375 | None:intergenic | 30.0% | |
| TCTACTTAAACAAGTACTTG+TGG | - | chr3.4:71525295-71525314 | None:intergenic | 30.0% | |
| TGAATCATCATCAAGAAAAG+AGG | + | chr3.4:71527839-71527858 | MS.gene007951:CDS | 30.0% | |
| TGCATTACATTAAGTTCAAG+TGG | - | chr3.4:71527141-71527160 | None:intergenic | 30.0% | |
| TGGTTACTCCTTGAAATTAT+AGG | + | chr3.4:71526402-71526421 | MS.gene007951:intron | 30.0% | |
| TGTTGTACTGTATCTCATAT+TGG | + | chr3.4:71527020-71527039 | MS.gene007951:intron | 30.0% | |
| TTATCGAAACATGACCTTAA+TGG | - | chr3.4:71525075-71525094 | None:intergenic | 30.0% | |
| TTCAAATGAAGGATTGAAGT+CGG | - | chr3.4:71529787-71529806 | None:intergenic | 30.0% | |
| ! | ACATTTTTAATGATGTGCCA+AGG | - | chr3.4:71528140-71528159 | None:intergenic | 30.0% |
| ! | ACTTGAATGTTTGATTTAGG+TGG | + | chr3.4:71526523-71526542 | MS.gene007951:intron | 30.0% |
| ! | ATACGGTTTAGATGATCTTT+TGG | + | chr3.4:71528704-71528723 | MS.gene007951:intron | 30.0% |
| ! | CTTTGATGAAAATTTTCCAG+CGG | + | chr3.4:71526913-71526932 | MS.gene007951:CDS | 30.0% |
| ! | GAATTTGCTTTAAGTTAACG+AGG | + | chr3.4:71525970-71525989 | MS.gene007951:intron | 30.0% |
| ! | GTTTTCTGTAAGTTGTAGTA+TGG | - | chr3.4:71528848-71528867 | None:intergenic | 30.0% |
| ! | TACGGTTTAGATGATCTTTT+GGG | + | chr3.4:71528705-71528724 | MS.gene007951:intron | 30.0% |
| ! | TCAATTTGAGACTTGATATG+TGG | + | chr3.4:71529758-71529777 | MS.gene007951:intron | 30.0% |
| ! | TCCAGAATCTTTTAGTACAT+GGG | + | chr3.4:71526217-71526236 | MS.gene007951:CDS | 30.0% |
| ! | TTTTTACAACTTTATAGGGC+AGG | + | chr3.4:71527760-71527779 | MS.gene007951:intron | 30.0% |
| !! | AGATATTGCGGTTATTTTCA+AGG | + | chr3.4:71529169-71529188 | MS.gene007951:CDS | 30.0% |
| !! | AGCTTAGTTTTCATGTCATT+GGG | + | chr3.4:71527381-71527400 | MS.gene007951:CDS | 30.0% |
| !!! | AAACTGGAAGTTGTTTTTCA+TGG | + | chr3.4:71529304-71529323 | MS.gene007951:intron | 30.0% |
| !!! | AGGTTTGTTGCTAATTTTGT+TGG | - | chr3.4:71527804-71527823 | None:intergenic | 30.0% |
| !!! | ATTTTTTTTCACCTTCTTGC+AGG | + | chr3.4:71526148-71526167 | MS.gene007951:intron | 30.0% |
| !!! | GAAGTTGTTTTTCATGGAAT+AGG | + | chr3.4:71529310-71529329 | MS.gene007951:intron | 30.0% |
| !!! | TGATTTTTTCCCCAATGATT+AGG | + | chr3.4:71527534-71527553 | MS.gene007951:intron | 30.0% |
| AAAAAGAATGGGACACTTGT+CGG | - | chr3.4:71528099-71528118 | None:intergenic | 35.0% | |
| AAACCTATATAGACGATGGT+TGG | + | chr3.4:71526382-71526401 | MS.gene007951:intron | 35.0% | |
| AACAAAGACACACAAAGATG+TGG | - | chr3.4:71526055-71526074 | None:intergenic | 35.0% | |
| ACAACTTTGGTACATCATCA+GGG | + | chr3.4:71527215-71527234 | MS.gene007951:CDS | 35.0% | |
| ACATATTTCTTTGCAAGAGG+TGG | - | chr3.4:71525450-71525469 | None:intergenic | 35.0% | |
| ACCCATGTACTAAAAGATTC+TGG | - | chr3.4:71526221-71526240 | None:intergenic | 35.0% | |
| AGCCTCACAGTAATATTAGA+AGG | - | chr3.4:71526603-71526622 | None:intergenic | 35.0% | |
| AGTTTCTGTTGGACATTATC+AGG | + | chr3.4:71528804-71528823 | MS.gene007951:intron | 35.0% | |
| ATAAGTCTCAAGATCCTCTA+AGG | - | chr3.4:71526631-71526650 | None:intergenic | 35.0% | |
| ATAGCTTACTATACTCCTTC+GGG | - | chr3.4:71529738-71529757 | None:intergenic | 35.0% | |
| ATCAGTTTGAACCATTTCAG+AGG | - | chr3.4:71525685-71525704 | None:intergenic | 35.0% | |
| ATTTGATGCGTACCAAAAAC+TGG | - | chr3.4:71527108-71527127 | None:intergenic | 35.0% | |
| CAAAGTTGCCATTGATAGAT+TGG | + | chr3.4:71525551-71525570 | MS.gene007951:CDS | 35.0% | |
| CAACTTATGGGCATATCATA+AGG | + | chr3.4:71525243-71525262 | MS.gene007951:intron | 35.0% | |
| CACATGCAACAGATAAAACA+AGG | - | chr3.4:71525813-71525832 | None:intergenic | 35.0% | |
| CCTTAGTTTAGGCTAACATT+TGG | - | chr3.4:71525733-71525752 | None:intergenic | 35.0% | |
| CTCATAATACGTGATATGGA+AGG | - | chr3.4:71526357-71526376 | None:intergenic | 35.0% | |
| CTTATAAGTAGTTATCCCGA+AGG | + | chr3.4:71529720-71529739 | MS.gene007951:intron | 35.0% | |
| CTTGATAAACTCTACGAGAA+TGG | + | chr3.4:71524989-71525008 | MS.gene007951:CDS | 35.0% | |
| GAACATGACAAAAGACTAGA+GGG | - | chr3.4:71529246-71529265 | None:intergenic | 35.0% | |
| GATCATTGCCAAGAATTTCA+TGG | + | chr3.4:71524937-71524956 | MS.gene007951:CDS | 35.0% | |
| GATGTATAAGACAGTGAACA+GGG | - | chr3.4:71528557-71528576 | None:intergenic | 35.0% | |
| GCATTGCAGAAAATATTTGG+TGG | - | chr3.4:71529199-71529218 | None:intergenic | 35.0% | |
| GTGTTGTATGAGTATCATAG+AGG | - | chr3.4:71528063-71528082 | None:intergenic | 35.0% | |
| TAACCAACCATCGTCTATAT+AGG | - | chr3.4:71526388-71526407 | None:intergenic | 35.0% | |
| TAAGTTGCAACAAGAAACAC+TGG | - | chr3.4:71526851-71526870 | None:intergenic | 35.0% | |
| TACACCTTGTAATGTGTTGA+AGG | + | chr3.4:71525770-71525789 | MS.gene007951:intron | 35.0% | |
| TCTGTAAGTTGTAGTATGGA+CGG | - | chr3.4:71528844-71528863 | None:intergenic | 35.0% | |
| TGAACGATTGACATGTTATG+AGG | - | chr3.4:71528954-71528973 | None:intergenic | 35.0% | |
| TGACTTGATATCATTCATGC+TGG | + | chr3.4:71527358-71527377 | MS.gene007951:CDS | 35.0% | |
| TGCCTTCTAATATTACTGTG+AGG | + | chr3.4:71526598-71526617 | MS.gene007951:CDS | 35.0% | |
| TGGATACAAATGCACAACTT+TGG | + | chr3.4:71527202-71527221 | MS.gene007951:CDS | 35.0% | |
| TTACCGCAAAACAAAGTCAT+TGG | - | chr3.4:71526827-71526846 | None:intergenic | 35.0% | |
| TTAGCCTAAACTAAGGAGTT+TGG | + | chr3.4:71525737-71525756 | MS.gene007951:intron | 35.0% | |
| TTCACGTAGAATTTCAGTGA+AGG | - | chr3.4:71529813-71529832 | None:intergenic | 35.0% | |
| TTGCTATGAATTACAGCTGA+TGG | + | chr3.4:71527182-71527201 | MS.gene007951:intron | 35.0% | |
| TTTCTCAATGCCTACCATTA+AGG | + | chr3.4:71525058-71525077 | MS.gene007951:intron | 35.0% | |
| TTTGCACTCTGTCATATATG+TGG | + | chr3.4:71526996-71527015 | MS.gene007951:intron | 35.0% | |
| ! | AAGCCACTCTCAGTTAATTT+TGG | - | chr3.4:71527085-71527104 | None:intergenic | 35.0% |
| ! | ACGGTTTAGATGATCTTTTG+GGG | + | chr3.4:71528706-71528725 | MS.gene007951:intron | 35.0% |
| ! | AGTTTATCAAGTTTGATGGC+AGG | - | chr3.4:71524980-71524999 | None:intergenic | 35.0% |
| ! | CCAAATGTTAGCCTAAACTA+AGG | + | chr3.4:71525730-71525749 | MS.gene007951:intron | 35.0% |
| ! | CTCCAGAATCTTTTAGTACA+TGG | + | chr3.4:71526216-71526235 | MS.gene007951:CDS | 35.0% |
| ! | CTGTTTTGCTTGCATATGTA+TGG | + | chr3.4:71528780-71528799 | MS.gene007951:intron | 35.0% |
| ! | GACAATTTATGCCTCTGAAA+TGG | + | chr3.4:71525671-71525690 | MS.gene007951:intron | 35.0% |
| ! | TATGAGTATCATAGAGGTGT+CGG | - | chr3.4:71528057-71528076 | None:intergenic | 35.0% |
| ! | TTGTTCCCTTGTTGCTATTA+AGG | + | chr3.4:71526295-71526314 | MS.gene007951:intron | 35.0% |
| ! | TTTTTGTTGAAGCTCTTGAC+AGG | + | chr3.4:71525586-71525605 | MS.gene007951:CDS | 35.0% |
| !! | AATGGTAGGCATTGAGAAAT+AGG | - | chr3.4:71525057-71525076 | None:intergenic | 35.0% |
| !! | GAGCTTAGTTTTCATGTCAT+TGG | + | chr3.4:71527380-71527399 | MS.gene007951:CDS | 35.0% |
| !! | GCTTAGTTTTCATGTCATTG+GGG | + | chr3.4:71527382-71527401 | MS.gene007951:CDS | 35.0% |
| !!! | TCTCCAATGACTTTGTTTTG+CGG | + | chr3.4:71526821-71526840 | MS.gene007951:intron | 35.0% |
| !!! | TTTTCAGGGATTTGTTGTTG+TGG | + | chr3.4:71529098-71529117 | MS.gene007951:intron | 35.0% |
| AACTCCTTAGCTATGAAGCA+TGG | + | chr3.4:71527916-71527935 | MS.gene007951:intron | 40.0% | |
| AAGGCAATGTTGATCAACGA+GGG | + | chr3.4:71528163-71528182 | MS.gene007951:intron | 40.0% | |
| AATAAGCTGCGAGCAACTTA+TGG | + | chr3.4:71525230-71525249 | MS.gene007951:intron | 40.0% | |
| ACAAGGGTCGAAAGTGAAAA+TGG | - | chr3.4:71526112-71526131 | None:intergenic | 40.0% | |
| ACACATTGACCGAATTTCAG+AGG | + | chr3.4:71527569-71527588 | MS.gene007951:CDS | 40.0% | |
| AGACTTATGCTGTGGAACAA+TGG | + | chr3.4:71526643-71526662 | MS.gene007951:CDS | 40.0% | |
| AGGAAGTTCCAAAACCCAAA+GGG | - | chr3.4:71529274-71529293 | None:intergenic | 40.0% | |
| AGGTCCTTCAACACATTACA+AGG | - | chr3.4:71525777-71525796 | None:intergenic | 40.0% | |
| ATAAGCTGCGAGCAACTTAT+GGG | + | chr3.4:71525231-71525250 | MS.gene007951:intron | 40.0% | |
| ATTCAGTCATGCTCACTGAA+AGG | - | chr3.4:71527824-71527843 | None:intergenic | 40.0% | |
| ATTGTGGTACTCACTGTAGA+TGG | + | chr3.4:71529618-71529637 | MS.gene007951:intron | 40.0% | |
| CAAGAATTTCATGGACATGG+TGG | + | chr3.4:71524946-71524965 | MS.gene007951:CDS | 40.0% | |
| CACAACTTTGGTACATCATC+AGG | + | chr3.4:71527214-71527233 | MS.gene007951:CDS | 40.0% | |
| CACCATGTCCATGAAATTCT+TGG | - | chr3.4:71524948-71524967 | None:intergenic | 40.0% | |
| CACGTTCTTGTGGTTGAATA+TGG | + | chr3.4:71526549-71526568 | MS.gene007951:intron | 40.0% | |
| CATGTCAATCGTTCATTGGT+TGG | + | chr3.4:71528959-71528978 | MS.gene007951:intron | 40.0% | |
| CATTCCTCCAATAAGTTAGC+CGG | - | chr3.4:71525504-71525523 | None:intergenic | 40.0% | |
| CGAAACATGACCTTAATGGT+AGG | - | chr3.4:71525071-71525090 | None:intergenic | 40.0% | |
| GACTTATGCTGTGGAACAAT+GGG | + | chr3.4:71526644-71526663 | MS.gene007951:CDS | 40.0% | |
| GATACTCATACAACACGTGT+TGG | + | chr3.4:71528067-71528086 | MS.gene007951:intron | 40.0% | |
| GCTCCAAAATTAACTGAGAG+TGG | + | chr3.4:71527079-71527098 | MS.gene007951:CDS | 40.0% | |
| GGAACATGACAAAAGACTAG+AGG | - | chr3.4:71529247-71529266 | None:intergenic | 40.0% | |
| GGATGTATAAGACAGTGAAC+AGG | - | chr3.4:71528558-71528577 | None:intergenic | 40.0% | |
| GGCTAACTTATTGGAGGAAT+GGG | + | chr3.4:71525503-71525522 | MS.gene007951:CDS | 40.0% | |
| GTGTCCAAACTCCTTAGTTT+AGG | - | chr3.4:71525744-71525763 | None:intergenic | 40.0% | |
| TAGGAAGTTCCAAAACCCAA+AGG | - | chr3.4:71529275-71529294 | None:intergenic | 40.0% | |
| TATAGGGCAGGAAAGAAAGT+TGG | + | chr3.4:71527772-71527791 | MS.gene007951:intron | 40.0% | |
| TATGAAGCATGGACACCTAA+AGG | + | chr3.4:71527927-71527946 | MS.gene007951:intron | 40.0% | |
| TGCAGATAGTCAGTTTCCTT+CGG | + | chr3.4:71529977-71529996 | MS.gene007951:intron | 40.0% | |
| TGCCAAGAATTTCATGGACA+TGG | + | chr3.4:71524943-71524962 | MS.gene007951:CDS | 40.0% | |
| TTGTGCTTTGATAGACCATC+TGG | - | chr3.4:71525534-71525553 | None:intergenic | 40.0% | |
| ! | AAGGTCTTGTCAACATGACT+TGG | - | chr3.4:71526879-71526898 | None:intergenic | 40.0% |
| ! | ACAAGTACTTGTGGGCTATT+TGG | - | chr3.4:71525286-71525305 | None:intergenic | 40.0% |
| ! | AGGTCTTGTCAACATGACTT+GGG | - | chr3.4:71526878-71526897 | None:intergenic | 40.0% |
| ! | CATCAGTCTGAAGTAGTAAC+AGG | - | chr3.4:71528930-71528949 | None:intergenic | 40.0% |
| ! | CGGTTTAGATGATCTTTTGG+GGG | + | chr3.4:71528707-71528726 | MS.gene007951:intron | 40.0% |
| ! | TAGTTTTCATGTCATTGGGG+AGG | + | chr3.4:71527385-71527404 | MS.gene007951:CDS | 40.0% |
| ! | TGCTCTTCATCGTCTACTTT+TGG | + | chr3.4:71527310-71527329 | MS.gene007951:intron | 40.0% |
| ! | TTTTCGTTCTTCCTGCAAGA+AGG | - | chr3.4:71526162-71526181 | None:intergenic | 40.0% |
| !! | TAGATGATCTTTTGGGGGAA+GGG | + | chr3.4:71528712-71528731 | MS.gene007951:intron | 40.0% |
| !! | TCTCAAGATCCTCTAAGGTT+GGG | - | chr3.4:71526626-71526645 | None:intergenic | 40.0% |
| !! | TTAGAAGGCATTGATTCCCT+CGG | - | chr3.4:71526588-71526607 | None:intergenic | 40.0% |
| !! | TTAGATGATCTTTTGGGGGA+AGG | + | chr3.4:71528711-71528730 | MS.gene007951:intron | 40.0% |
| !!! | TTGGGTTTTGGAACTTCCTA+TGG | + | chr3.4:71529275-71529294 | MS.gene007951:intron | 40.0% |
| AGGCAATGTTGATCAACGAG+GGG | + | chr3.4:71528164-71528183 | MS.gene007951:intron | 45.0% | |
| AGTTCCAAAACCCAAAGGGA+AGG | - | chr3.4:71529270-71529289 | None:intergenic | 45.0% | |
| ATTAAGGACCTTGCAGACCT+TGG | + | chr3.4:71527598-71527617 | MS.gene007951:CDS | 45.0% | |
| CGGCTAACTTATTGGAGGAA+TGG | + | chr3.4:71525502-71525521 | MS.gene007951:CDS | 45.0% | |
| CTAAAGGATTAGGCGTGTCA+CGG | + | chr3.4:71527943-71527962 | MS.gene007951:intron | 45.0% | |
| CTGGTCAAACTTCAACAGGT+TGG | + | chr3.4:71527622-71527641 | MS.gene007951:intron | 45.0% | |
| CTTGTGGTTGAATATGGCAG+TGG | + | chr3.4:71526555-71526574 | MS.gene007951:intron | 45.0% | |
| GAAGGCAATGTTGATCAACG+AGG | + | chr3.4:71528162-71528181 | MS.gene007951:intron | 45.0% | |
| GCATGGACACCTAAAGGATT+AGG | + | chr3.4:71527933-71527952 | MS.gene007951:intron | 45.0% | |
| GGATCTTGAGACTTATGCTG+TGG | + | chr3.4:71526635-71526654 | MS.gene007951:CDS | 45.0% | |
| GGGCTATTTGGAAGAGCTTA+TGG | - | chr3.4:71525274-71525293 | None:intergenic | 45.0% | |
| GTAAACAGAACCTCTGACTC+AGG | - | chr3.4:71526944-71526963 | None:intergenic | 45.0% | |
| GTGTCCATGCTTCATAGCTA+AGG | - | chr3.4:71527923-71527942 | None:intergenic | 45.0% | |
| GTTCCAAAACCCAAAGGGAA+GGG | - | chr3.4:71529269-71529288 | None:intergenic | 45.0% | |
| GTTGGACATTATCAGGCTCT+GGG | + | chr3.4:71528811-71528830 | MS.gene007951:intron | 45.0% | |
| TAGGTGGTAACACGTTCTTG+TGG | + | chr3.4:71526539-71526558 | MS.gene007951:intron | 45.0% | |
| TCATCTGCGAAGCTATTCTC+AGG | + | chr3.4:71525014-71525033 | MS.gene007951:CDS | 45.0% | |
| TGTGCAACAGATTCTCAGCA+AGG | - | chr3.4:71527426-71527445 | None:intergenic | 45.0% | |
| TGTTGGACATTATCAGGCTC+TGG | + | chr3.4:71528810-71528829 | MS.gene007951:intron | 45.0% | |
| TTAAGGACCTTGCAGACCTT+GGG | + | chr3.4:71527599-71527618 | MS.gene007951:CDS | 45.0% | |
| TTATGCTGTGGAACAATGGG+AGG | + | chr3.4:71526647-71526666 | MS.gene007951:CDS | 45.0% | |
| TTCCAAAACCCAAAGGGAAG+GGG | - | chr3.4:71529268-71529287 | None:intergenic | 45.0% | |
| TTCTTTGCTTCGACACACCT+TGG | + | chr3.4:71528120-71528139 | MS.gene007951:intron | 45.0% | |
| TTCTTTGCTTCGACACTCGT+TGG | + | chr3.4:71528023-71528042 | MS.gene007951:intron | 45.0% | |
| TTGGCAATGATCCTAACCTC+AGG | - | chr3.4:71524929-71524948 | None:intergenic | 45.0% | |
| ! | TGAGAGTGGCTTCCAGTTTT+TGG | + | chr3.4:71527093-71527112 | MS.gene007951:CDS | 45.0% |
| !! | AGATGATCTTTTGGGGGAAG+GGG | + | chr3.4:71528713-71528732 | MS.gene007951:intron | 45.0% |
| !! | CGTTCATTGGTTGGCTTTAG+TGG | + | chr3.4:71528968-71528987 | MS.gene007951:intron | 45.0% |
| !! | GTCTCAAGATCCTCTAAGGT+TGG | - | chr3.4:71526627-71526646 | None:intergenic | 45.0% |
| !! | TCATCGTCTACTTTTGGTGC+AGG | + | chr3.4:71527316-71527335 | MS.gene007951:intron | 45.0% |
| !! | ACATAATAAATTTAATTAAA+AGG | - | chr3.4:71528596-71528615 | None:intergenic | 5.0% |
| !! | AGTATATATTTAATTATATA+CGG | + | chr3.4:71528687-71528706 | MS.gene007951:intron | 5.0% |
| ATAGCTCCTCAGACATGCCA+AGG | + | chr3.4:71528475-71528494 | MS.gene007951:intron | 50.0% | |
| CAATGGCATTACAGCAGACC+AGG | + | chr3.4:71529556-71529575 | MS.gene007951:CDS | 50.0% | |
| CGACGTGTCAATATCGTGTC+AGG | + | chr3.4:71528440-71528459 | MS.gene007951:intron | 50.0% | |
| CGTGACACGCCTAATCCTTT+AGG | - | chr3.4:71527945-71527964 | None:intergenic | 50.0% | |
| GGCAATGTTGATCAACGAGG+GGG | + | chr3.4:71528165-71528184 | MS.gene007951:intron | 50.0% | |
| GTCATGTTCCCCTTCCCTTT+GGG | + | chr3.4:71529257-71529276 | MS.gene007951:intron | 50.0% | |
| GTTGAAGTTTGACCAGCCCA+AGG | - | chr3.4:71527618-71527637 | None:intergenic | 50.0% | |
| TAGCTCCTCAGACATGCCAA+GGG | + | chr3.4:71528476-71528495 | MS.gene007951:intron | 50.0% | |
| TCATCCTCGTGTTGCACAGA+GGG | + | chr3.4:71530008-71530027 | MS.gene007951:CDS | 50.0% | |
| TCCAATAAGTTAGCCGGCAC+AGG | - | chr3.4:71525498-71525517 | None:intergenic | 50.0% | |
| TGAACAGGGCACAGAGAGAA+AGG | - | chr3.4:71528543-71528562 | None:intergenic | 50.0% | |
| TGCTTCGACACTCGTTGGAT+TGG | + | chr3.4:71528028-71528047 | MS.gene007951:intron | 50.0% | |
| TGTCATGTTCCCCTTCCCTT+TGG | + | chr3.4:71529256-71529275 | MS.gene007951:intron | 50.0% | |
| TTGGCATGTCTGAGGAGCTA+TGG | - | chr3.4:71528476-71528495 | None:intergenic | 50.0% | |
| ! | AGAGTTGGTCCGACACTTGT+CGG | - | chr3.4:71527972-71527991 | None:intergenic | 50.0% |
| ! | GCATATTGATGGACCTGTGC+CGG | + | chr3.4:71525482-71525501 | MS.gene007951:CDS | 50.0% |
| ! | TTTGAGACACCGGTCAGAGT+TGG | - | chr3.4:71527987-71528006 | None:intergenic | 50.0% |
| !! | ACCTGTGCCGGCTAACTTAT+TGG | + | chr3.4:71525494-71525513 | MS.gene007951:CDS | 50.0% |
| !! | CTACTTTTGGTGCAGGAGAG+AGG | + | chr3.4:71527323-71527342 | MS.gene007951:intron | 50.0% |
| !! | GTGACATTTTCAGGCACTGC+TGG | - | chr3.4:71530036-71530055 | None:intergenic | 50.0% |
| !! | TGGGCTGGTCAAACTTCAAC+AGG | + | chr3.4:71527618-71527637 | MS.gene007951:CDS | 50.0% |
| !! | TGTGCCGGCTAACTTATTGG+AGG | + | chr3.4:71525497-71525516 | MS.gene007951:CDS | 50.0% |
| !! | TTCCCCTTCCCTTTGGGTTT+TGG | + | chr3.4:71529263-71529282 | MS.gene007951:intron | 50.0% |
| !!! | TCAGTTTTGAACGTGCTCCG+TGG | + | chr3.4:71525387-71525406 | MS.gene007951:intron | 50.0% |
| ATGGCAGTGGAACTTTGCCG+AGG | + | chr3.4:71526568-71526587 | MS.gene007951:intron | 55.0% | |
| CTCATCCTCGTGTTGCACAG+AGG | + | chr3.4:71530007-71530026 | MS.gene007951:CDS | 55.0% | |
| GAGGAATGGGTGCTTCCAGA+TGG | + | chr3.4:71525516-71525535 | MS.gene007951:CDS | 55.0% | |
| GAGGATGAGCATTCTGCCGA+AGG | - | chr3.4:71529996-71530015 | None:intergenic | 55.0% | |
| TCACGGTGTCCGACAAGTGT+CGG | + | chr3.4:71527960-71527979 | MS.gene007951:intron | 55.0% | |
| TGGCAGTGGAACTTTGCCGA+GGG | + | chr3.4:71526569-71526588 | MS.gene007951:intron | 55.0% | |
| TGTGAGGCTCCCAACCTTAG+AGG | + | chr3.4:71526614-71526633 | MS.gene007951:CDS | 55.0% | |
| ! | AGTGTCGGACCAACTCTGAC+CGG | + | chr3.4:71527975-71527994 | MS.gene007951:intron | 55.0% |
| !! | CAGGAGAGAGGTGTTGATGC+TGG | + | chr3.4:71527335-71527354 | MS.gene007951:intron | 55.0% |
| CACTACAGAGCCTCCACCCT+TGG | - | chr3.4:71528495-71528514 | None:intergenic | 60.0% | |
| CTCAGACATGCCAAGGGTGG+AGG | + | chr3.4:71528482-71528501 | MS.gene007951:intron | 60.0% | |
| CTCCACCCTTGGCATGTCTG+AGG | - | chr3.4:71528484-71528503 | None:intergenic | 60.0% | |
| CTCCTCAGACATGCCAAGGG+TGG | + | chr3.4:71528479-71528498 | MS.gene007951:intron | 60.0% | |
| GGTACCCTCTGTGCAACACG+AGG | - | chr3.4:71530015-71530034 | None:intergenic | 60.0% | |
| TGACCAGCCCAAGGTCTGCA+AGG | - | chr3.4:71527609-71527628 | None:intergenic | 60.0% | |
| AGCGGCGTCTCCTGAGTCAG+AGG | + | chr3.4:71526931-71526950 | MS.gene007951:CDS | 65.0% | |
| GGACCTTGCAGACCTTGGGC+TGG | + | chr3.4:71527603-71527622 | MS.gene007951:CDS | 65.0% | |
| TCTGACTCAGGAGACGCCGC+TGG | - | chr3.4:71526932-71526951 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 71524923 | 71530062 | 71524923 | ID=MS.gene007951 |
| chr3.4 | mRNA | 71524923 | 71530062 | 71524923 | ID=MS.gene007951.t1;Parent=MS.gene007951 |
| chr3.4 | exon | 71524923 | 71525035 | 71524923 | ID=MS.gene007951.t1.exon1;Parent=MS.gene007951.t1 |
| chr3.4 | CDS | 71524923 | 71525035 | 71524923 | ID=cds.MS.gene007951.t1;Parent=MS.gene007951.t1 |
| chr3.4 | exon | 71525440 | 71525607 | 71525440 | ID=MS.gene007951.t1.exon2;Parent=MS.gene007951.t1 |
| chr3.4 | CDS | 71525440 | 71525607 | 71525440 | ID=cds.MS.gene007951.t1;Parent=MS.gene007951.t1 |
| chr3.4 | exon | 71526170 | 71526238 | 71526170 | ID=MS.gene007951.t1.exon3;Parent=MS.gene007951.t1 |
| chr3.4 | CDS | 71526170 | 71526238 | 71526170 | ID=cds.MS.gene007951.t1;Parent=MS.gene007951.t1 |
| chr3.4 | exon | 71526575 | 71526668 | 71526575 | ID=MS.gene007951.t1.exon4;Parent=MS.gene007951.t1 |
| chr3.4 | CDS | 71526575 | 71526668 | 71526575 | ID=cds.MS.gene007951.t1;Parent=MS.gene007951.t1 |
| chr3.4 | exon | 71526852 | 71526952 | 71526852 | ID=MS.gene007951.t1.exon5;Parent=MS.gene007951.t1 |
| chr3.4 | CDS | 71526852 | 71526952 | 71526852 | ID=cds.MS.gene007951.t1;Parent=MS.gene007951.t1 |
| chr3.4 | exon | 71527069 | 71527114 | 71527069 | ID=MS.gene007951.t1.exon6;Parent=MS.gene007951.t1 |
| chr3.4 | CDS | 71527069 | 71527114 | 71527069 | ID=cds.MS.gene007951.t1;Parent=MS.gene007951.t1 |
| chr3.4 | exon | 71527198 | 71527257 | 71527198 | ID=MS.gene007951.t1.exon7;Parent=MS.gene007951.t1 |
| chr3.4 | CDS | 71527198 | 71527257 | 71527198 | ID=cds.MS.gene007951.t1;Parent=MS.gene007951.t1 |
| chr3.4 | exon | 71527338 | 71527406 | 71527338 | ID=MS.gene007951.t1.exon8;Parent=MS.gene007951.t1 |
| chr3.4 | CDS | 71527338 | 71527406 | 71527338 | ID=cds.MS.gene007951.t1;Parent=MS.gene007951.t1 |
| chr3.4 | exon | 71527556 | 71527639 | 71527556 | ID=MS.gene007951.t1.exon9;Parent=MS.gene007951.t1 |
| chr3.4 | CDS | 71527556 | 71527639 | 71527556 | ID=cds.MS.gene007951.t1;Parent=MS.gene007951.t1 |
| chr3.4 | exon | 71527777 | 71527860 | 71527777 | ID=MS.gene007951.t1.exon10;Parent=MS.gene007951.t1 |
| chr3.4 | CDS | 71527777 | 71527860 | 71527777 | ID=cds.MS.gene007951.t1;Parent=MS.gene007951.t1 |
| chr3.4 | exon | 71529105 | 71529190 | 71529105 | ID=MS.gene007951.t1.exon11;Parent=MS.gene007951.t1 |
| chr3.4 | CDS | 71529105 | 71529190 | 71529105 | ID=cds.MS.gene007951.t1;Parent=MS.gene007951.t1 |
| chr3.4 | exon | 71529487 | 71529577 | 71529487 | ID=MS.gene007951.t1.exon12;Parent=MS.gene007951.t1 |
| chr3.4 | CDS | 71529487 | 71529577 | 71529487 | ID=cds.MS.gene007951.t1;Parent=MS.gene007951.t1 |
| chr3.4 | exon | 71529982 | 71530062 | 71529982 | ID=MS.gene007951.t1.exon13;Parent=MS.gene007951.t1 |
| chr3.4 | CDS | 71529982 | 71530062 | 71529982 | ID=cds.MS.gene007951.t1;Parent=MS.gene007951.t1 |
| Gene Sequence |
| Protein sequence |
