Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009056.t1 | XP_003628725.1 | 97.5 | 641 | 14 | 2 | 1 | 640 | 1 | 640 | 0.00E+00 | 1234.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009056.t1 | Q9SI52 | 68.3 | 666 | 169 | 12 | 1 | 640 | 1 | 650 | 9.9e-248 | 857.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009056.t1 | G7LG87 | 97.5 | 641 | 14 | 2 | 1 | 640 | 1 | 640 | 0.0e+00 | 1234.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene58968 | MS.gene009056 | PPI |
| MS.gene66860 | MS.gene009056 | PPI |
| MS.gene009056 | MS.gene62152 | PPI |
| MS.gene71236 | MS.gene009056 | PPI |
| MS.gene009056 | MS.gene61052 | PPI |
| MS.gene029676 | MS.gene009056 | PPI |
| MS.gene009056 | MS.gene038501 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009056.t1 | MTR_8g066090 | 97.504 | 641 | 14 | 2 | 1 | 640 | 1 | 640 | 0.0 | 1287 |
| MS.gene009056.t1 | MTR_0009s0120 | 77.399 | 646 | 134 | 5 | 1 | 640 | 1 | 640 | 0.0 | 986 |
| MS.gene009056.t1 | MTR_7g017360 | 63.060 | 647 | 217 | 9 | 1 | 640 | 1 | 632 | 0.0 | 766 |
| MS.gene009056.t1 | MTR_5g009120 | 39.144 | 327 | 178 | 6 | 134 | 447 | 238 | 556 | 5.31e-63 | 219 |
| MS.gene009056.t1 | MTR_3g091400 | 41.077 | 297 | 149 | 7 | 146 | 425 | 247 | 534 | 3.02e-62 | 217 |
| MS.gene009056.t1 | MTR_8g027610 | 40.068 | 292 | 145 | 6 | 150 | 425 | 270 | 547 | 8.87e-62 | 216 |
| MS.gene009056.t1 | MTR_8g099565 | 39.697 | 330 | 170 | 9 | 134 | 447 | 251 | 567 | 1.41e-61 | 215 |
| MS.gene009056.t1 | MTR_7g117395 | 38.514 | 296 | 152 | 6 | 146 | 425 | 266 | 547 | 6.55e-58 | 205 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009056.t1 | AT2G03890 | 69.369 | 666 | 162 | 12 | 1 | 640 | 1 | 650 | 0.0 | 894 |
| MS.gene009056.t1 | AT1G26270 | 68.992 | 645 | 180 | 9 | 1 | 640 | 1 | 630 | 0.0 | 873 |
| MS.gene009056.t1 | AT1G13640 | 64.651 | 645 | 188 | 10 | 13 | 640 | 1 | 622 | 0.0 | 805 |
| MS.gene009056.t1 | AT1G13640 | 64.651 | 645 | 188 | 10 | 13 | 640 | 1 | 622 | 0.0 | 805 |
| MS.gene009056.t1 | AT2G03890 | 61.875 | 480 | 143 | 10 | 180 | 640 | 72 | 530 | 0.0 | 548 |
| MS.gene009056.t1 | AT2G03890 | 71.845 | 103 | 20 | 3 | 1 | 96 | 1 | 101 | 3.94e-35 | 140 |
| MS.gene009056.t1 | AT2G40850 | 41.273 | 550 | 249 | 16 | 110 | 640 | 67 | 561 | 2.99e-119 | 366 |
| MS.gene009056.t1 | AT3G56600 | 51.724 | 348 | 149 | 4 | 106 | 444 | 48 | 385 | 3.68e-118 | 363 |
| MS.gene009056.t1 | AT3G56600 | 51.724 | 348 | 149 | 4 | 106 | 444 | 51 | 388 | 5.09e-118 | 362 |
| MS.gene009056.t1 | AT3G56600 | 51.724 | 348 | 149 | 4 | 106 | 444 | 51 | 388 | 5.09e-118 | 362 |
| MS.gene009056.t1 | AT5G24240 | 40.240 | 333 | 169 | 8 | 146 | 465 | 242 | 557 | 2.32e-65 | 225 |
| MS.gene009056.t1 | AT5G24240 | 40.240 | 333 | 169 | 8 | 146 | 465 | 242 | 557 | 2.32e-65 | 225 |
| MS.gene009056.t1 | AT2G46500 | 34.279 | 423 | 219 | 11 | 45 | 425 | 115 | 520 | 9.69e-63 | 218 |
| MS.gene009056.t1 | AT2G46500 | 34.279 | 423 | 219 | 11 | 45 | 425 | 115 | 520 | 9.69e-63 | 218 |
| MS.gene009056.t1 | AT2G46500 | 29.766 | 299 | 152 | 10 | 45 | 301 | 115 | 397 | 2.49e-23 | 103 |
| MS.gene009056.t1 | AT1G27570 | 29.237 | 236 | 131 | 10 | 227 | 443 | 399 | 617 | 3.28e-11 | 67.0 |
| MS.gene009056.t1 | AT1G27570 | 29.237 | 236 | 131 | 10 | 227 | 443 | 390 | 608 | 4.28e-11 | 66.6 |
Find 180 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAATGCTTCTGGTATTTC+TGG | 0.020252 | 8.2:-36485932 | None:intergenic |
| AGATGCTTGGACATTGTTTC+TGG | 0.166094 | 8.2:+36486067 | MS.gene009056:CDS |
| CTCAATGCTCTCGTACAATT+TGG | 0.244008 | 8.2:-36485784 | None:intergenic |
| GAAGAGAGCTCTCTAACTTT+TGG | 0.267353 | 8.2:+36484502 | MS.gene009056:CDS |
| CAATGAATCCACTCAAAGTA+TGG | 0.272331 | 8.2:-36485312 | None:intergenic |
| GTTAGAAAAGTCGGGGCTTT+TGG | 0.306638 | 8.2:+36485231 | MS.gene009056:CDS |
| AAAGCAGATAATGGATGTTA+TGG | 0.313231 | 8.2:+36485960 | MS.gene009056:CDS |
| AGCAGCCTCCTTCAGGAAAA+TGG | 0.316245 | 8.2:-36485472 | None:intergenic |
| CAGAAATACCAGAAGCATTC+AGG | 0.317205 | 8.2:+36485933 | MS.gene009056:CDS |
| GGGTTGGGGAAACTGGCTTC+AGG | 0.327671 | 8.2:+36484923 | MS.gene009056:CDS |
| TCAGTTCGGGTTGGGGAAAC+TGG | 0.331943 | 8.2:+36484916 | MS.gene009056:CDS |
| AGTCATCATCTCACCAATTT+CGG | 0.333656 | 8.2:-36485514 | None:intergenic |
| TATGGGTCCTCCAAAGCTTC+TGG | 0.334039 | 8.2:-36485294 | None:intergenic |
| AAGCAACAGCCATTTGAGTT+TGG | 0.335402 | 8.2:-36484294 | None:intergenic |
| AGCCCACTATTCACTGGAAT+TGG | 0.339986 | 8.2:-36484757 | None:intergenic |
| GCTTTCTTACATCGAAAATC+TGG | 0.339987 | 8.2:+36485368 | MS.gene009056:CDS |
| GCTGCTTATCTACTTGACTA+TGG | 0.343089 | 8.2:+36484952 | MS.gene009056:CDS |
| CTGTTTCTGACCTATAGTTA+TGG | 0.343217 | 8.2:-36486135 | None:intergenic |
| GCTTTGCCTTCCAGAAGCTT+TGG | 0.355876 | 8.2:+36485284 | MS.gene009056:CDS |
| CTCTCCCTGGACTTGGAAAC+GGG | 0.356675 | 8.2:+36485742 | MS.gene009056:CDS |
| GGTCTGTGCCTTGCCGAAAT+TGG | 0.357724 | 8.2:+36485501 | MS.gene009056:CDS |
| ATACGATGCACAGCAGTAAC+AGG | 0.359255 | 8.2:-36485153 | None:intergenic |
| CATAGGCAGCAGCCTCCTTC+AGG | 0.360950 | 8.2:-36485479 | None:intergenic |
| GTATAGGGATATTAGACATT+AGG | 0.362621 | 8.2:+36485172 | MS.gene009056:CDS |
| TGAAACGTTCAGTTCGGGTT+GGG | 0.364791 | 8.2:+36484908 | MS.gene009056:CDS |
| GTTACTGCTGTGCATCGTAT+AGG | 0.375398 | 8.2:+36485156 | MS.gene009056:CDS |
| GCTTTGCCAACAAAACCTTT+TGG | 0.380074 | 8.2:-36484868 | None:intergenic |
| TTACTGCTGTGCATCGTATA+GGG | 0.381515 | 8.2:+36485157 | MS.gene009056:CDS |
| GATTTAATTCCTATTGATCA+TGG | 0.388146 | 8.2:+36485261 | MS.gene009056:CDS |
| CAGGTTTGAAACGTTCAGTT+CGG | 0.388270 | 8.2:+36484902 | MS.gene009056:CDS |
| GTGTGTATTGGGCATGGAAT+TGG | 0.388380 | 8.2:+36484417 | MS.gene009056:CDS |
| CATACTTTGAGTGGATTCAT+TGG | 0.391075 | 8.2:+36485313 | MS.gene009056:CDS |
| ACTGAAACTGGGTGTGTATT+GGG | 0.393077 | 8.2:+36484406 | MS.gene009056:CDS |
| TTGCCTTCCAGAAGCTTTGG+AGG | 0.400314 | 8.2:+36485287 | MS.gene009056:CDS |
| CTCTCGTACAATTTGGAGAA+TGG | 0.400704 | 8.2:-36485777 | None:intergenic |
| TCAGTTTCTCTCCCTGGACT+TGG | 0.403434 | 8.2:+36485735 | MS.gene009056:CDS |
| TCTGTTGATGTCTCGTAAAT+CGG | 0.405325 | 8.2:+36484261 | None:intergenic |
| GAAGGAACTGCCTATGATTC+GGG | 0.405810 | 8.2:+36485419 | MS.gene009056:CDS |
| TCTCTCCCTGGACTTGGAAA+CGG | 0.412632 | 8.2:+36485741 | MS.gene009056:CDS |
| AAGTTCAAGCTTTGTGAAGC+TGG | 0.413490 | 8.2:+36486031 | MS.gene009056:CDS |
| AGTGGTCCTATTGAGATAGT+AGG | 0.413897 | 8.2:+36484661 | MS.gene009056:CDS |
| TCAGGTGGAAAAGCAGATAA+TGG | 0.414362 | 8.2:+36485951 | MS.gene009056:CDS |
| AAGAGGAAATCCATAACTAT+AGG | 0.417543 | 8.2:+36486125 | MS.gene009056:CDS |
| ACAAACAACCTCCAGTTCAC+TGG | 0.419347 | 8.2:-36485565 | None:intergenic |
| GTATTGCTCATCTTCAAAAC+TGG | 0.422923 | 8.2:-36486181 | None:intergenic |
| AAGCAAGCCTCCCGAATCAT+AGG | 0.426402 | 8.2:-36485429 | None:intergenic |
| CGAACTGAACGTTTCAAACC+TGG | 0.427079 | 8.2:-36484901 | None:intergenic |
| AGGCAAAGCCCATGATCAAT+AGG | 0.427118 | 8.2:-36485270 | None:intergenic |
| AGAGAAACTGATCTGGTTAG+AGG | 0.430381 | 8.2:-36485723 | None:intergenic |
| TGAGTGGATTCATTGGCCTC+AGG | 0.430525 | 8.2:+36485320 | MS.gene009056:CDS |
| ATTTGTTAGTTAGAAAAGTC+GGG | 0.431689 | 8.2:+36485223 | MS.gene009056:CDS |
| GGAAGGAACTGCCTATGATT+CGG | 0.436125 | 8.2:+36485418 | MS.gene009056:CDS |
| CTGAAGGAGGCTGCTGCCTA+TGG | 0.439179 | 8.2:+36485480 | MS.gene009056:CDS |
| GATTTCCTCTTGGCAAATGC+CGG | 0.440028 | 8.2:-36486113 | None:intergenic |
| TGCAGAAAGCTGCTGCTCAT+TGG | 0.440402 | 8.2:-36486009 | None:intergenic |
| GATTGCCCTACTATCTCAAT+AGG | 0.443982 | 8.2:-36484667 | None:intergenic |
| CCATTCCCGTTTCCAAGTCC+AGG | 0.445014 | 8.2:-36485747 | None:intergenic |
| AACTGAAACTGGGTGTGTAT+TGG | 0.447347 | 8.2:+36484405 | MS.gene009056:CDS |
| GCAAGTGACTATGGGACATC+TGG | 0.450686 | 8.2:+36485126 | MS.gene009056:CDS |
| TATAGTTATGGATTTCCTCT+TGG | 0.450899 | 8.2:-36486123 | None:intergenic |
| TTTGGATTGTTAGGGGCAAA+AGG | 0.455081 | 8.2:-36484850 | None:intergenic |
| AATGTCAACGATGGAGTCAA+TGG | 0.457911 | 8.2:+36485030 | MS.gene009056:CDS |
| ATTCCAGTGAATAGTGGGCT+TGG | 0.464563 | 8.2:+36484760 | MS.gene009056:CDS |
| GATATAGACTGTGATGTAGC+TGG | 0.466536 | 8.2:+36485666 | MS.gene009056:CDS |
| GGTTGGGGAAACTGGCTTCA+GGG | 0.467085 | 8.2:+36484924 | MS.gene009056:CDS |
| TGAGGAGGAACCCAGTGAAC+TGG | 0.469642 | 8.2:+36485554 | MS.gene009056:CDS |
| AAGCAGATAATGGATGTTAT+GGG | 0.472965 | 8.2:+36485961 | MS.gene009056:CDS |
| ACAATGACCTTAGTTCTGTT+CGG | 0.474164 | 8.2:+36484539 | MS.gene009056:CDS |
| TCTCGTACAATTTGGAGAAT+GGG | 0.475346 | 8.2:-36485776 | None:intergenic |
| CCTGGATATTATGAAGCATA+TGG | 0.475595 | 8.2:+36484696 | MS.gene009056:CDS |
| CATCACAGTCTATATCAAAC+AGG | 0.475913 | 8.2:-36485659 | None:intergenic |
| CAGCCCTGTCCAAACTCAAA+TGG | 0.476458 | 8.2:+36484285 | MS.gene009056:CDS |
| GAAAGCTCATCCTCGGAGAA+TGG | 0.476660 | 8.2:-36485351 | None:intergenic |
| GTACGAGAGCATTGAGGAGG+AGG | 0.476694 | 8.2:+36485791 | MS.gene009056:CDS |
| ATCTCCACAGACTGACTTGA+GGG | 0.478773 | 8.2:+36485626 | MS.gene009056:CDS |
| TGTTATGGGAATACATCATC+TGG | 0.479228 | 8.2:+36485975 | MS.gene009056:CDS |
| TGGATGAACTTCTGTGCATA+AGG | 0.481738 | 8.2:-36484591 | None:intergenic |
| GCTTTATTTCGTAGTCCGCT+TGG | 0.483950 | 8.2:+36484313 | MS.gene009056:CDS |
| ACAGCCATTTGAGTTTGGAC+AGG | 0.485062 | 8.2:-36484289 | None:intergenic |
| TGCTAACCACCTTCTTACTC+TGG | 0.486077 | 8.2:-36485062 | None:intergenic |
| GAAACGTTCAGTTCGGGTTG+GGG | 0.486697 | 8.2:+36484909 | MS.gene009056:CDS |
| ATTGAGGAGGAGGAAGAAGA+AGG | 0.486989 | 8.2:+36485801 | MS.gene009056:CDS |
| TAAGGTTACGCGTAAGAAGA+AGG | 0.487508 | 8.2:-36484573 | None:intergenic |
| GATCCAATTCCAGTGAATAG+TGG | 0.488188 | 8.2:+36484754 | MS.gene009056:CDS |
| AAGGAATATGTTGGCAGAAA+GGG | 0.488308 | 8.2:+36485596 | MS.gene009056:CDS |
| GTTAGAGAGCTCTCTTCAGT+TGG | 0.488845 | 8.2:-36484496 | None:intergenic |
| GGCAAAGCTCTTGGACAACC+AGG | 0.494242 | 8.2:+36484883 | MS.gene009056:CDS |
| ACCAGATCAGTTTCTCTCCC+TGG | 0.495779 | 8.2:+36485729 | MS.gene009056:CDS |
| AATTTGTTAGTTAGAAAAGT+CGG | 0.498110 | 8.2:+36485222 | MS.gene009056:CDS |
| CCTGGACTTGGAAACGGGAA+TGG | 0.499054 | 8.2:+36485747 | MS.gene009056:CDS |
| AGGTTTGAAACGTTCAGTTC+GGG | 0.499842 | 8.2:+36484903 | MS.gene009056:CDS |
| ACTCCATGCTTGTCACCCAC+TGG | 0.501468 | 8.2:+36484613 | MS.gene009056:CDS |
| CTGATATGACTGAAGATGCT+TGG | 0.503078 | 8.2:+36486054 | MS.gene009056:CDS |
| CATTGTGAAGGCAATGCAGA+TGG | 0.505557 | 8.2:+36484726 | MS.gene009056:CDS |
| GAGGAGGAAGAAGAAGGTGA+TGG | 0.508640 | 8.2:+36485807 | MS.gene009056:CDS |
| CAAGGAATATGTTGGCAGAA+AGG | 0.511208 | 8.2:+36485595 | MS.gene009056:CDS |
| AGTAGGGCAATCAAGTAGCC+TGG | 0.511327 | 8.2:+36484678 | MS.gene009056:CDS |
| ATTTCCTCTTGGCAAATGCC+GGG | 0.512706 | 8.2:-36486112 | None:intergenic |
| TTTGCCCCTAACAATCCAAA+AGG | 0.515576 | 8.2:+36484853 | MS.gene009056:CDS |
| ATTTAATTCCTATTGATCAT+GGG | 0.515719 | 8.2:+36485262 | MS.gene009056:CDS |
| CCATATGCTTCATAATATCC+AGG | 0.516408 | 8.2:-36484696 | None:intergenic |
| GTTTCAAGAGCTGCTGTACC+CGG | 0.517286 | 8.2:+36486094 | MS.gene009056:CDS |
| CCTCCAAGCCCACTATTCAC+TGG | 0.518053 | 8.2:-36484763 | None:intergenic |
| TTTAGAAGCAAGGAATATGT+TGG | 0.522762 | 8.2:+36485587 | MS.gene009056:CDS |
| CCAGTGAATAGTGGGCTTGG+AGG | 0.525249 | 8.2:+36484763 | MS.gene009056:CDS |
| TTAGAGAGCTCTCTTCAGTT+GGG | 0.526432 | 8.2:-36484495 | None:intergenic |
| AGGTTGTTTGTTTAGAAGCA+AGG | 0.528616 | 8.2:+36485577 | MS.gene009056:CDS |
| CAGCCATTTGAGTTTGGACA+GGG | 0.529127 | 8.2:-36484288 | None:intergenic |
| ATGTCAACGATGGAGTCAAT+GGG | 0.533411 | 8.2:+36485031 | MS.gene009056:CDS |
| TGCTGCATATCTCGTCCAGT+GGG | 0.534004 | 8.2:-36484628 | None:intergenic |
| AACATCTCACAATCTTGAGC+AGG | 0.536201 | 8.2:-36485393 | None:intergenic |
| GTGGTCCTATTGAGATAGTA+GGG | 0.538139 | 8.2:+36484662 | MS.gene009056:CDS |
| TATCATTCCGAACAGAACTA+AGG | 0.539457 | 8.2:-36484546 | None:intergenic |
| TGGAGGACCCATACTTTGAG+TGG | 0.540905 | 8.2:+36485304 | MS.gene009056:CDS |
| TTGAAACGTTCAGTTCGGGT+TGG | 0.541580 | 8.2:+36484907 | MS.gene009056:CDS |
| TTAGGATTCTTAACACGGAC+AGG | 0.542430 | 8.2:+36485190 | MS.gene009056:CDS |
| GCAAAAGGCTCCTCATCTGT+TGG | 0.543208 | 8.2:-36484835 | None:intergenic |
| TATTACTTCCTGAACAAAAG+AGG | 0.545249 | 8.2:+36484790 | MS.gene009056:CDS |
| CGTCCAGTGGGTGACAAGCA+TGG | 0.548654 | 8.2:-36484616 | None:intergenic |
| CAAACAACCTCCAGTTCACT+GGG | 0.555816 | 8.2:-36485564 | None:intergenic |
| AAATTGGTGAGATGATGACT+AGG | 0.561681 | 8.2:+36485517 | MS.gene009056:CDS |
| ATCCAATTCCAGTGAATAGT+GGG | 0.562056 | 8.2:+36484755 | MS.gene009056:CDS |
| TCCAGGGAGAGAAACTGATC+TGG | 0.563062 | 8.2:-36485730 | None:intergenic |
| CTCAAGATTGTGAGATGTTG+CGG | 0.580351 | 8.2:+36485397 | MS.gene009056:CDS |
| TGAGTGAGTAATCTTCACTA+AGG | 0.580511 | 8.2:-36485001 | None:intergenic |
| ATTGTGAAGGCAATGCAGAT+GGG | 0.584457 | 8.2:+36484727 | MS.gene009056:CDS |
| TTGCTGCATATCTCGTCCAG+TGG | 0.584775 | 8.2:-36484629 | None:intergenic |
| AATGAATCCACTCAAAGTAT+GGG | 0.589378 | 8.2:-36485311 | None:intergenic |
| AACTGGGTGTGTATTGGGCA+TGG | 0.590862 | 8.2:+36484411 | MS.gene009056:CDS |
| CATTCCCGTTTCCAAGTCCA+GGG | 0.591971 | 8.2:-36485746 | None:intergenic |
| AGACTGTGATGTAGCTGGGT+CGG | 0.599868 | 8.2:+36485671 | MS.gene009056:CDS |
| GGAGTTTCGCAGTGGTGAGG+AGG | 0.603373 | 8.2:+36485539 | MS.gene009056:CDS |
| ATATAGACTGTGATGTAGCT+GGG | 0.606383 | 8.2:+36485667 | MS.gene009056:CDS |
| AGACATTAGGATTCTTAACA+CGG | 0.607966 | 8.2:+36485185 | MS.gene009056:CDS |
| CAGAAACAGATACAGAGGCT+TGG | 0.608792 | 8.2:+36486149 | MS.gene009056:CDS |
| GATGTAAGAAAGCTCATCCT+CGG | 0.608887 | 8.2:-36485358 | None:intergenic |
| GGAAAAGTGACAAAACCCTC+AGG | 0.610317 | 8.2:-36485837 | None:intergenic |
| AAGGTTACGCGTAAGAAGAA+GGG | 0.612709 | 8.2:-36484572 | None:intergenic |
| TTGTGAAGGCAATGCAGATG+GGG | 0.617717 | 8.2:+36484728 | MS.gene009056:CDS |
| TATTATGAAGCATATGGTCA+AGG | 0.618282 | 8.2:+36484702 | MS.gene009056:CDS |
| TCATCCCTCAAGTCAGTCTG+TGG | 0.619607 | 8.2:-36485630 | None:intergenic |
| TTCGGCAAGGCACAGACCAT+AGG | 0.620750 | 8.2:-36485496 | None:intergenic |
| TATCTCCACAGACTGACTTG+AGG | 0.623694 | 8.2:+36485625 | MS.gene009056:CDS |
| GTAATCTTCACTAAGGCAGT+CGG | 0.624294 | 8.2:-36484994 | None:intergenic |
| TCAATATTTAATGTCAACGA+TGG | 0.626920 | 8.2:+36485021 | MS.gene009056:CDS |
| ATTCTTAACACGGACAGGCA+CGG | 0.628748 | 8.2:+36485195 | MS.gene009056:CDS |
| TTTGTTAGTTAGAAAAGTCG+GGG | 0.629850 | 8.2:+36485224 | MS.gene009056:CDS |
| CAAATTGTACGAGAGCATTG+AGG | 0.630368 | 8.2:+36485785 | MS.gene009056:CDS |
| TAGGGAGTTTCGCAGTGGTG+AGG | 0.635681 | 8.2:+36485536 | MS.gene009056:CDS |
| TCTCACTCTGAAGATGACAA+TGG | 0.643746 | 8.2:+36485695 | MS.gene009056:CDS |
| AATTGGTGAGATGATGACTA+GGG | 0.645816 | 8.2:+36485518 | MS.gene009056:CDS |
| TACGATGCACAGCAGTAACA+GGG | 0.647251 | 8.2:-36485152 | None:intergenic |
| ATGCTCATACTGTGAAGAGG+AGG | 0.648058 | 8.2:+36484452 | MS.gene009056:CDS |
| GGTCCTCCAAAGCTTCTGGA+AGG | 0.648444 | 8.2:-36485290 | None:intergenic |
| ACAATGCTCATACTGTGAAG+AGG | 0.649410 | 8.2:+36484449 | MS.gene009056:CDS |
| TATGGTCAAGGACATTGTGA+AGG | 0.651183 | 8.2:+36484714 | MS.gene009056:CDS |
| AGATTGTGAGATGTTGCGGA+AGG | 0.652349 | 8.2:+36485401 | MS.gene009056:CDS |
| ATCTTCACTAAGGCAGTCGG+AGG | 0.653479 | 8.2:-36484991 | None:intergenic |
| AAATACCAGAAGCATTCAGG+TGG | 0.655198 | 8.2:+36485936 | MS.gene009056:CDS |
| GGAACTGCCTATGATTCGGG+AGG | 0.655628 | 8.2:+36485422 | MS.gene009056:CDS |
| TCATCTCACCAATTTCGGCA+AGG | 0.656399 | 8.2:-36485509 | None:intergenic |
| TGGGAGGGAGACAATCTAGT+GGG | 0.658573 | 8.2:+36484362 | MS.gene009056:CDS |
| AAACATCCAGAGTAAGAAGG+TGG | 0.658683 | 8.2:+36485056 | MS.gene009056:CDS |
| GGAGGAACCCAGTGAACTGG+AGG | 0.660570 | 8.2:+36485557 | MS.gene009056:CDS |
| GGCTTCAATTCCATTCTCCG+AGG | 0.660851 | 8.2:+36485341 | MS.gene009056:CDS |
| AGTGGGTGACAAGCATGGAG+TGG | 0.664909 | 8.2:-36484611 | None:intergenic |
| TCACTTGCATCAAAATCATG+AGG | 0.674635 | 8.2:-36485111 | None:intergenic |
| TGTACCCGGCATTTGCCAAG+AGG | 0.676826 | 8.2:+36486108 | MS.gene009056:CDS |
| AATAGTGAAACCAACAGATG+AGG | 0.677779 | 8.2:+36484825 | MS.gene009056:CDS |
| GAGGGAGACAATCTAGTGGG+AGG | 0.681797 | 8.2:+36484365 | MS.gene009056:CDS |
| GAGAATGGAATTGAAGCCTG+AGG | 0.682346 | 8.2:-36485336 | None:intergenic |
| ATGGGAGGGAGACAATCTAG+TGG | 0.684867 | 8.2:+36484361 | MS.gene009056:CDS |
| TAGGTCAGAAACAGATACAG+AGG | 0.685042 | 8.2:+36486144 | MS.gene009056:CDS |
| GGTGATGGAGAATATCCTGA+GGG | 0.691024 | 8.2:+36485822 | MS.gene009056:CDS |
| ATTGTACGAGAGCATTGAGG+AGG | 0.691111 | 8.2:+36485788 | MS.gene009056:CDS |
| TCAATGTACTCTCTACCAAG+CGG | 0.695082 | 8.2:-36484328 | None:intergenic |
| AGGTGATGGAGAATATCCTG+AGG | 0.699576 | 8.2:+36485821 | MS.gene009056:CDS |
| ATGACTAGGGAGTTTCGCAG+TGG | 0.731477 | 8.2:+36485531 | MS.gene009056:CDS |
| TCATCTTCAAAACTGGCACG+AGG | 0.736726 | 8.2:-36486174 | None:intergenic |
| CTTAACACGGACAGGCACGG+TGG | 0.765035 | 8.2:+36485198 | MS.gene009056:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAATTCCTATTGATCAT+GGG | + | chr8.2:36485262-36485281 | MS.gene009056:CDS | 20.0% |
| !!! | AATTTGTTAGTTAGAAAAGT+CGG | + | chr8.2:36485222-36485241 | MS.gene009056:CDS | 20.0% |
| ! | GATTTAATTCCTATTGATCA+TGG | + | chr8.2:36485261-36485280 | MS.gene009056:CDS | 25.0% |
| ! | TCAATATTTAATGTCAACGA+TGG | + | chr8.2:36485021-36485040 | MS.gene009056:CDS | 25.0% |
| !! | ATTTGTTAGTTAGAAAAGTC+GGG | + | chr8.2:36485223-36485242 | MS.gene009056:CDS | 25.0% |
| !! | TACATTGAGAAAAAAAGCAT+GGG | + | chr8.2:36484343-36484362 | MS.gene009056:CDS | 25.0% |
| AAGAGGAAATCCATAACTAT+AGG | + | chr8.2:36486125-36486144 | MS.gene009056:CDS | 30.0% | |
| AATGAATCCACTCAAAGTAT+GGG | - | chr8.2:36485314-36485333 | None:intergenic | 30.0% | |
| AGACATTAGGATTCTTAACA+CGG | + | chr8.2:36485185-36485204 | MS.gene009056:CDS | 30.0% | |
| GTACATTGAGAAAAAAAGCA+TGG | + | chr8.2:36484342-36484361 | MS.gene009056:CDS | 30.0% | |
| GTATAGGGATATTAGACATT+AGG | + | chr8.2:36485172-36485191 | MS.gene009056:CDS | 30.0% | |
| TATAGTTATGGATTTCCTCT+TGG | - | chr8.2:36486126-36486145 | None:intergenic | 30.0% | |
| TATTACTTCCTGAACAAAAG+AGG | + | chr8.2:36484790-36484809 | MS.gene009056:CDS | 30.0% | |
| TATTATGAAGCATATGGTCA+AGG | + | chr8.2:36484702-36484721 | MS.gene009056:CDS | 30.0% | |
| TTTAGAAGCAAGGAATATGT+TGG | + | chr8.2:36485587-36485606 | MS.gene009056:CDS | 30.0% | |
| TTTGTTAGTTAGAAAAGTCG+GGG | + | chr8.2:36485224-36485243 | MS.gene009056:CDS | 30.0% | |
| ! | AAAACCTTTTGGATTGTTAG+GGG | - | chr8.2:36484860-36484879 | None:intergenic | 30.0% |
| ! | ACAAAACCTTTTGGATTGTT+AGG | - | chr8.2:36484862-36484881 | None:intergenic | 30.0% |
| ! | CAAAACCTTTTGGATTGTTA+GGG | - | chr8.2:36484861-36484880 | None:intergenic | 30.0% |
| ! | TTTTTGTGCAAACTGAAACT+GGG | + | chr8.2:36484395-36484414 | MS.gene009056:CDS | 30.0% |
| !! | AAAGCAGATAATGGATGTTA+TGG | + | chr8.2:36485960-36485979 | MS.gene009056:CDS | 30.0% |
| !! | AACAATCCAAAAGGTTTTGT+TGG | + | chr8.2:36484862-36484881 | MS.gene009056:CDS | 30.0% |
| !! | AAGCAGATAATGGATGTTAT+GGG | + | chr8.2:36485961-36485980 | MS.gene009056:CDS | 30.0% |
| !! | ATTTTGATGCAAGTGACTAT+GGG | + | chr8.2:36485118-36485137 | MS.gene009056:CDS | 30.0% |
| AAATTGGTGAGATGATGACT+AGG | + | chr8.2:36485517-36485536 | MS.gene009056:CDS | 35.0% | |
| AAGGAATATGTTGGCAGAAA+GGG | + | chr8.2:36485596-36485615 | MS.gene009056:CDS | 35.0% | |
| AATAGTGAAACCAACAGATG+AGG | + | chr8.2:36484825-36484844 | MS.gene009056:CDS | 35.0% | |
| AATTGGTGAGATGATGACTA+GGG | + | chr8.2:36485518-36485537 | MS.gene009056:CDS | 35.0% | |
| AGGTTGTTTGTTTAGAAGCA+AGG | + | chr8.2:36485577-36485596 | MS.gene009056:CDS | 35.0% | |
| AGTCATCATCTCACCAATTT+CGG | - | chr8.2:36485517-36485536 | None:intergenic | 35.0% | |
| ATATAGACTGTGATGTAGCT+GGG | + | chr8.2:36485667-36485686 | MS.gene009056:CDS | 35.0% | |
| ATCCAATTCCAGTGAATAGT+GGG | + | chr8.2:36484755-36484774 | MS.gene009056:CDS | 35.0% | |
| ATGCAGCAAAAAGATAAGAG+TGG | + | chr8.2:36484643-36484662 | MS.gene009056:CDS | 35.0% | |
| CAATGAATCCACTCAAAGTA+TGG | - | chr8.2:36485315-36485334 | None:intergenic | 35.0% | |
| CATCACAGTCTATATCAAAC+AGG | - | chr8.2:36485662-36485681 | None:intergenic | 35.0% | |
| CCATATGCTTCATAATATCC+AGG | - | chr8.2:36484699-36484718 | None:intergenic | 35.0% | |
| CCTGGATATTATGAAGCATA+TGG | + | chr8.2:36484696-36484715 | MS.gene009056:CDS | 35.0% | |
| GAAAAACATCCAGAGTAAGA+AGG | + | chr8.2:36485053-36485072 | MS.gene009056:CDS | 35.0% | |
| GCTTTCTTACATCGAAAATC+TGG | + | chr8.2:36485368-36485387 | MS.gene009056:CDS | 35.0% | |
| TATCATTCCGAACAGAACTA+AGG | - | chr8.2:36484549-36484568 | None:intergenic | 35.0% | |
| TCACTTGCATCAAAATCATG+AGG | - | chr8.2:36485114-36485133 | None:intergenic | 35.0% | |
| TCTCGTACAATTTGGAGAAT+GGG | - | chr8.2:36485779-36485798 | None:intergenic | 35.0% | |
| TGAGTGAGTAATCTTCACTA+AGG | - | chr8.2:36485004-36485023 | None:intergenic | 35.0% | |
| TGTTATGGGAATACATCATC+TGG | + | chr8.2:36485975-36485994 | MS.gene009056:CDS | 35.0% | |
| ! | AAGAGAGCTCTCTAACTTTT+GGG | + | chr8.2:36484503-36484522 | MS.gene009056:CDS | 35.0% |
| ! | ATTGAGAAAAAAAGCATGGG+AGG | + | chr8.2:36484346-36484365 | MS.gene009056:CDS | 35.0% |
| ! | CATACTTTGAGTGGATTCAT+TGG | + | chr8.2:36485313-36485332 | MS.gene009056:CDS | 35.0% |
| ! | GTTTTTGTGCAAACTGAAAC+TGG | + | chr8.2:36484394-36484413 | MS.gene009056:CDS | 35.0% |
| ! | TTGAGAAAAAAAGCATGGGA+GGG | + | chr8.2:36484347-36484366 | MS.gene009056:CDS | 35.0% |
| !! | ACAATGACCTTAGTTCTGTT+CGG | + | chr8.2:36484539-36484558 | MS.gene009056:CDS | 35.0% |
| !! | CTGTTTCTGACCTATAGTTA+TGG | - | chr8.2:36486138-36486157 | None:intergenic | 35.0% |
| !! | GATTTTGATGCAAGTGACTA+TGG | + | chr8.2:36485117-36485136 | MS.gene009056:CDS | 35.0% |
| AAACATCCAGAGTAAGAAGG+TGG | + | chr8.2:36485056-36485075 | MS.gene009056:CDS | 40.0% | |
| AACATCTCACAATCTTGAGC+AGG | - | chr8.2:36485396-36485415 | None:intergenic | 40.0% | |
| AACTGAAACTGGGTGTGTAT+TGG | + | chr8.2:36484405-36484424 | MS.gene009056:CDS | 40.0% | |
| AAGGTTACGCGTAAGAAGAA+GGG | - | chr8.2:36484575-36484594 | None:intergenic | 40.0% | |
| AATGTCAACGATGGAGTCAA+TGG | + | chr8.2:36485030-36485049 | MS.gene009056:CDS | 40.0% | |
| ACAATGCTCATACTGTGAAG+AGG | + | chr8.2:36484449-36484468 | MS.gene009056:CDS | 40.0% | |
| ACTGAAACTGGGTGTGTATT+GGG | + | chr8.2:36484406-36484425 | MS.gene009056:CDS | 40.0% | |
| AGAGAAACTGATCTGGTTAG+AGG | - | chr8.2:36485726-36485745 | None:intergenic | 40.0% | |
| AGATGCTTGGACATTGTTTC+TGG | + | chr8.2:36486067-36486086 | MS.gene009056:CDS | 40.0% | |
| AGTGGTCCTATTGAGATAGT+AGG | + | chr8.2:36484661-36484680 | MS.gene009056:CDS | 40.0% | |
| ATGTCAACGATGGAGTCAAT+GGG | + | chr8.2:36485031-36485050 | MS.gene009056:CDS | 40.0% | |
| ATTGTGAAGGCAATGCAGAT+GGG | + | chr8.2:36484727-36484746 | MS.gene009056:CDS | 40.0% | |
| CAAGGAATATGTTGGCAGAA+AGG | + | chr8.2:36485595-36485614 | MS.gene009056:CDS | 40.0% | |
| CTCAAGATTGTGAGATGTTG+CGG | + | chr8.2:36485397-36485416 | MS.gene009056:CDS | 40.0% | |
| CTCAATGCTCTCGTACAATT+TGG | - | chr8.2:36485787-36485806 | None:intergenic | 40.0% | |
| CTCTCGTACAATTTGGAGAA+TGG | - | chr8.2:36485780-36485799 | None:intergenic | 40.0% | |
| CTGAATGCTTCTGGTATTTC+TGG | - | chr8.2:36485935-36485954 | None:intergenic | 40.0% | |
| CTGATATGACTGAAGATGCT+TGG | + | chr8.2:36486054-36486073 | MS.gene009056:CDS | 40.0% | |
| GATATAGACTGTGATGTAGC+TGG | + | chr8.2:36485666-36485685 | MS.gene009056:CDS | 40.0% | |
| GATCCAATTCCAGTGAATAG+TGG | + | chr8.2:36484754-36484773 | MS.gene009056:CDS | 40.0% | |
| GATGTAAGAAAGCTCATCCT+CGG | - | chr8.2:36485361-36485380 | None:intergenic | 40.0% | |
| GATTGCCCTACTATCTCAAT+AGG | - | chr8.2:36484670-36484689 | None:intergenic | 40.0% | |
| GCTGCTTATCTACTTGACTA+TGG | + | chr8.2:36484952-36484971 | MS.gene009056:CDS | 40.0% | |
| GTAATCTTCACTAAGGCAGT+CGG | - | chr8.2:36484997-36485016 | None:intergenic | 40.0% | |
| GTGGTCCTATTGAGATAGTA+GGG | + | chr8.2:36484662-36484681 | MS.gene009056:CDS | 40.0% | |
| TAAGGTTACGCGTAAGAAGA+AGG | - | chr8.2:36484576-36484595 | None:intergenic | 40.0% | |
| TAGGTCAGAAACAGATACAG+AGG | + | chr8.2:36486144-36486163 | MS.gene009056:CDS | 40.0% | |
| TATGGTCAAGGACATTGTGA+AGG | + | chr8.2:36484714-36484733 | MS.gene009056:CDS | 40.0% | |
| TCAATGTACTCTCTACCAAG+CGG | - | chr8.2:36484331-36484350 | None:intergenic | 40.0% | |
| TCAGGTGGAAAAGCAGATAA+TGG | + | chr8.2:36485951-36485970 | MS.gene009056:CDS | 40.0% | |
| TGGATGAACTTCTGTGCATA+AGG | - | chr8.2:36484594-36484613 | None:intergenic | 40.0% | |
| TTACTGCTGTGCATCGTATA+GGG | + | chr8.2:36485157-36485176 | MS.gene009056:CDS | 40.0% | |
| TTAGAGAGCTCTCTTCAGTT+GGG | - | chr8.2:36484498-36484517 | None:intergenic | 40.0% | |
| TTAGGATTCTTAACACGGAC+AGG | + | chr8.2:36485190-36485209 | MS.gene009056:CDS | 40.0% | |
| TTTGCCCCTAACAATCCAAA+AGG | + | chr8.2:36484853-36484872 | MS.gene009056:CDS | 40.0% | |
| TTTGGATTGTTAGGGGCAAA+AGG | - | chr8.2:36484853-36484872 | None:intergenic | 40.0% | |
| ! | AAGCAACAGCCATTTGAGTT+TGG | - | chr8.2:36484297-36484316 | None:intergenic | 40.0% |
| ! | AAGTTCAAGCTTTGTGAAGC+TGG | + | chr8.2:36486031-36486050 | MS.gene009056:CDS | 40.0% |
| ! | AGAGAGCTCTCTAACTTTTG+GGG | + | chr8.2:36484504-36484523 | MS.gene009056:CDS | 40.0% |
| ! | AGGTTTGAAACGTTCAGTTC+GGG | + | chr8.2:36484903-36484922 | MS.gene009056:CDS | 40.0% |
| ! | CAGGTTTGAAACGTTCAGTT+CGG | + | chr8.2:36484902-36484921 | MS.gene009056:CDS | 40.0% |
| ! | GAAGAGAGCTCTCTAACTTT+TGG | + | chr8.2:36484502-36484521 | MS.gene009056:CDS | 40.0% |
| ! | GCTTTGCCAACAAAACCTTT+TGG | - | chr8.2:36484871-36484890 | None:intergenic | 40.0% |
| ! | TCTCACTCTGAAGATGACAA+TGG | + | chr8.2:36485695-36485714 | MS.gene009056:CDS | 40.0% |
| !! | AAATACCAGAAGCATTCAGG+TGG | + | chr8.2:36485936-36485955 | MS.gene009056:CDS | 40.0% |
| !! | CAAATTGTACGAGAGCATTG+AGG | + | chr8.2:36485785-36485804 | MS.gene009056:CDS | 40.0% |
| !! | CAGAAATACCAGAAGCATTC+AGG | + | chr8.2:36485933-36485952 | MS.gene009056:CDS | 40.0% |
| !!! | ACAGAAAGTTTTGAAACCGC+TGG | - | chr8.2:36485879-36485898 | None:intergenic | 40.0% |
| !!! | AGAAAGTTTTGAAACCGCTG+GGG | - | chr8.2:36485877-36485896 | None:intergenic | 40.0% |
| !!! | CAGAAAGTTTTGAAACCGCT+GGG | - | chr8.2:36485878-36485897 | None:intergenic | 40.0% |
| ACAAACAACCTCCAGTTCAC+TGG | - | chr8.2:36485568-36485587 | None:intergenic | 45.0% | |
| AGATTGTGAGATGTTGCGGA+AGG | + | chr8.2:36485401-36485420 | MS.gene009056:CDS | 45.0% | |
| AGCCCACTATTCACTGGAAT+TGG | - | chr8.2:36484760-36484779 | None:intergenic | 45.0% | |
| AGGCAAAGCCCATGATCAAT+AGG | - | chr8.2:36485273-36485292 | None:intergenic | 45.0% | |
| ATACGATGCACAGCAGTAAC+AGG | - | chr8.2:36485156-36485175 | None:intergenic | 45.0% | |
| ATGCTCATACTGTGAAGAGG+AGG | + | chr8.2:36484452-36484471 | MS.gene009056:CDS | 45.0% | |
| ATTCTTAACACGGACAGGCA+CGG | + | chr8.2:36485195-36485214 | MS.gene009056:CDS | 45.0% | |
| ATTGAGGAGGAGGAAGAAGA+AGG | + | chr8.2:36485801-36485820 | MS.gene009056:CDS | 45.0% | |
| ATTTCCTCTTGGCAAATGCC+GGG | - | chr8.2:36486115-36486134 | None:intergenic | 45.0% | |
| CAAACAACCTCCAGTTCACT+GGG | - | chr8.2:36485567-36485586 | None:intergenic | 45.0% | |
| CAGAAACAGATACAGAGGCT+TGG | + | chr8.2:36486149-36486168 | MS.gene009056:CDS | 45.0% | |
| CATTGTGAAGGCAATGCAGA+TGG | + | chr8.2:36484726-36484745 | MS.gene009056:CDS | 45.0% | |
| CGAACTGAACGTTTCAAACC+TGG | - | chr8.2:36484904-36484923 | None:intergenic | 45.0% | |
| GAAGGAACTGCCTATGATTC+GGG | + | chr8.2:36485419-36485438 | MS.gene009056:CDS | 45.0% | |
| GAGAATGGAATTGAAGCCTG+AGG | - | chr8.2:36485339-36485358 | None:intergenic | 45.0% | |
| GATTTCCTCTTGGCAAATGC+CGG | - | chr8.2:36486116-36486135 | None:intergenic | 45.0% | |
| GGAAAAGTGACAAAACCCTC+AGG | - | chr8.2:36485840-36485859 | None:intergenic | 45.0% | |
| GGAAGGAACTGCCTATGATT+CGG | + | chr8.2:36485418-36485437 | MS.gene009056:CDS | 45.0% | |
| GTGTGTATTGGGCATGGAAT+TGG | + | chr8.2:36484417-36484436 | MS.gene009056:CDS | 45.0% | |
| GTTACTGCTGTGCATCGTAT+AGG | + | chr8.2:36485156-36485175 | MS.gene009056:CDS | 45.0% | |
| GTTAGAGAGCTCTCTTCAGT+TGG | - | chr8.2:36484499-36484518 | None:intergenic | 45.0% | |
| TACGATGCACAGCAGTAACA+GGG | - | chr8.2:36485155-36485174 | None:intergenic | 45.0% | |
| TCATCTCACCAATTTCGGCA+AGG | - | chr8.2:36485512-36485531 | None:intergenic | 45.0% | |
| TCCTCATGAAAAAACCCCAG+CGG | + | chr8.2:36485860-36485879 | MS.gene009056:CDS | 45.0% | |
| TGCTAACCACCTTCTTACTC+TGG | - | chr8.2:36485065-36485084 | None:intergenic | 45.0% | |
| TTGAAACGTTCAGTTCGGGT+TGG | + | chr8.2:36484907-36484926 | MS.gene009056:CDS | 45.0% | |
| TTGTGAAGGCAATGCAGATG+GGG | + | chr8.2:36484728-36484747 | MS.gene009056:CDS | 45.0% | |
| ! | ACAGCCATTTGAGTTTGGAC+AGG | - | chr8.2:36484292-36484311 | None:intergenic | 45.0% |
| ! | ACTCTGCACCATTTTCCTGA+AGG | + | chr8.2:36485464-36485483 | MS.gene009056:CDS | 45.0% |
| ! | CAGCCATTTGAGTTTGGACA+GGG | - | chr8.2:36484291-36484310 | None:intergenic | 45.0% |
| ! | CTTTTCCACCTGAATGCTTC+TGG | - | chr8.2:36485944-36485963 | None:intergenic | 45.0% |
| ! | GTTAGAAAAGTCGGGGCTTT+TGG | + | chr8.2:36485231-36485250 | MS.gene009056:CDS | 45.0% |
| ! | TGAAACGTTCAGTTCGGGTT+GGG | + | chr8.2:36484908-36484927 | MS.gene009056:CDS | 45.0% |
| !! | AGGTGATGGAGAATATCCTG+AGG | + | chr8.2:36485821-36485840 | MS.gene009056:CDS | 45.0% |
| !! | ATCTCCACAGACTGACTTGA+GGG | + | chr8.2:36485626-36485645 | MS.gene009056:CDS | 45.0% |
| !! | ATTCCAGTGAATAGTGGGCT+TGG | + | chr8.2:36484760-36484779 | MS.gene009056:CDS | 45.0% |
| !! | ATTGTACGAGAGCATTGAGG+AGG | + | chr8.2:36485788-36485807 | MS.gene009056:CDS | 45.0% |
| !! | GCTTTATTTCGTAGTCCGCT+TGG | + | chr8.2:36484313-36484332 | MS.gene009056:CDS | 45.0% |
| !! | GGTGATGGAGAATATCCTGA+GGG | + | chr8.2:36485822-36485841 | MS.gene009056:CDS | 45.0% |
| !! | TATCTCCACAGACTGACTTG+AGG | + | chr8.2:36485625-36485644 | MS.gene009056:CDS | 45.0% |
| !!! | GGTTTTGTTGGCAAAGCTCT+TGG | + | chr8.2:36484874-36484893 | MS.gene009056:CDS | 45.0% |
| AACTGGGTGTGTATTGGGCA+TGG | + | chr8.2:36484411-36484430 | MS.gene009056:CDS | 50.0% | |
| AAGCAAGCCTCCCGAATCAT+AGG | - | chr8.2:36485432-36485451 | None:intergenic | 50.0% | |
| ACCAGATCAGTTTCTCTCCC+TGG | + | chr8.2:36485729-36485748 | MS.gene009056:CDS | 50.0% | |
| AGACTGTGATGTAGCTGGGT+CGG | + | chr8.2:36485671-36485690 | MS.gene009056:CDS | 50.0% | |
| AGCAGCCTCCTTCAGGAAAA+TGG | - | chr8.2:36485475-36485494 | None:intergenic | 50.0% | |
| AGTAGGGCAATCAAGTAGCC+TGG | + | chr8.2:36484678-36484697 | MS.gene009056:CDS | 50.0% | |
| ATCTTCACTAAGGCAGTCGG+AGG | - | chr8.2:36484994-36485013 | None:intergenic | 50.0% | |
| ATGACTAGGGAGTTTCGCAG+TGG | + | chr8.2:36485531-36485550 | MS.gene009056:CDS | 50.0% | |
| ATGGGAGGGAGACAATCTAG+TGG | + | chr8.2:36484361-36484380 | MS.gene009056:CDS | 50.0% | |
| CAGCCCTGTCCAAACTCAAA+TGG | + | chr8.2:36484285-36484304 | MS.gene009056:CDS | 50.0% | |
| CATTCCCGTTTCCAAGTCCA+GGG | - | chr8.2:36485749-36485768 | None:intergenic | 50.0% | |
| GAAAGCTCATCCTCGGAGAA+TGG | - | chr8.2:36485354-36485373 | None:intergenic | 50.0% | |
| GAGGAGGAAGAAGAAGGTGA+TGG | + | chr8.2:36485807-36485826 | MS.gene009056:CDS | 50.0% | |
| GCAAAAGGCTCCTCATCTGT+TGG | - | chr8.2:36484838-36484857 | None:intergenic | 50.0% | |
| GCAAGTGACTATGGGACATC+TGG | + | chr8.2:36485126-36485145 | MS.gene009056:CDS | 50.0% | |
| GCTTTGCCTTCCAGAAGCTT+TGG | + | chr8.2:36485284-36485303 | MS.gene009056:CDS | 50.0% | |
| GGCTTCAATTCCATTCTCCG+AGG | + | chr8.2:36485341-36485360 | MS.gene009056:CDS | 50.0% | |
| GTTTCAAGAGCTGCTGTACC+CGG | + | chr8.2:36486094-36486113 | MS.gene009056:CDS | 50.0% | |
| TATGGGTCCTCCAAAGCTTC+TGG | - | chr8.2:36485297-36485316 | None:intergenic | 50.0% | |
| TCAGTTTCTCTCCCTGGACT+TGG | + | chr8.2:36485735-36485754 | MS.gene009056:CDS | 50.0% | |
| TCATCCCTCAAGTCAGTCTG+TGG | - | chr8.2:36485633-36485652 | None:intergenic | 50.0% | |
| TCCAGGGAGAGAAACTGATC+TGG | - | chr8.2:36485733-36485752 | None:intergenic | 50.0% | |
| TCTCTCCCTGGACTTGGAAA+CGG | + | chr8.2:36485741-36485760 | MS.gene009056:CDS | 50.0% | |
| TGCAGAAAGCTGCTGCTCAT+TGG | - | chr8.2:36486012-36486031 | None:intergenic | 50.0% | |
| TGCTGCATATCTCGTCCAGT+GGG | - | chr8.2:36484631-36484650 | None:intergenic | 50.0% | |
| TGGAGGACCCATACTTTGAG+TGG | + | chr8.2:36485304-36485323 | MS.gene009056:CDS | 50.0% | |
| TGGGAGGGAGACAATCTAGT+GGG | + | chr8.2:36484362-36484381 | MS.gene009056:CDS | 50.0% | |
| TTGCTGCATATCTCGTCCAG+TGG | - | chr8.2:36484632-36484651 | None:intergenic | 50.0% | |
| ! | AAAAGTCGGGGCTTTTGGTG+AGG | + | chr8.2:36485236-36485255 | MS.gene009056:CDS | 50.0% |
| ! | CACTCTCGCCTCTTTTGTTC+AGG | - | chr8.2:36484801-36484820 | None:intergenic | 50.0% |
| ! | CTGCACCATTTTCCTGAAGG+AGG | + | chr8.2:36485467-36485486 | MS.gene009056:CDS | 50.0% |
| ! | TGAGTGGATTCATTGGCCTC+AGG | + | chr8.2:36485320-36485339 | MS.gene009056:CDS | 50.0% |
| ! | TTGCCTTCCAGAAGCTTTGG+AGG | + | chr8.2:36485287-36485306 | MS.gene009056:CDS | 50.0% |
| !! | GAAACGTTCAGTTCGGGTTG+GGG | + | chr8.2:36484909-36484928 | MS.gene009056:CDS | 50.0% |
| !!! | ACCGCTGGGGTTTTTTCATG+AGG | - | chr8.2:36485864-36485883 | None:intergenic | 50.0% |
| !!! | GCTGGGGTTTTTTCATGAGG+AGG | - | chr8.2:36485861-36485880 | None:intergenic | 50.0% |
| ACTCCATGCTTGTCACCCAC+TGG | + | chr8.2:36484613-36484632 | MS.gene009056:CDS | 55.0% | |
| AGTGGGTGACAAGCATGGAG+TGG | - | chr8.2:36484614-36484633 | None:intergenic | 55.0% | |
| CCATTCCCGTTTCCAAGTCC+AGG | - | chr8.2:36485750-36485769 | None:intergenic | 55.0% | |
| CCTCCAAGCCCACTATTCAC+TGG | - | chr8.2:36484766-36484785 | None:intergenic | 55.0% | |
| CCTGGACTTGGAAACGGGAA+TGG | + | chr8.2:36485747-36485766 | MS.gene009056:CDS | 55.0% | |
| CTCTCCCTGGACTTGGAAAC+GGG | + | chr8.2:36485742-36485761 | MS.gene009056:CDS | 55.0% | |
| GAGGGAGACAATCTAGTGGG+AGG | + | chr8.2:36484365-36484384 | MS.gene009056:CDS | 55.0% | |
| GGCAAAGCTCTTGGACAACC+AGG | + | chr8.2:36484883-36484902 | MS.gene009056:CDS | 55.0% | |
| GGTCCTCCAAAGCTTCTGGA+AGG | - | chr8.2:36485293-36485312 | None:intergenic | 55.0% | |
| GGTCTGTGCCTTGCCGAAAT+TGG | + | chr8.2:36485501-36485520 | MS.gene009056:CDS | 55.0% | |
| TAGGGAGTTTCGCAGTGGTG+AGG | + | chr8.2:36485536-36485555 | MS.gene009056:CDS | 55.0% | |
| TGAGGAGGAACCCAGTGAAC+TGG | + | chr8.2:36485554-36485573 | MS.gene009056:CDS | 55.0% | |
| TGTACCCGGCATTTGCCAAG+AGG | + | chr8.2:36486108-36486127 | MS.gene009056:CDS | 55.0% | |
| TTCGGCAAGGCACAGACCAT+AGG | - | chr8.2:36485499-36485518 | None:intergenic | 55.0% | |
| ! | GGAACTGCCTATGATTCGGG+AGG | + | chr8.2:36485422-36485441 | MS.gene009056:CDS | 55.0% |
| ! | GGTTGGGGAAACTGGCTTCA+GGG | + | chr8.2:36484924-36484943 | MS.gene009056:CDS | 55.0% |
| !! | CCAGTGAATAGTGGGCTTGG+AGG | + | chr8.2:36484763-36484782 | MS.gene009056:CDS | 55.0% |
| !! | GTACGAGAGCATTGAGGAGG+AGG | + | chr8.2:36485791-36485810 | MS.gene009056:CDS | 55.0% |
| !! | TCAGTTCGGGTTGGGGAAAC+TGG | + | chr8.2:36484916-36484935 | MS.gene009056:CDS | 55.0% |
| CATAGGCAGCAGCCTCCTTC+AGG | - | chr8.2:36485482-36485501 | None:intergenic | 60.0% | |
| CGTCCAGTGGGTGACAAGCA+TGG | - | chr8.2:36484619-36484638 | None:intergenic | 60.0% | |
| CTGAAGGAGGCTGCTGCCTA+TGG | + | chr8.2:36485480-36485499 | MS.gene009056:CDS | 60.0% | |
| CTTAACACGGACAGGCACGG+TGG | + | chr8.2:36485198-36485217 | MS.gene009056:CDS | 60.0% | |
| GGAGGAACCCAGTGAACTGG+AGG | + | chr8.2:36485557-36485576 | MS.gene009056:CDS | 60.0% | |
| GGAGTTTCGCAGTGGTGAGG+AGG | + | chr8.2:36485539-36485558 | MS.gene009056:CDS | 60.0% | |
| ! | AGTCGGGGCTTTTGGTGAGG+TGG | + | chr8.2:36485239-36485258 | MS.gene009056:CDS | 60.0% |
| ! | GGGTTGGGGAAACTGGCTTC+AGG | + | chr8.2:36484923-36484942 | MS.gene009056:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 36484268 | 36486190 | 36484268 | ID=MS.gene009056 |
| chr8.2 | mRNA | 36484268 | 36486190 | 36484268 | ID=MS.gene009056.t1;Parent=MS.gene009056 |
| chr8.2 | exon | 36484268 | 36486190 | 36484268 | ID=MS.gene009056.t1.exon1;Parent=MS.gene009056.t1 |
| chr8.2 | CDS | 36484268 | 36486190 | 36484268 | ID=cds.MS.gene009056.t1;Parent=MS.gene009056.t1 |
| Gene Sequence |
| Protein sequence |
