Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038501.t1 | XP_003628725.1 | 97.3 | 641 | 15 | 2 | 1 | 640 | 1 | 640 | 0.00E+00 | 1232.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038501.t1 | Q9SI52 | 68.2 | 666 | 170 | 12 | 1 | 640 | 1 | 650 | 7.6e-248 | 857.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038501.t1 | G7LG87 | 97.3 | 641 | 15 | 2 | 1 | 640 | 1 | 640 | 0.0e+00 | 1232.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene61052 | MS.gene038501 | PPI |
| MS.gene62152 | MS.gene038501 | PPI |
| MS.gene71236 | MS.gene038501 | PPI |
| MS.gene029676 | MS.gene038501 | PPI |
| MS.gene58968 | MS.gene038501 | PPI |
| MS.gene038501 | MS.gene62152 | PPI |
| MS.gene038501 | MS.gene61052 | PPI |
| MS.gene66860 | MS.gene038501 | PPI |
| MS.gene009056 | MS.gene038501 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038501.t1 | MTR_8g066090 | 97.348 | 641 | 15 | 2 | 1 | 640 | 1 | 640 | 0.0 | 1285 |
| MS.gene038501.t1 | MTR_0009s0120 | 77.245 | 646 | 135 | 5 | 1 | 640 | 1 | 640 | 0.0 | 986 |
| MS.gene038501.t1 | MTR_7g017360 | 63.084 | 642 | 215 | 9 | 6 | 640 | 6 | 632 | 0.0 | 763 |
| MS.gene038501.t1 | MTR_5g009120 | 39.144 | 327 | 178 | 6 | 134 | 447 | 238 | 556 | 5.94e-63 | 219 |
| MS.gene038501.t1 | MTR_3g091400 | 41.077 | 297 | 149 | 7 | 146 | 425 | 247 | 534 | 3.08e-62 | 217 |
| MS.gene038501.t1 | MTR_8g027610 | 40.068 | 292 | 145 | 6 | 150 | 425 | 270 | 547 | 8.17e-62 | 216 |
| MS.gene038501.t1 | MTR_8g099565 | 39.697 | 330 | 170 | 9 | 134 | 447 | 251 | 567 | 1.18e-61 | 216 |
| MS.gene038501.t1 | MTR_7g117395 | 38.514 | 296 | 152 | 6 | 146 | 425 | 266 | 547 | 6.36e-58 | 205 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038501.t1 | AT2G03890 | 69.219 | 666 | 163 | 12 | 1 | 640 | 1 | 650 | 0.0 | 894 |
| MS.gene038501.t1 | AT1G26270 | 68.992 | 645 | 180 | 9 | 1 | 640 | 1 | 630 | 0.0 | 874 |
| MS.gene038501.t1 | AT1G13640 | 64.462 | 650 | 181 | 12 | 13 | 640 | 1 | 622 | 0.0 | 803 |
| MS.gene038501.t1 | AT1G13640 | 64.462 | 650 | 181 | 12 | 13 | 640 | 1 | 622 | 0.0 | 803 |
| MS.gene038501.t1 | AT2G03890 | 61.458 | 480 | 145 | 10 | 180 | 640 | 72 | 530 | 0.0 | 546 |
| MS.gene038501.t1 | AT2G03890 | 72.816 | 103 | 19 | 3 | 1 | 96 | 1 | 101 | 4.96e-36 | 142 |
| MS.gene038501.t1 | AT2G40850 | 41.091 | 550 | 250 | 16 | 110 | 640 | 67 | 561 | 8.92e-119 | 365 |
| MS.gene038501.t1 | AT3G56600 | 51.437 | 348 | 150 | 4 | 106 | 444 | 48 | 385 | 1.69e-117 | 361 |
| MS.gene038501.t1 | AT3G56600 | 51.437 | 348 | 150 | 4 | 106 | 444 | 51 | 388 | 2.08e-117 | 361 |
| MS.gene038501.t1 | AT3G56600 | 51.437 | 348 | 150 | 4 | 106 | 444 | 51 | 388 | 2.08e-117 | 361 |
| MS.gene038501.t1 | AT5G24240 | 40.240 | 333 | 169 | 8 | 146 | 465 | 242 | 557 | 2.01e-65 | 225 |
| MS.gene038501.t1 | AT5G24240 | 40.240 | 333 | 169 | 8 | 146 | 465 | 242 | 557 | 2.01e-65 | 225 |
| MS.gene038501.t1 | AT2G46500 | 34.279 | 423 | 219 | 11 | 45 | 425 | 115 | 520 | 9.12e-63 | 218 |
| MS.gene038501.t1 | AT2G46500 | 34.279 | 423 | 219 | 11 | 45 | 425 | 115 | 520 | 9.12e-63 | 218 |
| MS.gene038501.t1 | AT2G46500 | 29.766 | 299 | 152 | 10 | 45 | 301 | 115 | 397 | 2.27e-23 | 103 |
| MS.gene038501.t1 | AT1G27570 | 29.237 | 236 | 131 | 10 | 227 | 443 | 399 | 617 | 2.71e-11 | 67.0 |
| MS.gene038501.t1 | AT1G27570 | 29.237 | 236 | 131 | 10 | 227 | 443 | 390 | 608 | 3.48e-11 | 66.6 |
Find 181 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAATGCTTCTGGTATTTC+TGG | 0.020252 | 8.4:-36557647 | None:intergenic |
| CTCAATGCTCTCGTACAATT+TGG | 0.244008 | 8.4:-36557499 | None:intergenic |
| GAAGAGAGCTCTCTAACTTT+TGG | 0.267353 | 8.4:+36556217 | MS.gene038501:CDS |
| CAATGAATCCACTCAAAGTA+TGG | 0.272331 | 8.4:-36557027 | None:intergenic |
| AGATGCATGGACAATGTTTC+TGG | 0.285007 | 8.4:+36557782 | MS.gene038501:CDS |
| TCTGTTGATGTCTCGTAAAT+TGG | 0.305651 | 8.4:+36555976 | None:intergenic |
| GTTAGAAAAGTCGGGGCTTT+TGG | 0.306638 | 8.4:+36556946 | MS.gene038501:CDS |
| AAAGCAGATAATGGATGTTA+TGG | 0.313231 | 8.4:+36557675 | MS.gene038501:CDS |
| AGCAGCCTCCTTCAGGAAAA+TGG | 0.316245 | 8.4:-36557187 | None:intergenic |
| CAGAAATACCAGAAGCATTC+AGG | 0.317205 | 8.4:+36557648 | MS.gene038501:CDS |
| GGGTTGGGGAAACTGGCTTC+AGG | 0.327671 | 8.4:+36556638 | MS.gene038501:CDS |
| TCAGTTCGGGTTGGGGAAAC+TGG | 0.331943 | 8.4:+36556631 | MS.gene038501:CDS |
| GGTCTGTGCCTTACCGAAAT+TGG | 0.332818 | 8.4:+36557216 | MS.gene038501:CDS |
| TATGGGTCCTCCAAAGCTTC+TGG | 0.334039 | 8.4:-36557009 | None:intergenic |
| AAGCAACAGCCATTTGAGTT+TGG | 0.335402 | 8.4:-36556009 | None:intergenic |
| AGCCCACTATTCACTGGAAT+TGG | 0.339986 | 8.4:-36556472 | None:intergenic |
| GCTTTCTTACATCGAAAATC+TGG | 0.339987 | 8.4:+36557083 | MS.gene038501:CDS |
| GCTGCTTATCTACTTGACTA+TGG | 0.343089 | 8.4:+36556667 | MS.gene038501:CDS |
| CTGTTTCTGACCTATAGTTA+TGG | 0.343217 | 8.4:-36557850 | None:intergenic |
| AGTCATCATCTCACCAATTT+CGG | 0.345664 | 8.4:-36557229 | None:intergenic |
| GCTTTGCCTTCCAGAAGCTT+TGG | 0.355876 | 8.4:+36556999 | MS.gene038501:CDS |
| CTCTCCCTGGACTTGGAAAC+GGG | 0.356675 | 8.4:+36557457 | MS.gene038501:CDS |
| ATACGATGCACAGCAGTAAC+AGG | 0.359255 | 8.4:-36556868 | None:intergenic |
| CATAGGCAGCAGCCTCCTTC+AGG | 0.360950 | 8.4:-36557194 | None:intergenic |
| GTATAGGGATATTAGACATT+AGG | 0.362621 | 8.4:+36556887 | MS.gene038501:CDS |
| TGAAACGTTCAGTTCGGGTT+GGG | 0.364791 | 8.4:+36556623 | MS.gene038501:CDS |
| GTTACTGCTGTGCATCGTAT+AGG | 0.375398 | 8.4:+36556871 | MS.gene038501:CDS |
| GCTTTGCCAACAAAACCTTT+TGG | 0.380074 | 8.4:-36556583 | None:intergenic |
| TTACTGCTGTGCATCGTATA+GGG | 0.381515 | 8.4:+36556872 | MS.gene038501:CDS |
| GATTTAATTCCTATTGATCA+TGG | 0.388146 | 8.4:+36556976 | MS.gene038501:CDS |
| CAGGTTTGAAACGTTCAGTT+CGG | 0.388270 | 8.4:+36556617 | MS.gene038501:CDS |
| GTGTGTATTGGGCATGGAAT+TGG | 0.388380 | 8.4:+36556132 | MS.gene038501:CDS |
| CATACTTTGAGTGGATTCAT+TGG | 0.391075 | 8.4:+36557028 | MS.gene038501:CDS |
| ACTGAAACTGGGTGTGTATT+GGG | 0.393077 | 8.4:+36556121 | MS.gene038501:CDS |
| TTGCCTTCCAGAAGCTTTGG+AGG | 0.400314 | 8.4:+36557002 | MS.gene038501:CDS |
| CTCTCGTACAATTTGGAGAA+TGG | 0.400704 | 8.4:-36557492 | None:intergenic |
| TCAGTTTCTCTCCCTGGACT+TGG | 0.403434 | 8.4:+36557450 | MS.gene038501:CDS |
| GAAGGAACTGCCTATGATTC+GGG | 0.405810 | 8.4:+36557134 | MS.gene038501:CDS |
| TCTCTCCCTGGACTTGGAAA+CGG | 0.412632 | 8.4:+36557456 | MS.gene038501:CDS |
| AAGTTCAAGCTTTGTGAAGC+TGG | 0.413490 | 8.4:+36557746 | MS.gene038501:CDS |
| AGTGGTCCTATTGAGATAGT+AGG | 0.413897 | 8.4:+36556376 | MS.gene038501:CDS |
| TCAGGTGGAAAAGCAGATAA+TGG | 0.414362 | 8.4:+36557666 | MS.gene038501:CDS |
| AAGAGGAAATCCATAACTAT+AGG | 0.417543 | 8.4:+36557840 | MS.gene038501:CDS |
| ACAAACAACCTCCAGTTCAC+TGG | 0.419347 | 8.4:-36557280 | None:intergenic |
| GTATTGCTCATCTTCAAAAC+TGG | 0.422923 | 8.4:-36557896 | None:intergenic |
| AAGCAAGCCTCCCGAATCAT+AGG | 0.426402 | 8.4:-36557144 | None:intergenic |
| CGAACTGAACGTTTCAAACC+TGG | 0.427079 | 8.4:-36556616 | None:intergenic |
| AGGCAAAGCCCATGATCAAT+AGG | 0.427118 | 8.4:-36556985 | None:intergenic |
| AGAGAAACTGATCTGGTTAG+AGG | 0.430381 | 8.4:-36557438 | None:intergenic |
| TGAGTGGATTCATTGGCCTC+AGG | 0.430525 | 8.4:+36557035 | MS.gene038501:CDS |
| ATTTGTTAGTTAGAAAAGTC+GGG | 0.431689 | 8.4:+36556938 | MS.gene038501:CDS |
| GGAAGGAACTGCCTATGATT+CGG | 0.436125 | 8.4:+36557133 | MS.gene038501:CDS |
| CTGAAGGAGGCTGCTGCCTA+TGG | 0.439179 | 8.4:+36557195 | MS.gene038501:CDS |
| GATTTCCTCTTGGCAAATGC+CGG | 0.440028 | 8.4:-36557828 | None:intergenic |
| TGCAGAAAGCTGCTGCTCAT+TGG | 0.440402 | 8.4:-36557724 | None:intergenic |
| GATTGCCCTACTATCTCAAT+AGG | 0.443982 | 8.4:-36556382 | None:intergenic |
| CCATTCCCGTTTCCAAGTCC+AGG | 0.445014 | 8.4:-36557462 | None:intergenic |
| AACTGAAACTGGGTGTGTAT+TGG | 0.447347 | 8.4:+36556120 | MS.gene038501:CDS |
| GCAAGTGACTATGGGACATC+TGG | 0.450686 | 8.4:+36556841 | MS.gene038501:CDS |
| TATAGTTATGGATTTCCTCT+TGG | 0.450899 | 8.4:-36557838 | None:intergenic |
| TTTGGATTGTTAGGGGCAAA+AGG | 0.455081 | 8.4:-36556565 | None:intergenic |
| AATGTCAACGATGGAGTCAA+TGG | 0.457911 | 8.4:+36556745 | MS.gene038501:CDS |
| ATTCCAGTGAATAGTGGGCT+TGG | 0.464563 | 8.4:+36556475 | MS.gene038501:CDS |
| GATATAGACTGTGATGTAGC+TGG | 0.466536 | 8.4:+36557381 | MS.gene038501:CDS |
| GGTTGGGGAAACTGGCTTCA+GGG | 0.467085 | 8.4:+36556639 | MS.gene038501:CDS |
| TGAGGAGGAACCCAGTGAAC+TGG | 0.469642 | 8.4:+36557269 | MS.gene038501:CDS |
| AAGCAGATAATGGATGTTAT+GGG | 0.472965 | 8.4:+36557676 | MS.gene038501:CDS |
| ACAATGACCTTAGTTCTGTT+CGG | 0.474164 | 8.4:+36556254 | MS.gene038501:CDS |
| TCTCGTACAATTTGGAGAAT+GGG | 0.475346 | 8.4:-36557491 | None:intergenic |
| CCTGGATATTATGAAGCATA+TGG | 0.475595 | 8.4:+36556411 | MS.gene038501:CDS |
| CATCACAGTCTATATCAAAC+AGG | 0.475913 | 8.4:-36557374 | None:intergenic |
| CAGCCCTGTCCAAACTCAAA+TGG | 0.476458 | 8.4:+36556000 | MS.gene038501:CDS |
| GAAAGCTCATCCTCGGAGAA+TGG | 0.476660 | 8.4:-36557066 | None:intergenic |
| GTACGAGAGCATTGAGGAGG+AGG | 0.476694 | 8.4:+36557506 | MS.gene038501:CDS |
| ATCTCCACAGACTGACTTGA+GGG | 0.478773 | 8.4:+36557341 | MS.gene038501:CDS |
| TGTTATGGGAATACATCATC+TGG | 0.479228 | 8.4:+36557690 | MS.gene038501:CDS |
| TGGATGAACTTCTGTGCATA+AGG | 0.481738 | 8.4:-36556306 | None:intergenic |
| GCTTTATTTCGTAGTCCGCT+TGG | 0.483950 | 8.4:+36556028 | MS.gene038501:CDS |
| ACAGCCATTTGAGTTTGGAC+AGG | 0.485062 | 8.4:-36556004 | None:intergenic |
| TGCTAACCACCTTCTTACTC+TGG | 0.486077 | 8.4:-36556777 | None:intergenic |
| GAAACGTTCAGTTCGGGTTG+GGG | 0.486697 | 8.4:+36556624 | MS.gene038501:CDS |
| ATTGAGGAGGAGGAAGAAGA+AGG | 0.486989 | 8.4:+36557516 | MS.gene038501:CDS |
| TAAGGTTACGCGTAAGAAGA+AGG | 0.487508 | 8.4:-36556288 | None:intergenic |
| GATCCAATTCCAGTGAATAG+TGG | 0.488188 | 8.4:+36556469 | MS.gene038501:CDS |
| AAGGAATATGTTGGCAGAAA+GGG | 0.488308 | 8.4:+36557311 | MS.gene038501:CDS |
| GTTAGAGAGCTCTCTTCAGT+TGG | 0.488845 | 8.4:-36556211 | None:intergenic |
| GGCAAAGCTCTTGGACAACC+AGG | 0.494242 | 8.4:+36556598 | MS.gene038501:CDS |
| ACCAGATCAGTTTCTCTCCC+TGG | 0.495779 | 8.4:+36557444 | MS.gene038501:CDS |
| AATTTGTTAGTTAGAAAAGT+CGG | 0.498110 | 8.4:+36556937 | MS.gene038501:CDS |
| CCTGGACTTGGAAACGGGAA+TGG | 0.499054 | 8.4:+36557462 | MS.gene038501:CDS |
| AGGTTTGAAACGTTCAGTTC+GGG | 0.499842 | 8.4:+36556618 | MS.gene038501:CDS |
| ACTCCATGCTTGTCACCCAC+TGG | 0.501468 | 8.4:+36556328 | MS.gene038501:CDS |
| CATTGTGAAGGCAATGCAGA+TGG | 0.505557 | 8.4:+36556441 | MS.gene038501:CDS |
| GAGGAGGAAGAAGAAGGTGA+TGG | 0.508640 | 8.4:+36557522 | MS.gene038501:CDS |
| CAAGGAATATGTTGGCAGAA+AGG | 0.511208 | 8.4:+36557310 | MS.gene038501:CDS |
| AGTAGGGCAATCAAGTAGCC+TGG | 0.511327 | 8.4:+36556393 | MS.gene038501:CDS |
| ATTTCCTCTTGGCAAATGCC+GGG | 0.512706 | 8.4:-36557827 | None:intergenic |
| TTTGCCCCTAACAATCCAAA+AGG | 0.515576 | 8.4:+36556568 | MS.gene038501:CDS |
| ATTTAATTCCTATTGATCAT+GGG | 0.515719 | 8.4:+36556977 | MS.gene038501:CDS |
| CCATATGCTTCATAATATCC+AGG | 0.516408 | 8.4:-36556411 | None:intergenic |
| GTTTCAAGAGCTGCTGTACC+CGG | 0.517286 | 8.4:+36557809 | MS.gene038501:CDS |
| CCTCCAAGCCCACTATTCAC+TGG | 0.518053 | 8.4:-36556478 | None:intergenic |
| TTTAGAAGCAAGGAATATGT+TGG | 0.522762 | 8.4:+36557302 | MS.gene038501:CDS |
| CCAGTGAATAGTGGGCTTGG+AGG | 0.525249 | 8.4:+36556478 | MS.gene038501:CDS |
| TTAGAGAGCTCTCTTCAGTT+GGG | 0.526432 | 8.4:-36556210 | None:intergenic |
| AGGTTGTTTGTTTAGAAGCA+AGG | 0.528616 | 8.4:+36557292 | MS.gene038501:CDS |
| CAGCCATTTGAGTTTGGACA+GGG | 0.529127 | 8.4:-36556003 | None:intergenic |
| ATGTCAACGATGGAGTCAAT+GGG | 0.533411 | 8.4:+36556746 | MS.gene038501:CDS |
| TGCTGCATATCTCGTCCAGT+GGG | 0.534004 | 8.4:-36556343 | None:intergenic |
| AACATCTCACAATCTTGAGC+AGG | 0.536201 | 8.4:-36557108 | None:intergenic |
| GTGGTCCTATTGAGATAGTA+GGG | 0.538139 | 8.4:+36556377 | MS.gene038501:CDS |
| TATCATTCCGAACAGAACTA+AGG | 0.539457 | 8.4:-36556261 | None:intergenic |
| TGGAGGACCCATACTTTGAG+TGG | 0.540905 | 8.4:+36557019 | MS.gene038501:CDS |
| TTGAAACGTTCAGTTCGGGT+TGG | 0.541580 | 8.4:+36556622 | MS.gene038501:CDS |
| GCAAAAGGCTCCTCATCTGT+TGG | 0.543208 | 8.4:-36556550 | None:intergenic |
| TATTACTTCCTGAACAAAAG+AGG | 0.545249 | 8.4:+36556505 | MS.gene038501:CDS |
| CGTCCAGTGGGTGACAAGCA+TGG | 0.548654 | 8.4:-36556331 | None:intergenic |
| CAAACAACCTCCAGTTCACT+GGG | 0.555816 | 8.4:-36557279 | None:intergenic |
| ATCCAATTCCAGTGAATAGT+GGG | 0.562056 | 8.4:+36556470 | MS.gene038501:CDS |
| TTAGGATTCTTAACACGGAC+CGG | 0.562455 | 8.4:+36556905 | MS.gene038501:CDS |
| TCCAGGGAGAGAAACTGATC+TGG | 0.563062 | 8.4:-36557445 | None:intergenic |
| AAATTGGTGAGATGATGACT+AGG | 0.567239 | 8.4:+36557232 | MS.gene038501:CDS |
| CTAACAAATTGCCACCGTGC+CGG | 0.569485 | 8.4:-36556924 | None:intergenic |
| CTCAAGATTGTGAGATGTTG+CGG | 0.580351 | 8.4:+36557112 | MS.gene038501:CDS |
| TGAGTGAGTAATCTTCACTA+AGG | 0.580511 | 8.4:-36556716 | None:intergenic |
| ATTGTGAAGGCAATGCAGAT+GGG | 0.584457 | 8.4:+36556442 | MS.gene038501:CDS |
| TTGCTGCATATCTCGTCCAG+TGG | 0.584775 | 8.4:-36556344 | None:intergenic |
| AATGAATCCACTCAAAGTAT+GGG | 0.589378 | 8.4:-36557026 | None:intergenic |
| TCATCTCACCAATTTCGGTA+AGG | 0.590401 | 8.4:-36557224 | None:intergenic |
| AACTGGGTGTGTATTGGGCA+TGG | 0.590862 | 8.4:+36556126 | MS.gene038501:CDS |
| CATTCCCGTTTCCAAGTCCA+GGG | 0.591971 | 8.4:-36557461 | None:intergenic |
| CTGATATGACTGAAGATGCA+TGG | 0.592888 | 8.4:+36557769 | MS.gene038501:CDS |
| AGACTGTGATGTAGCTGGGT+CGG | 0.599868 | 8.4:+36557386 | MS.gene038501:CDS |
| GGAGTTTCGCAGTGGTGAGG+AGG | 0.603373 | 8.4:+36557254 | MS.gene038501:CDS |
| ATATAGACTGTGATGTAGCT+GGG | 0.606383 | 8.4:+36557382 | MS.gene038501:CDS |
| AGACATTAGGATTCTTAACA+CGG | 0.607966 | 8.4:+36556900 | MS.gene038501:CDS |
| CAGAAACAGATACAGAGGCT+TGG | 0.608792 | 8.4:+36557864 | MS.gene038501:CDS |
| GATGTAAGAAAGCTCATCCT+CGG | 0.608887 | 8.4:-36557073 | None:intergenic |
| GGAAAAGTGACAAAACCCTC+AGG | 0.610317 | 8.4:-36557552 | None:intergenic |
| TTCGGTAAGGCACAGACCAT+AGG | 0.612494 | 8.4:-36557211 | None:intergenic |
| AAGGTTACGCGTAAGAAGAA+GGG | 0.612709 | 8.4:-36556287 | None:intergenic |
| TTGTGAAGGCAATGCAGATG+GGG | 0.617717 | 8.4:+36556443 | MS.gene038501:CDS |
| TATTATGAAGCATATGGTCA+AGG | 0.618282 | 8.4:+36556417 | MS.gene038501:CDS |
| TCATCCCTCAAGTCAGTCTG+TGG | 0.619607 | 8.4:-36557345 | None:intergenic |
| TATCTCCACAGACTGACTTG+AGG | 0.623694 | 8.4:+36557340 | MS.gene038501:CDS |
| GTAATCTTCACTAAGGCAGT+CGG | 0.624294 | 8.4:-36556709 | None:intergenic |
| TCAATATTTAATGTCAACGA+TGG | 0.626920 | 8.4:+36556736 | MS.gene038501:CDS |
| TTTGTTAGTTAGAAAAGTCG+GGG | 0.629850 | 8.4:+36556939 | MS.gene038501:CDS |
| CAAATTGTACGAGAGCATTG+AGG | 0.630368 | 8.4:+36557500 | MS.gene038501:CDS |
| TAGGGAGTTTCGCAGTGGTG+AGG | 0.635681 | 8.4:+36557251 | MS.gene038501:CDS |
| ATTCTTAACACGGACCGGCA+CGG | 0.640386 | 8.4:+36556910 | MS.gene038501:CDS |
| TCTCACTCTGAAGATGACAA+TGG | 0.643746 | 8.4:+36557410 | MS.gene038501:CDS |
| AATTGGTGAGATGATGACTA+GGG | 0.645816 | 8.4:+36557233 | MS.gene038501:CDS |
| TACGATGCACAGCAGTAACA+GGG | 0.647251 | 8.4:-36556867 | None:intergenic |
| ATGCTCATACTGTGAAGAGG+AGG | 0.648058 | 8.4:+36556167 | MS.gene038501:CDS |
| GGTCCTCCAAAGCTTCTGGA+AGG | 0.648444 | 8.4:-36557005 | None:intergenic |
| ACAATGCTCATACTGTGAAG+AGG | 0.649410 | 8.4:+36556164 | MS.gene038501:CDS |
| TATGGTCAAGGACATTGTGA+AGG | 0.651183 | 8.4:+36556429 | MS.gene038501:CDS |
| AGATTGTGAGATGTTGCGGA+AGG | 0.652349 | 8.4:+36557116 | MS.gene038501:CDS |
| ATCTTCACTAAGGCAGTCGG+AGG | 0.653479 | 8.4:-36556706 | None:intergenic |
| AAATACCAGAAGCATTCAGG+TGG | 0.655198 | 8.4:+36557651 | MS.gene038501:CDS |
| GGAACTGCCTATGATTCGGG+AGG | 0.655628 | 8.4:+36557137 | MS.gene038501:CDS |
| TGGGAGGGAGACAATCTAGT+GGG | 0.658573 | 8.4:+36556077 | MS.gene038501:CDS |
| AAACATCCAGAGTAAGAAGG+TGG | 0.658683 | 8.4:+36556771 | MS.gene038501:CDS |
| GGAGGAACCCAGTGAACTGG+AGG | 0.660570 | 8.4:+36557272 | MS.gene038501:CDS |
| GGCTTCAATTCCATTCTCCG+AGG | 0.660851 | 8.4:+36557056 | MS.gene038501:CDS |
| AGTGGGTGACAAGCATGGAG+TGG | 0.664909 | 8.4:-36556326 | None:intergenic |
| TCACTTGCATCAAAATCATG+AGG | 0.674635 | 8.4:-36556826 | None:intergenic |
| TGTACCCGGCATTTGCCAAG+AGG | 0.676826 | 8.4:+36557823 | MS.gene038501:CDS |
| AATAGTGAAACCAACAGATG+AGG | 0.677779 | 8.4:+36556540 | MS.gene038501:CDS |
| GAGGGAGACAATCTAGTGGG+AGG | 0.681797 | 8.4:+36556080 | MS.gene038501:CDS |
| GAGAATGGAATTGAAGCCTG+AGG | 0.682346 | 8.4:-36557051 | None:intergenic |
| ATGGGAGGGAGACAATCTAG+TGG | 0.684867 | 8.4:+36556076 | MS.gene038501:CDS |
| TAGGTCAGAAACAGATACAG+AGG | 0.685042 | 8.4:+36557859 | MS.gene038501:CDS |
| GGTGATGGAGAATATCCTGA+GGG | 0.691024 | 8.4:+36557537 | MS.gene038501:CDS |
| ATTGTACGAGAGCATTGAGG+AGG | 0.691111 | 8.4:+36557503 | MS.gene038501:CDS |
| TCAATGTACTCTCTACCAAG+CGG | 0.695082 | 8.4:-36556043 | None:intergenic |
| AGGTGATGGAGAATATCCTG+AGG | 0.699576 | 8.4:+36557536 | MS.gene038501:CDS |
| CTTAACACGGACCGGCACGG+TGG | 0.701402 | 8.4:+36556913 | MS.gene038501:CDS |
| ATGACTAGGGAGTTTCGCAG+TGG | 0.731477 | 8.4:+36557246 | MS.gene038501:CDS |
| TCATCTTCAAAACTGGCACG+AGG | 0.736726 | 8.4:-36557889 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAATTCCTATTGATCAT+GGG | + | chr8.4:36556977-36556996 | MS.gene038501:CDS | 20.0% |
| !!! | AATTTGTTAGTTAGAAAAGT+CGG | + | chr8.4:36556937-36556956 | MS.gene038501:CDS | 20.0% |
| ! | GATTTAATTCCTATTGATCA+TGG | + | chr8.4:36556976-36556995 | MS.gene038501:CDS | 25.0% |
| ! | TCAATATTTAATGTCAACGA+TGG | + | chr8.4:36556736-36556755 | MS.gene038501:CDS | 25.0% |
| !! | ATTTGTTAGTTAGAAAAGTC+GGG | + | chr8.4:36556938-36556957 | MS.gene038501:CDS | 25.0% |
| !! | TACATTGAGAAAAAAAGCAT+GGG | + | chr8.4:36556058-36556077 | MS.gene038501:CDS | 25.0% |
| AAGAGGAAATCCATAACTAT+AGG | + | chr8.4:36557840-36557859 | MS.gene038501:CDS | 30.0% | |
| AATGAATCCACTCAAAGTAT+GGG | - | chr8.4:36557029-36557048 | None:intergenic | 30.0% | |
| AGACATTAGGATTCTTAACA+CGG | + | chr8.4:36556900-36556919 | MS.gene038501:CDS | 30.0% | |
| GTACATTGAGAAAAAAAGCA+TGG | + | chr8.4:36556057-36556076 | MS.gene038501:CDS | 30.0% | |
| GTATAGGGATATTAGACATT+AGG | + | chr8.4:36556887-36556906 | MS.gene038501:CDS | 30.0% | |
| TATAGTTATGGATTTCCTCT+TGG | - | chr8.4:36557841-36557860 | None:intergenic | 30.0% | |
| TATTACTTCCTGAACAAAAG+AGG | + | chr8.4:36556505-36556524 | MS.gene038501:CDS | 30.0% | |
| TATTATGAAGCATATGGTCA+AGG | + | chr8.4:36556417-36556436 | MS.gene038501:CDS | 30.0% | |
| TTTAGAAGCAAGGAATATGT+TGG | + | chr8.4:36557302-36557321 | MS.gene038501:CDS | 30.0% | |
| TTTGTTAGTTAGAAAAGTCG+GGG | + | chr8.4:36556939-36556958 | MS.gene038501:CDS | 30.0% | |
| ! | AAAACCTTTTGGATTGTTAG+GGG | - | chr8.4:36556575-36556594 | None:intergenic | 30.0% |
| ! | ACAAAACCTTTTGGATTGTT+AGG | - | chr8.4:36556577-36556596 | None:intergenic | 30.0% |
| ! | CAAAACCTTTTGGATTGTTA+GGG | - | chr8.4:36556576-36556595 | None:intergenic | 30.0% |
| ! | TTTTTGTGCAAACTGAAACT+GGG | + | chr8.4:36556110-36556129 | MS.gene038501:CDS | 30.0% |
| !! | AAAGCAGATAATGGATGTTA+TGG | + | chr8.4:36557675-36557694 | MS.gene038501:CDS | 30.0% |
| !! | AACAATCCAAAAGGTTTTGT+TGG | + | chr8.4:36556577-36556596 | MS.gene038501:CDS | 30.0% |
| !! | AAGCAGATAATGGATGTTAT+GGG | + | chr8.4:36557676-36557695 | MS.gene038501:CDS | 30.0% |
| !! | ATTTTGATGCAAGTGACTAT+GGG | + | chr8.4:36556833-36556852 | MS.gene038501:CDS | 30.0% |
| AAATTGGTGAGATGATGACT+AGG | + | chr8.4:36557232-36557251 | MS.gene038501:CDS | 35.0% | |
| AAGGAATATGTTGGCAGAAA+GGG | + | chr8.4:36557311-36557330 | MS.gene038501:CDS | 35.0% | |
| AATAGTGAAACCAACAGATG+AGG | + | chr8.4:36556540-36556559 | MS.gene038501:CDS | 35.0% | |
| AATTGGTGAGATGATGACTA+GGG | + | chr8.4:36557233-36557252 | MS.gene038501:CDS | 35.0% | |
| AGGTTGTTTGTTTAGAAGCA+AGG | + | chr8.4:36557292-36557311 | MS.gene038501:CDS | 35.0% | |
| AGTCATCATCTCACCAATTT+CGG | - | chr8.4:36557232-36557251 | None:intergenic | 35.0% | |
| ATATAGACTGTGATGTAGCT+GGG | + | chr8.4:36557382-36557401 | MS.gene038501:CDS | 35.0% | |
| ATCCAATTCCAGTGAATAGT+GGG | + | chr8.4:36556470-36556489 | MS.gene038501:CDS | 35.0% | |
| ATGCAGCAAAAAGATAAGAG+TGG | + | chr8.4:36556358-36556377 | MS.gene038501:CDS | 35.0% | |
| CAATGAATCCACTCAAAGTA+TGG | - | chr8.4:36557030-36557049 | None:intergenic | 35.0% | |
| CATCACAGTCTATATCAAAC+AGG | - | chr8.4:36557377-36557396 | None:intergenic | 35.0% | |
| CCATATGCTTCATAATATCC+AGG | - | chr8.4:36556414-36556433 | None:intergenic | 35.0% | |
| CCTGGATATTATGAAGCATA+TGG | + | chr8.4:36556411-36556430 | MS.gene038501:CDS | 35.0% | |
| GAAAAACATCCAGAGTAAGA+AGG | + | chr8.4:36556768-36556787 | MS.gene038501:CDS | 35.0% | |
| GCTTTCTTACATCGAAAATC+TGG | + | chr8.4:36557083-36557102 | MS.gene038501:CDS | 35.0% | |
| TATCATTCCGAACAGAACTA+AGG | - | chr8.4:36556264-36556283 | None:intergenic | 35.0% | |
| TCACTTGCATCAAAATCATG+AGG | - | chr8.4:36556829-36556848 | None:intergenic | 35.0% | |
| TCTCGTACAATTTGGAGAAT+GGG | - | chr8.4:36557494-36557513 | None:intergenic | 35.0% | |
| TGAGTGAGTAATCTTCACTA+AGG | - | chr8.4:36556719-36556738 | None:intergenic | 35.0% | |
| TGTTATGGGAATACATCATC+TGG | + | chr8.4:36557690-36557709 | MS.gene038501:CDS | 35.0% | |
| ! | AAGAGAGCTCTCTAACTTTT+GGG | + | chr8.4:36556218-36556237 | MS.gene038501:CDS | 35.0% |
| ! | ATTGAGAAAAAAAGCATGGG+AGG | + | chr8.4:36556061-36556080 | MS.gene038501:CDS | 35.0% |
| ! | CATACTTTGAGTGGATTCAT+TGG | + | chr8.4:36557028-36557047 | MS.gene038501:CDS | 35.0% |
| ! | GTTTTTGTGCAAACTGAAAC+TGG | + | chr8.4:36556109-36556128 | MS.gene038501:CDS | 35.0% |
| ! | TTGAGAAAAAAAGCATGGGA+GGG | + | chr8.4:36556062-36556081 | MS.gene038501:CDS | 35.0% |
| !! | ACAATGACCTTAGTTCTGTT+CGG | + | chr8.4:36556254-36556273 | MS.gene038501:CDS | 35.0% |
| !! | CTGTTTCTGACCTATAGTTA+TGG | - | chr8.4:36557853-36557872 | None:intergenic | 35.0% |
| !! | GATTTTGATGCAAGTGACTA+TGG | + | chr8.4:36556832-36556851 | MS.gene038501:CDS | 35.0% |
| AAACATCCAGAGTAAGAAGG+TGG | + | chr8.4:36556771-36556790 | MS.gene038501:CDS | 40.0% | |
| AACATCTCACAATCTTGAGC+AGG | - | chr8.4:36557111-36557130 | None:intergenic | 40.0% | |
| AACTGAAACTGGGTGTGTAT+TGG | + | chr8.4:36556120-36556139 | MS.gene038501:CDS | 40.0% | |
| AAGGTTACGCGTAAGAAGAA+GGG | - | chr8.4:36556290-36556309 | None:intergenic | 40.0% | |
| AATGTCAACGATGGAGTCAA+TGG | + | chr8.4:36556745-36556764 | MS.gene038501:CDS | 40.0% | |
| ACAATGCTCATACTGTGAAG+AGG | + | chr8.4:36556164-36556183 | MS.gene038501:CDS | 40.0% | |
| ACTGAAACTGGGTGTGTATT+GGG | + | chr8.4:36556121-36556140 | MS.gene038501:CDS | 40.0% | |
| AGAGAAACTGATCTGGTTAG+AGG | - | chr8.4:36557441-36557460 | None:intergenic | 40.0% | |
| AGATGCATGGACAATGTTTC+TGG | + | chr8.4:36557782-36557801 | MS.gene038501:CDS | 40.0% | |
| AGTGGTCCTATTGAGATAGT+AGG | + | chr8.4:36556376-36556395 | MS.gene038501:CDS | 40.0% | |
| ATGTCAACGATGGAGTCAAT+GGG | + | chr8.4:36556746-36556765 | MS.gene038501:CDS | 40.0% | |
| ATTGTGAAGGCAATGCAGAT+GGG | + | chr8.4:36556442-36556461 | MS.gene038501:CDS | 40.0% | |
| CAAGGAATATGTTGGCAGAA+AGG | + | chr8.4:36557310-36557329 | MS.gene038501:CDS | 40.0% | |
| CTCAAGATTGTGAGATGTTG+CGG | + | chr8.4:36557112-36557131 | MS.gene038501:CDS | 40.0% | |
| CTCAATGCTCTCGTACAATT+TGG | - | chr8.4:36557502-36557521 | None:intergenic | 40.0% | |
| CTCTCGTACAATTTGGAGAA+TGG | - | chr8.4:36557495-36557514 | None:intergenic | 40.0% | |
| CTGAATGCTTCTGGTATTTC+TGG | - | chr8.4:36557650-36557669 | None:intergenic | 40.0% | |
| CTGATATGACTGAAGATGCA+TGG | + | chr8.4:36557769-36557788 | MS.gene038501:CDS | 40.0% | |
| GATATAGACTGTGATGTAGC+TGG | + | chr8.4:36557381-36557400 | MS.gene038501:CDS | 40.0% | |
| GATCCAATTCCAGTGAATAG+TGG | + | chr8.4:36556469-36556488 | MS.gene038501:CDS | 40.0% | |
| GATGTAAGAAAGCTCATCCT+CGG | - | chr8.4:36557076-36557095 | None:intergenic | 40.0% | |
| GATTGCCCTACTATCTCAAT+AGG | - | chr8.4:36556385-36556404 | None:intergenic | 40.0% | |
| GCTGCTTATCTACTTGACTA+TGG | + | chr8.4:36556667-36556686 | MS.gene038501:CDS | 40.0% | |
| GTAATCTTCACTAAGGCAGT+CGG | - | chr8.4:36556712-36556731 | None:intergenic | 40.0% | |
| GTGGTCCTATTGAGATAGTA+GGG | + | chr8.4:36556377-36556396 | MS.gene038501:CDS | 40.0% | |
| TAAGGTTACGCGTAAGAAGA+AGG | - | chr8.4:36556291-36556310 | None:intergenic | 40.0% | |
| TAGGTCAGAAACAGATACAG+AGG | + | chr8.4:36557859-36557878 | MS.gene038501:CDS | 40.0% | |
| TATGGTCAAGGACATTGTGA+AGG | + | chr8.4:36556429-36556448 | MS.gene038501:CDS | 40.0% | |
| TCAATGTACTCTCTACCAAG+CGG | - | chr8.4:36556046-36556065 | None:intergenic | 40.0% | |
| TCAGGTGGAAAAGCAGATAA+TGG | + | chr8.4:36557666-36557685 | MS.gene038501:CDS | 40.0% | |
| TCATCTCACCAATTTCGGTA+AGG | - | chr8.4:36557227-36557246 | None:intergenic | 40.0% | |
| TGGATGAACTTCTGTGCATA+AGG | - | chr8.4:36556309-36556328 | None:intergenic | 40.0% | |
| TTACTGCTGTGCATCGTATA+GGG | + | chr8.4:36556872-36556891 | MS.gene038501:CDS | 40.0% | |
| TTAGAGAGCTCTCTTCAGTT+GGG | - | chr8.4:36556213-36556232 | None:intergenic | 40.0% | |
| TTAGGATTCTTAACACGGAC+CGG | + | chr8.4:36556905-36556924 | MS.gene038501:CDS | 40.0% | |
| TTTGCCCCTAACAATCCAAA+AGG | + | chr8.4:36556568-36556587 | MS.gene038501:CDS | 40.0% | |
| TTTGGATTGTTAGGGGCAAA+AGG | - | chr8.4:36556568-36556587 | None:intergenic | 40.0% | |
| ! | AAGCAACAGCCATTTGAGTT+TGG | - | chr8.4:36556012-36556031 | None:intergenic | 40.0% |
| ! | AAGTTCAAGCTTTGTGAAGC+TGG | + | chr8.4:36557746-36557765 | MS.gene038501:CDS | 40.0% |
| ! | AGAGAGCTCTCTAACTTTTG+GGG | + | chr8.4:36556219-36556238 | MS.gene038501:CDS | 40.0% |
| ! | AGGTTTGAAACGTTCAGTTC+GGG | + | chr8.4:36556618-36556637 | MS.gene038501:CDS | 40.0% |
| ! | CAGGTTTGAAACGTTCAGTT+CGG | + | chr8.4:36556617-36556636 | MS.gene038501:CDS | 40.0% |
| ! | GAAGAGAGCTCTCTAACTTT+TGG | + | chr8.4:36556217-36556236 | MS.gene038501:CDS | 40.0% |
| ! | GCTTTGCCAACAAAACCTTT+TGG | - | chr8.4:36556586-36556605 | None:intergenic | 40.0% |
| ! | TCTCACTCTGAAGATGACAA+TGG | + | chr8.4:36557410-36557429 | MS.gene038501:CDS | 40.0% |
| !! | AAATACCAGAAGCATTCAGG+TGG | + | chr8.4:36557651-36557670 | MS.gene038501:CDS | 40.0% |
| !! | CAAATTGTACGAGAGCATTG+AGG | + | chr8.4:36557500-36557519 | MS.gene038501:CDS | 40.0% |
| !! | CAGAAATACCAGAAGCATTC+AGG | + | chr8.4:36557648-36557667 | MS.gene038501:CDS | 40.0% |
| !!! | ACAGAAAGTTTTGAAACCGC+TGG | - | chr8.4:36557594-36557613 | None:intergenic | 40.0% |
| !!! | AGAAAGTTTTGAAACCGCTG+GGG | - | chr8.4:36557592-36557611 | None:intergenic | 40.0% |
| !!! | CAGAAAGTTTTGAAACCGCT+GGG | - | chr8.4:36557593-36557612 | None:intergenic | 40.0% |
| ACAAACAACCTCCAGTTCAC+TGG | - | chr8.4:36557283-36557302 | None:intergenic | 45.0% | |
| AGATTGTGAGATGTTGCGGA+AGG | + | chr8.4:36557116-36557135 | MS.gene038501:CDS | 45.0% | |
| AGCCCACTATTCACTGGAAT+TGG | - | chr8.4:36556475-36556494 | None:intergenic | 45.0% | |
| AGGCAAAGCCCATGATCAAT+AGG | - | chr8.4:36556988-36557007 | None:intergenic | 45.0% | |
| ATACGATGCACAGCAGTAAC+AGG | - | chr8.4:36556871-36556890 | None:intergenic | 45.0% | |
| ATGCTCATACTGTGAAGAGG+AGG | + | chr8.4:36556167-36556186 | MS.gene038501:CDS | 45.0% | |
| ATTGAGGAGGAGGAAGAAGA+AGG | + | chr8.4:36557516-36557535 | MS.gene038501:CDS | 45.0% | |
| ATTTCCTCTTGGCAAATGCC+GGG | - | chr8.4:36557830-36557849 | None:intergenic | 45.0% | |
| CAAACAACCTCCAGTTCACT+GGG | - | chr8.4:36557282-36557301 | None:intergenic | 45.0% | |
| CAGAAACAGATACAGAGGCT+TGG | + | chr8.4:36557864-36557883 | MS.gene038501:CDS | 45.0% | |
| CATTGTGAAGGCAATGCAGA+TGG | + | chr8.4:36556441-36556460 | MS.gene038501:CDS | 45.0% | |
| CGAACTGAACGTTTCAAACC+TGG | - | chr8.4:36556619-36556638 | None:intergenic | 45.0% | |
| GAAGGAACTGCCTATGATTC+GGG | + | chr8.4:36557134-36557153 | MS.gene038501:CDS | 45.0% | |
| GAGAATGGAATTGAAGCCTG+AGG | - | chr8.4:36557054-36557073 | None:intergenic | 45.0% | |
| GATTTCCTCTTGGCAAATGC+CGG | - | chr8.4:36557831-36557850 | None:intergenic | 45.0% | |
| GGAAAAGTGACAAAACCCTC+AGG | - | chr8.4:36557555-36557574 | None:intergenic | 45.0% | |
| GGAAGGAACTGCCTATGATT+CGG | + | chr8.4:36557133-36557152 | MS.gene038501:CDS | 45.0% | |
| GTGTGTATTGGGCATGGAAT+TGG | + | chr8.4:36556132-36556151 | MS.gene038501:CDS | 45.0% | |
| GTTACTGCTGTGCATCGTAT+AGG | + | chr8.4:36556871-36556890 | MS.gene038501:CDS | 45.0% | |
| GTTAGAGAGCTCTCTTCAGT+TGG | - | chr8.4:36556214-36556233 | None:intergenic | 45.0% | |
| TACGATGCACAGCAGTAACA+GGG | - | chr8.4:36556870-36556889 | None:intergenic | 45.0% | |
| TCCTCATGAAAAAACCCCAG+CGG | + | chr8.4:36557575-36557594 | MS.gene038501:CDS | 45.0% | |
| TGCTAACCACCTTCTTACTC+TGG | - | chr8.4:36556780-36556799 | None:intergenic | 45.0% | |
| TTGAAACGTTCAGTTCGGGT+TGG | + | chr8.4:36556622-36556641 | MS.gene038501:CDS | 45.0% | |
| TTGTGAAGGCAATGCAGATG+GGG | + | chr8.4:36556443-36556462 | MS.gene038501:CDS | 45.0% | |
| ! | ACAGCCATTTGAGTTTGGAC+AGG | - | chr8.4:36556007-36556026 | None:intergenic | 45.0% |
| ! | ACTCTGCACCATTTTCCTGA+AGG | + | chr8.4:36557179-36557198 | MS.gene038501:CDS | 45.0% |
| ! | CAGCCATTTGAGTTTGGACA+GGG | - | chr8.4:36556006-36556025 | None:intergenic | 45.0% |
| ! | CTTTTCCACCTGAATGCTTC+TGG | - | chr8.4:36557659-36557678 | None:intergenic | 45.0% |
| ! | GTTAGAAAAGTCGGGGCTTT+TGG | + | chr8.4:36556946-36556965 | MS.gene038501:CDS | 45.0% |
| ! | TGAAACGTTCAGTTCGGGTT+GGG | + | chr8.4:36556623-36556642 | MS.gene038501:CDS | 45.0% |
| !! | AGGTGATGGAGAATATCCTG+AGG | + | chr8.4:36557536-36557555 | MS.gene038501:CDS | 45.0% |
| !! | ATCTCCACAGACTGACTTGA+GGG | + | chr8.4:36557341-36557360 | MS.gene038501:CDS | 45.0% |
| !! | ATTCCAGTGAATAGTGGGCT+TGG | + | chr8.4:36556475-36556494 | MS.gene038501:CDS | 45.0% |
| !! | ATTGTACGAGAGCATTGAGG+AGG | + | chr8.4:36557503-36557522 | MS.gene038501:CDS | 45.0% |
| !! | GCTTTATTTCGTAGTCCGCT+TGG | + | chr8.4:36556028-36556047 | MS.gene038501:CDS | 45.0% |
| !! | GGTGATGGAGAATATCCTGA+GGG | + | chr8.4:36557537-36557556 | MS.gene038501:CDS | 45.0% |
| !! | TATCTCCACAGACTGACTTG+AGG | + | chr8.4:36557340-36557359 | MS.gene038501:CDS | 45.0% |
| !!! | GGTTTTGTTGGCAAAGCTCT+TGG | + | chr8.4:36556589-36556608 | MS.gene038501:CDS | 45.0% |
| AACTGGGTGTGTATTGGGCA+TGG | + | chr8.4:36556126-36556145 | MS.gene038501:CDS | 50.0% | |
| AAGCAAGCCTCCCGAATCAT+AGG | - | chr8.4:36557147-36557166 | None:intergenic | 50.0% | |
| ACCAGATCAGTTTCTCTCCC+TGG | + | chr8.4:36557444-36557463 | MS.gene038501:CDS | 50.0% | |
| AGACTGTGATGTAGCTGGGT+CGG | + | chr8.4:36557386-36557405 | MS.gene038501:CDS | 50.0% | |
| AGCAGCCTCCTTCAGGAAAA+TGG | - | chr8.4:36557190-36557209 | None:intergenic | 50.0% | |
| AGTAGGGCAATCAAGTAGCC+TGG | + | chr8.4:36556393-36556412 | MS.gene038501:CDS | 50.0% | |
| ATCTTCACTAAGGCAGTCGG+AGG | - | chr8.4:36556709-36556728 | None:intergenic | 50.0% | |
| ATGACTAGGGAGTTTCGCAG+TGG | + | chr8.4:36557246-36557265 | MS.gene038501:CDS | 50.0% | |
| ATGGGAGGGAGACAATCTAG+TGG | + | chr8.4:36556076-36556095 | MS.gene038501:CDS | 50.0% | |
| ATTCTTAACACGGACCGGCA+CGG | + | chr8.4:36556910-36556929 | MS.gene038501:CDS | 50.0% | |
| CAGCCCTGTCCAAACTCAAA+TGG | + | chr8.4:36556000-36556019 | MS.gene038501:CDS | 50.0% | |
| CATTCCCGTTTCCAAGTCCA+GGG | - | chr8.4:36557464-36557483 | None:intergenic | 50.0% | |
| CTAACAAATTGCCACCGTGC+CGG | - | chr8.4:36556927-36556946 | None:intergenic | 50.0% | |
| GAAAGCTCATCCTCGGAGAA+TGG | - | chr8.4:36557069-36557088 | None:intergenic | 50.0% | |
| GAGGAGGAAGAAGAAGGTGA+TGG | + | chr8.4:36557522-36557541 | MS.gene038501:CDS | 50.0% | |
| GCAAAAGGCTCCTCATCTGT+TGG | - | chr8.4:36556553-36556572 | None:intergenic | 50.0% | |
| GCAAGTGACTATGGGACATC+TGG | + | chr8.4:36556841-36556860 | MS.gene038501:CDS | 50.0% | |
| GCTTTGCCTTCCAGAAGCTT+TGG | + | chr8.4:36556999-36557018 | MS.gene038501:CDS | 50.0% | |
| GGCTTCAATTCCATTCTCCG+AGG | + | chr8.4:36557056-36557075 | MS.gene038501:CDS | 50.0% | |
| GGTCTGTGCCTTACCGAAAT+TGG | + | chr8.4:36557216-36557235 | MS.gene038501:CDS | 50.0% | |
| GTTTCAAGAGCTGCTGTACC+CGG | + | chr8.4:36557809-36557828 | MS.gene038501:CDS | 50.0% | |
| TATGGGTCCTCCAAAGCTTC+TGG | - | chr8.4:36557012-36557031 | None:intergenic | 50.0% | |
| TCAGTTTCTCTCCCTGGACT+TGG | + | chr8.4:36557450-36557469 | MS.gene038501:CDS | 50.0% | |
| TCATCCCTCAAGTCAGTCTG+TGG | - | chr8.4:36557348-36557367 | None:intergenic | 50.0% | |
| TCCAGGGAGAGAAACTGATC+TGG | - | chr8.4:36557448-36557467 | None:intergenic | 50.0% | |
| TCTCTCCCTGGACTTGGAAA+CGG | + | chr8.4:36557456-36557475 | MS.gene038501:CDS | 50.0% | |
| TGCAGAAAGCTGCTGCTCAT+TGG | - | chr8.4:36557727-36557746 | None:intergenic | 50.0% | |
| TGCTGCATATCTCGTCCAGT+GGG | - | chr8.4:36556346-36556365 | None:intergenic | 50.0% | |
| TGGAGGACCCATACTTTGAG+TGG | + | chr8.4:36557019-36557038 | MS.gene038501:CDS | 50.0% | |
| TGGGAGGGAGACAATCTAGT+GGG | + | chr8.4:36556077-36556096 | MS.gene038501:CDS | 50.0% | |
| TTCGGTAAGGCACAGACCAT+AGG | - | chr8.4:36557214-36557233 | None:intergenic | 50.0% | |
| TTGCTGCATATCTCGTCCAG+TGG | - | chr8.4:36556347-36556366 | None:intergenic | 50.0% | |
| ! | AAAAGTCGGGGCTTTTGGTG+AGG | + | chr8.4:36556951-36556970 | MS.gene038501:CDS | 50.0% |
| ! | CACTCTCGCCTCTTTTGTTC+AGG | - | chr8.4:36556516-36556535 | None:intergenic | 50.0% |
| ! | CTGCACCATTTTCCTGAAGG+AGG | + | chr8.4:36557182-36557201 | MS.gene038501:CDS | 50.0% |
| ! | TGAGTGGATTCATTGGCCTC+AGG | + | chr8.4:36557035-36557054 | MS.gene038501:CDS | 50.0% |
| ! | TTGCCTTCCAGAAGCTTTGG+AGG | + | chr8.4:36557002-36557021 | MS.gene038501:CDS | 50.0% |
| !! | GAAACGTTCAGTTCGGGTTG+GGG | + | chr8.4:36556624-36556643 | MS.gene038501:CDS | 50.0% |
| !!! | ACCGCTGGGGTTTTTTCATG+AGG | - | chr8.4:36557579-36557598 | None:intergenic | 50.0% |
| !!! | GCTGGGGTTTTTTCATGAGG+AGG | - | chr8.4:36557576-36557595 | None:intergenic | 50.0% |
| ACTCCATGCTTGTCACCCAC+TGG | + | chr8.4:36556328-36556347 | MS.gene038501:CDS | 55.0% | |
| AGTGGGTGACAAGCATGGAG+TGG | - | chr8.4:36556329-36556348 | None:intergenic | 55.0% | |
| CCATTCCCGTTTCCAAGTCC+AGG | - | chr8.4:36557465-36557484 | None:intergenic | 55.0% | |
| CCTCCAAGCCCACTATTCAC+TGG | - | chr8.4:36556481-36556500 | None:intergenic | 55.0% | |
| CCTGGACTTGGAAACGGGAA+TGG | + | chr8.4:36557462-36557481 | MS.gene038501:CDS | 55.0% | |
| CTCTCCCTGGACTTGGAAAC+GGG | + | chr8.4:36557457-36557476 | MS.gene038501:CDS | 55.0% | |
| GAGGGAGACAATCTAGTGGG+AGG | + | chr8.4:36556080-36556099 | MS.gene038501:CDS | 55.0% | |
| GGCAAAGCTCTTGGACAACC+AGG | + | chr8.4:36556598-36556617 | MS.gene038501:CDS | 55.0% | |
| GGTCCTCCAAAGCTTCTGGA+AGG | - | chr8.4:36557008-36557027 | None:intergenic | 55.0% | |
| TAGGGAGTTTCGCAGTGGTG+AGG | + | chr8.4:36557251-36557270 | MS.gene038501:CDS | 55.0% | |
| TGAGGAGGAACCCAGTGAAC+TGG | + | chr8.4:36557269-36557288 | MS.gene038501:CDS | 55.0% | |
| TGTACCCGGCATTTGCCAAG+AGG | + | chr8.4:36557823-36557842 | MS.gene038501:CDS | 55.0% | |
| ! | GGAACTGCCTATGATTCGGG+AGG | + | chr8.4:36557137-36557156 | MS.gene038501:CDS | 55.0% |
| ! | GGTTGGGGAAACTGGCTTCA+GGG | + | chr8.4:36556639-36556658 | MS.gene038501:CDS | 55.0% |
| !! | CCAGTGAATAGTGGGCTTGG+AGG | + | chr8.4:36556478-36556497 | MS.gene038501:CDS | 55.0% |
| !! | GTACGAGAGCATTGAGGAGG+AGG | + | chr8.4:36557506-36557525 | MS.gene038501:CDS | 55.0% |
| !! | TCAGTTCGGGTTGGGGAAAC+TGG | + | chr8.4:36556631-36556650 | MS.gene038501:CDS | 55.0% |
| CATAGGCAGCAGCCTCCTTC+AGG | - | chr8.4:36557197-36557216 | None:intergenic | 60.0% | |
| CGTCCAGTGGGTGACAAGCA+TGG | - | chr8.4:36556334-36556353 | None:intergenic | 60.0% | |
| CTGAAGGAGGCTGCTGCCTA+TGG | + | chr8.4:36557195-36557214 | MS.gene038501:CDS | 60.0% | |
| GGAGGAACCCAGTGAACTGG+AGG | + | chr8.4:36557272-36557291 | MS.gene038501:CDS | 60.0% | |
| GGAGTTTCGCAGTGGTGAGG+AGG | + | chr8.4:36557254-36557273 | MS.gene038501:CDS | 60.0% | |
| ! | AGTCGGGGCTTTTGGTGAGG+TGG | + | chr8.4:36556954-36556973 | MS.gene038501:CDS | 60.0% |
| ! | GGGTTGGGGAAACTGGCTTC+AGG | + | chr8.4:36556638-36556657 | MS.gene038501:CDS | 60.0% |
| CTTAACACGGACCGGCACGG+TGG | + | chr8.4:36556913-36556932 | MS.gene038501:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 36555983 | 36557905 | 36555983 | ID=MS.gene038501 |
| chr8.4 | mRNA | 36555983 | 36557905 | 36555983 | ID=MS.gene038501.t1;Parent=MS.gene038501 |
| chr8.4 | exon | 36555983 | 36557905 | 36555983 | ID=MS.gene038501.t1.exon1;Parent=MS.gene038501.t1 |
| chr8.4 | CDS | 36555983 | 36557905 | 36555983 | ID=cds.MS.gene038501.t1;Parent=MS.gene038501.t1 |
| Gene Sequence |
| Protein sequence |
