Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58968.t1 | XP_013443501.1 | 97.7 | 640 | 15 | 0 | 1 | 640 | 1 | 640 | 0.00E+00 | 1231.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58968.t1 | Q9SI52 | 69.0 | 665 | 166 | 11 | 1 | 640 | 1 | 650 | 1.9e-243 | 843.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58968.t1 | A0A072TK16 | 97.7 | 640 | 15 | 0 | 1 | 640 | 1 | 640 | 0.0e+00 | 1231.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055339 | MS.gene58968 | 0.841574 | 4.37E-58 | -1.69E-46 |
| MS.gene05894 | MS.gene58968 | 0.80255 | 5.32E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene58968 | MS.gene62152 | PPI |
| MS.gene58968 | MS.gene009056 | PPI |
| MS.gene58968 | MS.gene61052 | PPI |
| MS.gene58968 | MS.gene029676 | PPI |
| MS.gene58968 | MS.gene038501 | PPI |
| MS.gene58968 | MS.gene71236 | PPI |
| MS.gene58968 | MS.gene66860 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58968.t1 | MTR_0009s0120 | 98.125 | 640 | 12 | 0 | 1 | 640 | 1 | 640 | 0.0 | 1299 |
| MS.gene58968.t1 | MTR_8g066090 | 77.399 | 646 | 134 | 4 | 1 | 640 | 1 | 640 | 0.0 | 988 |
| MS.gene58968.t1 | MTR_7g017360 | 65.625 | 608 | 199 | 5 | 36 | 640 | 32 | 632 | 0.0 | 780 |
| MS.gene58968.t1 | MTR_5g009120 | 40.317 | 315 | 163 | 6 | 152 | 453 | 254 | 556 | 1.83e-61 | 215 |
| MS.gene58968.t1 | MTR_8g099565 | 42.069 | 290 | 138 | 8 | 158 | 431 | 273 | 548 | 3.24e-61 | 214 |
| MS.gene58968.t1 | MTR_3g091400 | 39.535 | 301 | 152 | 7 | 148 | 431 | 247 | 534 | 1.17e-58 | 207 |
| MS.gene58968.t1 | MTR_8g027610 | 39.731 | 297 | 141 | 8 | 155 | 431 | 269 | 547 | 2.55e-58 | 206 |
| MS.gene58968.t1 | MTR_7g117395 | 41.135 | 282 | 132 | 7 | 166 | 431 | 284 | 547 | 2.71e-56 | 201 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58968.t1 | AT2G03890 | 67.970 | 665 | 173 | 11 | 1 | 640 | 1 | 650 | 0.0 | 870 |
| MS.gene58968.t1 | AT1G26270 | 68.062 | 645 | 186 | 10 | 1 | 640 | 1 | 630 | 0.0 | 857 |
| MS.gene58968.t1 | AT1G13640 | 66.094 | 640 | 187 | 9 | 13 | 640 | 1 | 622 | 0.0 | 819 |
| MS.gene58968.t1 | AT1G13640 | 66.094 | 640 | 187 | 9 | 13 | 640 | 1 | 622 | 0.0 | 819 |
| MS.gene58968.t1 | AT2G03890 | 62.288 | 472 | 142 | 9 | 187 | 640 | 77 | 530 | 0.0 | 543 |
| MS.gene58968.t1 | AT2G03890 | 66.667 | 105 | 24 | 3 | 1 | 98 | 1 | 101 | 4.72e-33 | 134 |
| MS.gene58968.t1 | AT3G56600 | 40.687 | 553 | 241 | 11 | 108 | 640 | 48 | 533 | 2.45e-121 | 371 |
| MS.gene58968.t1 | AT3G56600 | 40.687 | 553 | 241 | 11 | 108 | 640 | 51 | 536 | 3.13e-121 | 370 |
| MS.gene58968.t1 | AT3G56600 | 40.687 | 553 | 241 | 11 | 108 | 640 | 51 | 536 | 3.13e-121 | 370 |
| MS.gene58968.t1 | AT2G40850 | 42.144 | 541 | 255 | 16 | 112 | 640 | 67 | 561 | 6.82e-119 | 365 |
| MS.gene58968.t1 | AT5G24240 | 39.763 | 337 | 169 | 8 | 148 | 471 | 242 | 557 | 1.90e-64 | 223 |
| MS.gene58968.t1 | AT5G24240 | 39.763 | 337 | 169 | 8 | 148 | 471 | 242 | 557 | 1.90e-64 | 223 |
| MS.gene58968.t1 | AT2G46500 | 35.363 | 427 | 213 | 11 | 47 | 431 | 115 | 520 | 7.11e-64 | 221 |
| MS.gene58968.t1 | AT2G46500 | 35.363 | 427 | 213 | 11 | 47 | 431 | 115 | 520 | 7.11e-64 | 221 |
| MS.gene58968.t1 | AT2G46500 | 31.104 | 299 | 148 | 10 | 47 | 303 | 115 | 397 | 2.38e-23 | 103 |
Find 185 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATGATTGGACATTATTTC+TGG | 0.170465 | 5.2:-39514976 | MS.gene58968:CDS |
| TGAAAAGTTTCTCTGATTAA+AGG | 0.184139 | 5.2:+39515302 | None:intergenic |
| CTCAAAGAGGCTGCTGAATT+TGG | 0.201939 | 5.2:-39515545 | MS.gene58968:CDS |
| TAAGGATCCTCCAAAGTTTC+TGG | 0.229441 | 5.2:+39515731 | None:intergenic |
| CTCAATGCTCTCATCCAATT+TGG | 0.245000 | 5.2:+39515241 | None:intergenic |
| GGATCCTCCATTGCCATCTT+TGG | 0.251549 | 5.2:+39515323 | None:intergenic |
| ATCGATCCGGTTCCTGTTAA+TGG | 0.258185 | 5.2:-39516286 | MS.gene58968:CDS |
| GGTCTTTGTCTTGCTGAAAT+TGG | 0.272049 | 5.2:-39515524 | MS.gene58968:CDS |
| GTATAGGGATATTAGATATT+AGG | 0.275793 | 5.2:-39515865 | MS.gene58968:CDS |
| AGGTCAATGGGAATTGTTTC+CGG | 0.281282 | 5.2:-39515994 | MS.gene58968:CDS |
| TCATCACTTCAACTGCCATC+TGG | 0.288451 | 5.2:+39516743 | None:intergenic |
| GAAGAATCTCCTCAGGAATT+TGG | 0.298437 | 5.2:-39515197 | MS.gene58968:CDS |
| CTTTACCAACAAAACCTTTA+GGG | 0.300434 | 5.2:+39516170 | None:intergenic |
| GAAGAGAGTTCTCTTACTTT+TGG | 0.300456 | 5.2:-39516535 | MS.gene58968:CDS |
| ATTACGAAGCTTATGCTTGC+AGG | 0.312460 | 5.2:+39515017 | None:intergenic |
| GCCAAGCACACAACCCTTAT+CGG | 0.314484 | 5.2:+39516630 | None:intergenic |
| CAATGAATCCACTCAAAATA+AGG | 0.318986 | 5.2:+39515713 | None:intergenic |
| GGAGGTTGCGGCTTATCTTC+TGG | 0.319111 | 5.2:-39516092 | MS.gene58968:CDS |
| GCGCAGCCCACTCTCCAAAT+TGG | 0.319224 | 5.2:-39515255 | MS.gene58968:CDS |
| GAGTGGTCCTATTGAAATAT+TGG | 0.322225 | 5.2:-39516377 | MS.gene58968:CDS |
| TTTCAGCATGCACTTGGAAA+TGG | 0.327037 | 5.2:-39515284 | MS.gene58968:CDS |
| ACAAAACCTTTAGGGTTATT+AGG | 0.334352 | 5.2:+39516178 | None:intergenic |
| GCTTTACCAACAAAACCTTT+AGG | 0.335363 | 5.2:+39516169 | None:intergenic |
| ACTCCTTGTTTGTCCCCAAC+TGG | 0.339211 | 5.2:-39516424 | MS.gene58968:CDS |
| AGTGGTCCTATTGAAATATT+GGG | 0.341072 | 5.2:-39516376 | MS.gene58968:CDS |
| GCTGGATATCCCTCCCAGTT+GGG | 0.353656 | 5.2:+39516410 | None:intergenic |
| GGTGATGGCATTGGAACTTT+TGG | 0.354061 | 5.2:-39515794 | MS.gene58968:CDS |
| TCATGGTACGTCGAGCTTCC+CGG | 0.361544 | 5.2:-39515903 | MS.gene58968:CDS |
| GATTGCCCCAATATTTCAAT+AGG | 0.361720 | 5.2:+39516370 | None:intergenic |
| GACCACTCTTATCCCTTTGC+TGG | 0.361794 | 5.2:+39516392 | None:intergenic |
| GTTGCTTCGGTGCATCGTAT+AGG | 0.369514 | 5.2:-39515881 | MS.gene58968:CDS |
| ACTTGAGGTTGTTTGTTTAG+AGG | 0.380994 | 5.2:-39515453 | MS.gene58968:CDS |
| CCTCCAAGCCCACCATTAAC+AGG | 0.381577 | 5.2:+39516274 | None:intergenic |
| ATATTACTCAACTTCAAAAC+TGG | 0.381955 | 5.2:+39514862 | None:intergenic |
| GTTCCTGTTAATGGTGGGCT+TGG | 0.393474 | 5.2:-39516277 | MS.gene58968:CDS |
| CCTGTTAATGGTGGGCTTGG+AGG | 0.395549 | 5.2:-39516274 | MS.gene58968:CDS |
| TTGCTTCGGTGCATCGTATA+GGG | 0.398997 | 5.2:-39515880 | MS.gene58968:CDS |
| TCCTCCCAGCAGGTTGCCTC+TGG | 0.399427 | 5.2:+39516671 | None:intergenic |
| ACTGCCATCTGGGTCTGAAC+TGG | 0.399575 | 5.2:+39516754 | None:intergenic |
| AACTTGTTAGTTAGAAAAGT+TGG | 0.401570 | 5.2:-39515815 | MS.gene58968:CDS |
| TCTGGAGGAAAACCGGATAA+TGG | 0.407097 | 5.2:-39515083 | MS.gene58968:CDS |
| AATGGCTACTTTACATCATC+TGG | 0.408753 | 5.2:-39515065 | MS.gene58968:CDS |
| CGGGGTTGAAACGATCTGTT+CGG | 0.410422 | 5.2:-39516135 | MS.gene58968:CDS |
| TTGTGTGCTTGGCATGGAAT+TGG | 0.413437 | 5.2:-39516620 | MS.gene58968:CDS |
| TTCAGCATGCACTTGGAAAT+GGG | 0.413808 | 5.2:-39515283 | MS.gene58968:CDS |
| ACCGATAAGGGTTGTGTGCT+TGG | 0.414023 | 5.2:-39516631 | MS.gene58968:CDS |
| CAGATATGACCGAGGATGAT+TGG | 0.414158 | 5.2:-39514989 | MS.gene58968:CDS |
| TGATGACTCGCGAGTTCTAC+AGG | 0.416969 | 5.2:-39515496 | MS.gene58968:CDS |
| CCTTGATGTGATGAAACTTA+TGG | 0.418417 | 5.2:-39516341 | MS.gene58968:CDS |
| GTCGAGCTTCCCGGTTGCTT+CGG | 0.419259 | 5.2:-39515894 | MS.gene58968:CDS |
| TTTGATATTGATTGCGATGA+AGG | 0.420722 | 5.2:-39515362 | MS.gene58968:CDS |
| AGACAAGCCTCTCGAATCAT+TGG | 0.420945 | 5.2:+39515596 | None:intergenic |
| CATCACTTCAACTGCCATCT+GGG | 0.423030 | 5.2:+39516744 | None:intergenic |
| AGACAGAGCCCATGATCAAT+AGG | 0.433939 | 5.2:+39515755 | None:intergenic |
| TGCTGGATATCCCTCCCAGT+TGG | 0.434243 | 5.2:+39516409 | None:intergenic |
| ATACGATGCACCGAAGCAAC+CGG | 0.435535 | 5.2:+39515884 | None:intergenic |
| TGAGAGCATTGAGGAGGAAG+AGG | 0.438129 | 5.2:-39515231 | MS.gene58968:CDS |
| GCTTGCAGGCAGCTGCTCAT+TGG | 0.438654 | 5.2:+39515031 | None:intergenic |
| GTTTCAAGAGTTGCTGTATC+CGG | 0.439521 | 5.2:-39514949 | MS.gene58968:CDS |
| AGCATCTCGCAGTCATGAGC+AGG | 0.441218 | 5.2:+39515632 | None:intergenic |
| GCTGCTCATTGGCACTCCTA+TGG | 0.441500 | 5.2:+39515042 | None:intergenic |
| AGCCCACCATTAACAGGAAC+CGG | 0.441803 | 5.2:+39516280 | None:intergenic |
| GAGCTAATTCCTATTGATCA+TGG | 0.442901 | 5.2:-39515764 | MS.gene58968:CDS |
| GTAAGAGAACTCTCTTCAAC+AGG | 0.443142 | 5.2:+39516541 | None:intergenic |
| TGCTAACAAGTCTCTTTCTC+CGG | 0.444378 | 5.2:+39515975 | None:intergenic |
| GGGGTTGAAACGATCTGTTC+GGG | 0.447342 | 5.2:-39516134 | MS.gene58968:CDS |
| GATGTAAAGTAGCCATTATC+CGG | 0.447873 | 5.2:+39515071 | None:intergenic |
| AATGTCAATGATGAGGTCAA+TGG | 0.447940 | 5.2:-39516007 | MS.gene58968:CDS |
| GCACACAACCCTTATCGGTT+TGG | 0.448229 | 5.2:+39516635 | None:intergenic |
| CTGCCTCTGCTTCTGTCCTA+AGG | 0.450532 | 5.2:+39514902 | None:intergenic |
| ATTGTGAAGGCGATTAAGAT+GGG | 0.451455 | 5.2:-39516310 | MS.gene58968:CDS |
| AGAAAAGTTGGTGATGGCAT+TGG | 0.451482 | 5.2:-39515803 | MS.gene58968:CDS |
| GCTCTGTCTGCCAGAAACTT+TGG | 0.451851 | 5.2:-39515741 | MS.gene58968:CDS |
| AAGGAGGATGTTGGCAGAGA+GGG | 0.455917 | 5.2:-39515429 | MS.gene58968:CDS |
| AAGAGGAAATTTATAACCTT+AGG | 0.457271 | 5.2:-39514918 | MS.gene58968:CDS |
| GAAACACTCTGGAGGAAAAC+CGG | 0.459546 | 5.2:-39515090 | MS.gene58968:CDS |
| CGTGTTCGTCCAAACCGATA+AGG | 0.461183 | 5.2:-39516644 | MS.gene58968:CDS |
| TTAGGGTTATTAGGCGCAAA+AGG | 0.466929 | 5.2:+39516187 | None:intergenic |
| TCGTCTCCCACCTCAGTCCT+TGG | 0.470819 | 5.2:+39515395 | None:intergenic |
| TGGTAAAGCTCTTGGACAGC+CGG | 0.473910 | 5.2:-39516155 | MS.gene58968:CDS |
| CTCCTTGTTTGTCCCCAACT+GGG | 0.474424 | 5.2:-39516423 | MS.gene58968:CDS |
| ATGTCAATGATGAGGTCAAT+GGG | 0.475286 | 5.2:-39516006 | MS.gene58968:CDS |
| TTCAGTGATACAGTAATCTC+CGG | 0.475464 | 5.2:+39515140 | None:intergenic |
| GGTAAAGCTCTTGGACAGCC+GGG | 0.482186 | 5.2:-39516154 | MS.gene58968:CDS |
| TCTGTTCGGGTTGGAGAGAC+GGG | 0.484443 | 5.2:-39516121 | MS.gene58968:CDS |
| TAAGGTTATAAATTTCCTCT+TGG | 0.486073 | 5.2:+39514920 | None:intergenic |
| GTGTTCGTCCAAACCGATAA+GGG | 0.486721 | 5.2:-39516643 | MS.gene58968:CDS |
| ACAATGTACATACTGTTAAG+AGG | 0.489555 | 5.2:-39516588 | MS.gene58968:CDS |
| TATTGTGAAGGCGATTAAGA+TGG | 0.490069 | 5.2:-39516311 | MS.gene58968:CDS |
| AATTTCCTCTTGGCGAATGC+CGG | 0.490852 | 5.2:+39514930 | None:intergenic |
| CAAAGCCAGAGGCAACCTGC+TGG | 0.492330 | 5.2:-39516676 | MS.gene58968:CDS |
| ATCTGTTCGGGTTGGAGAGA+CGG | 0.492848 | 5.2:-39516122 | MS.gene58968:CDS |
| GATTAAGATGGGGATCGATC+CGG | 0.496887 | 5.2:-39516299 | MS.gene58968:CDS |
| AAGTGATGAGGAGTCCTCTT+GGG | 0.497100 | 5.2:-39516729 | MS.gene58968:CDS |
| CAAACAACCTCAAGTTCACT+TGG | 0.500036 | 5.2:+39515461 | None:intergenic |
| TAATGTGCCTCCTACTGCCT+TGG | 0.500216 | 5.2:-39516053 | MS.gene58968:CDS |
| CTCTTGGGAGGGAGTATCAT+GGG | 0.505591 | 5.2:-39516714 | MS.gene58968:CDS |
| GAAGTGATGAGGAGTCCTCT+TGG | 0.506034 | 5.2:-39516730 | MS.gene58968:CDS |
| TTTGCGCCTAATAACCCTAA+AGG | 0.512201 | 5.2:-39516184 | MS.gene58968:CDS |
| AGAGGCTTGTCTCAGAGTGC+TGG | 0.512571 | 5.2:-39515585 | MS.gene58968:CDS |
| TTGTTTGTCCCCAACTGGGA+GGG | 0.513060 | 5.2:-39516419 | MS.gene58968:CDS |
| AGGTTGTTTGTTTAGAGGCA+AGG | 0.513545 | 5.2:-39515448 | MS.gene58968:CDS |
| ATCAGATTCCACTCCAAAGA+TGG | 0.519649 | 5.2:-39515336 | MS.gene58968:CDS |
| CTGGATATCCCTCCCAGTTG+GGG | 0.519889 | 5.2:+39516411 | None:intergenic |
| CCTCTTGGGAGGGAGTATCA+TGG | 0.525248 | 5.2:-39516715 | MS.gene58968:CDS |
| AAACTCCTCGTCAACAAAAG+AGG | 0.525865 | 5.2:+39516466 | None:intergenic |
| CACTCCAAAGATGGCAATGG+AGG | 0.526430 | 5.2:-39515327 | MS.gene58968:CDS |
| TTAGTTAGAAAAGTTGGTGA+TGG | 0.527730 | 5.2:-39515809 | MS.gene58968:CDS |
| ATCCGGTTCCTGTTAATGGT+GGG | 0.527973 | 5.2:-39516282 | MS.gene58968:CDS |
| TAGGACAGAAGCAGAGGCAG+AGG | 0.528179 | 5.2:-39514899 | MS.gene58968:CDS |
| CTCCATTGCCATCTTTGGAG+TGG | 0.530180 | 5.2:+39515328 | None:intergenic |
| GCAAGCTCCTCATCAGAAAA+CGG | 0.531273 | 5.2:+39515674 | None:intergenic |
| AAGTGATGAAGAATCTCCTC+AGG | 0.533439 | 5.2:-39515204 | MS.gene58968:CDS |
| GCCTCCTACTGCCTTGGTGA+AGG | 0.534134 | 5.2:-39516047 | MS.gene58968:CDS |
| TTGGCATGGAATTGGATCGC+GGG | 0.534252 | 5.2:-39516612 | MS.gene58968:CDS |
| CTGTCTGCCAGAAACTTTGG+AGG | 0.540526 | 5.2:-39515738 | MS.gene58968:CDS |
| CTCTCATCCAATTTGGAGAG+TGG | 0.540685 | 5.2:+39515248 | None:intergenic |
| AGGGTCTAGATCACGAATGT+AGG | 0.542891 | 5.2:+39515652 | None:intergenic |
| AACACGCGTCTCCTCCCAGC+AGG | 0.547617 | 5.2:+39516661 | None:intergenic |
| CAGAAGCAGAGGCAGAGGCT+TGG | 0.547858 | 5.2:-39514894 | MS.gene58968:CDS |
| CCATAAGTTTCATCACATCA+AGG | 0.549621 | 5.2:+39516341 | None:intergenic |
| GAGCATTGAGGAGGAAGAGG+AGG | 0.550253 | 5.2:-39515228 | MS.gene58968:CDS |
| TTGAAACGATCTGTTCGGGT+TGG | 0.551827 | 5.2:-39516130 | MS.gene58968:CDS |
| TGGGAGGGATATCCAGCAAA+GGG | 0.553902 | 5.2:-39516404 | MS.gene58968:CDS |
| TTTAGAGGCAAGGAGGATGT+TGG | 0.562538 | 5.2:-39515438 | MS.gene58968:CDS |
| AGCTAATTCCTATTGATCAT+GGG | 0.562986 | 5.2:-39515763 | MS.gene58968:CDS |
| GAGGATGTTGGCAGAGAGGG+AGG | 0.564413 | 5.2:-39515426 | MS.gene58968:CDS |
| TCTCATCCAATTTGGAGAGT+GGG | 0.566781 | 5.2:+39515249 | None:intergenic |
| GATCCGGTTCCTGTTAATGG+TGG | 0.572205 | 5.2:-39516283 | MS.gene58968:CDS |
| CTTAACACAGATAGACATGC+TGG | 0.572709 | 5.2:-39515839 | MS.gene58968:CDS |
| TGACTGCGAGATGCTTCGAA+TGG | 0.574020 | 5.2:-39515624 | MS.gene58968:CDS |
| CTCCCAGTTGGGGACAAACA+AGG | 0.576176 | 5.2:+39516421 | None:intergenic |
| AAAGCCAGAGGCAACCTGCT+GGG | 0.577393 | 5.2:-39516675 | MS.gene58968:CDS |
| CTTGTTTGTCCCCAACTGGG+AGG | 0.579667 | 5.2:-39516420 | MS.gene58968:CDS |
| GATATTGATTGCGATGAAGG+TGG | 0.583383 | 5.2:-39515359 | MS.gene58968:CDS |
| ACTTTACATCATCTGGCCAT+AGG | 0.586682 | 5.2:-39515058 | MS.gene58968:CDS |
| TGGCATGGAATTGGATCGCG+GGG | 0.587761 | 5.2:-39516611 | MS.gene58968:CDS |
| AATCATTTCGAACAGCACTA+AGG | 0.588924 | 5.2:+39516491 | None:intergenic |
| TTGTTTGTTTAGAGGCAAGG+AGG | 0.592570 | 5.2:-39515445 | MS.gene58968:CDS |
| TTCCACTCCAAAGATGGCAA+TGG | 0.594282 | 5.2:-39515330 | MS.gene58968:CDS |
| GCAAAAGGCTCTTCATCGGT+CGG | 0.596026 | 5.2:+39516202 | None:intergenic |
| TAACCTTAGGACAGAAGCAG+AGG | 0.596926 | 5.2:-39514905 | MS.gene58968:CDS |
| ACTATCTCCAAGGACTGAGG+TGG | 0.597749 | 5.2:-39515402 | MS.gene58968:CDS |
| CTTGGCATGGAATTGGATCG+CGG | 0.599942 | 5.2:-39516613 | MS.gene58968:CDS |
| TGATGAGGAGTCCTCTTGGG+AGG | 0.600340 | 5.2:-39516726 | MS.gene58968:CDS |
| TGTGATGAAACTTATGGCTA+AGG | 0.600996 | 5.2:-39516335 | MS.gene58968:CDS |
| GTAAAGCTCTTGGACAGCCG+GGG | 0.601192 | 5.2:-39516153 | MS.gene58968:CDS |
| ACCTTCACCAAGGCAGTAGG+AGG | 0.604659 | 5.2:+39516046 | None:intergenic |
| TCGCGAGTTCTACAGGGGTG+AGG | 0.606075 | 5.2:-39515489 | MS.gene58968:CDS |
| TAAGGGTTGTGTGCTTGGCA+TGG | 0.606790 | 5.2:-39516626 | MS.gene58968:CDS |
| TACGATGCACCGAAGCAACC+GGG | 0.606809 | 5.2:+39515885 | None:intergenic |
| CAAGGAGGATGTTGGCAGAG+AGG | 0.607328 | 5.2:-39515430 | MS.gene58968:CDS |
| TTTCATCACATCAAGGCGTG+TGG | 0.611713 | 5.2:+39516348 | None:intergenic |
| CGAGTTCTACAGGGGTGAGG+AGG | 0.612188 | 5.2:-39515486 | MS.gene58968:CDS |
| AAATAATGTCCAATCATCCT+CGG | 0.612833 | 5.2:+39514980 | None:intergenic |
| CAAATTGGATGAGAGCATTG+AGG | 0.615364 | 5.2:-39515240 | MS.gene58968:CDS |
| AGGCGCAAAAGGCTCTTCAT+CGG | 0.616207 | 5.2:+39516198 | None:intergenic |
| GATGACTCGCGAGTTCTACA+GGG | 0.618979 | 5.2:-39515495 | MS.gene58968:CDS |
| GATCTTCAATGTCAATGATG+AGG | 0.619613 | 5.2:-39516014 | MS.gene58968:CDS |
| GGAGGAGCCAAGTGAACTTG+AGG | 0.621206 | 5.2:-39515468 | MS.gene58968:CDS |
| CTATCTCCAAGGACTGAGGT+GGG | 0.621633 | 5.2:-39515401 | MS.gene58968:CDS |
| CTGGGAGGGATATCCAGCAA+AGG | 0.625870 | 5.2:-39516405 | MS.gene58968:CDS |
| GATGAGGAGTCCTCTTGGGA+GGG | 0.628291 | 5.2:-39516725 | MS.gene58968:CDS |
| AGATGGCAGTTGAAGTGATG+AGG | 0.628913 | 5.2:-39516741 | MS.gene58968:CDS |
| TATGGCTAAGGATATTGTGA+AGG | 0.638957 | 5.2:-39516323 | MS.gene58968:CDS |
| CCATGATACTCCCTCCCAAG+AGG | 0.644125 | 5.2:+39516715 | None:intergenic |
| GAAAACGGAATCGAAGCTTG+AGG | 0.644682 | 5.2:+39515689 | None:intergenic |
| AGAGTCAGAATCAAAGCCAG+AGG | 0.650036 | 5.2:-39516687 | MS.gene58968:CDS |
| GGAGCTGCCAATGATTCGAG+AGG | 0.651572 | 5.2:-39515603 | MS.gene58968:CDS |
| TGTATCCGGCATTCGCCAAG+AGG | 0.652283 | 5.2:-39514935 | MS.gene58968:CDS |
| GTAACCTTCACCAAGGCAGT+AGG | 0.654890 | 5.2:+39516043 | None:intergenic |
| CGAACAGATCGTTTCAACCC+CGG | 0.656066 | 5.2:+39516136 | None:intergenic |
| GAGTCCAGTTCAGACCCAGA+TGG | 0.657322 | 5.2:-39516758 | MS.gene58968:CDS |
| GCATCTCGCAGTCATGAGCA+GGG | 0.668786 | 5.2:+39515633 | None:intergenic |
| AGAGGGAGGAACTATCTCCA+AGG | 0.671920 | 5.2:-39515412 | MS.gene58968:CDS |
| GTGGTCCTATTGAAATATTG+GGG | 0.672980 | 5.2:-39516375 | MS.gene58968:CDS |
| ATTGGATGAGAGCATTGAGG+AGG | 0.673893 | 5.2:-39515237 | MS.gene58968:CDS |
| TTGTGAAGGCGATTAAGATG+GGG | 0.677942 | 5.2:-39516309 | MS.gene58968:CDS |
| GGAACTATCTCCAAGGACTG+AGG | 0.679298 | 5.2:-39515405 | MS.gene58968:CDS |
| GCCAGAGGCAACCTGCTGGG+AGG | 0.686395 | 5.2:-39516672 | MS.gene58968:CDS |
| ATGTACATACTGTTAAGAGG+AGG | 0.703896 | 5.2:-39516585 | MS.gene58968:CDS |
| ATCCAGCAAAGGGATAAGAG+TGG | 0.705880 | 5.2:-39516394 | MS.gene58968:CDS |
| CGAGTGAGTAACCTTCACCA+AGG | 0.723759 | 5.2:+39516036 | None:intergenic |
| ATGACTCGCGAGTTCTACAG+GGG | 0.724018 | 5.2:-39515494 | MS.gene58968:CDS |
| AATGCTTGCAGATATGACCG+AGG | 0.747799 | 5.2:-39514997 | MS.gene58968:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATTTTAGGGATTGTAAT+GGG | - | chr5.2:39515404-39515423 | MS.gene58968:CDS | 20.0% |
| !!! | TATTATTTTAGGGATTGTAA+TGG | - | chr5.2:39515403-39515422 | MS.gene58968:CDS | 20.0% |
| ! | AAGAGGAAATTTATAACCTT+AGG | - | chr5.2:39516732-39516751 | MS.gene58968:CDS | 25.0% |
| ! | GTATAGGGATATTAGATATT+AGG | - | chr5.2:39515785-39515804 | MS.gene58968:CDS | 25.0% |
| ! | TAAGGTTATAAATTTCCTCT+TGG | + | chr5.2:39516733-39516752 | None:intergenic | 25.0% |
| ! | TGAAAAGTTTCTCTGATTAA+AGG | + | chr5.2:39516351-39516370 | None:intergenic | 25.0% |
| !!! | AACTTGTTAGTTAGAAAAGT+TGG | - | chr5.2:39515835-39515854 | MS.gene58968:CDS | 25.0% |
| !!! | AATAGTTGCAACTTTTTCTT+GGG | + | chr5.2:39516490-39516509 | None:intergenic | 25.0% |
| !!! | TTATTTTAGGGATTGTAATG+GGG | - | chr5.2:39515405-39515424 | MS.gene58968:CDS | 25.0% |
| AAATAATGTCCAATCATCCT+CGG | + | chr5.2:39516673-39516692 | None:intergenic | 30.0% | |
| ACAATGTACATACTGTTAAG+AGG | - | chr5.2:39515062-39515081 | MS.gene58968:CDS | 30.0% | |
| AGAAAAAGTTGCAACTATTC+CGG | - | chr5.2:39516491-39516510 | MS.gene58968:CDS | 30.0% | |
| AGCTAATTCCTATTGATCAT+GGG | - | chr5.2:39515887-39515906 | MS.gene58968:CDS | 30.0% | |
| AGTGGTCCTATTGAAATATT+GGG | - | chr5.2:39515274-39515293 | MS.gene58968:CDS | 30.0% | |
| CAATGAATCCACTCAAAATA+AGG | + | chr5.2:39515940-39515959 | None:intergenic | 30.0% | |
| CTTTACCAACAAAACCTTTA+GGG | + | chr5.2:39515483-39515502 | None:intergenic | 30.0% | |
| ! | TTTGATATTGATTGCGATGA+AGG | - | chr5.2:39516288-39516307 | MS.gene58968:CDS | 30.0% |
| !! | AATAACCCTAAAGGTTTTGT+TGG | - | chr5.2:39515475-39515494 | MS.gene58968:CDS | 30.0% |
| !! | ACAAAACCTTTAGGGTTATT+AGG | + | chr5.2:39515475-39515494 | None:intergenic | 30.0% |
| !! | GAATAGTTGCAACTTTTTCT+TGG | + | chr5.2:39516491-39516510 | None:intergenic | 30.0% |
| !! | TTAGTTAGAAAAGTTGGTGA+TGG | - | chr5.2:39515841-39515860 | MS.gene58968:CDS | 30.0% |
| !! | TTCTCTTACTTTTGGTGATA+TGG | - | chr5.2:39515123-39515142 | MS.gene58968:CDS | 30.0% |
| !!! | CTTATTTTGAGTGGATTCAT+TGG | - | chr5.2:39515938-39515957 | MS.gene58968:CDS | 30.0% |
| AATCATTTCGAACAGCACTA+AGG | + | chr5.2:39515162-39515181 | None:intergenic | 35.0% | |
| AATGTCAATGATGAGGTCAA+TGG | - | chr5.2:39515643-39515662 | MS.gene58968:CDS | 35.0% | |
| ACTTGAGGTTGTTTGTTTAG+AGG | - | chr5.2:39516197-39516216 | MS.gene58968:CDS | 35.0% | |
| ATGTACATACTGTTAAGAGG+AGG | - | chr5.2:39515065-39515084 | MS.gene58968:CDS | 35.0% | |
| ATGTCAATGATGAGGTCAAT+GGG | - | chr5.2:39515644-39515663 | MS.gene58968:CDS | 35.0% | |
| ATTGTGAAGGCGATTAAGAT+GGG | - | chr5.2:39515340-39515359 | MS.gene58968:CDS | 35.0% | |
| CCATAAGTTTCATCACATCA+AGG | + | chr5.2:39515312-39515331 | None:intergenic | 35.0% | |
| CCTTGATGTGATGAAACTTA+TGG | - | chr5.2:39515309-39515328 | MS.gene58968:CDS | 35.0% | |
| GAGCTAATTCCTATTGATCA+TGG | - | chr5.2:39515886-39515905 | MS.gene58968:CDS | 35.0% | |
| GAGTGGTCCTATTGAAATAT+TGG | - | chr5.2:39515273-39515292 | MS.gene58968:CDS | 35.0% | |
| GATCTTCAATGTCAATGATG+AGG | - | chr5.2:39515636-39515655 | MS.gene58968:CDS | 35.0% | |
| GATGTAAAGTAGCCATTATC+CGG | + | chr5.2:39516582-39516601 | None:intergenic | 35.0% | |
| GATTGCCCCAATATTTCAAT+AGG | + | chr5.2:39515283-39515302 | None:intergenic | 35.0% | |
| GCTTTACCAACAAAACCTTT+AGG | + | chr5.2:39515484-39515503 | None:intergenic | 35.0% | |
| GGATGATTGGACATTATTTC+TGG | - | chr5.2:39516674-39516693 | MS.gene58968:CDS | 35.0% | |
| GTGGTCCTATTGAAATATTG+GGG | - | chr5.2:39515275-39515294 | MS.gene58968:CDS | 35.0% | |
| TATGGCTAAGGATATTGTGA+AGG | - | chr5.2:39515327-39515346 | MS.gene58968:CDS | 35.0% | |
| TATTGTGAAGGCGATTAAGA+TGG | - | chr5.2:39515339-39515358 | MS.gene58968:CDS | 35.0% | |
| TGTGATGAAACTTATGGCTA+AGG | - | chr5.2:39515315-39515334 | MS.gene58968:CDS | 35.0% | |
| TTCAGTGATACAGTAATCTC+CGG | + | chr5.2:39516513-39516532 | None:intergenic | 35.0% | |
| ! | AATGGCTACTTTACATCATC+TGG | - | chr5.2:39516585-39516604 | MS.gene58968:CDS | 35.0% |
| ! | GAAGAGAGTTCTCTTACTTT+TGG | - | chr5.2:39515115-39515134 | MS.gene58968:CDS | 35.0% |
| !! | GATTTTGATGCTAGTGATCA+TGG | - | chr5.2:39515730-39515749 | MS.gene58968:CDS | 35.0% |
| !! | TGGAGGTGCGTATTATTTTA+GGG | - | chr5.2:39515393-39515412 | MS.gene58968:CDS | 35.0% |
| !! | TTGGAGGTGCGTATTATTTT+AGG | - | chr5.2:39515392-39515411 | MS.gene58968:CDS | 35.0% |
| !!! | AGAGTGTTTCTGCTTTTTCT+CGG | + | chr5.2:39516550-39516569 | None:intergenic | 35.0% |
| AAAAAGCAGAAACACTCTGG+AGG | - | chr5.2:39516552-39516571 | MS.gene58968:CDS | 40.0% | |
| AAACTCCTCGTCAACAAAAG+AGG | + | chr5.2:39515187-39515206 | None:intergenic | 40.0% | |
| AAGTGATGAAGAATCTCCTC+AGG | - | chr5.2:39516446-39516465 | MS.gene58968:CDS | 40.0% | |
| ACTTTACATCATCTGGCCAT+AGG | - | chr5.2:39516592-39516611 | MS.gene58968:CDS | 40.0% | |
| AGGTCAATGGGAATTGTTTC+CGG | - | chr5.2:39515656-39515675 | MS.gene58968:CDS | 40.0% | |
| AGGTTGTTTGTTTAGAGGCA+AGG | - | chr5.2:39516202-39516221 | MS.gene58968:CDS | 40.0% | |
| ATCAGATTCCACTCCAAAGA+TGG | - | chr5.2:39516314-39516333 | MS.gene58968:CDS | 40.0% | |
| ATTACGAAGCTTATGCTTGC+AGG | + | chr5.2:39516636-39516655 | None:intergenic | 40.0% | |
| CAAACAACCTCAAGTTCACT+TGG | + | chr5.2:39516192-39516211 | None:intergenic | 40.0% | |
| CTCAATGCTCTCATCCAATT+TGG | + | chr5.2:39516412-39516431 | None:intergenic | 40.0% | |
| CTTAACACAGATAGACATGC+TGG | - | chr5.2:39515811-39515830 | MS.gene58968:CDS | 40.0% | |
| GAAGAATCTCCTCAGGAATT+TGG | - | chr5.2:39516453-39516472 | MS.gene58968:CDS | 40.0% | |
| GAGAAAAAGCAGAAACACTC+TGG | - | chr5.2:39516549-39516568 | MS.gene58968:CDS | 40.0% | |
| GGTCTTTGTCTTGCTGAAAT+TGG | - | chr5.2:39516126-39516145 | MS.gene58968:CDS | 40.0% | |
| GTAAGAGAACTCTCTTCAAC+AGG | + | chr5.2:39515112-39515131 | None:intergenic | 40.0% | |
| GTTTCAAGAGTTGCTGTATC+CGG | - | chr5.2:39516701-39516720 | MS.gene58968:CDS | 40.0% | |
| TAAGGATCCTCCAAAGTTTC+TGG | + | chr5.2:39515922-39515941 | None:intergenic | 40.0% | |
| TCTCATCCAATTTGGAGAGT+GGG | + | chr5.2:39516404-39516423 | None:intergenic | 40.0% | |
| TGCTAACAAGTCTCTTTCTC+CGG | + | chr5.2:39515678-39515697 | None:intergenic | 40.0% | |
| TTAGGGTTATTAGGCGCAAA+AGG | + | chr5.2:39515466-39515485 | None:intergenic | 40.0% | |
| TTCAGCATGCACTTGGAAAT+GGG | - | chr5.2:39516367-39516386 | MS.gene58968:CDS | 40.0% | |
| TTGTGAAGGCGATTAAGATG+GGG | - | chr5.2:39515341-39515360 | MS.gene58968:CDS | 40.0% | |
| TTGTTTGTTTAGAGGCAAGG+AGG | - | chr5.2:39516205-39516224 | MS.gene58968:CDS | 40.0% | |
| TTTCAGCATGCACTTGGAAA+TGG | - | chr5.2:39516366-39516385 | MS.gene58968:CDS | 40.0% | |
| TTTGCGCCTAATAACCCTAA+AGG | - | chr5.2:39515466-39515485 | MS.gene58968:CDS | 40.0% | |
| ! | AGCAGCCTCTTTGAGAAAAA+TGG | + | chr5.2:39516100-39516119 | None:intergenic | 40.0% |
| ! | GAAACTTTTCAGCATGCACT+TGG | - | chr5.2:39516360-39516379 | MS.gene58968:CDS | 40.0% |
| ! | GATATTGATTGCGATGAAGG+TGG | - | chr5.2:39516291-39516310 | MS.gene58968:CDS | 40.0% |
| ! | TTCGATTCCGTTTTCTGATG+AGG | - | chr5.2:39515969-39515988 | MS.gene58968:CDS | 40.0% |
| !! | AGAAAAGTTGGTGATGGCAT+TGG | - | chr5.2:39515847-39515866 | MS.gene58968:CDS | 40.0% |
| !! | ATGGCATTGGAACTTTTGGT+CGG | - | chr5.2:39515860-39515879 | MS.gene58968:CDS | 40.0% |
| !! | CAAATTGGATGAGAGCATTG+AGG | - | chr5.2:39516410-39516429 | MS.gene58968:CDS | 40.0% |
| !! | CTGCACCATTTTTCTCAAAG+AGG | - | chr5.2:39516092-39516111 | MS.gene58968:CDS | 40.0% |
| !! | GAAAAAGCACCAAATTCCTG+AGG | + | chr5.2:39516465-39516484 | None:intergenic | 40.0% |
| !!! | GGTTTTGTTGGTAAAGCTCT+TGG | - | chr5.2:39515487-39515506 | MS.gene58968:CDS | 40.0% |
| !!! | TGGAGGATCCTTATTTTGAG+TGG | - | chr5.2:39515929-39515948 | MS.gene58968:CDS | 40.0% |
| AAGTGATGAGGAGTCCTCTT+GGG | - | chr5.2:39514921-39514940 | MS.gene58968:CDS | 45.0% | |
| AATGCTTGCAGATATGACCG+AGG | - | chr5.2:39516653-39516672 | MS.gene58968:CDS | 45.0% | |
| AATTTCCTCTTGGCGAATGC+CGG | + | chr5.2:39516723-39516742 | None:intergenic | 45.0% | |
| AGACAAGCCTCTCGAATCAT+TGG | + | chr5.2:39516057-39516076 | None:intergenic | 45.0% | |
| AGACAGAGCCCATGATCAAT+AGG | + | chr5.2:39515898-39515917 | None:intergenic | 45.0% | |
| AGAGTCAGAATCAAAGCCAG+AGG | - | chr5.2:39514963-39514982 | MS.gene58968:CDS | 45.0% | |
| AGATGGCAGTTGAAGTGATG+AGG | - | chr5.2:39514909-39514928 | MS.gene58968:CDS | 45.0% | |
| AGGGTCTAGATCACGAATGT+AGG | + | chr5.2:39516001-39516020 | None:intergenic | 45.0% | |
| ATCCAGCAAAGGGATAAGAG+TGG | - | chr5.2:39515256-39515275 | MS.gene58968:CDS | 45.0% | |
| ATCCGGTTCCTGTTAATGGT+GGG | - | chr5.2:39515368-39515387 | MS.gene58968:CDS | 45.0% | |
| ATCGATCCGGTTCCTGTTAA+TGG | - | chr5.2:39515364-39515383 | MS.gene58968:CDS | 45.0% | |
| CAGATATGACCGAGGATGAT+TGG | - | chr5.2:39516661-39516680 | MS.gene58968:CDS | 45.0% | |
| CATCACTTCAACTGCCATCT+GGG | + | chr5.2:39514909-39514928 | None:intergenic | 45.0% | |
| CTCAAAGAGGCTGCTGAATT+TGG | - | chr5.2:39516105-39516124 | MS.gene58968:CDS | 45.0% | |
| CTCTCATCCAATTTGGAGAG+TGG | + | chr5.2:39516405-39516424 | None:intergenic | 45.0% | |
| GAAAACGGAATCGAAGCTTG+AGG | + | chr5.2:39515964-39515983 | None:intergenic | 45.0% | |
| GATTAAGATGGGGATCGATC+CGG | - | chr5.2:39515351-39515370 | MS.gene58968:CDS | 45.0% | |
| GCAAGCTCCTCATCAGAAAA+CGG | + | chr5.2:39515979-39515998 | None:intergenic | 45.0% | |
| GTGTTCGTCCAAACCGATAA+GGG | - | chr5.2:39515007-39515026 | MS.gene58968:CDS | 45.0% | |
| TAACCTTAGGACAGAAGCAG+AGG | - | chr5.2:39516745-39516764 | MS.gene58968:CDS | 45.0% | |
| TCATCACTTCAACTGCCATC+TGG | + | chr5.2:39514910-39514929 | None:intergenic | 45.0% | |
| TCTGGAGGAAAACCGGATAA+TGG | - | chr5.2:39516567-39516586 | MS.gene58968:CDS | 45.0% | |
| TTCCACTCCAAAGATGGCAA+TGG | - | chr5.2:39516320-39516339 | MS.gene58968:CDS | 45.0% | |
| TTGAAACGATCTGTTCGGGT+TGG | - | chr5.2:39515520-39515539 | MS.gene58968:CDS | 45.0% | |
| TTGTGTGCTTGGCATGGAAT+TGG | - | chr5.2:39515030-39515049 | MS.gene58968:CDS | 45.0% | |
| TTTAGAGGCAAGGAGGATGT+TGG | - | chr5.2:39516212-39516231 | MS.gene58968:CDS | 45.0% | |
| TTTCATCACATCAAGGCGTG+TGG | + | chr5.2:39515305-39515324 | None:intergenic | 45.0% | |
| ! | ATTCGCCTCTTTTGTTGACG+AGG | - | chr5.2:39515179-39515198 | MS.gene58968:CDS | 45.0% |
| ! | GAAACACTCTGGAGGAAAAC+CGG | - | chr5.2:39516560-39516579 | MS.gene58968:CDS | 45.0% |
| ! | TTGCTTCGGTGCATCGTATA+GGG | - | chr5.2:39515770-39515789 | MS.gene58968:CDS | 45.0% |
| !! | ATTGGATGAGAGCATTGAGG+AGG | - | chr5.2:39516413-39516432 | MS.gene58968:CDS | 45.0% |
| !! | GGTGATGGCATTGGAACTTT+TGG | - | chr5.2:39515856-39515875 | MS.gene58968:CDS | 45.0% |
| !! | TGGCATTGGAACTTTTGGTC+GGG | - | chr5.2:39515861-39515880 | MS.gene58968:CDS | 45.0% |
| !!! | CTGCTTTTTCTCGGCTAACA+TGG | + | chr5.2:39516541-39516560 | None:intergenic | 45.0% |
| AAGGAGGATGTTGGCAGAGA+GGG | - | chr5.2:39516221-39516240 | MS.gene58968:CDS | 50.0% | |
| ACCGATAAGGGTTGTGTGCT+TGG | - | chr5.2:39515019-39515038 | MS.gene58968:CDS | 50.0% | |
| ACTATCTCCAAGGACTGAGG+TGG | - | chr5.2:39516248-39516267 | MS.gene58968:CDS | 50.0% | |
| AGAGGGAGGAACTATCTCCA+AGG | - | chr5.2:39516238-39516257 | MS.gene58968:CDS | 50.0% | |
| AGCCCACCATTAACAGGAAC+CGG | + | chr5.2:39515373-39515392 | None:intergenic | 50.0% | |
| AGGCGCAAAAGGCTCTTCAT+CGG | + | chr5.2:39515455-39515474 | None:intergenic | 50.0% | |
| ATACGATGCACCGAAGCAAC+CGG | + | chr5.2:39515769-39515788 | None:intergenic | 50.0% | |
| ATGACTCGCGAGTTCTACAG+GGG | - | chr5.2:39516156-39516175 | MS.gene58968:CDS | 50.0% | |
| CACTCCAAAGATGGCAATGG+AGG | - | chr5.2:39516323-39516342 | MS.gene58968:CDS | 50.0% | |
| CGAACAGATCGTTTCAACCC+CGG | + | chr5.2:39515517-39515536 | None:intergenic | 50.0% | |
| CGAGTGAGTAACCTTCACCA+AGG | + | chr5.2:39515617-39515636 | None:intergenic | 50.0% | |
| CGGGGTTGAAACGATCTGTT+CGG | - | chr5.2:39515515-39515534 | MS.gene58968:CDS | 50.0% | |
| CGTGTTCGTCCAAACCGATA+AGG | - | chr5.2:39515006-39515025 | MS.gene58968:CDS | 50.0% | |
| CTATCTCCAAGGACTGAGGT+GGG | - | chr5.2:39516249-39516268 | MS.gene58968:CDS | 50.0% | |
| CTGTCTGCCAGAAACTTTGG+AGG | - | chr5.2:39515912-39515931 | MS.gene58968:CDS | 50.0% | |
| CTTGGCATGGAATTGGATCG+CGG | - | chr5.2:39515037-39515056 | MS.gene58968:CDS | 50.0% | |
| GAAGTGATGAGGAGTCCTCT+TGG | - | chr5.2:39514920-39514939 | MS.gene58968:CDS | 50.0% | |
| GACCACTCTTATCCCTTTGC+TGG | + | chr5.2:39515261-39515280 | None:intergenic | 50.0% | |
| GATCCGGTTCCTGTTAATGG+TGG | - | chr5.2:39515367-39515386 | MS.gene58968:CDS | 50.0% | |
| GATGACTCGCGAGTTCTACA+GGG | - | chr5.2:39516155-39516174 | MS.gene58968:CDS | 50.0% | |
| GCAAAAGGCTCTTCATCGGT+CGG | + | chr5.2:39515451-39515470 | None:intergenic | 50.0% | |
| GCCAAGCACACAACCCTTAT+CGG | + | chr5.2:39515023-39515042 | None:intergenic | 50.0% | |
| GCTCTGTCTGCCAGAAACTT+TGG | - | chr5.2:39515909-39515928 | MS.gene58968:CDS | 50.0% | |
| GGAACTATCTCCAAGGACTG+AGG | - | chr5.2:39516245-39516264 | MS.gene58968:CDS | 50.0% | |
| GGATCCTCCATTGCCATCTT+TGG | + | chr5.2:39516330-39516349 | None:intergenic | 50.0% | |
| GGGGTTGAAACGATCTGTTC+GGG | - | chr5.2:39515516-39515535 | MS.gene58968:CDS | 50.0% | |
| GTAACCTTCACCAAGGCAGT+AGG | + | chr5.2:39515610-39515629 | None:intergenic | 50.0% | |
| TAAGGGTTGTGTGCTTGGCA+TGG | - | chr5.2:39515024-39515043 | MS.gene58968:CDS | 50.0% | |
| TAATGTGCCTCCTACTGCCT+TGG | - | chr5.2:39515597-39515616 | MS.gene58968:CDS | 50.0% | |
| TGACTGCGAGATGCTTCGAA+TGG | - | chr5.2:39516026-39516045 | MS.gene58968:CDS | 50.0% | |
| TGATGACTCGCGAGTTCTAC+AGG | - | chr5.2:39516154-39516173 | MS.gene58968:CDS | 50.0% | |
| TGGGAGGGATATCCAGCAAA+GGG | - | chr5.2:39515246-39515265 | MS.gene58968:CDS | 50.0% | |
| TGGTAAAGCTCTTGGACAGC+CGG | - | chr5.2:39515495-39515514 | MS.gene58968:CDS | 50.0% | |
| TTGGCATGGAATTGGATCGC+GGG | - | chr5.2:39515038-39515057 | MS.gene58968:CDS | 50.0% | |
| TTGTTTGTCCCCAACTGGGA+GGG | - | chr5.2:39515231-39515250 | MS.gene58968:CDS | 50.0% | |
| ! | ACTCCTTGTTTGTCCCCAAC+TGG | - | chr5.2:39515226-39515245 | MS.gene58968:CDS | 50.0% |
| ! | CATTGGAACTTTTGGTCGGG+TGG | - | chr5.2:39515864-39515883 | MS.gene58968:CDS | 50.0% |
| ! | CTCCATTGCCATCTTTGGAG+TGG | + | chr5.2:39516325-39516344 | None:intergenic | 50.0% |
| ! | CTCCTTGTTTGTCCCCAACT+GGG | - | chr5.2:39515227-39515246 | MS.gene58968:CDS | 50.0% |
| ! | GCACACAACCCTTATCGGTT+TGG | + | chr5.2:39515018-39515037 | None:intergenic | 50.0% |
| ! | GTTGCTTCGGTGCATCGTAT+AGG | - | chr5.2:39515769-39515788 | MS.gene58968:CDS | 50.0% |
| !! | ATCTGTTCGGGTTGGAGAGA+CGG | - | chr5.2:39515528-39515547 | MS.gene58968:CDS | 50.0% |
| !! | CTCTTGGGAGGGAGTATCAT+GGG | - | chr5.2:39514936-39514955 | MS.gene58968:CDS | 50.0% |
| !! | GGTTGGAGAGACGGGTTTTA+GGG | - | chr5.2:39515537-39515556 | MS.gene58968:CDS | 50.0% |
| !! | GTTCCTGTTAATGGTGGGCT+TGG | - | chr5.2:39515373-39515392 | MS.gene58968:CDS | 50.0% |
| !! | TGAGAGCATTGAGGAGGAAG+AGG | - | chr5.2:39516419-39516438 | MS.gene58968:CDS | 50.0% |
| AAAGCCAGAGGCAACCTGCT+GGG | - | chr5.2:39514975-39514994 | MS.gene58968:CDS | 55.0% | |
| ACCTTCACCAAGGCAGTAGG+AGG | + | chr5.2:39515607-39515626 | None:intergenic | 55.0% | |
| ACTGCCATCTGGGTCTGAAC+TGG | + | chr5.2:39514899-39514918 | None:intergenic | 55.0% | |
| AGAGGCTTGTCTCAGAGTGC+TGG | - | chr5.2:39516065-39516084 | MS.gene58968:CDS | 55.0% | |
| AGCATCTCGCAGTCATGAGC+AGG | + | chr5.2:39516021-39516040 | None:intergenic | 55.0% | |
| CAAGGAGGATGTTGGCAGAG+AGG | - | chr5.2:39516220-39516239 | MS.gene58968:CDS | 55.0% | |
| CCATGATACTCCCTCCCAAG+AGG | + | chr5.2:39514938-39514957 | None:intergenic | 55.0% | |
| CCTCCAAGCCCACCATTAAC+AGG | + | chr5.2:39515379-39515398 | None:intergenic | 55.0% | |
| CTCCCAGTTGGGGACAAACA+AGG | + | chr5.2:39515232-39515251 | None:intergenic | 55.0% | |
| CTGCCTCTGCTTCTGTCCTA+AGG | + | chr5.2:39516751-39516770 | None:intergenic | 55.0% | |
| CTGGATATCCCTCCCAGTTG+GGG | + | chr5.2:39515242-39515261 | None:intergenic | 55.0% | |
| CTGGGAGGGATATCCAGCAA+AGG | - | chr5.2:39515245-39515264 | MS.gene58968:CDS | 55.0% | |
| CTTGTTTGTCCCCAACTGGG+AGG | - | chr5.2:39515230-39515249 | MS.gene58968:CDS | 55.0% | |
| GAGTCCAGTTCAGACCCAGA+TGG | - | chr5.2:39514892-39514911 | MS.gene58968:CDS | 55.0% | |
| GATGAGGAGTCCTCTTGGGA+GGG | - | chr5.2:39514925-39514944 | MS.gene58968:CDS | 55.0% | |
| GCATCTCGCAGTCATGAGCA+GGG | + | chr5.2:39516020-39516039 | None:intergenic | 55.0% | |
| GCTGCTCATTGGCACTCCTA+TGG | + | chr5.2:39516611-39516630 | None:intergenic | 55.0% | |
| GCTGGATATCCCTCCCAGTT+GGG | + | chr5.2:39515243-39515262 | None:intergenic | 55.0% | |
| GGAGCTGCCAATGATTCGAG+AGG | - | chr5.2:39516047-39516066 | MS.gene58968:CDS | 55.0% | |
| GGAGGAGCCAAGTGAACTTG+AGG | - | chr5.2:39516182-39516201 | MS.gene58968:CDS | 55.0% | |
| GGAGGTTGCGGCTTATCTTC+TGG | - | chr5.2:39515558-39515577 | MS.gene58968:CDS | 55.0% | |
| GGTAAAGCTCTTGGACAGCC+GGG | - | chr5.2:39515496-39515515 | MS.gene58968:CDS | 55.0% | |
| GTAAAGCTCTTGGACAGCCG+GGG | - | chr5.2:39515497-39515516 | MS.gene58968:CDS | 55.0% | |
| TACGATGCACCGAAGCAACC+GGG | + | chr5.2:39515768-39515787 | None:intergenic | 55.0% | |
| TAGGACAGAAGCAGAGGCAG+AGG | - | chr5.2:39516751-39516770 | MS.gene58968:CDS | 55.0% | |
| TCATGGTACGTCGAGCTTCC+CGG | - | chr5.2:39515747-39515766 | MS.gene58968:CDS | 55.0% | |
| TGATGAGGAGTCCTCTTGGG+AGG | - | chr5.2:39514924-39514943 | MS.gene58968:CDS | 55.0% | |
| TGCTGGATATCCCTCCCAGT+TGG | + | chr5.2:39515244-39515263 | None:intergenic | 55.0% | |
| TGGCATGGAATTGGATCGCG+GGG | - | chr5.2:39515039-39515058 | MS.gene58968:CDS | 55.0% | |
| TGTATCCGGCATTCGCCAAG+AGG | - | chr5.2:39516715-39516734 | MS.gene58968:CDS | 55.0% | |
| !! | CCTCTTGGGAGGGAGTATCA+TGG | - | chr5.2:39514935-39514954 | MS.gene58968:CDS | 55.0% |
| !! | CCTGTTAATGGTGGGCTTGG+AGG | - | chr5.2:39515376-39515395 | MS.gene58968:CDS | 55.0% |
| !! | GAGCATTGAGGAGGAAGAGG+AGG | - | chr5.2:39516422-39516441 | MS.gene58968:CDS | 55.0% |
| !! | GGGTTGGAGAGACGGGTTTT+AGG | - | chr5.2:39515536-39515555 | MS.gene58968:CDS | 55.0% |
| !! | TCTGTTCGGGTTGGAGAGAC+GGG | - | chr5.2:39515529-39515548 | MS.gene58968:CDS | 55.0% |
| !!! | GACGGGTTTTAGGGAGGTTG+CGG | - | chr5.2:39515546-39515565 | MS.gene58968:CDS | 55.0% |
| !!! | TGGAGAGACGGGTTTTAGGG+AGG | - | chr5.2:39515540-39515559 | MS.gene58968:CDS | 55.0% |
| CAAAGCCAGAGGCAACCTGC+TGG | - | chr5.2:39514974-39514993 | MS.gene58968:CDS | 60.0% | |
| CAGAAGCAGAGGCAGAGGCT+TGG | - | chr5.2:39516756-39516775 | MS.gene58968:CDS | 60.0% | |
| CGAGTTCTACAGGGGTGAGG+AGG | - | chr5.2:39516164-39516183 | MS.gene58968:CDS | 60.0% | |
| GAGGATGTTGGCAGAGAGGG+AGG | - | chr5.2:39516224-39516243 | MS.gene58968:CDS | 60.0% | |
| GCCTCCTACTGCCTTGGTGA+AGG | - | chr5.2:39515603-39515622 | MS.gene58968:CDS | 60.0% | |
| GCGCAGCCCACTCTCCAAAT+TGG | - | chr5.2:39516395-39516414 | MS.gene58968:CDS | 60.0% | |
| GCTTGCAGGCAGCTGCTCAT+TGG | + | chr5.2:39516622-39516641 | None:intergenic | 60.0% | |
| GTCGAGCTTCCCGGTTGCTT+CGG | - | chr5.2:39515756-39515775 | MS.gene58968:CDS | 60.0% | |
| TCGCGAGTTCTACAGGGGTG+AGG | - | chr5.2:39516161-39516180 | MS.gene58968:CDS | 60.0% | |
| TCGTCTCCCACCTCAGTCCT+TGG | + | chr5.2:39516258-39516277 | None:intergenic | 60.0% | |
| AACACGCGTCTCCTCCCAGC+AGG | + | chr5.2:39514992-39515011 | None:intergenic | 65.0% | |
| TCCTCCCAGCAGGTTGCCTC+TGG | + | chr5.2:39514982-39515001 | None:intergenic | 65.0% | |
| GCCAGAGGCAACCTGCTGGG+AGG | - | chr5.2:39514978-39514997 | MS.gene58968:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 39514875 | 39516797 | 39514875 | ID=MS.gene58968 |
| chr5.2 | mRNA | 39514875 | 39516797 | 39514875 | ID=MS.gene58968.t1;Parent=MS.gene58968 |
| chr5.2 | exon | 39514875 | 39516797 | 39514875 | ID=MS.gene58968.t1.exon1;Parent=MS.gene58968.t1 |
| chr5.2 | CDS | 39514875 | 39516797 | 39514875 | ID=cds.MS.gene58968.t1;Parent=MS.gene58968.t1 |
| Gene Sequence |
| Protein sequence |
