Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029676.t1 | XP_013443501.1 | 97.5 | 631 | 13 | 2 | 1 | 631 | 13 | 640 | 0.00E+00 | 1204.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029676.t1 | Q9SI52 | 68.9 | 652 | 168 | 11 | 1 | 631 | 13 | 650 | 4.9e-239 | 828.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029676.t1 | A0A072TK16 | 97.5 | 631 | 13 | 2 | 1 | 631 | 13 | 640 | 0.0e+00 | 1204.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene029676 | MS.gene61052 | PPI |
| MS.gene029676 | MS.gene038501 | PPI |
| MS.gene029676 | MS.gene71236 | PPI |
| MS.gene58968 | MS.gene029676 | PPI |
| MS.gene66860 | MS.gene029676 | PPI |
| MS.gene029676 | MS.gene009056 | PPI |
| MS.gene029676 | MS.gene62152 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029676.t1 | MTR_0009s0120 | 97.781 | 631 | 11 | 2 | 1 | 631 | 13 | 640 | 0.0 | 1269 |
| MS.gene029676.t1 | MTR_8g066090 | 77.480 | 635 | 132 | 5 | 1 | 631 | 13 | 640 | 0.0 | 966 |
| MS.gene029676.t1 | MTR_7g017360 | 66.393 | 610 | 194 | 6 | 24 | 631 | 32 | 632 | 0.0 | 790 |
| MS.gene029676.t1 | MTR_5g009120 | 40.187 | 321 | 167 | 6 | 140 | 447 | 254 | 562 | 1.62e-62 | 218 |
| MS.gene029676.t1 | MTR_8g099565 | 40.952 | 315 | 159 | 7 | 146 | 447 | 273 | 573 | 4.23e-62 | 216 |
| MS.gene029676.t1 | MTR_3g091400 | 39.535 | 301 | 152 | 7 | 136 | 419 | 247 | 534 | 7.94e-59 | 207 |
| MS.gene029676.t1 | MTR_8g027610 | 39.731 | 297 | 141 | 8 | 143 | 419 | 269 | 547 | 1.83e-58 | 207 |
| MS.gene029676.t1 | MTR_7g117395 | 41.135 | 282 | 132 | 7 | 154 | 419 | 284 | 547 | 1.85e-56 | 201 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029676.t1 | AT2G03890 | 67.945 | 652 | 174 | 11 | 1 | 631 | 13 | 650 | 0.0 | 854 |
| MS.gene029676.t1 | AT1G26270 | 67.610 | 636 | 183 | 11 | 1 | 631 | 13 | 630 | 0.0 | 834 |
| MS.gene029676.t1 | AT1G13640 | 65.888 | 642 | 188 | 10 | 1 | 631 | 1 | 622 | 0.0 | 817 |
| MS.gene029676.t1 | AT1G13640 | 65.888 | 642 | 188 | 10 | 1 | 631 | 1 | 622 | 0.0 | 817 |
| MS.gene029676.t1 | AT2G03890 | 65.611 | 442 | 128 | 8 | 204 | 631 | 99 | 530 | 0.0 | 546 |
| MS.gene029676.t1 | AT2G03890 | 64.516 | 93 | 22 | 3 | 1 | 86 | 13 | 101 | 1.77e-26 | 114 |
| MS.gene029676.t1 | AT3G56600 | 40.653 | 551 | 247 | 10 | 96 | 631 | 48 | 533 | 1.03e-121 | 372 |
| MS.gene029676.t1 | AT3G56600 | 40.653 | 551 | 247 | 10 | 96 | 631 | 51 | 536 | 1.41e-121 | 371 |
| MS.gene029676.t1 | AT3G56600 | 40.653 | 551 | 247 | 10 | 96 | 631 | 51 | 536 | 1.41e-121 | 371 |
| MS.gene029676.t1 | AT2G40850 | 41.697 | 542 | 259 | 14 | 100 | 631 | 67 | 561 | 2.93e-121 | 371 |
| MS.gene029676.t1 | AT5G24240 | 39.941 | 338 | 168 | 9 | 136 | 460 | 242 | 557 | 2.97e-64 | 222 |
| MS.gene029676.t1 | AT5G24240 | 39.941 | 338 | 168 | 9 | 136 | 460 | 242 | 557 | 2.97e-64 | 222 |
| MS.gene029676.t1 | AT2G46500 | 35.363 | 427 | 213 | 11 | 35 | 419 | 115 | 520 | 6.80e-64 | 221 |
| MS.gene029676.t1 | AT2G46500 | 35.363 | 427 | 213 | 11 | 35 | 419 | 115 | 520 | 6.80e-64 | 221 |
| MS.gene029676.t1 | AT2G46500 | 31.104 | 299 | 148 | 10 | 35 | 291 | 115 | 397 | 2.28e-23 | 103 |
Find 185 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAAAGTTTCTCTGATTAA+AGG | 0.184139 | 5.4:+37979767 | None:intergenic |
| CTCAAAGAGGCTGCTGAATT+TGG | 0.201939 | 5.4:-37980013 | MS.gene029676:CDS |
| TAAGGATCCTCCAAAGTTTC+TGG | 0.229441 | 5.4:+37980199 | None:intergenic |
| CTCAATGCTCTCATCCAATT+TGG | 0.245000 | 5.4:+37979706 | None:intergenic |
| GGATCCTCCATTGCCATCTT+TGG | 0.251549 | 5.4:+37979788 | None:intergenic |
| ATCGATCCGGTTCCTGTTAA+TGG | 0.258185 | 5.4:-37980754 | MS.gene029676:CDS |
| GGTCTCTGTCTTGCTGAAAT+TGG | 0.272049 | 5.4:-37979992 | MS.gene029676:CDS |
| GGGTTGGGGAGACGGGATTT+AGG | 0.274990 | 5.4:-37980582 | MS.gene029676:CDS |
| GTATAGGGATATTAGATATT+AGG | 0.275793 | 5.4:-37980333 | MS.gene029676:CDS |
| TGAAACGATCTGTTCGGGTT+GGG | 0.280717 | 5.4:-37980597 | MS.gene029676:CDS |
| AGGTCAATGGGAATTGTTTC+CGG | 0.281282 | 5.4:-37980462 | MS.gene029676:CDS |
| CGAACTTGAGGTTGTTTGTT+TGG | 0.290157 | 5.4:-37979924 | MS.gene029676:CDS |
| GAAGAATCTCCTCAGGAATT+TGG | 0.298437 | 5.4:-37979662 | MS.gene029676:CDS |
| TCGTCTCCCACCTCAGTTCT+TGG | 0.299253 | 5.4:+37979860 | None:intergenic |
| CTTTACCAACAAAACCTTTA+GGG | 0.300434 | 5.4:+37980638 | None:intergenic |
| GAAGAGAGTTCTCTTACTTT+TGG | 0.300456 | 5.4:-37981003 | MS.gene029676:CDS |
| GCCAAGCACACAACCCTTAT+CGG | 0.314484 | 5.4:+37981098 | None:intergenic |
| CAATGAATCCACTCAAAATA+AGG | 0.318986 | 5.4:+37980181 | None:intergenic |
| GGAGGTTGCGGCTTATCTTC+TGG | 0.319111 | 5.4:-37980560 | MS.gene029676:CDS |
| GAGTGGTCCTATTGAAATAT+TGG | 0.322225 | 5.4:-37980845 | MS.gene029676:CDS |
| ATTACGAAGCTTATGCTTGC+AGG | 0.325291 | 5.4:+37979476 | None:intergenic |
| TTTCAGCATGCACTTGGAAA+TGG | 0.327037 | 5.4:-37979749 | MS.gene029676:CDS |
| GCTTTACCAACAAAACCTTT+AGG | 0.335363 | 5.4:+37980637 | None:intergenic |
| ACTCCTTGTTTGTCCCCAAC+TGG | 0.339211 | 5.4:-37980892 | MS.gene029676:CDS |
| GGTTGGGGAGACGGGATTTA+GGG | 0.340586 | 5.4:-37980581 | MS.gene029676:CDS |
| AGTGGTCCTATTGAAATATT+GGG | 0.341072 | 5.4:-37980844 | MS.gene029676:CDS |
| ACAAAACCTTTAGGGTTATT+CGG | 0.350903 | 5.4:+37980646 | None:intergenic |
| GAAACACTCTGGAGGAAAAC+TGG | 0.352141 | 5.4:-37979555 | MS.gene029676:CDS |
| GCTGGATATCCCTCCCAGTT+GGG | 0.353656 | 5.4:+37980878 | None:intergenic |
| GGTGATGGCATTGGAACTTT+TGG | 0.354061 | 5.4:-37980262 | MS.gene029676:CDS |
| GCGTAGCCCACTCTCCAAAT+TGG | 0.354749 | 5.4:-37979720 | MS.gene029676:CDS |
| TCATGGTACGTCGAGCTTCC+CGG | 0.361544 | 5.4:-37980371 | MS.gene029676:CDS |
| GATTGCCCCAATATTTCAAT+AGG | 0.361720 | 5.4:+37980838 | None:intergenic |
| GACCACTCTTATCCCTTTGC+TGG | 0.361794 | 5.4:+37980860 | None:intergenic |
| GCAAGCTCCTCATCAGAAAA+AGG | 0.367008 | 5.4:+37980142 | None:intergenic |
| GTTGCTTCGGTGCATCGTAT+AGG | 0.369514 | 5.4:-37980349 | MS.gene029676:CDS |
| CCTCCAAGCCCACCATTAAC+AGG | 0.381577 | 5.4:+37980742 | None:intergenic |
| ATATTACTCAACTTCAAAAC+TGG | 0.381955 | 5.4:+37979321 | None:intergenic |
| GTTCCTGTTAATGGTGGGCT+TGG | 0.393474 | 5.4:-37980745 | MS.gene029676:CDS |
| CCTGTTAATGGTGGGCTTGG+AGG | 0.395549 | 5.4:-37980742 | MS.gene029676:CDS |
| TTGCTTCGGTGCATCGTATA+GGG | 0.398997 | 5.4:-37980348 | MS.gene029676:CDS |
| TCCTCCCAGCAGGTTGCCTC+TGG | 0.399427 | 5.4:+37981139 | None:intergenic |
| AACTTGTTAGTTAGAAAAGT+TGG | 0.401570 | 5.4:-37980283 | MS.gene029676:CDS |
| TGGGGAGACGGGATTTAGGG+AGG | 0.402874 | 5.4:-37980578 | MS.gene029676:CDS |
| CGGGGTTGAAACGATCTGTT+CGG | 0.410422 | 5.4:-37980603 | MS.gene029676:CDS |
| TTGTGTGCTTGGCATGGAAT+TGG | 0.413437 | 5.4:-37981088 | MS.gene029676:CDS |
| TTCAGCATGCACTTGGAAAT+GGG | 0.413808 | 5.4:-37979748 | MS.gene029676:CDS |
| ACCGATAAGGGTTGTGTGCT+TGG | 0.414023 | 5.4:-37981099 | MS.gene029676:CDS |
| CCTTGATGTGATGAAACTTA+TGG | 0.418417 | 5.4:-37980809 | MS.gene029676:CDS |
| GTCGAGCTTCCCGGTTGCTT+CGG | 0.419259 | 5.4:-37980362 | MS.gene029676:CDS |
| AGACAAGCCTCTCGAATCAT+TGG | 0.420945 | 5.4:+37980064 | None:intergenic |
| ATCTGTTCGGGTTGGGGAGA+CGG | 0.423694 | 5.4:-37980590 | MS.gene029676:CDS |
| AGGTTGTTTGTTTGGAGGCA+AGG | 0.426134 | 5.4:-37979916 | MS.gene029676:CDS |
| AGACAGAGCCCATGATCAAT+AGG | 0.433939 | 5.4:+37980223 | None:intergenic |
| TGCTGGATATCCCTCCCAGT+TGG | 0.434243 | 5.4:+37980877 | None:intergenic |
| ATACGATGCACCGAAGCAAC+CGG | 0.435535 | 5.4:+37980352 | None:intergenic |
| TTTGATATTGATTGCGATGA+AGG | 0.436204 | 5.4:-37979827 | MS.gene029676:CDS |
| TCTGTTCGGGTTGGGGAGAC+GGG | 0.437991 | 5.4:-37980589 | MS.gene029676:CDS |
| TGAGAGCATTGAGGAGGAAG+AGG | 0.438129 | 5.4:-37979696 | MS.gene029676:CDS |
| GTTTCAAGAGTTGCTGTATC+CGG | 0.439521 | 5.4:-37979408 | MS.gene029676:CDS |
| AGCCCACCATTAACAGGAAC+CGG | 0.441803 | 5.4:+37980748 | None:intergenic |
| GAGCTAATTCCTATTGATCA+TGG | 0.442901 | 5.4:-37980232 | MS.gene029676:CDS |
| GTAAGAGAACTCTCTTCAAC+AGG | 0.443142 | 5.4:+37981009 | None:intergenic |
| TGCTAACAAGTCTCTTTCTC+CGG | 0.444378 | 5.4:+37980443 | None:intergenic |
| GGGGTTGAAACGATCTGTTC+GGG | 0.447342 | 5.4:-37980602 | MS.gene029676:CDS |
| AATGTCAATGATGAGGTCAA+TGG | 0.447940 | 5.4:-37980475 | MS.gene029676:CDS |
| GCACACAACCCTTATCGGTT+TGG | 0.448229 | 5.4:+37981103 | None:intergenic |
| GAAACGATCTGTTCGGGTTG+GGG | 0.450439 | 5.4:-37980596 | MS.gene029676:CDS |
| CTGCCTCTGCTTCTGTCCTA+AGG | 0.450532 | 5.4:+37979361 | None:intergenic |
| ATTGTGAAGGCGATTAAGAT+GGG | 0.451455 | 5.4:-37980778 | MS.gene029676:CDS |
| CAGATATGACTGAGGATGAT+TGG | 0.451467 | 5.4:-37979448 | MS.gene029676:CDS |
| AGAAAAGTTGGTGATGGCAT+TGG | 0.451482 | 5.4:-37980271 | MS.gene029676:CDS |
| GCTCTGTCTGCCAGAAACTT+TGG | 0.451851 | 5.4:-37980209 | MS.gene029676:CDS |
| TTAGGGTTATTCGGCGCAAA+AGG | 0.452391 | 5.4:+37980655 | None:intergenic |
| GGTAAAGCTCTTGGCCAGCC+GGG | 0.452804 | 5.4:-37980622 | MS.gene029676:CDS |
| TGGTAAAGCTCTTGGCCAGC+CGG | 0.456316 | 5.4:-37980623 | MS.gene029676:CDS |
| TGATGACTCGTGAGTTCCAC+AGG | 0.460002 | 5.4:-37979964 | MS.gene029676:CDS |
| GACGGGATTTAGGGAGGTTG+CGG | 0.460436 | 5.4:-37980572 | MS.gene029676:CDS |
| CGTGTTCGTCCAAACCGATA+AGG | 0.461183 | 5.4:-37981112 | MS.gene029676:CDS |
| CACTTGGTGAATACATCATC+TGG | 0.465148 | 5.4:-37979524 | MS.gene029676:CDS |
| AAGAGGAAATCTATAACCTT+AGG | 0.467358 | 5.4:-37979377 | MS.gene029676:CDS |
| GAGGAGGATGTTGGCAGAGA+GGG | 0.467522 | 5.4:-37979894 | MS.gene029676:CDS |
| CTCCTTGTTTGTCCCCAACT+GGG | 0.474424 | 5.4:-37980891 | MS.gene029676:CDS |
| ATGTCAATGATGAGGTCAAT+GGG | 0.475286 | 5.4:-37980474 | MS.gene029676:CDS |
| TTCAGTGATACAGTAATCTC+CGG | 0.475464 | 5.4:+37979605 | None:intergenic |
| TCTGGAGGAAAACTGGATAA+TGG | 0.478713 | 5.4:-37979548 | MS.gene029676:CDS |
| GCTGCTCGTTGGCACTCCTA+TGG | 0.482672 | 5.4:+37979501 | None:intergenic |
| GTGTTCGTCCAAACCGATAA+GGG | 0.486721 | 5.4:-37981111 | MS.gene029676:CDS |
| ACAATGTACATACTGTTAAG+AGG | 0.489555 | 5.4:-37981056 | MS.gene029676:CDS |
| TATTGTGAAGGCGATTAAGA+TGG | 0.490069 | 5.4:-37980779 | MS.gene029676:CDS |
| CAAAGCCAGAGGCAACCTGC+TGG | 0.492330 | 5.4:-37981144 | MS.gene029676:CDS |
| GATTTCCTCTTGGCGAATGC+CGG | 0.492812 | 5.4:+37979389 | None:intergenic |
| GATTAAGATGGGGATCGATC+CGG | 0.496887 | 5.4:-37980767 | MS.gene029676:CDS |
| AAGTGATGAGGAGTCCTCTT+GGG | 0.497100 | 5.4:-37981197 | MS.gene029676:CDS |
| ACTTGAGGTTGTTTGTTTGG+AGG | 0.498223 | 5.4:-37979921 | MS.gene029676:CDS |
| TAATGTGCCTCCTACTGCCT+TGG | 0.500216 | 5.4:-37980521 | MS.gene029676:CDS |
| CTCCATTGCCATCTTTGGAG+TGG | 0.501757 | 5.4:+37979793 | None:intergenic |
| TTTGTTTGGAGGCAAGGAGG+AGG | 0.504289 | 5.4:-37979910 | MS.gene029676:CDS |
| CTCTTGGGAGGGAGTATCAT+GGG | 0.505591 | 5.4:-37981182 | MS.gene029676:CDS |
| GAAGTGATGAGGAGTCCTCT+TGG | 0.506034 | 5.4:-37981198 | MS.gene029676:CDS |
| TTGAAACGATCTGTTCGGGT+TGG | 0.510629 | 5.4:-37980598 | MS.gene029676:CDS |
| TTGTTTGTCCCCAACTGGGA+GGG | 0.513060 | 5.4:-37980887 | MS.gene029676:CDS |
| CAAACAACCTCAAGTTCGCT+TGG | 0.513895 | 5.4:+37979929 | None:intergenic |
| CTGGATATCCCTCCCAGTTG+GGG | 0.519889 | 5.4:+37980879 | None:intergenic |
| AGCATCTCACAGTCATGAGC+AGG | 0.522170 | 5.4:+37980100 | None:intergenic |
| AGGATCTAGATCACGGATGT+AGG | 0.523434 | 5.4:+37980120 | None:intergenic |
| CCTCTTGGGAGGGAGTATCA+TGG | 0.525248 | 5.4:-37981183 | MS.gene029676:CDS |
| AAACTCCTCGTCAACAAAAG+AGG | 0.525865 | 5.4:+37980934 | None:intergenic |
| ATCAGACTCCACTCCAAAGA+TGG | 0.527707 | 5.4:-37979801 | MS.gene029676:CDS |
| TTAGTTAGAAAAGTTGGTGA+TGG | 0.527730 | 5.4:-37980277 | MS.gene029676:CDS |
| AAATGATGAAGAATCTCCTC+AGG | 0.527882 | 5.4:-37979669 | MS.gene029676:CDS |
| ATCCGGTTCCTGTTAATGGT+GGG | 0.527973 | 5.4:-37980750 | MS.gene029676:CDS |
| TAGGACAGAAGCAGAGGCAG+AGG | 0.528179 | 5.4:-37979358 | MS.gene029676:CDS |
| TTTGCGCCGAATAACCCTAA+AGG | 0.529650 | 5.4:-37980652 | MS.gene029676:CDS |
| GAGGATGTTGGCAGAGAGGG+AGG | 0.531799 | 5.4:-37979891 | MS.gene029676:CDS |
| AGAGGCTTGTCTCAGAGTGT+TGG | 0.532604 | 5.4:-37980053 | MS.gene029676:CDS |
| GCCTCCTACTGCCTTGGTGA+AGG | 0.534134 | 5.4:-37980515 | MS.gene029676:CDS |
| TTGGCATGGAATTGGATCGC+GGG | 0.534252 | 5.4:-37981080 | MS.gene029676:CDS |
| TAAGGTTATAGATTTCCTCT+TGG | 0.535338 | 5.4:+37979379 | None:intergenic |
| CTGTCTGCCAGAAACTTTGG+AGG | 0.540526 | 5.4:-37980206 | MS.gene029676:CDS |
| CTCTCATCCAATTTGGAGAG+TGG | 0.540685 | 5.4:+37979713 | None:intergenic |
| CACTCCAAAGATGGCAATGG+AGG | 0.542341 | 5.4:-37979792 | MS.gene029676:CDS |
| GGAGGCAAGGAGGAGGATGT+TGG | 0.542833 | 5.4:-37979903 | MS.gene029676:CDS |
| AACACGCGTCTCCTCCCAGC+AGG | 0.547617 | 5.4:+37981129 | None:intergenic |
| CAGAAGCAGAGGCAGAGGCT+TGG | 0.547858 | 5.4:-37979353 | MS.gene029676:CDS |
| CCATAAGTTTCATCACATCA+AGG | 0.549621 | 5.4:+37980809 | None:intergenic |
| GAGCATTGAGGAGGAAGAGG+AGG | 0.550253 | 5.4:-37979693 | MS.gene029676:CDS |
| TGGGAGGGATATCCAGCAAA+GGG | 0.553902 | 5.4:-37980872 | MS.gene029676:CDS |
| CAGATCGTTTCAACCCCGGC+TGG | 0.555035 | 5.4:+37980608 | None:intergenic |
| TTGTTTGTTTGGAGGCAAGG+AGG | 0.558009 | 5.4:-37979913 | MS.gene029676:CDS |
| AGCTAATTCCTATTGATCAT+GGG | 0.562986 | 5.4:-37980231 | MS.gene029676:CDS |
| GATCCGGTTCCTGTTAATGG+TGG | 0.572205 | 5.4:-37980751 | MS.gene029676:CDS |
| CTTAACACAGATAGACATGC+TGG | 0.572709 | 5.4:-37980307 | MS.gene029676:CDS |
| CTCCCAGTTGGGGACAAACA+AGG | 0.576176 | 5.4:+37980889 | None:intergenic |
| AAAGCCAGAGGCAACCTGCT+GGG | 0.577393 | 5.4:-37981143 | MS.gene029676:CDS |
| GCTTGCAGGAAGCTGCTCGT+TGG | 0.579262 | 5.4:+37979490 | None:intergenic |
| CTTGTTTGTCCCCAACTGGG+AGG | 0.579667 | 5.4:-37980888 | MS.gene029676:CDS |
| TGAGTTCCACAGGGGTGAAG+AGG | 0.586182 | 5.4:-37979954 | MS.gene029676:CDS |
| TGAATACATCATCTGGCCAT+AGG | 0.587415 | 5.4:-37979517 | MS.gene029676:CDS |
| TGGCATGGAATTGGATCGCG+GGG | 0.587761 | 5.4:-37981079 | MS.gene029676:CDS |
| GTAAAGCTCTTGGCCAGCCG+GGG | 0.588642 | 5.4:-37980621 | MS.gene029676:CDS |
| AATCATTTCGAACAGCACTA+AGG | 0.588924 | 5.4:+37980959 | None:intergenic |
| TCTCATCCAATTTGGAGAGT+GGG | 0.590594 | 5.4:+37979714 | None:intergenic |
| CTCCACTCCAAAGATGGCAA+TGG | 0.591929 | 5.4:-37979795 | MS.gene029676:CDS |
| ACTATCTCCAAGAACTGAGG+TGG | 0.593399 | 5.4:-37979867 | MS.gene029676:CDS |
| AAAACTGGATAATGGTCACT+TGG | 0.595677 | 5.4:-37979540 | MS.gene029676:CDS |
| CTTGGCATGGAATTGGATCG+CGG | 0.599942 | 5.4:-37981081 | MS.gene029676:CDS |
| TGATGAGGAGTCCTCTTGGG+AGG | 0.600340 | 5.4:-37981194 | MS.gene029676:CDS |
| TGTGATGAAACTTATGGCTA+AGG | 0.600996 | 5.4:-37980803 | MS.gene029676:CDS |
| ACCTTCACCAAGGCAGTAGG+AGG | 0.604659 | 5.4:+37980514 | None:intergenic |
| TAAGGGTTGTGTGCTTGGCA+TGG | 0.606790 | 5.4:-37981094 | MS.gene029676:CDS |
| TACGATGCACCGAAGCAACC+GGG | 0.606809 | 5.4:+37980353 | None:intergenic |
| TTTCATCACATCAAGGCGTG+TGG | 0.611713 | 5.4:+37980816 | None:intergenic |
| TGACTGTGAGATGCTTCGAA+TGG | 0.612064 | 5.4:-37980092 | MS.gene029676:CDS |
| AGAGGAGCCAAGCGAACTTG+AGG | 0.613483 | 5.4:-37979936 | MS.gene029676:CDS |
| CAAATTGGATGAGAGCATTG+AGG | 0.615364 | 5.4:-37979705 | MS.gene029676:CDS |
| GGAGGAGGATGTTGGCAGAG+AGG | 0.617952 | 5.4:-37979895 | MS.gene029676:CDS |
| GATCTTCAATGTCAATGATG+AGG | 0.619613 | 5.4:-37980482 | MS.gene029676:CDS |
| CTATCTCCAAGAACTGAGGT+GGG | 0.621633 | 5.4:-37979866 | MS.gene029676:CDS |
| CTGGGAGGGATATCCAGCAA+AGG | 0.625870 | 5.4:-37980873 | MS.gene029676:CDS |
| TAACCTTAGGACAGAAGCAG+AGG | 0.626356 | 5.4:-37979364 | MS.gene029676:CDS |
| GATGAGGAGTCCTCTTGGGA+GGG | 0.628291 | 5.4:-37981193 | MS.gene029676:CDS |
| AGATGGCAGTTGAAGTGATG+AGG | 0.628913 | 5.4:-37981209 | MS.gene029676:CDS |
| CATGAGCAGGATCTAGATCA+CGG | 0.637055 | 5.4:+37980113 | None:intergenic |
| TATGGCTAAGGATATTGTGA+AGG | 0.638957 | 5.4:-37980791 | MS.gene029676:CDS |
| CCATGATACTCCCTCCCAAG+AGG | 0.644125 | 5.4:+37981183 | None:intergenic |
| GCAAAAGGCTCCTCATCAGT+CGG | 0.647567 | 5.4:+37980670 | None:intergenic |
| AGAGTCAGAATCAAAGCCAG+AGG | 0.650036 | 5.4:-37981155 | MS.gene029676:CDS |
| GGAGCTGCCAATGATTCGAG+AGG | 0.651572 | 5.4:-37980071 | MS.gene029676:CDS |
| TGTATCCGGCATTCGCCAAG+AGG | 0.652283 | 5.4:-37979394 | MS.gene029676:CDS |
| GTAACCTTCACCAAGGCAGT+AGG | 0.654890 | 5.4:+37980511 | None:intergenic |
| CGAACAGATCGTTTCAACCC+CGG | 0.656066 | 5.4:+37980604 | None:intergenic |
| GATGACTCGTGAGTTCCACA+GGG | 0.671288 | 5.4:-37979963 | MS.gene029676:CDS |
| GTGGTCCTATTGAAATATTG+GGG | 0.672980 | 5.4:-37980843 | MS.gene029676:CDS |
| ATTGGATGAGAGCATTGAGG+AGG | 0.673893 | 5.4:-37979702 | MS.gene029676:CDS |
| TTGTGAAGGCGATTAAGATG+GGG | 0.677942 | 5.4:-37980777 | MS.gene029676:CDS |
| TTGGCTCCTCTTCACCCCTG+TGG | 0.684421 | 5.4:+37979948 | None:intergenic |
| GCCAGAGGCAACCTGCTGGG+AGG | 0.686395 | 5.4:-37981140 | MS.gene029676:CDS |
| TATTGTGAAACCGACTGATG+AGG | 0.694029 | 5.4:-37980680 | MS.gene029676:CDS |
| ATGTACATACTGTTAAGAGG+AGG | 0.703896 | 5.4:-37981053 | MS.gene029676:CDS |
| ATCCAGCAAAGGGATAAGAG+TGG | 0.705880 | 5.4:-37980862 | MS.gene029676:CDS |
| GGAACTATCTCCAAGAACTG+AGG | 0.706344 | 5.4:-37979870 | MS.gene029676:CDS |
| CGAGTGAGTAACCTTCACCA+AGG | 0.723759 | 5.4:+37980504 | None:intergenic |
| AATGCTTGCAGATATGACTG+AGG | 0.771616 | 5.4:-37979456 | MS.gene029676:CDS |
| ATGACTCGTGAGTTCCACAG+GGG | 0.801229 | 5.4:-37979962 | MS.gene029676:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATTTTAGGGATTGTAAT+GGG | - | chr5.4:37979827-37979846 | MS.gene029676:CDS | 20.0% |
| !!! | TATTATTTTAGGGATTGTAA+TGG | - | chr5.4:37979826-37979845 | MS.gene029676:CDS | 20.0% |
| ! | GTATAGGGATATTAGATATT+AGG | - | chr5.4:37980208-37980227 | MS.gene029676:CDS | 25.0% |
| ! | TGAAAAGTTTCTCTGATTAA+AGG | + | chr5.4:37980777-37980796 | None:intergenic | 25.0% |
| !!! | AACTTGTTAGTTAGAAAAGT+TGG | - | chr5.4:37980258-37980277 | MS.gene029676:CDS | 25.0% |
| !!! | TTATTTTAGGGATTGTAATG+GGG | - | chr5.4:37979828-37979847 | MS.gene029676:CDS | 25.0% |
| AAGAGGAAATCTATAACCTT+AGG | - | chr5.4:37981164-37981183 | MS.gene029676:CDS | 30.0% | |
| ACAATGTACATACTGTTAAG+AGG | - | chr5.4:37979485-37979504 | MS.gene029676:CDS | 30.0% | |
| AGAAAAAGTTGCAACTATTC+CGG | - | chr5.4:37980917-37980936 | MS.gene029676:CDS | 30.0% | |
| AGCTAATTCCTATTGATCAT+GGG | - | chr5.4:37980310-37980329 | MS.gene029676:CDS | 30.0% | |
| AGTGGTCCTATTGAAATATT+GGG | - | chr5.4:37979697-37979716 | MS.gene029676:CDS | 30.0% | |
| CAATGAATCCACTCAAAATA+AGG | + | chr5.4:37980363-37980382 | None:intergenic | 30.0% | |
| CTTTACCAACAAAACCTTTA+GGG | + | chr5.4:37979906-37979925 | None:intergenic | 30.0% | |
| TAAGGTTATAGATTTCCTCT+TGG | + | chr5.4:37981165-37981184 | None:intergenic | 30.0% | |
| ! | TTTGATATTGATTGCGATGA+AGG | - | chr5.4:37980714-37980733 | MS.gene029676:CDS | 30.0% |
| !! | AATAACCCTAAAGGTTTTGT+TGG | - | chr5.4:37979898-37979917 | MS.gene029676:CDS | 30.0% |
| !! | ACAAAACCTTTAGGGTTATT+CGG | + | chr5.4:37979898-37979917 | None:intergenic | 30.0% |
| !! | TTAGTTAGAAAAGTTGGTGA+TGG | - | chr5.4:37980264-37980283 | MS.gene029676:CDS | 30.0% |
| !! | TTCTCTTACTTTTGGTGATA+TGG | - | chr5.4:37979546-37979565 | MS.gene029676:CDS | 30.0% |
| !!! | CTTATTTTGAGTGGATTCAT+TGG | - | chr5.4:37980361-37980380 | MS.gene029676:CDS | 30.0% |
| AAATGATGAAGAATCTCCTC+AGG | - | chr5.4:37980872-37980891 | MS.gene029676:CDS | 35.0% | |
| AATCATTTCGAACAGCACTA+AGG | + | chr5.4:37979585-37979604 | None:intergenic | 35.0% | |
| AATGTCAATGATGAGGTCAA+TGG | - | chr5.4:37980066-37980085 | MS.gene029676:CDS | 35.0% | |
| ATGTACATACTGTTAAGAGG+AGG | - | chr5.4:37979488-37979507 | MS.gene029676:CDS | 35.0% | |
| ATGTCAATGATGAGGTCAAT+GGG | - | chr5.4:37980067-37980086 | MS.gene029676:CDS | 35.0% | |
| ATTGTGAAGGCGATTAAGAT+GGG | - | chr5.4:37979763-37979782 | MS.gene029676:CDS | 35.0% | |
| CCATAAGTTTCATCACATCA+AGG | + | chr5.4:37979735-37979754 | None:intergenic | 35.0% | |
| CCTTGATGTGATGAAACTTA+TGG | - | chr5.4:37979732-37979751 | MS.gene029676:CDS | 35.0% | |
| GAGCTAATTCCTATTGATCA+TGG | - | chr5.4:37980309-37980328 | MS.gene029676:CDS | 35.0% | |
| GAGTGGTCCTATTGAAATAT+TGG | - | chr5.4:37979696-37979715 | MS.gene029676:CDS | 35.0% | |
| GATCTTCAATGTCAATGATG+AGG | - | chr5.4:37980059-37980078 | MS.gene029676:CDS | 35.0% | |
| GATTGCCCCAATATTTCAAT+AGG | + | chr5.4:37979706-37979725 | None:intergenic | 35.0% | |
| GCTTTACCAACAAAACCTTT+AGG | + | chr5.4:37979907-37979926 | None:intergenic | 35.0% | |
| GTGGTCCTATTGAAATATTG+GGG | - | chr5.4:37979698-37979717 | MS.gene029676:CDS | 35.0% | |
| TATGGCTAAGGATATTGTGA+AGG | - | chr5.4:37979750-37979769 | MS.gene029676:CDS | 35.0% | |
| TATTGTGAAGGCGATTAAGA+TGG | - | chr5.4:37979762-37979781 | MS.gene029676:CDS | 35.0% | |
| TGTGATGAAACTTATGGCTA+AGG | - | chr5.4:37979738-37979757 | MS.gene029676:CDS | 35.0% | |
| TTCAGTGATACAGTAATCTC+CGG | + | chr5.4:37980939-37980958 | None:intergenic | 35.0% | |
| ! | AAAACTGGATAATGGTCACT+TGG | - | chr5.4:37981001-37981020 | MS.gene029676:CDS | 35.0% |
| ! | GAAGAGAGTTCTCTTACTTT+TGG | - | chr5.4:37979538-37979557 | MS.gene029676:CDS | 35.0% |
| ! | TTCGATTCCTTTTTCTGATG+AGG | - | chr5.4:37980392-37980411 | MS.gene029676:CDS | 35.0% |
| !! | GATTTTGATGCTAGTGATCA+TGG | - | chr5.4:37980153-37980172 | MS.gene029676:CDS | 35.0% |
| !! | TGGAGGTGCGTATTATTTTA+GGG | - | chr5.4:37979816-37979835 | MS.gene029676:CDS | 35.0% |
| !! | TTGGAGGTGCGTATTATTTT+AGG | - | chr5.4:37979815-37979834 | MS.gene029676:CDS | 35.0% |
| !!! | AGAGTGTTTCTGCTTTTTCT+CGG | + | chr5.4:37980976-37980995 | None:intergenic | 35.0% |
| AAAAAGCAGAAACACTCTGG+AGG | - | chr5.4:37980978-37980997 | MS.gene029676:CDS | 40.0% | |
| AAACTCCTCGTCAACAAAAG+AGG | + | chr5.4:37979610-37979629 | None:intergenic | 40.0% | |
| AATGCTTGCAGATATGACTG+AGG | - | chr5.4:37981085-37981104 | MS.gene029676:CDS | 40.0% | |
| ACTTGAGGTTGTTTGTTTGG+AGG | - | chr5.4:37980620-37980639 | MS.gene029676:CDS | 40.0% | |
| AGGTCAATGGGAATTGTTTC+CGG | - | chr5.4:37980079-37980098 | MS.gene029676:CDS | 40.0% | |
| ATTACGAAGCTTATGCTTGC+AGG | + | chr5.4:37981068-37981087 | None:intergenic | 40.0% | |
| CAGATATGACTGAGGATGAT+TGG | - | chr5.4:37981093-37981112 | MS.gene029676:CDS | 40.0% | |
| CGAACTTGAGGTTGTTTGTT+TGG | - | chr5.4:37980617-37980636 | MS.gene029676:CDS | 40.0% | |
| CTCAATGCTCTCATCCAATT+TGG | + | chr5.4:37980838-37980857 | None:intergenic | 40.0% | |
| CTTAACACAGATAGACATGC+TGG | - | chr5.4:37980234-37980253 | MS.gene029676:CDS | 40.0% | |
| GAAAAAGGAATCGAAGCTTG+AGG | + | chr5.4:37980387-37980406 | None:intergenic | 40.0% | |
| GAAGAATCTCCTCAGGAATT+TGG | - | chr5.4:37980879-37980898 | MS.gene029676:CDS | 40.0% | |
| GAGAAAAAGCAGAAACACTC+TGG | - | chr5.4:37980975-37980994 | MS.gene029676:CDS | 40.0% | |
| GTAAGAGAACTCTCTTCAAC+AGG | + | chr5.4:37979535-37979554 | None:intergenic | 40.0% | |
| GTTTCAAGAGTTGCTGTATC+CGG | - | chr5.4:37981133-37981152 | MS.gene029676:CDS | 40.0% | |
| TAAGGATCCTCCAAAGTTTC+TGG | + | chr5.4:37980345-37980364 | None:intergenic | 40.0% | |
| TATTGTGAAACCGACTGATG+AGG | - | chr5.4:37979861-37979880 | MS.gene029676:CDS | 40.0% | |
| TCTCATCCAATTTGGAGAGT+GGG | + | chr5.4:37980830-37980849 | None:intergenic | 40.0% | |
| TCTGGAGGAAAACTGGATAA+TGG | - | chr5.4:37980993-37981012 | MS.gene029676:CDS | 40.0% | |
| TGAATACATCATCTGGCCAT+AGG | - | chr5.4:37981024-37981043 | MS.gene029676:CDS | 40.0% | |
| TGCTAACAAGTCTCTTTCTC+CGG | + | chr5.4:37980101-37980120 | None:intergenic | 40.0% | |
| TTCAGCATGCACTTGGAAAT+GGG | - | chr5.4:37980793-37980812 | MS.gene029676:CDS | 40.0% | |
| TTGTGAAGGCGATTAAGATG+GGG | - | chr5.4:37979764-37979783 | MS.gene029676:CDS | 40.0% | |
| TTTCAGCATGCACTTGGAAA+TGG | - | chr5.4:37980792-37980811 | MS.gene029676:CDS | 40.0% | |
| ! | AGCAGCCTCTTTGAGAAAAA+TGG | + | chr5.4:37980523-37980542 | None:intergenic | 40.0% |
| ! | CACTTGGTGAATACATCATC+TGG | - | chr5.4:37981017-37981036 | MS.gene029676:CDS | 40.0% |
| ! | GAAACTTTTCAGCATGCACT+TGG | - | chr5.4:37980786-37980805 | MS.gene029676:CDS | 40.0% |
| !! | AGAAAAGTTGGTGATGGCAT+TGG | - | chr5.4:37980270-37980289 | MS.gene029676:CDS | 40.0% |
| !! | ATGGCATTGGAACTTTTGGT+CGG | - | chr5.4:37980283-37980302 | MS.gene029676:CDS | 40.0% |
| !! | CAAATTGGATGAGAGCATTG+AGG | - | chr5.4:37980836-37980855 | MS.gene029676:CDS | 40.0% |
| !! | CTGCACCATTTTTCTCAAAG+AGG | - | chr5.4:37980515-37980534 | MS.gene029676:CDS | 40.0% |
| !! | GAAAAAGCACCAAATTCCTG+AGG | + | chr5.4:37980891-37980910 | None:intergenic | 40.0% |
| !!! | GGTTTTGTTGGTAAAGCTCT+TGG | - | chr5.4:37979910-37979929 | MS.gene029676:CDS | 40.0% |
| !!! | TGGAGGATCCTTATTTTGAG+TGG | - | chr5.4:37980352-37980371 | MS.gene029676:CDS | 40.0% |
| AAGTGATGAGGAGTCCTCTT+GGG | - | chr5.4:37979344-37979363 | MS.gene029676:CDS | 45.0% | |
| ACTATCTCCAAGAACTGAGG+TGG | - | chr5.4:37980674-37980693 | MS.gene029676:CDS | 45.0% | |
| AGACAAGCCTCTCGAATCAT+TGG | + | chr5.4:37980480-37980499 | None:intergenic | 45.0% | |
| AGACAGAGCCCATGATCAAT+AGG | + | chr5.4:37980321-37980340 | None:intergenic | 45.0% | |
| AGAGTCAGAATCAAAGCCAG+AGG | - | chr5.4:37979386-37979405 | MS.gene029676:CDS | 45.0% | |
| AGGATCTAGATCACGGATGT+AGG | + | chr5.4:37980424-37980443 | None:intergenic | 45.0% | |
| AGGTTGTTTGTTTGGAGGCA+AGG | - | chr5.4:37980625-37980644 | MS.gene029676:CDS | 45.0% | |
| ATCAGACTCCACTCCAAAGA+TGG | - | chr5.4:37980740-37980759 | MS.gene029676:CDS | 45.0% | |
| ATCCAGCAAAGGGATAAGAG+TGG | - | chr5.4:37979679-37979698 | MS.gene029676:CDS | 45.0% | |
| ATCCGGTTCCTGTTAATGGT+GGG | - | chr5.4:37979791-37979810 | MS.gene029676:CDS | 45.0% | |
| ATCGATCCGGTTCCTGTTAA+TGG | - | chr5.4:37979787-37979806 | MS.gene029676:CDS | 45.0% | |
| CAAACAACCTCAAGTTCGCT+TGG | + | chr5.4:37980615-37980634 | None:intergenic | 45.0% | |
| CATGAGCAGGATCTAGATCA+CGG | + | chr5.4:37980431-37980450 | None:intergenic | 45.0% | |
| CTATCTCCAAGAACTGAGGT+GGG | - | chr5.4:37980675-37980694 | MS.gene029676:CDS | 45.0% | |
| CTCAAAGAGGCTGCTGAATT+TGG | - | chr5.4:37980528-37980547 | MS.gene029676:CDS | 45.0% | |
| CTCTCATCCAATTTGGAGAG+TGG | + | chr5.4:37980831-37980850 | None:intergenic | 45.0% | |
| GATTAAGATGGGGATCGATC+CGG | - | chr5.4:37979774-37979793 | MS.gene029676:CDS | 45.0% | |
| GCAAGCTCCTCATCAGAAAA+AGG | + | chr5.4:37980402-37980421 | None:intergenic | 45.0% | |
| GGAACTATCTCCAAGAACTG+AGG | - | chr5.4:37980671-37980690 | MS.gene029676:CDS | 45.0% | |
| GGTCTCTGTCTTGCTGAAAT+TGG | - | chr5.4:37980549-37980568 | MS.gene029676:CDS | 45.0% | |
| GTGTTCGTCCAAACCGATAA+GGG | - | chr5.4:37979430-37979449 | MS.gene029676:CDS | 45.0% | |
| TAACCTTAGGACAGAAGCAG+AGG | - | chr5.4:37981177-37981196 | MS.gene029676:CDS | 45.0% | |
| TGACTGTGAGATGCTTCGAA+TGG | - | chr5.4:37980449-37980468 | MS.gene029676:CDS | 45.0% | |
| TTAGGGTTATTCGGCGCAAA+AGG | + | chr5.4:37979889-37979908 | None:intergenic | 45.0% | |
| TTGAAACGATCTGTTCGGGT+TGG | - | chr5.4:37979943-37979962 | MS.gene029676:CDS | 45.0% | |
| TTGTGTGCTTGGCATGGAAT+TGG | - | chr5.4:37979453-37979472 | MS.gene029676:CDS | 45.0% | |
| TTGTTTGTTTGGAGGCAAGG+AGG | - | chr5.4:37980628-37980647 | MS.gene029676:CDS | 45.0% | |
| TTTCATCACATCAAGGCGTG+TGG | + | chr5.4:37979728-37979747 | None:intergenic | 45.0% | |
| TTTGCGCCGAATAACCCTAA+AGG | - | chr5.4:37979889-37979908 | MS.gene029676:CDS | 45.0% | |
| ! | ATTCGCCTCTTTTGTTGACG+AGG | - | chr5.4:37979602-37979621 | MS.gene029676:CDS | 45.0% |
| ! | GAAACACTCTGGAGGAAAAC+TGG | - | chr5.4:37980986-37981005 | MS.gene029676:CDS | 45.0% |
| ! | TGAAACGATCTGTTCGGGTT+GGG | - | chr5.4:37979944-37979963 | MS.gene029676:CDS | 45.0% |
| ! | TTGCTTCGGTGCATCGTATA+GGG | - | chr5.4:37980193-37980212 | MS.gene029676:CDS | 45.0% |
| !! | ATTGGATGAGAGCATTGAGG+AGG | - | chr5.4:37980839-37980858 | MS.gene029676:CDS | 45.0% |
| !! | GGTGATGGCATTGGAACTTT+TGG | - | chr5.4:37980279-37980298 | MS.gene029676:CDS | 45.0% |
| !! | TGGCATTGGAACTTTTGGTC+GGG | - | chr5.4:37980284-37980303 | MS.gene029676:CDS | 45.0% |
| !!! | CTGCTTTTTCTCGGCTAACA+TGG | + | chr5.4:37980967-37980986 | None:intergenic | 45.0% |
| ACCGATAAGGGTTGTGTGCT+TGG | - | chr5.4:37979442-37979461 | MS.gene029676:CDS | 50.0% | |
| AGAGGCTTGTCTCAGAGTGT+TGG | - | chr5.4:37980488-37980507 | MS.gene029676:CDS | 50.0% | |
| AGCATCTCACAGTCATGAGC+AGG | + | chr5.4:37980444-37980463 | None:intergenic | 50.0% | |
| AGCCCACCATTAACAGGAAC+CGG | + | chr5.4:37979796-37979815 | None:intergenic | 50.0% | |
| ATACGATGCACCGAAGCAAC+CGG | + | chr5.4:37980192-37980211 | None:intergenic | 50.0% | |
| ATGACTCGTGAGTTCCACAG+GGG | - | chr5.4:37980579-37980598 | MS.gene029676:CDS | 50.0% | |
| CACTCCAAAGATGGCAATGG+AGG | - | chr5.4:37980749-37980768 | MS.gene029676:CDS | 50.0% | |
| CGAACAGATCGTTTCAACCC+CGG | + | chr5.4:37979940-37979959 | None:intergenic | 50.0% | |
| CGAGTGAGTAACCTTCACCA+AGG | + | chr5.4:37980040-37980059 | None:intergenic | 50.0% | |
| CGGGGTTGAAACGATCTGTT+CGG | - | chr5.4:37979938-37979957 | MS.gene029676:CDS | 50.0% | |
| CGTGTTCGTCCAAACCGATA+AGG | - | chr5.4:37979429-37979448 | MS.gene029676:CDS | 50.0% | |
| CTCCACTCCAAAGATGGCAA+TGG | - | chr5.4:37980746-37980765 | MS.gene029676:CDS | 50.0% | |
| CTGTCTGCCAGAAACTTTGG+AGG | - | chr5.4:37980335-37980354 | MS.gene029676:CDS | 50.0% | |
| CTTGGCATGGAATTGGATCG+CGG | - | chr5.4:37979460-37979479 | MS.gene029676:CDS | 50.0% | |
| GAAGTGATGAGGAGTCCTCT+TGG | - | chr5.4:37979343-37979362 | MS.gene029676:CDS | 50.0% | |
| GACCACTCTTATCCCTTTGC+TGG | + | chr5.4:37979684-37979703 | None:intergenic | 50.0% | |
| GATCCGGTTCCTGTTAATGG+TGG | - | chr5.4:37979790-37979809 | MS.gene029676:CDS | 50.0% | |
| GATGACTCGTGAGTTCCACA+GGG | - | chr5.4:37980578-37980597 | MS.gene029676:CDS | 50.0% | |
| GATTTCCTCTTGGCGAATGC+CGG | + | chr5.4:37981155-37981174 | None:intergenic | 50.0% | |
| GCAAAAGGCTCCTCATCAGT+CGG | + | chr5.4:37979874-37979893 | None:intergenic | 50.0% | |
| GCCAAGCACACAACCCTTAT+CGG | + | chr5.4:37979446-37979465 | None:intergenic | 50.0% | |
| GCTCTGTCTGCCAGAAACTT+TGG | - | chr5.4:37980332-37980351 | MS.gene029676:CDS | 50.0% | |
| GGATCCTCCATTGCCATCTT+TGG | + | chr5.4:37980756-37980775 | None:intergenic | 50.0% | |
| GGGGTTGAAACGATCTGTTC+GGG | - | chr5.4:37979939-37979958 | MS.gene029676:CDS | 50.0% | |
| GTAACCTTCACCAAGGCAGT+AGG | + | chr5.4:37980033-37980052 | None:intergenic | 50.0% | |
| TAAGGGTTGTGTGCTTGGCA+TGG | - | chr5.4:37979447-37979466 | MS.gene029676:CDS | 50.0% | |
| TAATGTGCCTCCTACTGCCT+TGG | - | chr5.4:37980020-37980039 | MS.gene029676:CDS | 50.0% | |
| TGATGACTCGTGAGTTCCAC+AGG | - | chr5.4:37980577-37980596 | MS.gene029676:CDS | 50.0% | |
| TGGGAGGGATATCCAGCAAA+GGG | - | chr5.4:37979669-37979688 | MS.gene029676:CDS | 50.0% | |
| TTGGCATGGAATTGGATCGC+GGG | - | chr5.4:37979461-37979480 | MS.gene029676:CDS | 50.0% | |
| TTGTTTGTCCCCAACTGGGA+GGG | - | chr5.4:37979654-37979673 | MS.gene029676:CDS | 50.0% | |
| TTTGTTTGGAGGCAAGGAGG+AGG | - | chr5.4:37980631-37980650 | MS.gene029676:CDS | 50.0% | |
| ! | ACTCCTTGTTTGTCCCCAAC+TGG | - | chr5.4:37979649-37979668 | MS.gene029676:CDS | 50.0% |
| ! | CATTGGAACTTTTGGTCGGG+TGG | - | chr5.4:37980287-37980306 | MS.gene029676:CDS | 50.0% |
| ! | CTCCATTGCCATCTTTGGAG+TGG | + | chr5.4:37980751-37980770 | None:intergenic | 50.0% |
| ! | CTCCTTGTTTGTCCCCAACT+GGG | - | chr5.4:37979650-37979669 | MS.gene029676:CDS | 50.0% |
| ! | GCACACAACCCTTATCGGTT+TGG | + | chr5.4:37979441-37979460 | None:intergenic | 50.0% |
| ! | GTTGCTTCGGTGCATCGTAT+AGG | - | chr5.4:37980192-37980211 | MS.gene029676:CDS | 50.0% |
| !! | CTCTTGGGAGGGAGTATCAT+GGG | - | chr5.4:37979359-37979378 | MS.gene029676:CDS | 50.0% |
| !! | GAAACGATCTGTTCGGGTTG+GGG | - | chr5.4:37979945-37979964 | MS.gene029676:CDS | 50.0% |
| !! | GTTCCTGTTAATGGTGGGCT+TGG | - | chr5.4:37979796-37979815 | MS.gene029676:CDS | 50.0% |
| !! | TGAGAGCATTGAGGAGGAAG+AGG | - | chr5.4:37980845-37980864 | MS.gene029676:CDS | 50.0% |
| AAAGCCAGAGGCAACCTGCT+GGG | - | chr5.4:37979398-37979417 | MS.gene029676:CDS | 55.0% | |
| ACCTTCACCAAGGCAGTAGG+AGG | + | chr5.4:37980030-37980049 | None:intergenic | 55.0% | |
| AGAGGAGCCAAGCGAACTTG+AGG | - | chr5.4:37980605-37980624 | MS.gene029676:CDS | 55.0% | |
| CCATGATACTCCCTCCCAAG+AGG | + | chr5.4:37979361-37979380 | None:intergenic | 55.0% | |
| CCTCCAAGCCCACCATTAAC+AGG | + | chr5.4:37979802-37979821 | None:intergenic | 55.0% | |
| CTCCCAGTTGGGGACAAACA+AGG | + | chr5.4:37979655-37979674 | None:intergenic | 55.0% | |
| CTGCCTCTGCTTCTGTCCTA+AGG | + | chr5.4:37981183-37981202 | None:intergenic | 55.0% | |
| CTGGATATCCCTCCCAGTTG+GGG | + | chr5.4:37979665-37979684 | None:intergenic | 55.0% | |
| CTGGGAGGGATATCCAGCAA+AGG | - | chr5.4:37979668-37979687 | MS.gene029676:CDS | 55.0% | |
| CTTGTTTGTCCCCAACTGGG+AGG | - | chr5.4:37979653-37979672 | MS.gene029676:CDS | 55.0% | |
| GACGGGATTTAGGGAGGTTG+CGG | - | chr5.4:37979969-37979988 | MS.gene029676:CDS | 55.0% | |
| GAGGAGGATGTTGGCAGAGA+GGG | - | chr5.4:37980647-37980666 | MS.gene029676:CDS | 55.0% | |
| GATGAGGAGTCCTCTTGGGA+GGG | - | chr5.4:37979348-37979367 | MS.gene029676:CDS | 55.0% | |
| GCGTAGCCCACTCTCCAAAT+TGG | - | chr5.4:37980821-37980840 | MS.gene029676:CDS | 55.0% | |
| GCTGGATATCCCTCCCAGTT+GGG | + | chr5.4:37979666-37979685 | None:intergenic | 55.0% | |
| GGAGCTGCCAATGATTCGAG+AGG | - | chr5.4:37980470-37980489 | MS.gene029676:CDS | 55.0% | |
| GGAGGTTGCGGCTTATCTTC+TGG | - | chr5.4:37979981-37980000 | MS.gene029676:CDS | 55.0% | |
| GGTTGGGGAGACGGGATTTA+GGG | - | chr5.4:37979960-37979979 | MS.gene029676:CDS | 55.0% | |
| TACGATGCACCGAAGCAACC+GGG | + | chr5.4:37980191-37980210 | None:intergenic | 55.0% | |
| TAGGACAGAAGCAGAGGCAG+AGG | - | chr5.4:37981183-37981202 | MS.gene029676:CDS | 55.0% | |
| TCATGGTACGTCGAGCTTCC+CGG | - | chr5.4:37980170-37980189 | MS.gene029676:CDS | 55.0% | |
| TCGTCTCCCACCTCAGTTCT+TGG | + | chr5.4:37980684-37980703 | None:intergenic | 55.0% | |
| TGAGTTCCACAGGGGTGAAG+AGG | - | chr5.4:37980587-37980606 | MS.gene029676:CDS | 55.0% | |
| TGATGAGGAGTCCTCTTGGG+AGG | - | chr5.4:37979347-37979366 | MS.gene029676:CDS | 55.0% | |
| TGCTGGATATCCCTCCCAGT+TGG | + | chr5.4:37979667-37979686 | None:intergenic | 55.0% | |
| TGGCATGGAATTGGATCGCG+GGG | - | chr5.4:37979462-37979481 | MS.gene029676:CDS | 55.0% | |
| TGGTAAAGCTCTTGGCCAGC+CGG | - | chr5.4:37979918-37979937 | MS.gene029676:CDS | 55.0% | |
| TGTATCCGGCATTCGCCAAG+AGG | - | chr5.4:37981147-37981166 | MS.gene029676:CDS | 55.0% | |
| !! | ATCTGTTCGGGTTGGGGAGA+CGG | - | chr5.4:37979951-37979970 | MS.gene029676:CDS | 55.0% |
| !! | CCTCTTGGGAGGGAGTATCA+TGG | - | chr5.4:37979358-37979377 | MS.gene029676:CDS | 55.0% |
| !! | CCTGTTAATGGTGGGCTTGG+AGG | - | chr5.4:37979799-37979818 | MS.gene029676:CDS | 55.0% |
| !! | GAGCATTGAGGAGGAAGAGG+AGG | - | chr5.4:37980848-37980867 | MS.gene029676:CDS | 55.0% |
| CAAAGCCAGAGGCAACCTGC+TGG | - | chr5.4:37979397-37979416 | MS.gene029676:CDS | 60.0% | |
| CAGAAGCAGAGGCAGAGGCT+TGG | - | chr5.4:37981188-37981207 | MS.gene029676:CDS | 60.0% | |
| CAGATCGTTTCAACCCCGGC+TGG | + | chr5.4:37979936-37979955 | None:intergenic | 60.0% | |
| GAGGATGTTGGCAGAGAGGG+AGG | - | chr5.4:37980650-37980669 | MS.gene029676:CDS | 60.0% | |
| GCCTCCTACTGCCTTGGTGA+AGG | - | chr5.4:37980026-37980045 | MS.gene029676:CDS | 60.0% | |
| GCTGCTCGTTGGCACTCCTA+TGG | + | chr5.4:37981043-37981062 | None:intergenic | 60.0% | |
| GCTTGCAGGAAGCTGCTCGT+TGG | + | chr5.4:37981054-37981073 | None:intergenic | 60.0% | |
| GGAGGAGGATGTTGGCAGAG+AGG | - | chr5.4:37980646-37980665 | MS.gene029676:CDS | 60.0% | |
| GGAGGCAAGGAGGAGGATGT+TGG | - | chr5.4:37980638-37980657 | MS.gene029676:CDS | 60.0% | |
| GGGTTGGGGAGACGGGATTT+AGG | - | chr5.4:37979959-37979978 | MS.gene029676:CDS | 60.0% | |
| GGTAAAGCTCTTGGCCAGCC+GGG | - | chr5.4:37979919-37979938 | MS.gene029676:CDS | 60.0% | |
| GTAAAGCTCTTGGCCAGCCG+GGG | - | chr5.4:37979920-37979939 | MS.gene029676:CDS | 60.0% | |
| GTCGAGCTTCCCGGTTGCTT+CGG | - | chr5.4:37980179-37980198 | MS.gene029676:CDS | 60.0% | |
| TGGGGAGACGGGATTTAGGG+AGG | - | chr5.4:37979963-37979982 | MS.gene029676:CDS | 60.0% | |
| TTGGCTCCTCTTCACCCCTG+TGG | + | chr5.4:37980596-37980615 | None:intergenic | 60.0% | |
| !! | TCTGTTCGGGTTGGGGAGAC+GGG | - | chr5.4:37979952-37979971 | MS.gene029676:CDS | 60.0% |
| AACACGCGTCTCCTCCCAGC+AGG | + | chr5.4:37979415-37979434 | None:intergenic | 65.0% | |
| TCCTCCCAGCAGGTTGCCTC+TGG | + | chr5.4:37979405-37979424 | None:intergenic | 65.0% | |
| GCCAGAGGCAACCTGCTGGG+AGG | - | chr5.4:37979401-37979420 | MS.gene029676:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 37979334 | 37981229 | 37979334 | ID=MS.gene029676 |
| chr5.4 | mRNA | 37979334 | 37981229 | 37979334 | ID=MS.gene029676.t1;Parent=MS.gene029676 |
| chr5.4 | exon | 37979334 | 37981229 | 37979334 | ID=MS.gene029676.t1.exon1;Parent=MS.gene029676.t1 |
| chr5.4 | CDS | 37979334 | 37981229 | 37979334 | ID=cds.MS.gene029676.t1;Parent=MS.gene029676.t1 |
| Gene Sequence |
| Protein sequence |
