Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61052.t1 | XP_003628725.1 | 97.5 | 641 | 14 | 2 | 1 | 640 | 1 | 640 | 0.00E+00 | 1233.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61052.t1 | Q9SI52 | 68.2 | 666 | 170 | 12 | 1 | 640 | 1 | 650 | 4.9e-247 | 855.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61052.t1 | G7LG87 | 97.5 | 641 | 14 | 2 | 1 | 640 | 1 | 640 | 0.0e+00 | 1233.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049411 | MS.gene61052 | 0.80886 | 2.52E-50 | -1.69E-46 |
| MS.gene055339 | MS.gene61052 | 0.841614 | 4.27E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene71236 | MS.gene61052 | PPI |
| MS.gene61052 | MS.gene038501 | PPI |
| MS.gene029676 | MS.gene61052 | PPI |
| MS.gene58968 | MS.gene61052 | PPI |
| MS.gene66860 | MS.gene61052 | PPI |
| MS.gene61052 | MS.gene62152 | PPI |
| MS.gene009056 | MS.gene61052 | PPI |
| MS.gene038501 | MS.gene61052 | PPI |
| MS.gene62152 | MS.gene61052 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61052.t1 | MTR_8g066090 | 97.504 | 641 | 14 | 2 | 1 | 640 | 1 | 640 | 0.0 | 1286 |
| MS.gene61052.t1 | MTR_0009s0120 | 77.245 | 646 | 135 | 5 | 1 | 640 | 1 | 640 | 0.0 | 984 |
| MS.gene61052.t1 | MTR_7g017360 | 63.272 | 648 | 214 | 11 | 1 | 640 | 1 | 632 | 0.0 | 765 |
| MS.gene61052.t1 | MTR_5g009120 | 39.144 | 327 | 178 | 6 | 134 | 447 | 238 | 556 | 7.07e-63 | 219 |
| MS.gene61052.t1 | MTR_3g091400 | 40.514 | 311 | 156 | 8 | 135 | 425 | 233 | 534 | 1.42e-62 | 218 |
| MS.gene61052.t1 | MTR_8g099565 | 38.701 | 354 | 181 | 10 | 134 | 464 | 251 | 591 | 4.32e-62 | 217 |
| MS.gene61052.t1 | MTR_8g027610 | 40.068 | 292 | 145 | 6 | 150 | 425 | 270 | 547 | 8.09e-62 | 216 |
| MS.gene61052.t1 | MTR_7g117395 | 38.514 | 296 | 152 | 6 | 146 | 425 | 266 | 547 | 5.75e-58 | 206 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61052.t1 | AT2G03890 | 69.219 | 666 | 163 | 12 | 1 | 640 | 1 | 650 | 0.0 | 891 |
| MS.gene61052.t1 | AT1G26270 | 68.837 | 645 | 181 | 9 | 1 | 640 | 1 | 630 | 0.0 | 870 |
| MS.gene61052.t1 | AT1G13640 | 64.615 | 650 | 180 | 12 | 13 | 640 | 1 | 622 | 0.0 | 802 |
| MS.gene61052.t1 | AT1G13640 | 64.615 | 650 | 180 | 12 | 13 | 640 | 1 | 622 | 0.0 | 802 |
| MS.gene61052.t1 | AT2G03890 | 61.667 | 480 | 144 | 10 | 180 | 640 | 72 | 530 | 0.0 | 546 |
| MS.gene61052.t1 | AT2G03890 | 71.845 | 103 | 20 | 3 | 1 | 96 | 1 | 101 | 4.06e-35 | 140 |
| MS.gene61052.t1 | AT2G40850 | 41.273 | 550 | 249 | 16 | 110 | 640 | 67 | 561 | 2.57e-119 | 367 |
| MS.gene61052.t1 | AT3G56600 | 51.724 | 348 | 149 | 4 | 106 | 444 | 48 | 385 | 3.20e-118 | 363 |
| MS.gene61052.t1 | AT3G56600 | 51.724 | 348 | 149 | 4 | 106 | 444 | 51 | 388 | 4.34e-118 | 362 |
| MS.gene61052.t1 | AT3G56600 | 51.724 | 348 | 149 | 4 | 106 | 444 | 51 | 388 | 4.34e-118 | 362 |
| MS.gene61052.t1 | AT5G24240 | 40.240 | 333 | 169 | 8 | 146 | 465 | 242 | 557 | 2.11e-65 | 225 |
| MS.gene61052.t1 | AT5G24240 | 40.240 | 333 | 169 | 8 | 146 | 465 | 242 | 557 | 2.11e-65 | 225 |
| MS.gene61052.t1 | AT2G46500 | 33.621 | 464 | 245 | 12 | 45 | 462 | 115 | 561 | 6.64e-63 | 218 |
| MS.gene61052.t1 | AT2G46500 | 33.621 | 464 | 245 | 12 | 45 | 462 | 115 | 561 | 6.64e-63 | 218 |
| MS.gene61052.t1 | AT2G46500 | 29.766 | 299 | 152 | 10 | 45 | 301 | 115 | 397 | 3.63e-23 | 103 |
| MS.gene61052.t1 | AT1G27570 | 29.237 | 236 | 131 | 10 | 227 | 443 | 399 | 617 | 3.03e-11 | 67.0 |
| MS.gene61052.t1 | AT1G27570 | 29.237 | 236 | 131 | 10 | 227 | 443 | 390 | 608 | 4.39e-11 | 66.6 |
Find 180 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAATGCTTCTGGTATTTC+TGG | 0.020252 | 8.1:-38377251 | None:intergenic |
| CTCAATGCTCTCGTACAATT+TGG | 0.244008 | 8.1:-38377103 | None:intergenic |
| GAAGAGAGCTCTCTAACTTT+TGG | 0.267353 | 8.1:+38375821 | MS.gene61052:CDS |
| CAATGAATCCACTCAAAGTA+TGG | 0.272331 | 8.1:-38376631 | None:intergenic |
| AGATGCATGGACAATGTTTC+TGG | 0.285007 | 8.1:+38377386 | MS.gene61052:CDS |
| GTTAGAAAAGTCGGGGCTTT+TGG | 0.306638 | 8.1:+38376550 | MS.gene61052:CDS |
| AAAGCAGATAATGGATGTTA+TGG | 0.313231 | 8.1:+38377279 | MS.gene61052:CDS |
| AGCAGCCTCCTTCAGGAAAA+TGG | 0.316245 | 8.1:-38376791 | None:intergenic |
| CAGAAATACCAGAAGCATTC+AGG | 0.317205 | 8.1:+38377252 | MS.gene61052:CDS |
| GGGTTGGGGAAACTGGCTTC+AGG | 0.327671 | 8.1:+38376242 | MS.gene61052:CDS |
| TCAGTTCGGGTTGGGGAAAC+TGG | 0.331943 | 8.1:+38376235 | MS.gene61052:CDS |
| AGTCATCATCTCACCAATTT+CGG | 0.333656 | 8.1:-38376833 | None:intergenic |
| TATGGGTCCTCCAAAGCTTC+TGG | 0.334039 | 8.1:-38376613 | None:intergenic |
| AAGCAACAGCCATTTGAGTT+TGG | 0.335402 | 8.1:-38375613 | None:intergenic |
| AGCCCACTATTCACTGGAAT+TGG | 0.339986 | 8.1:-38376076 | None:intergenic |
| GCTTTCTTACATCGAAAATC+TGG | 0.339987 | 8.1:+38376687 | MS.gene61052:CDS |
| GCTGCTTATCTACTTGACTA+TGG | 0.343089 | 8.1:+38376271 | MS.gene61052:CDS |
| CTGTTTCTGACCTATAGTTA+TGG | 0.343217 | 8.1:-38377454 | None:intergenic |
| GCTTTGCCTTCCAGAAGCTT+TGG | 0.355876 | 8.1:+38376603 | MS.gene61052:CDS |
| CTCTCCCTGGACTTGGAAAC+GGG | 0.356675 | 8.1:+38377061 | MS.gene61052:CDS |
| GGTCTGTGCCTTGCCGAAAT+TGG | 0.357724 | 8.1:+38376820 | MS.gene61052:CDS |
| ATACGATGCACAGCAGTAAC+AGG | 0.359255 | 8.1:-38376472 | None:intergenic |
| CATAGGCAGCAGCCTCCTTC+AGG | 0.360950 | 8.1:-38376798 | None:intergenic |
| GTATAGGGATATTAGACATT+AGG | 0.362621 | 8.1:+38376491 | MS.gene61052:CDS |
| TGAAACGTTCAGTTCGGGTT+GGG | 0.364791 | 8.1:+38376227 | MS.gene61052:CDS |
| GTTACTGCTGTGCATCGTAT+AGG | 0.375398 | 8.1:+38376475 | MS.gene61052:CDS |
| GCTTTGCCAACAAAACCTTT+TGG | 0.380074 | 8.1:-38376187 | None:intergenic |
| TTACTGCTGTGCATCGTATA+GGG | 0.381515 | 8.1:+38376476 | MS.gene61052:CDS |
| GATTTAATTCCTATTGATCA+TGG | 0.388146 | 8.1:+38376580 | MS.gene61052:CDS |
| CAGGTTTGAAACGTTCAGTT+CGG | 0.388270 | 8.1:+38376221 | MS.gene61052:CDS |
| GTGTGTATTGGGCATGGAAT+TGG | 0.388380 | 8.1:+38375736 | MS.gene61052:CDS |
| CATACTTTGAGTGGATTCAT+TGG | 0.391075 | 8.1:+38376632 | MS.gene61052:CDS |
| ACTGAAACTGGGTGTGTATT+GGG | 0.393077 | 8.1:+38375725 | MS.gene61052:CDS |
| TTGCCTTCCAGAAGCTTTGG+AGG | 0.400314 | 8.1:+38376606 | MS.gene61052:CDS |
| CTCTCGTACAATTTGGAGAA+TGG | 0.400704 | 8.1:-38377096 | None:intergenic |
| TCAGTTTCTCTCCCTGGACT+TGG | 0.403434 | 8.1:+38377054 | MS.gene61052:CDS |
| TCTGTTGATGTCTCGTAAAT+CGG | 0.405325 | 8.1:+38375580 | None:intergenic |
| GAAGGAACTGCCTATGATTC+GGG | 0.405810 | 8.1:+38376738 | MS.gene61052:CDS |
| TCTCTCCCTGGACTTGGAAA+CGG | 0.412632 | 8.1:+38377060 | MS.gene61052:CDS |
| AAGTTCAAGCTTTGTGAAGC+TGG | 0.413490 | 8.1:+38377350 | MS.gene61052:CDS |
| AGTGGTCCTATTGAGATAGT+AGG | 0.413897 | 8.1:+38375980 | MS.gene61052:CDS |
| TCAGGTGGAAAAGCAGATAA+TGG | 0.414362 | 8.1:+38377270 | MS.gene61052:CDS |
| AAGAGGAAATCCATAACTAT+AGG | 0.417543 | 8.1:+38377444 | MS.gene61052:CDS |
| ACAAACAACCTCCAGTTCAC+TGG | 0.419347 | 8.1:-38376884 | None:intergenic |
| GTATTGCTCATCTTCAAAAC+TGG | 0.422923 | 8.1:-38377500 | None:intergenic |
| AAGCAAGCCTCCCGAATCAT+AGG | 0.426402 | 8.1:-38376748 | None:intergenic |
| CGAACTGAACGTTTCAAACC+TGG | 0.427079 | 8.1:-38376220 | None:intergenic |
| AGGCAAAGCCCATGATCAAT+AGG | 0.427118 | 8.1:-38376589 | None:intergenic |
| AGAGAAACTGATCTGGTTAG+AGG | 0.430381 | 8.1:-38377042 | None:intergenic |
| TGAGTGGATTCATTGGCCTC+AGG | 0.430525 | 8.1:+38376639 | MS.gene61052:CDS |
| ATTTGTTAGTTAGAAAAGTC+GGG | 0.431689 | 8.1:+38376542 | MS.gene61052:CDS |
| GGAAGGAACTGCCTATGATT+CGG | 0.436125 | 8.1:+38376737 | MS.gene61052:CDS |
| CTGAAGGAGGCTGCTGCCTA+TGG | 0.439179 | 8.1:+38376799 | MS.gene61052:CDS |
| GATTTCCTCTTGGCAAATGC+CGG | 0.440028 | 8.1:-38377432 | None:intergenic |
| TGCAGAAAGCTGCTGCTCAT+TGG | 0.440402 | 8.1:-38377328 | None:intergenic |
| GATTGCCCTACTATCTCAAT+AGG | 0.443982 | 8.1:-38375986 | None:intergenic |
| CCATTCCCGTTTCCAAGTCC+AGG | 0.445014 | 8.1:-38377066 | None:intergenic |
| AACTGAAACTGGGTGTGTAT+TGG | 0.447347 | 8.1:+38375724 | MS.gene61052:CDS |
| CCTGGATATTATGAAGCATA+TGG | 0.449990 | 8.1:+38376015 | MS.gene61052:CDS |
| GCAAGTGACTATGGGACATC+TGG | 0.450686 | 8.1:+38376445 | MS.gene61052:CDS |
| TATAGTTATGGATTTCCTCT+TGG | 0.450899 | 8.1:-38377442 | None:intergenic |
| ATCTCCACTGACTGACTTGA+GGG | 0.451474 | 8.1:+38376945 | MS.gene61052:CDS |
| TTTGGATTGTTAGGGGCAAA+AGG | 0.455081 | 8.1:-38376169 | None:intergenic |
| AATGTCAACGATGGAGTCAA+TGG | 0.457911 | 8.1:+38376349 | MS.gene61052:CDS |
| ATTCCAGTGAATAGTGGGCT+TGG | 0.464563 | 8.1:+38376079 | MS.gene61052:CDS |
| GATATAGACTGTGATGTAGC+TGG | 0.466536 | 8.1:+38376985 | MS.gene61052:CDS |
| GGTTGGGGAAACTGGCTTCA+GGG | 0.467085 | 8.1:+38376243 | MS.gene61052:CDS |
| TGAGGAGGAACCCAGTGAAC+TGG | 0.469642 | 8.1:+38376873 | MS.gene61052:CDS |
| AAGCAGATAATGGATGTTAT+GGG | 0.472965 | 8.1:+38377280 | MS.gene61052:CDS |
| ACAATGACCTTAGTTCTGTT+CGG | 0.474164 | 8.1:+38375858 | MS.gene61052:CDS |
| TCTCGTACAATTTGGAGAAT+GGG | 0.475346 | 8.1:-38377095 | None:intergenic |
| CATCACAGTCTATATCAAAC+AGG | 0.475913 | 8.1:-38376978 | None:intergenic |
| CAGCCCTGTCCAAACTCAAA+TGG | 0.476458 | 8.1:+38375604 | MS.gene61052:CDS |
| GAAAGCTCATCCTCGGAGAA+TGG | 0.476660 | 8.1:-38376670 | None:intergenic |
| GTACGAGAGCATTGAGGAGG+AGG | 0.476694 | 8.1:+38377110 | MS.gene61052:CDS |
| TGTTATGGGAATACATCATC+TGG | 0.479228 | 8.1:+38377294 | MS.gene61052:CDS |
| TGGATGAACTTCTGTGCATA+AGG | 0.481738 | 8.1:-38375910 | None:intergenic |
| GCTTTATTTCGTAGTCCGCT+TGG | 0.483950 | 8.1:+38375632 | MS.gene61052:CDS |
| ACAGCCATTTGAGTTTGGAC+AGG | 0.485062 | 8.1:-38375608 | None:intergenic |
| TGCTAACCACCTTCTTACTC+TGG | 0.486077 | 8.1:-38376381 | None:intergenic |
| GAAACGTTCAGTTCGGGTTG+GGG | 0.486697 | 8.1:+38376228 | MS.gene61052:CDS |
| ATTGAGGAGGAGGAAGAAGA+AGG | 0.486989 | 8.1:+38377120 | MS.gene61052:CDS |
| TAAGGTTACGCGTAAGAAGA+AGG | 0.487508 | 8.1:-38375892 | None:intergenic |
| GATCCAATTCCAGTGAATAG+TGG | 0.488188 | 8.1:+38376073 | MS.gene61052:CDS |
| AAGGAATATGTTGGCAGAAA+GGG | 0.488308 | 8.1:+38376915 | MS.gene61052:CDS |
| GTTAGAGAGCTCTCTTCAGT+TGG | 0.488845 | 8.1:-38375815 | None:intergenic |
| CCATATGCTTCATAATATCC+AGG | 0.493471 | 8.1:-38376015 | None:intergenic |
| GGCAAAGCTCTTGGACAACC+AGG | 0.494242 | 8.1:+38376202 | MS.gene61052:CDS |
| ACCAGATCAGTTTCTCTCCC+TGG | 0.495779 | 8.1:+38377048 | MS.gene61052:CDS |
| AATTTGTTAGTTAGAAAAGT+CGG | 0.498110 | 8.1:+38376541 | MS.gene61052:CDS |
| CCTGGACTTGGAAACGGGAA+TGG | 0.499054 | 8.1:+38377066 | MS.gene61052:CDS |
| AGGTTTGAAACGTTCAGTTC+GGG | 0.499842 | 8.1:+38376222 | MS.gene61052:CDS |
| ACTCCATGCTTGTCACCCAC+TGG | 0.501468 | 8.1:+38375932 | MS.gene61052:CDS |
| CATTGTGAAGGCAATGCAGA+TGG | 0.505557 | 8.1:+38376045 | MS.gene61052:CDS |
| GAGGAGGAAGAAGAAGGTGA+TGG | 0.508640 | 8.1:+38377126 | MS.gene61052:CDS |
| CAAGGAATATGTTGGCAGAA+AGG | 0.511208 | 8.1:+38376914 | MS.gene61052:CDS |
| ATTTCCTCTTGGCAAATGCC+GGG | 0.512706 | 8.1:-38377431 | None:intergenic |
| TTTGCCCCTAACAATCCAAA+AGG | 0.515576 | 8.1:+38376172 | MS.gene61052:CDS |
| ATTTAATTCCTATTGATCAT+GGG | 0.515719 | 8.1:+38376581 | MS.gene61052:CDS |
| GTTTCAAGAGCTGCTGTACC+CGG | 0.517286 | 8.1:+38377413 | MS.gene61052:CDS |
| CCTCCAAGCCCACTATTCAC+TGG | 0.518053 | 8.1:-38376082 | None:intergenic |
| TTTAGAAGCAAGGAATATGT+TGG | 0.522762 | 8.1:+38376906 | MS.gene61052:CDS |
| CCAGTGAATAGTGGGCTTGG+AGG | 0.525249 | 8.1:+38376082 | MS.gene61052:CDS |
| TTAGAGAGCTCTCTTCAGTT+GGG | 0.526432 | 8.1:-38375814 | None:intergenic |
| AGGTTGTTTGTTTAGAAGCA+AGG | 0.528616 | 8.1:+38376896 | MS.gene61052:CDS |
| CAGCCATTTGAGTTTGGACA+GGG | 0.529127 | 8.1:-38375607 | None:intergenic |
| ATGTCAACGATGGAGTCAAT+GGG | 0.533411 | 8.1:+38376350 | MS.gene61052:CDS |
| TGCTGCATATCTCGTCCAGT+GGG | 0.534004 | 8.1:-38375947 | None:intergenic |
| AACATCTCACAATCTTGAGC+AGG | 0.536201 | 8.1:-38376712 | None:intergenic |
| GTGGTCCTATTGAGATAGTA+GGG | 0.538139 | 8.1:+38375981 | MS.gene61052:CDS |
| TATCATTCCGAACAGAACTA+AGG | 0.539457 | 8.1:-38375865 | None:intergenic |
| TGGAGGACCCATACTTTGAG+TGG | 0.540905 | 8.1:+38376623 | MS.gene61052:CDS |
| TTGAAACGTTCAGTTCGGGT+TGG | 0.541580 | 8.1:+38376226 | MS.gene61052:CDS |
| TTAGGATTCTTAACACGGAC+AGG | 0.542430 | 8.1:+38376509 | MS.gene61052:CDS |
| GCAAAAGGCTCCTCATCTGT+TGG | 0.543208 | 8.1:-38376154 | None:intergenic |
| TATTACTTCCTGAACAAAAG+AGG | 0.545249 | 8.1:+38376109 | MS.gene61052:CDS |
| ACAATGCTCATACTGTGAAA+AGG | 0.547234 | 8.1:+38375768 | MS.gene61052:CDS |
| CGTCCAGTGGGTGACAAGCA+TGG | 0.548654 | 8.1:-38375935 | None:intergenic |
| CAAACAACCTCCAGTTCACT+GGG | 0.555816 | 8.1:-38376883 | None:intergenic |
| AAATTGGTGAGATGATGACT+AGG | 0.561681 | 8.1:+38376836 | MS.gene61052:CDS |
| ATCCAATTCCAGTGAATAGT+GGG | 0.562056 | 8.1:+38376074 | MS.gene61052:CDS |
| TCCAGGGAGAGAAACTGATC+TGG | 0.563062 | 8.1:-38377049 | None:intergenic |
| AGTAGGGCAATCAAGTAACC+TGG | 0.566581 | 8.1:+38375997 | MS.gene61052:CDS |
| CTCAAGATTGTGAGATGTTG+CGG | 0.580351 | 8.1:+38376716 | MS.gene61052:CDS |
| TGAGTGAGTAATCTTCACTA+AGG | 0.580511 | 8.1:-38376320 | None:intergenic |
| ATTGTGAAGGCAATGCAGAT+GGG | 0.584457 | 8.1:+38376046 | MS.gene61052:CDS |
| TTGCTGCATATCTCGTCCAG+TGG | 0.584775 | 8.1:-38375948 | None:intergenic |
| TATCTCCACTGACTGACTTG+AGG | 0.586181 | 8.1:+38376944 | MS.gene61052:CDS |
| AATGAATCCACTCAAAGTAT+GGG | 0.589378 | 8.1:-38376630 | None:intergenic |
| AACTGGGTGTGTATTGGGCA+TGG | 0.590862 | 8.1:+38375730 | MS.gene61052:CDS |
| CATTCCCGTTTCCAAGTCCA+GGG | 0.591971 | 8.1:-38377065 | None:intergenic |
| CTGATATGACTGAAGATGCA+TGG | 0.592888 | 8.1:+38377373 | MS.gene61052:CDS |
| AGACTGTGATGTAGCTGGGT+CGG | 0.599868 | 8.1:+38376990 | MS.gene61052:CDS |
| GGAGTTTCGCAGTGGTGAGG+AGG | 0.603373 | 8.1:+38376858 | MS.gene61052:CDS |
| ATATAGACTGTGATGTAGCT+GGG | 0.606383 | 8.1:+38376986 | MS.gene61052:CDS |
| AGACATTAGGATTCTTAACA+CGG | 0.607966 | 8.1:+38376504 | MS.gene61052:CDS |
| CAGAAACAGATACAGAGGCT+TGG | 0.608792 | 8.1:+38377468 | MS.gene61052:CDS |
| GATGTAAGAAAGCTCATCCT+CGG | 0.608887 | 8.1:-38376677 | None:intergenic |
| GGAAAAGTGACAAAACCCTC+AGG | 0.610317 | 8.1:-38377156 | None:intergenic |
| AAGGTTACGCGTAAGAAGAA+GGG | 0.612709 | 8.1:-38375891 | None:intergenic |
| TTGTGAAGGCAATGCAGATG+GGG | 0.617717 | 8.1:+38376047 | MS.gene61052:CDS |
| TATTATGAAGCATATGGTCA+AGG | 0.618282 | 8.1:+38376021 | MS.gene61052:CDS |
| TTCGGCAAGGCACAGACCAT+AGG | 0.620750 | 8.1:-38376815 | None:intergenic |
| TCATCCCTCAAGTCAGTCAG+TGG | 0.622089 | 8.1:-38376949 | None:intergenic |
| GTAATCTTCACTAAGGCAGT+CGG | 0.624294 | 8.1:-38376313 | None:intergenic |
| TCAATATTTAATGTCAACGA+TGG | 0.626920 | 8.1:+38376340 | MS.gene61052:CDS |
| ATTCTTAACACGGACAGGCA+CGG | 0.628748 | 8.1:+38376514 | MS.gene61052:CDS |
| TTTGTTAGTTAGAAAAGTCG+GGG | 0.629850 | 8.1:+38376543 | MS.gene61052:CDS |
| CAAATTGTACGAGAGCATTG+AGG | 0.630368 | 8.1:+38377104 | MS.gene61052:CDS |
| TAGGGAGTTTCGCAGTGGTG+AGG | 0.635681 | 8.1:+38376855 | MS.gene61052:CDS |
| TCTCACTCTGAAGATGACAA+TGG | 0.643746 | 8.1:+38377014 | MS.gene61052:CDS |
| ATGCTCATACTGTGAAAAGG+AGG | 0.644568 | 8.1:+38375771 | MS.gene61052:CDS |
| AATTGGTGAGATGATGACTA+GGG | 0.645816 | 8.1:+38376837 | MS.gene61052:CDS |
| TACGATGCACAGCAGTAACA+GGG | 0.647251 | 8.1:-38376471 | None:intergenic |
| GGTCCTCCAAAGCTTCTGGA+AGG | 0.648444 | 8.1:-38376609 | None:intergenic |
| TATGGTCAAGGACATTGTGA+AGG | 0.651183 | 8.1:+38376033 | MS.gene61052:CDS |
| AGATTGTGAGATGTTGCGGA+AGG | 0.652349 | 8.1:+38376720 | MS.gene61052:CDS |
| ATCTTCACTAAGGCAGTCGG+AGG | 0.653479 | 8.1:-38376310 | None:intergenic |
| AAATACCAGAAGCATTCAGG+TGG | 0.655198 | 8.1:+38377255 | MS.gene61052:CDS |
| GGAACTGCCTATGATTCGGG+AGG | 0.655628 | 8.1:+38376741 | MS.gene61052:CDS |
| TCATCTCACCAATTTCGGCA+AGG | 0.656399 | 8.1:-38376828 | None:intergenic |
| TGGGAGGGAGACAATCTAGT+GGG | 0.658573 | 8.1:+38375681 | MS.gene61052:CDS |
| AAACATCCAGAGTAAGAAGG+TGG | 0.658683 | 8.1:+38376375 | MS.gene61052:CDS |
| GGAGGAACCCAGTGAACTGG+AGG | 0.660570 | 8.1:+38376876 | MS.gene61052:CDS |
| GGCTTCAATTCCATTCTCCG+AGG | 0.660851 | 8.1:+38376660 | MS.gene61052:CDS |
| AGTGGGTGACAAGCATGGAG+TGG | 0.664909 | 8.1:-38375930 | None:intergenic |
| TCACTTGCATCAAAATCATG+AGG | 0.674635 | 8.1:-38376430 | None:intergenic |
| TGTACCCGGCATTTGCCAAG+AGG | 0.676826 | 8.1:+38377427 | MS.gene61052:CDS |
| AATAGTGAAACCAACAGATG+AGG | 0.677779 | 8.1:+38376144 | MS.gene61052:CDS |
| GAGGGAGACAATCTAGTGGG+AGG | 0.681797 | 8.1:+38375684 | MS.gene61052:CDS |
| GAGAATGGAATTGAAGCCTG+AGG | 0.682346 | 8.1:-38376655 | None:intergenic |
| ATGGGAGGGAGACAATCTAG+TGG | 0.684867 | 8.1:+38375680 | MS.gene61052:CDS |
| TAGGTCAGAAACAGATACAG+AGG | 0.685042 | 8.1:+38377463 | MS.gene61052:CDS |
| GGTGATGGAGAATATCCTGA+GGG | 0.691024 | 8.1:+38377141 | MS.gene61052:CDS |
| ATTGTACGAGAGCATTGAGG+AGG | 0.691111 | 8.1:+38377107 | MS.gene61052:CDS |
| TCAATGTACTCTCTACCAAG+CGG | 0.695082 | 8.1:-38375647 | None:intergenic |
| AGGTGATGGAGAATATCCTG+AGG | 0.699576 | 8.1:+38377140 | MS.gene61052:CDS |
| ATGACTAGGGAGTTTCGCAG+TGG | 0.731477 | 8.1:+38376850 | MS.gene61052:CDS |
| TCATCTTCAAAACTGGCACG+AGG | 0.736726 | 8.1:-38377493 | None:intergenic |
| CTTAACACGGACAGGCACGG+TGG | 0.765035 | 8.1:+38376517 | MS.gene61052:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAATTCCTATTGATCAT+GGG | + | chr8.1:38376581-38376600 | MS.gene61052:CDS | 20.0% |
| !!! | AATTTGTTAGTTAGAAAAGT+CGG | + | chr8.1:38376541-38376560 | MS.gene61052:CDS | 20.0% |
| ! | GATTTAATTCCTATTGATCA+TGG | + | chr8.1:38376580-38376599 | MS.gene61052:CDS | 25.0% |
| ! | TCAATATTTAATGTCAACGA+TGG | + | chr8.1:38376340-38376359 | MS.gene61052:CDS | 25.0% |
| !! | ATTTGTTAGTTAGAAAAGTC+GGG | + | chr8.1:38376542-38376561 | MS.gene61052:CDS | 25.0% |
| !! | TACATTGAGAAAAAAAGCAT+GGG | + | chr8.1:38375662-38375681 | MS.gene61052:CDS | 25.0% |
| AAGAGGAAATCCATAACTAT+AGG | + | chr8.1:38377444-38377463 | MS.gene61052:CDS | 30.0% | |
| AATGAATCCACTCAAAGTAT+GGG | - | chr8.1:38376633-38376652 | None:intergenic | 30.0% | |
| AGACATTAGGATTCTTAACA+CGG | + | chr8.1:38376504-38376523 | MS.gene61052:CDS | 30.0% | |
| GTACATTGAGAAAAAAAGCA+TGG | + | chr8.1:38375661-38375680 | MS.gene61052:CDS | 30.0% | |
| GTATAGGGATATTAGACATT+AGG | + | chr8.1:38376491-38376510 | MS.gene61052:CDS | 30.0% | |
| TATAGTTATGGATTTCCTCT+TGG | - | chr8.1:38377445-38377464 | None:intergenic | 30.0% | |
| TATTACTTCCTGAACAAAAG+AGG | + | chr8.1:38376109-38376128 | MS.gene61052:CDS | 30.0% | |
| TATTATGAAGCATATGGTCA+AGG | + | chr8.1:38376021-38376040 | MS.gene61052:CDS | 30.0% | |
| TTTAGAAGCAAGGAATATGT+TGG | + | chr8.1:38376906-38376925 | MS.gene61052:CDS | 30.0% | |
| TTTGTTAGTTAGAAAAGTCG+GGG | + | chr8.1:38376543-38376562 | MS.gene61052:CDS | 30.0% | |
| ! | AAAACCTTTTGGATTGTTAG+GGG | - | chr8.1:38376179-38376198 | None:intergenic | 30.0% |
| ! | ACAAAACCTTTTGGATTGTT+AGG | - | chr8.1:38376181-38376200 | None:intergenic | 30.0% |
| ! | CAAAACCTTTTGGATTGTTA+GGG | - | chr8.1:38376180-38376199 | None:intergenic | 30.0% |
| ! | TTTTTGTGCAAACTGAAACT+GGG | + | chr8.1:38375714-38375733 | MS.gene61052:CDS | 30.0% |
| !! | AAAGCAGATAATGGATGTTA+TGG | + | chr8.1:38377279-38377298 | MS.gene61052:CDS | 30.0% |
| !! | AACAATCCAAAAGGTTTTGT+TGG | + | chr8.1:38376181-38376200 | MS.gene61052:CDS | 30.0% |
| !! | AAGCAGATAATGGATGTTAT+GGG | + | chr8.1:38377280-38377299 | MS.gene61052:CDS | 30.0% |
| !! | ATTTTGATGCAAGTGACTAT+GGG | + | chr8.1:38376437-38376456 | MS.gene61052:CDS | 30.0% |
| AAATTGGTGAGATGATGACT+AGG | + | chr8.1:38376836-38376855 | MS.gene61052:CDS | 35.0% | |
| AAGGAATATGTTGGCAGAAA+GGG | + | chr8.1:38376915-38376934 | MS.gene61052:CDS | 35.0% | |
| AATAGTGAAACCAACAGATG+AGG | + | chr8.1:38376144-38376163 | MS.gene61052:CDS | 35.0% | |
| AATTGGTGAGATGATGACTA+GGG | + | chr8.1:38376837-38376856 | MS.gene61052:CDS | 35.0% | |
| ACAATGCTCATACTGTGAAA+AGG | + | chr8.1:38375768-38375787 | MS.gene61052:CDS | 35.0% | |
| AGGTTGTTTGTTTAGAAGCA+AGG | + | chr8.1:38376896-38376915 | MS.gene61052:CDS | 35.0% | |
| AGTCATCATCTCACCAATTT+CGG | - | chr8.1:38376836-38376855 | None:intergenic | 35.0% | |
| ATATAGACTGTGATGTAGCT+GGG | + | chr8.1:38376986-38377005 | MS.gene61052:CDS | 35.0% | |
| ATCCAATTCCAGTGAATAGT+GGG | + | chr8.1:38376074-38376093 | MS.gene61052:CDS | 35.0% | |
| ATGCAGCAAAAAGATAAGAG+TGG | + | chr8.1:38375962-38375981 | MS.gene61052:CDS | 35.0% | |
| CAATGAATCCACTCAAAGTA+TGG | - | chr8.1:38376634-38376653 | None:intergenic | 35.0% | |
| CATCACAGTCTATATCAAAC+AGG | - | chr8.1:38376981-38377000 | None:intergenic | 35.0% | |
| CCATATGCTTCATAATATCC+AGG | - | chr8.1:38376018-38376037 | None:intergenic | 35.0% | |
| CCTGGATATTATGAAGCATA+TGG | + | chr8.1:38376015-38376034 | MS.gene61052:CDS | 35.0% | |
| GAAAAACATCCAGAGTAAGA+AGG | + | chr8.1:38376372-38376391 | MS.gene61052:CDS | 35.0% | |
| GCTTTCTTACATCGAAAATC+TGG | + | chr8.1:38376687-38376706 | MS.gene61052:CDS | 35.0% | |
| TATCATTCCGAACAGAACTA+AGG | - | chr8.1:38375868-38375887 | None:intergenic | 35.0% | |
| TCACTTGCATCAAAATCATG+AGG | - | chr8.1:38376433-38376452 | None:intergenic | 35.0% | |
| TCTCGTACAATTTGGAGAAT+GGG | - | chr8.1:38377098-38377117 | None:intergenic | 35.0% | |
| TGAGTGAGTAATCTTCACTA+AGG | - | chr8.1:38376323-38376342 | None:intergenic | 35.0% | |
| TGTTATGGGAATACATCATC+TGG | + | chr8.1:38377294-38377313 | MS.gene61052:CDS | 35.0% | |
| ! | AAGAGAGCTCTCTAACTTTT+GGG | + | chr8.1:38375822-38375841 | MS.gene61052:CDS | 35.0% |
| ! | ATTGAGAAAAAAAGCATGGG+AGG | + | chr8.1:38375665-38375684 | MS.gene61052:CDS | 35.0% |
| ! | CATACTTTGAGTGGATTCAT+TGG | + | chr8.1:38376632-38376651 | MS.gene61052:CDS | 35.0% |
| ! | GTTTTTGTGCAAACTGAAAC+TGG | + | chr8.1:38375713-38375732 | MS.gene61052:CDS | 35.0% |
| ! | TTGAGAAAAAAAGCATGGGA+GGG | + | chr8.1:38375666-38375685 | MS.gene61052:CDS | 35.0% |
| !! | ACAATGACCTTAGTTCTGTT+CGG | + | chr8.1:38375858-38375877 | MS.gene61052:CDS | 35.0% |
| !! | CTGTTTCTGACCTATAGTTA+TGG | - | chr8.1:38377457-38377476 | None:intergenic | 35.0% |
| !! | GATTTTGATGCAAGTGACTA+TGG | + | chr8.1:38376436-38376455 | MS.gene61052:CDS | 35.0% |
| AAACATCCAGAGTAAGAAGG+TGG | + | chr8.1:38376375-38376394 | MS.gene61052:CDS | 40.0% | |
| AACATCTCACAATCTTGAGC+AGG | - | chr8.1:38376715-38376734 | None:intergenic | 40.0% | |
| AACTGAAACTGGGTGTGTAT+TGG | + | chr8.1:38375724-38375743 | MS.gene61052:CDS | 40.0% | |
| AAGGTTACGCGTAAGAAGAA+GGG | - | chr8.1:38375894-38375913 | None:intergenic | 40.0% | |
| AATGTCAACGATGGAGTCAA+TGG | + | chr8.1:38376349-38376368 | MS.gene61052:CDS | 40.0% | |
| ACTGAAACTGGGTGTGTATT+GGG | + | chr8.1:38375725-38375744 | MS.gene61052:CDS | 40.0% | |
| AGAGAAACTGATCTGGTTAG+AGG | - | chr8.1:38377045-38377064 | None:intergenic | 40.0% | |
| AGATGCATGGACAATGTTTC+TGG | + | chr8.1:38377386-38377405 | MS.gene61052:CDS | 40.0% | |
| AGTGGTCCTATTGAGATAGT+AGG | + | chr8.1:38375980-38375999 | MS.gene61052:CDS | 40.0% | |
| ATGCTCATACTGTGAAAAGG+AGG | + | chr8.1:38375771-38375790 | MS.gene61052:CDS | 40.0% | |
| ATGTCAACGATGGAGTCAAT+GGG | + | chr8.1:38376350-38376369 | MS.gene61052:CDS | 40.0% | |
| ATTGTGAAGGCAATGCAGAT+GGG | + | chr8.1:38376046-38376065 | MS.gene61052:CDS | 40.0% | |
| CAAGGAATATGTTGGCAGAA+AGG | + | chr8.1:38376914-38376933 | MS.gene61052:CDS | 40.0% | |
| CTCAAGATTGTGAGATGTTG+CGG | + | chr8.1:38376716-38376735 | MS.gene61052:CDS | 40.0% | |
| CTCAATGCTCTCGTACAATT+TGG | - | chr8.1:38377106-38377125 | None:intergenic | 40.0% | |
| CTCTCGTACAATTTGGAGAA+TGG | - | chr8.1:38377099-38377118 | None:intergenic | 40.0% | |
| CTGAATGCTTCTGGTATTTC+TGG | - | chr8.1:38377254-38377273 | None:intergenic | 40.0% | |
| CTGATATGACTGAAGATGCA+TGG | + | chr8.1:38377373-38377392 | MS.gene61052:CDS | 40.0% | |
| GATATAGACTGTGATGTAGC+TGG | + | chr8.1:38376985-38377004 | MS.gene61052:CDS | 40.0% | |
| GATCCAATTCCAGTGAATAG+TGG | + | chr8.1:38376073-38376092 | MS.gene61052:CDS | 40.0% | |
| GATGTAAGAAAGCTCATCCT+CGG | - | chr8.1:38376680-38376699 | None:intergenic | 40.0% | |
| GATTGCCCTACTATCTCAAT+AGG | - | chr8.1:38375989-38376008 | None:intergenic | 40.0% | |
| GCTGCTTATCTACTTGACTA+TGG | + | chr8.1:38376271-38376290 | MS.gene61052:CDS | 40.0% | |
| GTAATCTTCACTAAGGCAGT+CGG | - | chr8.1:38376316-38376335 | None:intergenic | 40.0% | |
| GTGGTCCTATTGAGATAGTA+GGG | + | chr8.1:38375981-38376000 | MS.gene61052:CDS | 40.0% | |
| TAAGGTTACGCGTAAGAAGA+AGG | - | chr8.1:38375895-38375914 | None:intergenic | 40.0% | |
| TAGGTCAGAAACAGATACAG+AGG | + | chr8.1:38377463-38377482 | MS.gene61052:CDS | 40.0% | |
| TATGGTCAAGGACATTGTGA+AGG | + | chr8.1:38376033-38376052 | MS.gene61052:CDS | 40.0% | |
| TCAATGTACTCTCTACCAAG+CGG | - | chr8.1:38375650-38375669 | None:intergenic | 40.0% | |
| TCAGGTGGAAAAGCAGATAA+TGG | + | chr8.1:38377270-38377289 | MS.gene61052:CDS | 40.0% | |
| TGGATGAACTTCTGTGCATA+AGG | - | chr8.1:38375913-38375932 | None:intergenic | 40.0% | |
| TTACTGCTGTGCATCGTATA+GGG | + | chr8.1:38376476-38376495 | MS.gene61052:CDS | 40.0% | |
| TTAGAGAGCTCTCTTCAGTT+GGG | - | chr8.1:38375817-38375836 | None:intergenic | 40.0% | |
| TTAGGATTCTTAACACGGAC+AGG | + | chr8.1:38376509-38376528 | MS.gene61052:CDS | 40.0% | |
| TTTGCCCCTAACAATCCAAA+AGG | + | chr8.1:38376172-38376191 | MS.gene61052:CDS | 40.0% | |
| TTTGGATTGTTAGGGGCAAA+AGG | - | chr8.1:38376172-38376191 | None:intergenic | 40.0% | |
| ! | AAGCAACAGCCATTTGAGTT+TGG | - | chr8.1:38375616-38375635 | None:intergenic | 40.0% |
| ! | AAGTTCAAGCTTTGTGAAGC+TGG | + | chr8.1:38377350-38377369 | MS.gene61052:CDS | 40.0% |
| ! | AGAGAGCTCTCTAACTTTTG+GGG | + | chr8.1:38375823-38375842 | MS.gene61052:CDS | 40.0% |
| ! | AGGTTTGAAACGTTCAGTTC+GGG | + | chr8.1:38376222-38376241 | MS.gene61052:CDS | 40.0% |
| ! | CAGGTTTGAAACGTTCAGTT+CGG | + | chr8.1:38376221-38376240 | MS.gene61052:CDS | 40.0% |
| ! | GAAGAGAGCTCTCTAACTTT+TGG | + | chr8.1:38375821-38375840 | MS.gene61052:CDS | 40.0% |
| ! | GCTTTGCCAACAAAACCTTT+TGG | - | chr8.1:38376190-38376209 | None:intergenic | 40.0% |
| ! | TCTCACTCTGAAGATGACAA+TGG | + | chr8.1:38377014-38377033 | MS.gene61052:CDS | 40.0% |
| !! | AAATACCAGAAGCATTCAGG+TGG | + | chr8.1:38377255-38377274 | MS.gene61052:CDS | 40.0% |
| !! | CAAATTGTACGAGAGCATTG+AGG | + | chr8.1:38377104-38377123 | MS.gene61052:CDS | 40.0% |
| !! | CAGAAATACCAGAAGCATTC+AGG | + | chr8.1:38377252-38377271 | MS.gene61052:CDS | 40.0% |
| !!! | ACAGAAAGTTTTGAAACCGC+TGG | - | chr8.1:38377198-38377217 | None:intergenic | 40.0% |
| !!! | AGAAAGTTTTGAAACCGCTG+GGG | - | chr8.1:38377196-38377215 | None:intergenic | 40.0% |
| !!! | CAGAAAGTTTTGAAACCGCT+GGG | - | chr8.1:38377197-38377216 | None:intergenic | 40.0% |
| ACAAACAACCTCCAGTTCAC+TGG | - | chr8.1:38376887-38376906 | None:intergenic | 45.0% | |
| AGATTGTGAGATGTTGCGGA+AGG | + | chr8.1:38376720-38376739 | MS.gene61052:CDS | 45.0% | |
| AGCCCACTATTCACTGGAAT+TGG | - | chr8.1:38376079-38376098 | None:intergenic | 45.0% | |
| AGGCAAAGCCCATGATCAAT+AGG | - | chr8.1:38376592-38376611 | None:intergenic | 45.0% | |
| AGTAGGGCAATCAAGTAACC+TGG | + | chr8.1:38375997-38376016 | MS.gene61052:CDS | 45.0% | |
| ATACGATGCACAGCAGTAAC+AGG | - | chr8.1:38376475-38376494 | None:intergenic | 45.0% | |
| ATTCTTAACACGGACAGGCA+CGG | + | chr8.1:38376514-38376533 | MS.gene61052:CDS | 45.0% | |
| ATTGAGGAGGAGGAAGAAGA+AGG | + | chr8.1:38377120-38377139 | MS.gene61052:CDS | 45.0% | |
| ATTTCCTCTTGGCAAATGCC+GGG | - | chr8.1:38377434-38377453 | None:intergenic | 45.0% | |
| CAAACAACCTCCAGTTCACT+GGG | - | chr8.1:38376886-38376905 | None:intergenic | 45.0% | |
| CAGAAACAGATACAGAGGCT+TGG | + | chr8.1:38377468-38377487 | MS.gene61052:CDS | 45.0% | |
| CATTGTGAAGGCAATGCAGA+TGG | + | chr8.1:38376045-38376064 | MS.gene61052:CDS | 45.0% | |
| CGAACTGAACGTTTCAAACC+TGG | - | chr8.1:38376223-38376242 | None:intergenic | 45.0% | |
| GAAGGAACTGCCTATGATTC+GGG | + | chr8.1:38376738-38376757 | MS.gene61052:CDS | 45.0% | |
| GAGAATGGAATTGAAGCCTG+AGG | - | chr8.1:38376658-38376677 | None:intergenic | 45.0% | |
| GATTTCCTCTTGGCAAATGC+CGG | - | chr8.1:38377435-38377454 | None:intergenic | 45.0% | |
| GGAAAAGTGACAAAACCCTC+AGG | - | chr8.1:38377159-38377178 | None:intergenic | 45.0% | |
| GGAAGGAACTGCCTATGATT+CGG | + | chr8.1:38376737-38376756 | MS.gene61052:CDS | 45.0% | |
| GTGTGTATTGGGCATGGAAT+TGG | + | chr8.1:38375736-38375755 | MS.gene61052:CDS | 45.0% | |
| GTTACTGCTGTGCATCGTAT+AGG | + | chr8.1:38376475-38376494 | MS.gene61052:CDS | 45.0% | |
| GTTAGAGAGCTCTCTTCAGT+TGG | - | chr8.1:38375818-38375837 | None:intergenic | 45.0% | |
| TACGATGCACAGCAGTAACA+GGG | - | chr8.1:38376474-38376493 | None:intergenic | 45.0% | |
| TCATCTCACCAATTTCGGCA+AGG | - | chr8.1:38376831-38376850 | None:intergenic | 45.0% | |
| TCCTCATGAAAAAACCCCAG+CGG | + | chr8.1:38377179-38377198 | MS.gene61052:CDS | 45.0% | |
| TGCTAACCACCTTCTTACTC+TGG | - | chr8.1:38376384-38376403 | None:intergenic | 45.0% | |
| TTGAAACGTTCAGTTCGGGT+TGG | + | chr8.1:38376226-38376245 | MS.gene61052:CDS | 45.0% | |
| TTGTGAAGGCAATGCAGATG+GGG | + | chr8.1:38376047-38376066 | MS.gene61052:CDS | 45.0% | |
| ! | ACAGCCATTTGAGTTTGGAC+AGG | - | chr8.1:38375611-38375630 | None:intergenic | 45.0% |
| ! | ACTCTGCACCATTTTCCTGA+AGG | + | chr8.1:38376783-38376802 | MS.gene61052:CDS | 45.0% |
| ! | CAGCCATTTGAGTTTGGACA+GGG | - | chr8.1:38375610-38375629 | None:intergenic | 45.0% |
| ! | CTTTTCCACCTGAATGCTTC+TGG | - | chr8.1:38377263-38377282 | None:intergenic | 45.0% |
| ! | GTTAGAAAAGTCGGGGCTTT+TGG | + | chr8.1:38376550-38376569 | MS.gene61052:CDS | 45.0% |
| ! | TGAAACGTTCAGTTCGGGTT+GGG | + | chr8.1:38376227-38376246 | MS.gene61052:CDS | 45.0% |
| !! | AGGTGATGGAGAATATCCTG+AGG | + | chr8.1:38377140-38377159 | MS.gene61052:CDS | 45.0% |
| !! | ATCTCCACTGACTGACTTGA+GGG | + | chr8.1:38376945-38376964 | MS.gene61052:CDS | 45.0% |
| !! | ATTCCAGTGAATAGTGGGCT+TGG | + | chr8.1:38376079-38376098 | MS.gene61052:CDS | 45.0% |
| !! | ATTGTACGAGAGCATTGAGG+AGG | + | chr8.1:38377107-38377126 | MS.gene61052:CDS | 45.0% |
| !! | GCTTTATTTCGTAGTCCGCT+TGG | + | chr8.1:38375632-38375651 | MS.gene61052:CDS | 45.0% |
| !! | GGTGATGGAGAATATCCTGA+GGG | + | chr8.1:38377141-38377160 | MS.gene61052:CDS | 45.0% |
| !! | TATCTCCACTGACTGACTTG+AGG | + | chr8.1:38376944-38376963 | MS.gene61052:CDS | 45.0% |
| !!! | GGTTTTGTTGGCAAAGCTCT+TGG | + | chr8.1:38376193-38376212 | MS.gene61052:CDS | 45.0% |
| AACTGGGTGTGTATTGGGCA+TGG | + | chr8.1:38375730-38375749 | MS.gene61052:CDS | 50.0% | |
| AAGCAAGCCTCCCGAATCAT+AGG | - | chr8.1:38376751-38376770 | None:intergenic | 50.0% | |
| ACCAGATCAGTTTCTCTCCC+TGG | + | chr8.1:38377048-38377067 | MS.gene61052:CDS | 50.0% | |
| AGACTGTGATGTAGCTGGGT+CGG | + | chr8.1:38376990-38377009 | MS.gene61052:CDS | 50.0% | |
| AGCAGCCTCCTTCAGGAAAA+TGG | - | chr8.1:38376794-38376813 | None:intergenic | 50.0% | |
| ATCTTCACTAAGGCAGTCGG+AGG | - | chr8.1:38376313-38376332 | None:intergenic | 50.0% | |
| ATGACTAGGGAGTTTCGCAG+TGG | + | chr8.1:38376850-38376869 | MS.gene61052:CDS | 50.0% | |
| ATGGGAGGGAGACAATCTAG+TGG | + | chr8.1:38375680-38375699 | MS.gene61052:CDS | 50.0% | |
| CAGCCCTGTCCAAACTCAAA+TGG | + | chr8.1:38375604-38375623 | MS.gene61052:CDS | 50.0% | |
| CATTCCCGTTTCCAAGTCCA+GGG | - | chr8.1:38377068-38377087 | None:intergenic | 50.0% | |
| GAAAGCTCATCCTCGGAGAA+TGG | - | chr8.1:38376673-38376692 | None:intergenic | 50.0% | |
| GAGGAGGAAGAAGAAGGTGA+TGG | + | chr8.1:38377126-38377145 | MS.gene61052:CDS | 50.0% | |
| GCAAAAGGCTCCTCATCTGT+TGG | - | chr8.1:38376157-38376176 | None:intergenic | 50.0% | |
| GCAAGTGACTATGGGACATC+TGG | + | chr8.1:38376445-38376464 | MS.gene61052:CDS | 50.0% | |
| GCTTTGCCTTCCAGAAGCTT+TGG | + | chr8.1:38376603-38376622 | MS.gene61052:CDS | 50.0% | |
| GGCTTCAATTCCATTCTCCG+AGG | + | chr8.1:38376660-38376679 | MS.gene61052:CDS | 50.0% | |
| GTTTCAAGAGCTGCTGTACC+CGG | + | chr8.1:38377413-38377432 | MS.gene61052:CDS | 50.0% | |
| TATGGGTCCTCCAAAGCTTC+TGG | - | chr8.1:38376616-38376635 | None:intergenic | 50.0% | |
| TCAGTTTCTCTCCCTGGACT+TGG | + | chr8.1:38377054-38377073 | MS.gene61052:CDS | 50.0% | |
| TCATCCCTCAAGTCAGTCAG+TGG | - | chr8.1:38376952-38376971 | None:intergenic | 50.0% | |
| TCCAGGGAGAGAAACTGATC+TGG | - | chr8.1:38377052-38377071 | None:intergenic | 50.0% | |
| TCTCTCCCTGGACTTGGAAA+CGG | + | chr8.1:38377060-38377079 | MS.gene61052:CDS | 50.0% | |
| TGCAGAAAGCTGCTGCTCAT+TGG | - | chr8.1:38377331-38377350 | None:intergenic | 50.0% | |
| TGCTGCATATCTCGTCCAGT+GGG | - | chr8.1:38375950-38375969 | None:intergenic | 50.0% | |
| TGGAGGACCCATACTTTGAG+TGG | + | chr8.1:38376623-38376642 | MS.gene61052:CDS | 50.0% | |
| TGGGAGGGAGACAATCTAGT+GGG | + | chr8.1:38375681-38375700 | MS.gene61052:CDS | 50.0% | |
| TTGCTGCATATCTCGTCCAG+TGG | - | chr8.1:38375951-38375970 | None:intergenic | 50.0% | |
| ! | AAAAGTCGGGGCTTTTGGTG+AGG | + | chr8.1:38376555-38376574 | MS.gene61052:CDS | 50.0% |
| ! | CACTCTCGCCTCTTTTGTTC+AGG | - | chr8.1:38376120-38376139 | None:intergenic | 50.0% |
| ! | CTGCACCATTTTCCTGAAGG+AGG | + | chr8.1:38376786-38376805 | MS.gene61052:CDS | 50.0% |
| ! | TGAGTGGATTCATTGGCCTC+AGG | + | chr8.1:38376639-38376658 | MS.gene61052:CDS | 50.0% |
| ! | TTGCCTTCCAGAAGCTTTGG+AGG | + | chr8.1:38376606-38376625 | MS.gene61052:CDS | 50.0% |
| !! | GAAACGTTCAGTTCGGGTTG+GGG | + | chr8.1:38376228-38376247 | MS.gene61052:CDS | 50.0% |
| !!! | ACCGCTGGGGTTTTTTCATG+AGG | - | chr8.1:38377183-38377202 | None:intergenic | 50.0% |
| !!! | GCTGGGGTTTTTTCATGAGG+AGG | - | chr8.1:38377180-38377199 | None:intergenic | 50.0% |
| ACTCCATGCTTGTCACCCAC+TGG | + | chr8.1:38375932-38375951 | MS.gene61052:CDS | 55.0% | |
| AGTGGGTGACAAGCATGGAG+TGG | - | chr8.1:38375933-38375952 | None:intergenic | 55.0% | |
| CCATTCCCGTTTCCAAGTCC+AGG | - | chr8.1:38377069-38377088 | None:intergenic | 55.0% | |
| CCTCCAAGCCCACTATTCAC+TGG | - | chr8.1:38376085-38376104 | None:intergenic | 55.0% | |
| CCTGGACTTGGAAACGGGAA+TGG | + | chr8.1:38377066-38377085 | MS.gene61052:CDS | 55.0% | |
| CTCTCCCTGGACTTGGAAAC+GGG | + | chr8.1:38377061-38377080 | MS.gene61052:CDS | 55.0% | |
| GAGGGAGACAATCTAGTGGG+AGG | + | chr8.1:38375684-38375703 | MS.gene61052:CDS | 55.0% | |
| GGCAAAGCTCTTGGACAACC+AGG | + | chr8.1:38376202-38376221 | MS.gene61052:CDS | 55.0% | |
| GGTCCTCCAAAGCTTCTGGA+AGG | - | chr8.1:38376612-38376631 | None:intergenic | 55.0% | |
| GGTCTGTGCCTTGCCGAAAT+TGG | + | chr8.1:38376820-38376839 | MS.gene61052:CDS | 55.0% | |
| TAGGGAGTTTCGCAGTGGTG+AGG | + | chr8.1:38376855-38376874 | MS.gene61052:CDS | 55.0% | |
| TGAGGAGGAACCCAGTGAAC+TGG | + | chr8.1:38376873-38376892 | MS.gene61052:CDS | 55.0% | |
| TGTACCCGGCATTTGCCAAG+AGG | + | chr8.1:38377427-38377446 | MS.gene61052:CDS | 55.0% | |
| TTCGGCAAGGCACAGACCAT+AGG | - | chr8.1:38376818-38376837 | None:intergenic | 55.0% | |
| ! | GGAACTGCCTATGATTCGGG+AGG | + | chr8.1:38376741-38376760 | MS.gene61052:CDS | 55.0% |
| ! | GGTTGGGGAAACTGGCTTCA+GGG | + | chr8.1:38376243-38376262 | MS.gene61052:CDS | 55.0% |
| !! | CCAGTGAATAGTGGGCTTGG+AGG | + | chr8.1:38376082-38376101 | MS.gene61052:CDS | 55.0% |
| !! | GTACGAGAGCATTGAGGAGG+AGG | + | chr8.1:38377110-38377129 | MS.gene61052:CDS | 55.0% |
| !! | TCAGTTCGGGTTGGGGAAAC+TGG | + | chr8.1:38376235-38376254 | MS.gene61052:CDS | 55.0% |
| CATAGGCAGCAGCCTCCTTC+AGG | - | chr8.1:38376801-38376820 | None:intergenic | 60.0% | |
| CGTCCAGTGGGTGACAAGCA+TGG | - | chr8.1:38375938-38375957 | None:intergenic | 60.0% | |
| CTGAAGGAGGCTGCTGCCTA+TGG | + | chr8.1:38376799-38376818 | MS.gene61052:CDS | 60.0% | |
| CTTAACACGGACAGGCACGG+TGG | + | chr8.1:38376517-38376536 | MS.gene61052:CDS | 60.0% | |
| GGAGGAACCCAGTGAACTGG+AGG | + | chr8.1:38376876-38376895 | MS.gene61052:CDS | 60.0% | |
| GGAGTTTCGCAGTGGTGAGG+AGG | + | chr8.1:38376858-38376877 | MS.gene61052:CDS | 60.0% | |
| ! | AGTCGGGGCTTTTGGTGAGG+TGG | + | chr8.1:38376558-38376577 | MS.gene61052:CDS | 60.0% |
| ! | GGGTTGGGGAAACTGGCTTC+AGG | + | chr8.1:38376242-38376261 | MS.gene61052:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 38375587 | 38377509 | 38375587 | ID=MS.gene61052 |
| chr8.1 | mRNA | 38375587 | 38377509 | 38375587 | ID=MS.gene61052.t1;Parent=MS.gene61052 |
| chr8.1 | exon | 38375587 | 38377509 | 38375587 | ID=MS.gene61052.t1.exon1;Parent=MS.gene61052.t1 |
| chr8.1 | CDS | 38375587 | 38377509 | 38375587 | ID=cds.MS.gene61052.t1;Parent=MS.gene61052.t1 |
| Gene Sequence |
| Protein sequence |
