Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71236.t1 | XP_003628725.1 | 97.5 | 641 | 13 | 3 | 1 | 639 | 1 | 640 | 0.00E+00 | 1230.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71236.t1 | Q9SI52 | 68.2 | 666 | 169 | 12 | 1 | 639 | 1 | 650 | 2.2e-247 | 856.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71236.t1 | G7LG87 | 97.5 | 641 | 13 | 3 | 1 | 639 | 1 | 640 | 0.0e+00 | 1230.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene71236 | 0.817035 | 4.06E-52 | -1.69E-46 |
| MS.gene049368 | MS.gene71236 | 0.805728 | 1.16E-49 | -1.69E-46 |
| MS.gene049411 | MS.gene71236 | 0.813064 | 3.09E-51 | -1.69E-46 |
| MS.gene049499 | MS.gene71236 | 0.801468 | 8.88E-49 | -1.69E-46 |
| MS.gene049711 | MS.gene71236 | 0.808143 | 3.58E-50 | -1.69E-46 |
| MS.gene049807 | MS.gene71236 | 0.812816 | 3.51E-51 | -1.69E-46 |
| MS.gene049808 | MS.gene71236 | 0.839777 | 1.29E-57 | -1.69E-46 |
| MS.gene050306 | MS.gene71236 | 0.808144 | 3.58E-50 | -1.69E-46 |
| MS.gene050384 | MS.gene71236 | 0.861914 | 7.34E-64 | -1.69E-46 |
| MS.gene050386 | MS.gene71236 | 0.83948 | 1.55E-57 | -1.69E-46 |
| MS.gene050414 | MS.gene71236 | 0.812331 | 4.47E-51 | -1.69E-46 |
| MS.gene050646 | MS.gene71236 | 0.826214 | 3.07E-54 | -1.69E-46 |
| MS.gene050689 | MS.gene71236 | 0.837127 | 6.24E-57 | -1.69E-46 |
| MS.gene050945 | MS.gene71236 | 0.808826 | 2.56E-50 | -1.69E-46 |
| MS.gene051043 | MS.gene71236 | 0.806064 | 9.86E-50 | -1.69E-46 |
| MS.gene051279 | MS.gene71236 | 0.800457 | 1.43E-48 | -1.69E-46 |
| MS.gene051365 | MS.gene71236 | 0.80011 | 1.68E-48 | -1.69E-46 |
| MS.gene051731 | MS.gene71236 | 0.810341 | 1.21E-50 | -1.69E-46 |
| MS.gene052030 | MS.gene71236 | 0.800122 | 1.67E-48 | -1.69E-46 |
| MS.gene052036 | MS.gene71236 | 0.838795 | 2.33E-57 | -1.69E-46 |
| MS.gene052072 | MS.gene71236 | 0.836551 | 8.76E-57 | -1.69E-46 |
| MS.gene052239 | MS.gene71236 | -0.821419 | 4.08E-53 | -1.69E-46 |
| MS.gene052307 | MS.gene71236 | 0.832875 | 7.36E-56 | -1.69E-46 |
| MS.gene052516 | MS.gene71236 | 0.816495 | 5.37E-52 | -1.69E-46 |
| MS.gene052628 | MS.gene71236 | 0.801619 | 8.27E-49 | -1.69E-46 |
| MS.gene053272 | MS.gene71236 | -0.849001 | 4.28E-60 | -1.69E-46 |
| MS.gene053427 | MS.gene71236 | 0.820762 | 5.78E-53 | -1.69E-46 |
| MS.gene053541 | MS.gene71236 | 0.828781 | 7.43E-55 | -1.69E-46 |
| MS.gene053542 | MS.gene71236 | 0.838017 | 3.69E-57 | -1.69E-46 |
| MS.gene053575 | MS.gene71236 | 0.804516 | 2.08E-49 | -1.69E-46 |
| MS.gene05364 | MS.gene71236 | 0.82562 | 4.25E-54 | -1.69E-46 |
| MS.gene053931 | MS.gene71236 | 0.827946 | 1.18E-54 | -1.69E-46 |
| MS.gene054004 | MS.gene71236 | 0.802865 | 4.58E-49 | -1.69E-46 |
| MS.gene05458 | MS.gene71236 | 0.802748 | 4.84E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene71236 | 0.832099 | 1.15E-55 | -1.69E-46 |
| MS.gene054709 | MS.gene71236 | 0.835079 | 2.07E-56 | -1.69E-46 |
| MS.gene055339 | MS.gene71236 | 0.829645 | 4.59E-55 | -1.69E-46 |
| MS.gene055694 | MS.gene71236 | 0.810433 | 1.16E-50 | -1.69E-46 |
| MS.gene056082 | MS.gene71236 | 0.813094 | 3.05E-51 | -1.69E-46 |
| MS.gene056363 | MS.gene71236 | 0.824969 | 6.05E-54 | -1.69E-46 |
| MS.gene056578 | MS.gene71236 | 0.802477 | 5.51E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene71236 | 0.844734 | 6.29E-59 | -1.69E-46 |
| MS.gene056881 | MS.gene71236 | 0.810959 | 8.89E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene71236 | 0.812579 | 3.95E-51 | -1.69E-46 |
| MS.gene057132 | MS.gene71236 | 0.823884 | 1.09E-53 | -1.69E-46 |
| MS.gene057208 | MS.gene71236 | 0.81717 | 3.79E-52 | -1.69E-46 |
| MS.gene057598 | MS.gene71236 | 0.820992 | 5.12E-53 | -1.69E-46 |
| MS.gene057694 | MS.gene71236 | 0.81185 | 5.70E-51 | -1.69E-46 |
| MS.gene058008 | MS.gene71236 | 0.842277 | 2.85E-58 | -1.69E-46 |
| MS.gene058009 | MS.gene71236 | 0.843345 | 1.48E-58 | -1.69E-46 |
| MS.gene058010 | MS.gene71236 | 0.800902 | 1.16E-48 | -1.69E-46 |
| MS.gene058149 | MS.gene71236 | 0.814342 | 1.62E-51 | -1.69E-46 |
| MS.gene058634 | MS.gene71236 | 0.859217 | 4.82E-63 | -1.69E-46 |
| MS.gene058781 | MS.gene71236 | 0.862307 | 5.56E-64 | -1.69E-46 |
| MS.gene058783 | MS.gene71236 | 0.838091 | 3.53E-57 | -1.69E-46 |
| MS.gene05894 | MS.gene71236 | 0.816092 | 6.61E-52 | -1.69E-46 |
| MS.gene058979 | MS.gene71236 | 0.807555 | 4.77E-50 | -1.69E-46 |
| MS.gene059634 | MS.gene71236 | 0.800468 | 1.42E-48 | -1.69E-46 |
| MS.gene059778 | MS.gene71236 | 0.80496 | 1.68E-49 | -1.69E-46 |
| MS.gene05978 | MS.gene71236 | 0.806938 | 6.45E-50 | -1.69E-46 |
| MS.gene05985 | MS.gene71236 | -0.808884 | 2.49E-50 | -1.69E-46 |
| MS.gene060244 | MS.gene71236 | 0.828696 | 7.79E-55 | -1.69E-46 |
| MS.gene060933 | MS.gene71236 | 0.806943 | 6.44E-50 | -1.69E-46 |
| MS.gene060935 | MS.gene71236 | 0.872311 | 3.51E-67 | -1.69E-46 |
| MS.gene060937 | MS.gene71236 | 0.863455 | 2.46E-64 | -1.69E-46 |
| MS.gene061100 | MS.gene71236 | 0.831787 | 1.37E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene71236 | MS.gene61052 | PPI |
| MS.gene71236 | MS.gene038501 | PPI |
| MS.gene029676 | MS.gene71236 | PPI |
| MS.gene58968 | MS.gene71236 | PPI |
| MS.gene71236 | MS.gene009056 | PPI |
| MS.gene71236 | MS.gene62152 | PPI |
| MS.gene66860 | MS.gene71236 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71236.t1 | MTR_8g066090 | 97.504 | 641 | 13 | 3 | 1 | 639 | 1 | 640 | 0.0 | 1284 |
| MS.gene71236.t1 | MTR_0009s0120 | 77.245 | 646 | 134 | 6 | 1 | 639 | 1 | 640 | 0.0 | 981 |
| MS.gene71236.t1 | MTR_7g017360 | 63.003 | 646 | 218 | 9 | 1 | 639 | 1 | 632 | 0.0 | 766 |
| MS.gene71236.t1 | MTR_5g009120 | 39.144 | 327 | 178 | 6 | 134 | 447 | 238 | 556 | 5.32e-63 | 219 |
| MS.gene71236.t1 | MTR_3g091400 | 41.077 | 297 | 149 | 7 | 146 | 425 | 247 | 534 | 3.25e-62 | 217 |
| MS.gene71236.t1 | MTR_8g027610 | 40.068 | 292 | 145 | 6 | 150 | 425 | 270 | 547 | 7.62e-62 | 216 |
| MS.gene71236.t1 | MTR_8g099565 | 39.697 | 330 | 170 | 9 | 134 | 447 | 251 | 567 | 1.02e-61 | 216 |
| MS.gene71236.t1 | MTR_7g117395 | 38.514 | 296 | 152 | 6 | 146 | 425 | 266 | 547 | 6.57e-58 | 205 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71236.t1 | AT2G03890 | 69.219 | 666 | 162 | 12 | 1 | 639 | 1 | 650 | 0.0 | 894 |
| MS.gene71236.t1 | AT1G26270 | 68.837 | 645 | 180 | 10 | 1 | 639 | 1 | 630 | 0.0 | 868 |
| MS.gene71236.t1 | AT1G13640 | 64.561 | 649 | 181 | 12 | 13 | 639 | 1 | 622 | 0.0 | 805 |
| MS.gene71236.t1 | AT1G13640 | 64.561 | 649 | 181 | 12 | 13 | 639 | 1 | 622 | 0.0 | 805 |
| MS.gene71236.t1 | AT2G03890 | 61.667 | 480 | 143 | 10 | 180 | 639 | 72 | 530 | 0.0 | 548 |
| MS.gene71236.t1 | AT2G03890 | 71.845 | 103 | 20 | 3 | 1 | 96 | 1 | 101 | 3.73e-35 | 140 |
| MS.gene71236.t1 | AT2G40850 | 41.530 | 549 | 248 | 16 | 110 | 639 | 67 | 561 | 1.28e-120 | 370 |
| MS.gene71236.t1 | AT3G56600 | 51.724 | 348 | 149 | 4 | 106 | 444 | 48 | 385 | 3.21e-118 | 363 |
| MS.gene71236.t1 | AT3G56600 | 51.724 | 348 | 149 | 4 | 106 | 444 | 51 | 388 | 4.35e-118 | 362 |
| MS.gene71236.t1 | AT3G56600 | 51.724 | 348 | 149 | 4 | 106 | 444 | 51 | 388 | 4.35e-118 | 362 |
| MS.gene71236.t1 | AT5G24240 | 40.240 | 333 | 169 | 8 | 146 | 465 | 242 | 557 | 2.03e-65 | 225 |
| MS.gene71236.t1 | AT5G24240 | 40.240 | 333 | 169 | 8 | 146 | 465 | 242 | 557 | 2.03e-65 | 225 |
| MS.gene71236.t1 | AT2G46500 | 34.279 | 423 | 219 | 11 | 45 | 425 | 115 | 520 | 8.58e-63 | 218 |
| MS.gene71236.t1 | AT2G46500 | 34.279 | 423 | 219 | 11 | 45 | 425 | 115 | 520 | 8.58e-63 | 218 |
| MS.gene71236.t1 | AT2G46500 | 29.766 | 299 | 152 | 10 | 45 | 301 | 115 | 397 | 2.24e-23 | 103 |
| MS.gene71236.t1 | AT1G27570 | 29.237 | 236 | 131 | 10 | 227 | 443 | 399 | 617 | 2.95e-11 | 67.0 |
| MS.gene71236.t1 | AT1G27570 | 29.237 | 236 | 131 | 10 | 227 | 443 | 390 | 608 | 3.95e-11 | 66.6 |
Find 180 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAATGCTTCTGGTATTTC+TGG | 0.020252 | 8.3:-36787336 | None:intergenic |
| CTCAATGCTCTCGTACAATT+TGG | 0.244008 | 8.3:-36787191 | None:intergenic |
| GAAGAGAGCTCTCTAACTTT+TGG | 0.267353 | 8.3:+36785909 | MS.gene71236:CDS |
| CAATGAATCCACTCAAAGTA+TGG | 0.272331 | 8.3:-36786719 | None:intergenic |
| AGATGCATGGACAATGTTTC+TGG | 0.285007 | 8.3:+36787471 | MS.gene71236:CDS |
| GTTAGAAAAGTCGGGGCTTT+TGG | 0.306638 | 8.3:+36786638 | MS.gene71236:CDS |
| AAAGCAGATAATGGATGTTA+TGG | 0.313231 | 8.3:+36787364 | MS.gene71236:CDS |
| AGCAGCCTCCTTCAGGAAAA+TGG | 0.316245 | 8.3:-36786879 | None:intergenic |
| CAGAAATACCAGAAGCATTC+AGG | 0.317205 | 8.3:+36787337 | MS.gene71236:CDS |
| GTTACTACTGTGCATCGTAT+AGG | 0.320321 | 8.3:+36786563 | MS.gene71236:CDS |
| GGGTTGGGGAAACTGGCTTC+AGG | 0.327671 | 8.3:+36786330 | MS.gene71236:CDS |
| TCAGTTCGGGTTGGGGAAAC+TGG | 0.331943 | 8.3:+36786323 | MS.gene71236:CDS |
| AGTCATCATCTCACCAATTT+CGG | 0.333656 | 8.3:-36786921 | None:intergenic |
| TATGGGTCCTCCAAAGCTTC+TGG | 0.334039 | 8.3:-36786701 | None:intergenic |
| AAGCAACAGCCATTTGAGTT+TGG | 0.335402 | 8.3:-36785701 | None:intergenic |
| AGCCCACTATTCACTGGAAT+TGG | 0.339986 | 8.3:-36786164 | None:intergenic |
| GCTTTCTTACATCGAAAATC+TGG | 0.339987 | 8.3:+36786775 | MS.gene71236:CDS |
| GCTGCTTATCTACTTGACTA+TGG | 0.343089 | 8.3:+36786359 | MS.gene71236:CDS |
| CTGTTTCTGACCTATAGTTA+TGG | 0.343217 | 8.3:-36787539 | None:intergenic |
| TTACTACTGTGCATCGTATA+GGG | 0.346419 | 8.3:+36786564 | MS.gene71236:CDS |
| GCTTTGCCTTCCAGAAGCTT+TGG | 0.355876 | 8.3:+36786691 | MS.gene71236:CDS |
| CTCTCCCTGGACTTGGAAAC+GGG | 0.356675 | 8.3:+36787149 | MS.gene71236:CDS |
| GGTCTGTGCCTTGCCGAAAT+TGG | 0.357724 | 8.3:+36786908 | MS.gene71236:CDS |
| CATAGGCAGCAGCCTCCTTC+AGG | 0.360950 | 8.3:-36786886 | None:intergenic |
| GTATAGGGATATTAGACATT+AGG | 0.362621 | 8.3:+36786579 | MS.gene71236:CDS |
| ATACGATGCACAGTAGTAAC+AGG | 0.363690 | 8.3:-36786560 | None:intergenic |
| TGAAACGTTCAGTTCGGGTT+GGG | 0.364791 | 8.3:+36786315 | MS.gene71236:CDS |
| GCTTTGCCAACAAAACCTTT+TGG | 0.380074 | 8.3:-36786275 | None:intergenic |
| GATTTAATTCCTATTGATCA+TGG | 0.388146 | 8.3:+36786668 | MS.gene71236:CDS |
| CAGGTTTGAAACGTTCAGTT+CGG | 0.388270 | 8.3:+36786309 | MS.gene71236:CDS |
| GTGTGTATTGGGCATGGAAT+TGG | 0.388380 | 8.3:+36785824 | MS.gene71236:CDS |
| CATACTTTGAGTGGATTCAT+TGG | 0.391075 | 8.3:+36786720 | MS.gene71236:CDS |
| ACTGAAACTGGGTGTGTATT+GGG | 0.393077 | 8.3:+36785813 | MS.gene71236:CDS |
| TTGCCTTCCAGAAGCTTTGG+AGG | 0.400314 | 8.3:+36786694 | MS.gene71236:CDS |
| CTCTCGTACAATTTGGAGAA+TGG | 0.400704 | 8.3:-36787184 | None:intergenic |
| TCAGTTTCTCTCCCTGGACT+TGG | 0.403434 | 8.3:+36787142 | MS.gene71236:CDS |
| TCTGTTGATGTCTCGTAAAT+CGG | 0.405325 | 8.3:+36785668 | None:intergenic |
| GAAGGAACTGCCTATGATTC+GGG | 0.405810 | 8.3:+36786826 | MS.gene71236:CDS |
| TCTCTCCCTGGACTTGGAAA+CGG | 0.412632 | 8.3:+36787148 | MS.gene71236:CDS |
| AAGTTCAAGCTTTGTGAAGC+TGG | 0.413490 | 8.3:+36787435 | MS.gene71236:CDS |
| AGTGGTCCTATTGAGATAGT+AGG | 0.413897 | 8.3:+36786068 | MS.gene71236:CDS |
| TCAGGTGGAAAAGCAGATAA+TGG | 0.414362 | 8.3:+36787355 | MS.gene71236:CDS |
| AAGAGGAAATCCATAACTAT+AGG | 0.417543 | 8.3:+36787529 | MS.gene71236:CDS |
| ACAAACAACCTCCAGTTCAC+TGG | 0.419347 | 8.3:-36786972 | None:intergenic |
| GTATTGCTCATCTTCAAAAC+TGG | 0.422923 | 8.3:-36787585 | None:intergenic |
| AAGCAAGCCTCCCGAATCAT+AGG | 0.426402 | 8.3:-36786836 | None:intergenic |
| CGAACTGAACGTTTCAAACC+TGG | 0.427079 | 8.3:-36786308 | None:intergenic |
| AGGCAAAGCCCATGATCAAT+AGG | 0.427118 | 8.3:-36786677 | None:intergenic |
| AGAGAAACTGATCTGGTTAG+AGG | 0.430381 | 8.3:-36787130 | None:intergenic |
| TGAGTGGATTCATTGGCCTC+AGG | 0.430525 | 8.3:+36786727 | MS.gene71236:CDS |
| ATTTGTTAGTTAGAAAAGTC+GGG | 0.431689 | 8.3:+36786630 | MS.gene71236:CDS |
| GGAAGGAACTGCCTATGATT+CGG | 0.436125 | 8.3:+36786825 | MS.gene71236:CDS |
| CTGAAGGAGGCTGCTGCCTA+TGG | 0.439179 | 8.3:+36786887 | MS.gene71236:CDS |
| GATTTCCTCTTGGCAAATGC+CGG | 0.440028 | 8.3:-36787517 | None:intergenic |
| TGCAGAAAGCTGCTGCTCAT+TGG | 0.440402 | 8.3:-36787413 | None:intergenic |
| GATTGCCCTACTATCTCAAT+AGG | 0.443982 | 8.3:-36786074 | None:intergenic |
| CCATTCCCGTTTCCAAGTCC+AGG | 0.445014 | 8.3:-36787154 | None:intergenic |
| AACTGAAACTGGGTGTGTAT+TGG | 0.447347 | 8.3:+36785812 | MS.gene71236:CDS |
| GCAAGTGACTATGGGACATC+TGG | 0.450686 | 8.3:+36786533 | MS.gene71236:CDS |
| TATAGTTATGGATTTCCTCT+TGG | 0.450899 | 8.3:-36787527 | None:intergenic |
| TTTGGATTGTTAGGGGCAAA+AGG | 0.455081 | 8.3:-36786257 | None:intergenic |
| AATGTCAACGATGGAGTCAA+TGG | 0.457911 | 8.3:+36786437 | MS.gene71236:CDS |
| ATTCCAGTGAATAGTGGGCT+TGG | 0.464563 | 8.3:+36786167 | MS.gene71236:CDS |
| GATATAGACTGTGATGTAGC+TGG | 0.466536 | 8.3:+36787073 | MS.gene71236:CDS |
| GGTTGGGGAAACTGGCTTCA+GGG | 0.467085 | 8.3:+36786331 | MS.gene71236:CDS |
| TGAGGAGGAACCCAGTGAAC+TGG | 0.469642 | 8.3:+36786961 | MS.gene71236:CDS |
| AAGCAGATAATGGATGTTAT+GGG | 0.472965 | 8.3:+36787365 | MS.gene71236:CDS |
| ACAATGACCTTAGTTCTGTT+CGG | 0.474164 | 8.3:+36785946 | MS.gene71236:CDS |
| TCTCGTACAATTTGGAGAAT+GGG | 0.475346 | 8.3:-36787183 | None:intergenic |
| CCTGGATATTATGAAGCATA+TGG | 0.475595 | 8.3:+36786103 | MS.gene71236:CDS |
| CATCACAGTCTATATCAAAC+AGG | 0.475913 | 8.3:-36787066 | None:intergenic |
| CAGCCCTGTCCAAACTCAAA+TGG | 0.476458 | 8.3:+36785692 | MS.gene71236:CDS |
| GAAAGCTCATCCTCGGAGAA+TGG | 0.476660 | 8.3:-36786758 | None:intergenic |
| GTACGAGAGCATTGAGGAGG+AGG | 0.476694 | 8.3:+36787198 | MS.gene71236:CDS |
| ATCTCCACAGACTGACTTGA+GGG | 0.478773 | 8.3:+36787033 | MS.gene71236:CDS |
| TGTTATGGGAATACATCATC+TGG | 0.479228 | 8.3:+36787379 | MS.gene71236:CDS |
| TGGATGAACTTCTGTGCATA+AGG | 0.481738 | 8.3:-36785998 | None:intergenic |
| GCTTTATTTCGTAGTCCGCT+TGG | 0.483950 | 8.3:+36785720 | MS.gene71236:CDS |
| ACAGCCATTTGAGTTTGGAC+AGG | 0.485062 | 8.3:-36785696 | None:intergenic |
| TGCTAACCACCTTCTTACTC+TGG | 0.486077 | 8.3:-36786469 | None:intergenic |
| GAAACGTTCAGTTCGGGTTG+GGG | 0.486697 | 8.3:+36786316 | MS.gene71236:CDS |
| ATTGAGGAGGAGGAAGAAGA+AGG | 0.486989 | 8.3:+36787208 | MS.gene71236:CDS |
| TAAGGTTACGCGTAAGAAGA+AGG | 0.487508 | 8.3:-36785980 | None:intergenic |
| GATCCAATTCCAGTGAATAG+TGG | 0.488188 | 8.3:+36786161 | MS.gene71236:CDS |
| AAGGAATATGTTGGCAGAAA+GGG | 0.488308 | 8.3:+36787003 | MS.gene71236:CDS |
| GTTAGAGAGCTCTCTTCAGT+TGG | 0.488845 | 8.3:-36785903 | None:intergenic |
| GGCAAAGCTCTTGGACAACC+AGG | 0.494242 | 8.3:+36786290 | MS.gene71236:CDS |
| ACCAGATCAGTTTCTCTCCC+TGG | 0.495779 | 8.3:+36787136 | MS.gene71236:CDS |
| AATTTGTTAGTTAGAAAAGT+CGG | 0.498110 | 8.3:+36786629 | MS.gene71236:CDS |
| CCTGGACTTGGAAACGGGAA+TGG | 0.499054 | 8.3:+36787154 | MS.gene71236:CDS |
| AGGTTTGAAACGTTCAGTTC+GGG | 0.499842 | 8.3:+36786310 | MS.gene71236:CDS |
| ACTCCATGCTTGTCACCCAC+TGG | 0.501468 | 8.3:+36786020 | MS.gene71236:CDS |
| CATTGTGAAGGCAATGCAGA+TGG | 0.505557 | 8.3:+36786133 | MS.gene71236:CDS |
| GAGGAGGAAGAAGAAGGTGA+TGG | 0.508640 | 8.3:+36787214 | MS.gene71236:CDS |
| CAAGGAATATGTTGGCAGAA+AGG | 0.511208 | 8.3:+36787002 | MS.gene71236:CDS |
| AGTAGGGCAATCAAGTAGCC+TGG | 0.511327 | 8.3:+36786085 | MS.gene71236:CDS |
| ATTTCCTCTTGGCAAATGCC+GGG | 0.512706 | 8.3:-36787516 | None:intergenic |
| TTTGCCCCTAACAATCCAAA+AGG | 0.515576 | 8.3:+36786260 | MS.gene71236:CDS |
| ATTTAATTCCTATTGATCAT+GGG | 0.515719 | 8.3:+36786669 | MS.gene71236:CDS |
| CCATATGCTTCATAATATCC+AGG | 0.516408 | 8.3:-36786103 | None:intergenic |
| GTTTCAAGAGCTGCTGTACC+CGG | 0.517286 | 8.3:+36787498 | MS.gene71236:CDS |
| CCTCCAAGCCCACTATTCAC+TGG | 0.518053 | 8.3:-36786170 | None:intergenic |
| TTTAGAAGCAAGGAATATGT+TGG | 0.522762 | 8.3:+36786994 | MS.gene71236:CDS |
| CCAGTGAATAGTGGGCTTGG+AGG | 0.525249 | 8.3:+36786170 | MS.gene71236:CDS |
| TTAGAGAGCTCTCTTCAGTT+GGG | 0.526432 | 8.3:-36785902 | None:intergenic |
| AGGTTGTTTGTTTAGAAGCA+AGG | 0.528616 | 8.3:+36786984 | MS.gene71236:CDS |
| CAGCCATTTGAGTTTGGACA+GGG | 0.529127 | 8.3:-36785695 | None:intergenic |
| ATGTCAACGATGGAGTCAAT+GGG | 0.533411 | 8.3:+36786438 | MS.gene71236:CDS |
| TGCTGCATATCTCGTCCAGT+GGG | 0.534004 | 8.3:-36786035 | None:intergenic |
| AACATCTCACAATCTTGAGC+AGG | 0.536201 | 8.3:-36786800 | None:intergenic |
| GTGGTCCTATTGAGATAGTA+GGG | 0.538139 | 8.3:+36786069 | MS.gene71236:CDS |
| TATCATTCCGAACAGAACTA+AGG | 0.539457 | 8.3:-36785953 | None:intergenic |
| TGGAGGACCCATACTTTGAG+TGG | 0.540905 | 8.3:+36786711 | MS.gene71236:CDS |
| TTGAAACGTTCAGTTCGGGT+TGG | 0.541580 | 8.3:+36786314 | MS.gene71236:CDS |
| TTAGGATTCTTAACACGGAC+AGG | 0.542430 | 8.3:+36786597 | MS.gene71236:CDS |
| GCAAAAGGCTCCTCATCTGT+TGG | 0.543208 | 8.3:-36786242 | None:intergenic |
| TATTACTTCCTGAACAAAAG+AGG | 0.545249 | 8.3:+36786197 | MS.gene71236:CDS |
| CGTCCAGTGGGTGACAAGCA+TGG | 0.548654 | 8.3:-36786023 | None:intergenic |
| CAAACAACCTCCAGTTCACT+GGG | 0.555816 | 8.3:-36786971 | None:intergenic |
| AAATTGGTGAGATGATGACT+AGG | 0.561681 | 8.3:+36786924 | MS.gene71236:CDS |
| ATCCAATTCCAGTGAATAGT+GGG | 0.562056 | 8.3:+36786162 | MS.gene71236:CDS |
| TCCAGGGAGAGAAACTGATC+TGG | 0.563062 | 8.3:-36787137 | None:intergenic |
| CTCAAGATTGTGAGATGTTG+CGG | 0.580351 | 8.3:+36786804 | MS.gene71236:CDS |
| TGAGTGAGTAATCTTCACTA+AGG | 0.580511 | 8.3:-36786408 | None:intergenic |
| ATTGTGAAGGCAATGCAGAT+GGG | 0.584457 | 8.3:+36786134 | MS.gene71236:CDS |
| TTGCTGCATATCTCGTCCAG+TGG | 0.584775 | 8.3:-36786036 | None:intergenic |
| AATGAATCCACTCAAAGTAT+GGG | 0.589378 | 8.3:-36786718 | None:intergenic |
| AACTGGGTGTGTATTGGGCA+TGG | 0.590862 | 8.3:+36785818 | MS.gene71236:CDS |
| CATTCCCGTTTCCAAGTCCA+GGG | 0.591971 | 8.3:-36787153 | None:intergenic |
| CTGATATGACTGAAGATGCA+TGG | 0.592888 | 8.3:+36787458 | MS.gene71236:CDS |
| AGACTGTGATGTAGCTGGGT+CGG | 0.599868 | 8.3:+36787078 | MS.gene71236:CDS |
| GGAGTTTCGCAGTGGTGAGG+AGG | 0.603373 | 8.3:+36786946 | MS.gene71236:CDS |
| GGAAAAGTGACAAAACCCTC+AGG | 0.604297 | 8.3:-36787244 | None:intergenic |
| ATATAGACTGTGATGTAGCT+GGG | 0.606383 | 8.3:+36787074 | MS.gene71236:CDS |
| AGACATTAGGATTCTTAACA+CGG | 0.607966 | 8.3:+36786592 | MS.gene71236:CDS |
| CAGAAACAGATACAGAGGCT+TGG | 0.608792 | 8.3:+36787553 | MS.gene71236:CDS |
| GATGTAAGAAAGCTCATCCT+CGG | 0.608887 | 8.3:-36786765 | None:intergenic |
| AAGGTTACGCGTAAGAAGAA+GGG | 0.612709 | 8.3:-36785979 | None:intergenic |
| TTGTGAAGGCAATGCAGATG+GGG | 0.617717 | 8.3:+36786135 | MS.gene71236:CDS |
| TATTATGAAGCATATGGTCA+AGG | 0.618282 | 8.3:+36786109 | MS.gene71236:CDS |
| TCATCCCTCAAGTCAGTCTG+TGG | 0.619607 | 8.3:-36787037 | None:intergenic |
| TTCGGCAAGGCACAGACCAT+AGG | 0.620750 | 8.3:-36786903 | None:intergenic |
| TATCTCCACAGACTGACTTG+AGG | 0.623694 | 8.3:+36787032 | MS.gene71236:CDS |
| GTAATCTTCACTAAGGCAGT+CGG | 0.624294 | 8.3:-36786401 | None:intergenic |
| TCAATATTTAATGTCAACGA+TGG | 0.626920 | 8.3:+36786428 | MS.gene71236:CDS |
| ATTCTTAACACGGACAGGCA+CGG | 0.628748 | 8.3:+36786602 | MS.gene71236:CDS |
| TTTGTTAGTTAGAAAAGTCG+GGG | 0.629850 | 8.3:+36786631 | MS.gene71236:CDS |
| CAAATTGTACGAGAGCATTG+AGG | 0.630368 | 8.3:+36787192 | MS.gene71236:CDS |
| TAGGGAGTTTCGCAGTGGTG+AGG | 0.635681 | 8.3:+36786943 | MS.gene71236:CDS |
| TCTCACTCTGAAGATGACAA+TGG | 0.643746 | 8.3:+36787102 | MS.gene71236:CDS |
| AATTGGTGAGATGATGACTA+GGG | 0.645816 | 8.3:+36786925 | MS.gene71236:CDS |
| ATGCTCATACTGTGAAGAGG+AGG | 0.648058 | 8.3:+36785859 | MS.gene71236:CDS |
| GGTCCTCCAAAGCTTCTGGA+AGG | 0.648444 | 8.3:-36786697 | None:intergenic |
| ACAATGCTCATACTGTGAAG+AGG | 0.649410 | 8.3:+36785856 | MS.gene71236:CDS |
| TATGGTCAAGGACATTGTGA+AGG | 0.651183 | 8.3:+36786121 | MS.gene71236:CDS |
| AGATTGTGAGATGTTGCGGA+AGG | 0.652349 | 8.3:+36786808 | MS.gene71236:CDS |
| ATCTTCACTAAGGCAGTCGG+AGG | 0.653479 | 8.3:-36786398 | None:intergenic |
| AAATACCAGAAGCATTCAGG+TGG | 0.655198 | 8.3:+36787340 | MS.gene71236:CDS |
| GGAACTGCCTATGATTCGGG+AGG | 0.655628 | 8.3:+36786829 | MS.gene71236:CDS |
| TCATCTCACCAATTTCGGCA+AGG | 0.656399 | 8.3:-36786916 | None:intergenic |
| TGGGAGGGAGACAATCTAGT+GGG | 0.658573 | 8.3:+36785769 | MS.gene71236:CDS |
| AAACATCCAGAGTAAGAAGG+TGG | 0.658683 | 8.3:+36786463 | MS.gene71236:CDS |
| GGAGGAACCCAGTGAACTGG+AGG | 0.660570 | 8.3:+36786964 | MS.gene71236:CDS |
| GGCTTCAATTCCATTCTCCG+AGG | 0.660851 | 8.3:+36786748 | MS.gene71236:CDS |
| AGTGGGTGACAAGCATGGAG+TGG | 0.664909 | 8.3:-36786018 | None:intergenic |
| TCACTTGCATCAAAATCATG+AGG | 0.674635 | 8.3:-36786518 | None:intergenic |
| TGTACCCGGCATTTGCCAAG+AGG | 0.676826 | 8.3:+36787512 | MS.gene71236:CDS |
| AATAGTGAAACCAACAGATG+AGG | 0.677779 | 8.3:+36786232 | MS.gene71236:CDS |
| GAGGGAGACAATCTAGTGGG+AGG | 0.681797 | 8.3:+36785772 | MS.gene71236:CDS |
| GAGAATGGAATTGAAGCCTG+AGG | 0.682346 | 8.3:-36786743 | None:intergenic |
| ATGGGAGGGAGACAATCTAG+TGG | 0.684867 | 8.3:+36785768 | MS.gene71236:CDS |
| TAGGTCAGAAACAGATACAG+AGG | 0.685042 | 8.3:+36787548 | MS.gene71236:CDS |
| GGTGATGGAGAATATCCTGA+GGG | 0.691024 | 8.3:+36787229 | MS.gene71236:CDS |
| ATTGTACGAGAGCATTGAGG+AGG | 0.691111 | 8.3:+36787195 | MS.gene71236:CDS |
| TCAATGTACTCTCTACCAAG+CGG | 0.695082 | 8.3:-36785735 | None:intergenic |
| TACGATGCACAGTAGTAACA+GGG | 0.699460 | 8.3:-36786559 | None:intergenic |
| AGGTGATGGAGAATATCCTG+AGG | 0.699576 | 8.3:+36787228 | MS.gene71236:CDS |
| ATGACTAGGGAGTTTCGCAG+TGG | 0.731477 | 8.3:+36786938 | MS.gene71236:CDS |
| TCATCTTCAAAACTGGCACG+AGG | 0.736726 | 8.3:-36787578 | None:intergenic |
| CTTAACACGGACAGGCACGG+TGG | 0.765035 | 8.3:+36786605 | MS.gene71236:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAATTCCTATTGATCAT+GGG | + | chr8.3:36786669-36786688 | MS.gene71236:CDS | 20.0% |
| !!! | AATTTGTTAGTTAGAAAAGT+CGG | + | chr8.3:36786629-36786648 | MS.gene71236:CDS | 20.0% |
| ! | GATTTAATTCCTATTGATCA+TGG | + | chr8.3:36786668-36786687 | MS.gene71236:CDS | 25.0% |
| ! | TCAATATTTAATGTCAACGA+TGG | + | chr8.3:36786428-36786447 | MS.gene71236:CDS | 25.0% |
| !! | ATTTGTTAGTTAGAAAAGTC+GGG | + | chr8.3:36786630-36786649 | MS.gene71236:CDS | 25.0% |
| !! | TACATTGAGAAAAAAAGCAT+GGG | + | chr8.3:36785750-36785769 | MS.gene71236:CDS | 25.0% |
| AAGAGGAAATCCATAACTAT+AGG | + | chr8.3:36787529-36787548 | MS.gene71236:CDS | 30.0% | |
| AATGAATCCACTCAAAGTAT+GGG | - | chr8.3:36786721-36786740 | None:intergenic | 30.0% | |
| AGACATTAGGATTCTTAACA+CGG | + | chr8.3:36786592-36786611 | MS.gene71236:CDS | 30.0% | |
| GTACATTGAGAAAAAAAGCA+TGG | + | chr8.3:36785749-36785768 | MS.gene71236:CDS | 30.0% | |
| GTATAGGGATATTAGACATT+AGG | + | chr8.3:36786579-36786598 | MS.gene71236:CDS | 30.0% | |
| TATAGTTATGGATTTCCTCT+TGG | - | chr8.3:36787530-36787549 | None:intergenic | 30.0% | |
| TATTACTTCCTGAACAAAAG+AGG | + | chr8.3:36786197-36786216 | MS.gene71236:CDS | 30.0% | |
| TATTATGAAGCATATGGTCA+AGG | + | chr8.3:36786109-36786128 | MS.gene71236:CDS | 30.0% | |
| TTTAGAAGCAAGGAATATGT+TGG | + | chr8.3:36786994-36787013 | MS.gene71236:CDS | 30.0% | |
| TTTGTTAGTTAGAAAAGTCG+GGG | + | chr8.3:36786631-36786650 | MS.gene71236:CDS | 30.0% | |
| ! | AAAACCTTTTGGATTGTTAG+GGG | - | chr8.3:36786267-36786286 | None:intergenic | 30.0% |
| ! | ACAAAACCTTTTGGATTGTT+AGG | - | chr8.3:36786269-36786288 | None:intergenic | 30.0% |
| ! | CAAAACCTTTTGGATTGTTA+GGG | - | chr8.3:36786268-36786287 | None:intergenic | 30.0% |
| ! | TTTTTGTGCAAACTGAAACT+GGG | + | chr8.3:36785802-36785821 | MS.gene71236:CDS | 30.0% |
| !! | AAAGCAGATAATGGATGTTA+TGG | + | chr8.3:36787364-36787383 | MS.gene71236:CDS | 30.0% |
| !! | AACAATCCAAAAGGTTTTGT+TGG | + | chr8.3:36786269-36786288 | MS.gene71236:CDS | 30.0% |
| !! | AAGCAGATAATGGATGTTAT+GGG | + | chr8.3:36787365-36787384 | MS.gene71236:CDS | 30.0% |
| !! | ATTTTGATGCAAGTGACTAT+GGG | + | chr8.3:36786525-36786544 | MS.gene71236:CDS | 30.0% |
| AAATTGGTGAGATGATGACT+AGG | + | chr8.3:36786924-36786943 | MS.gene71236:CDS | 35.0% | |
| AAGGAATATGTTGGCAGAAA+GGG | + | chr8.3:36787003-36787022 | MS.gene71236:CDS | 35.0% | |
| AATAGTGAAACCAACAGATG+AGG | + | chr8.3:36786232-36786251 | MS.gene71236:CDS | 35.0% | |
| AATTGGTGAGATGATGACTA+GGG | + | chr8.3:36786925-36786944 | MS.gene71236:CDS | 35.0% | |
| AGGTTGTTTGTTTAGAAGCA+AGG | + | chr8.3:36786984-36787003 | MS.gene71236:CDS | 35.0% | |
| AGTCATCATCTCACCAATTT+CGG | - | chr8.3:36786924-36786943 | None:intergenic | 35.0% | |
| ATATAGACTGTGATGTAGCT+GGG | + | chr8.3:36787074-36787093 | MS.gene71236:CDS | 35.0% | |
| ATCCAATTCCAGTGAATAGT+GGG | + | chr8.3:36786162-36786181 | MS.gene71236:CDS | 35.0% | |
| ATGCAGCAAAAAGATAAGAG+TGG | + | chr8.3:36786050-36786069 | MS.gene71236:CDS | 35.0% | |
| CAATGAATCCACTCAAAGTA+TGG | - | chr8.3:36786722-36786741 | None:intergenic | 35.0% | |
| CATCACAGTCTATATCAAAC+AGG | - | chr8.3:36787069-36787088 | None:intergenic | 35.0% | |
| CCATATGCTTCATAATATCC+AGG | - | chr8.3:36786106-36786125 | None:intergenic | 35.0% | |
| CCTGGATATTATGAAGCATA+TGG | + | chr8.3:36786103-36786122 | MS.gene71236:CDS | 35.0% | |
| GAAAAACATCCAGAGTAAGA+AGG | + | chr8.3:36786460-36786479 | MS.gene71236:CDS | 35.0% | |
| GCTTTCTTACATCGAAAATC+TGG | + | chr8.3:36786775-36786794 | MS.gene71236:CDS | 35.0% | |
| TATCATTCCGAACAGAACTA+AGG | - | chr8.3:36785956-36785975 | None:intergenic | 35.0% | |
| TCACTTGCATCAAAATCATG+AGG | - | chr8.3:36786521-36786540 | None:intergenic | 35.0% | |
| TCTCGTACAATTTGGAGAAT+GGG | - | chr8.3:36787186-36787205 | None:intergenic | 35.0% | |
| TGAGTGAGTAATCTTCACTA+AGG | - | chr8.3:36786411-36786430 | None:intergenic | 35.0% | |
| TGTTATGGGAATACATCATC+TGG | + | chr8.3:36787379-36787398 | MS.gene71236:CDS | 35.0% | |
| TTACTACTGTGCATCGTATA+GGG | + | chr8.3:36786564-36786583 | MS.gene71236:CDS | 35.0% | |
| ! | AAGAGAGCTCTCTAACTTTT+GGG | + | chr8.3:36785910-36785929 | MS.gene71236:CDS | 35.0% |
| ! | ATTGAGAAAAAAAGCATGGG+AGG | + | chr8.3:36785753-36785772 | MS.gene71236:CDS | 35.0% |
| ! | CATACTTTGAGTGGATTCAT+TGG | + | chr8.3:36786720-36786739 | MS.gene71236:CDS | 35.0% |
| ! | GTTTTTGTGCAAACTGAAAC+TGG | + | chr8.3:36785801-36785820 | MS.gene71236:CDS | 35.0% |
| ! | TTGAGAAAAAAAGCATGGGA+GGG | + | chr8.3:36785754-36785773 | MS.gene71236:CDS | 35.0% |
| !! | ACAATGACCTTAGTTCTGTT+CGG | + | chr8.3:36785946-36785965 | MS.gene71236:CDS | 35.0% |
| !! | CTGTTTCTGACCTATAGTTA+TGG | - | chr8.3:36787542-36787561 | None:intergenic | 35.0% |
| !! | GATTTTGATGCAAGTGACTA+TGG | + | chr8.3:36786524-36786543 | MS.gene71236:CDS | 35.0% |
| !!! | ACAGAAAGTTTTGAAACTGC+TGG | - | chr8.3:36787283-36787302 | None:intergenic | 35.0% |
| !!! | AGAAAGTTTTGAAACTGCTG+GGG | - | chr8.3:36787281-36787300 | None:intergenic | 35.0% |
| !!! | CAGAAAGTTTTGAAACTGCT+GGG | - | chr8.3:36787282-36787301 | None:intergenic | 35.0% |
| AAACATCCAGAGTAAGAAGG+TGG | + | chr8.3:36786463-36786482 | MS.gene71236:CDS | 40.0% | |
| AACATCTCACAATCTTGAGC+AGG | - | chr8.3:36786803-36786822 | None:intergenic | 40.0% | |
| AACTGAAACTGGGTGTGTAT+TGG | + | chr8.3:36785812-36785831 | MS.gene71236:CDS | 40.0% | |
| AAGGTTACGCGTAAGAAGAA+GGG | - | chr8.3:36785982-36786001 | None:intergenic | 40.0% | |
| AATGTCAACGATGGAGTCAA+TGG | + | chr8.3:36786437-36786456 | MS.gene71236:CDS | 40.0% | |
| ACAATGCTCATACTGTGAAG+AGG | + | chr8.3:36785856-36785875 | MS.gene71236:CDS | 40.0% | |
| ACTGAAACTGGGTGTGTATT+GGG | + | chr8.3:36785813-36785832 | MS.gene71236:CDS | 40.0% | |
| AGAGAAACTGATCTGGTTAG+AGG | - | chr8.3:36787133-36787152 | None:intergenic | 40.0% | |
| AGATGCATGGACAATGTTTC+TGG | + | chr8.3:36787471-36787490 | MS.gene71236:CDS | 40.0% | |
| AGTGGTCCTATTGAGATAGT+AGG | + | chr8.3:36786068-36786087 | MS.gene71236:CDS | 40.0% | |
| ATACGATGCACAGTAGTAAC+AGG | - | chr8.3:36786563-36786582 | None:intergenic | 40.0% | |
| ATGTCAACGATGGAGTCAAT+GGG | + | chr8.3:36786438-36786457 | MS.gene71236:CDS | 40.0% | |
| ATTGTGAAGGCAATGCAGAT+GGG | + | chr8.3:36786134-36786153 | MS.gene71236:CDS | 40.0% | |
| CAAGGAATATGTTGGCAGAA+AGG | + | chr8.3:36787002-36787021 | MS.gene71236:CDS | 40.0% | |
| CTCAAGATTGTGAGATGTTG+CGG | + | chr8.3:36786804-36786823 | MS.gene71236:CDS | 40.0% | |
| CTCAATGCTCTCGTACAATT+TGG | - | chr8.3:36787194-36787213 | None:intergenic | 40.0% | |
| CTCTCGTACAATTTGGAGAA+TGG | - | chr8.3:36787187-36787206 | None:intergenic | 40.0% | |
| CTGAATGCTTCTGGTATTTC+TGG | - | chr8.3:36787339-36787358 | None:intergenic | 40.0% | |
| CTGATATGACTGAAGATGCA+TGG | + | chr8.3:36787458-36787477 | MS.gene71236:CDS | 40.0% | |
| GATATAGACTGTGATGTAGC+TGG | + | chr8.3:36787073-36787092 | MS.gene71236:CDS | 40.0% | |
| GATCCAATTCCAGTGAATAG+TGG | + | chr8.3:36786161-36786180 | MS.gene71236:CDS | 40.0% | |
| GATGTAAGAAAGCTCATCCT+CGG | - | chr8.3:36786768-36786787 | None:intergenic | 40.0% | |
| GATTGCCCTACTATCTCAAT+AGG | - | chr8.3:36786077-36786096 | None:intergenic | 40.0% | |
| GCTGCTTATCTACTTGACTA+TGG | + | chr8.3:36786359-36786378 | MS.gene71236:CDS | 40.0% | |
| GTAATCTTCACTAAGGCAGT+CGG | - | chr8.3:36786404-36786423 | None:intergenic | 40.0% | |
| GTGGTCCTATTGAGATAGTA+GGG | + | chr8.3:36786069-36786088 | MS.gene71236:CDS | 40.0% | |
| GTTACTACTGTGCATCGTAT+AGG | + | chr8.3:36786563-36786582 | MS.gene71236:CDS | 40.0% | |
| TAAGGTTACGCGTAAGAAGA+AGG | - | chr8.3:36785983-36786002 | None:intergenic | 40.0% | |
| TACGATGCACAGTAGTAACA+GGG | - | chr8.3:36786562-36786581 | None:intergenic | 40.0% | |
| TAGGTCAGAAACAGATACAG+AGG | + | chr8.3:36787548-36787567 | MS.gene71236:CDS | 40.0% | |
| TATGGTCAAGGACATTGTGA+AGG | + | chr8.3:36786121-36786140 | MS.gene71236:CDS | 40.0% | |
| TCAATGTACTCTCTACCAAG+CGG | - | chr8.3:36785738-36785757 | None:intergenic | 40.0% | |
| TCAGGTGGAAAAGCAGATAA+TGG | + | chr8.3:36787355-36787374 | MS.gene71236:CDS | 40.0% | |
| TGGATGAACTTCTGTGCATA+AGG | - | chr8.3:36786001-36786020 | None:intergenic | 40.0% | |
| TTAGAGAGCTCTCTTCAGTT+GGG | - | chr8.3:36785905-36785924 | None:intergenic | 40.0% | |
| TTAGGATTCTTAACACGGAC+AGG | + | chr8.3:36786597-36786616 | MS.gene71236:CDS | 40.0% | |
| TTTGCCCCTAACAATCCAAA+AGG | + | chr8.3:36786260-36786279 | MS.gene71236:CDS | 40.0% | |
| TTTGGATTGTTAGGGGCAAA+AGG | - | chr8.3:36786260-36786279 | None:intergenic | 40.0% | |
| ! | AAGCAACAGCCATTTGAGTT+TGG | - | chr8.3:36785704-36785723 | None:intergenic | 40.0% |
| ! | AAGTTCAAGCTTTGTGAAGC+TGG | + | chr8.3:36787435-36787454 | MS.gene71236:CDS | 40.0% |
| ! | AGAGAGCTCTCTAACTTTTG+GGG | + | chr8.3:36785911-36785930 | MS.gene71236:CDS | 40.0% |
| ! | AGGTTTGAAACGTTCAGTTC+GGG | + | chr8.3:36786310-36786329 | MS.gene71236:CDS | 40.0% |
| ! | CAGGTTTGAAACGTTCAGTT+CGG | + | chr8.3:36786309-36786328 | MS.gene71236:CDS | 40.0% |
| ! | GAAGAGAGCTCTCTAACTTT+TGG | + | chr8.3:36785909-36785928 | MS.gene71236:CDS | 40.0% |
| ! | GCTTTGCCAACAAAACCTTT+TGG | - | chr8.3:36786278-36786297 | None:intergenic | 40.0% |
| ! | TCTCACTCTGAAGATGACAA+TGG | + | chr8.3:36787102-36787121 | MS.gene71236:CDS | 40.0% |
| !! | AAATACCAGAAGCATTCAGG+TGG | + | chr8.3:36787340-36787359 | MS.gene71236:CDS | 40.0% |
| !! | CAAATTGTACGAGAGCATTG+AGG | + | chr8.3:36787192-36787211 | MS.gene71236:CDS | 40.0% |
| !! | CAGAAATACCAGAAGCATTC+AGG | + | chr8.3:36787337-36787356 | MS.gene71236:CDS | 40.0% |
| ACAAACAACCTCCAGTTCAC+TGG | - | chr8.3:36786975-36786994 | None:intergenic | 45.0% | |
| AGATTGTGAGATGTTGCGGA+AGG | + | chr8.3:36786808-36786827 | MS.gene71236:CDS | 45.0% | |
| AGCCCACTATTCACTGGAAT+TGG | - | chr8.3:36786167-36786186 | None:intergenic | 45.0% | |
| AGGCAAAGCCCATGATCAAT+AGG | - | chr8.3:36786680-36786699 | None:intergenic | 45.0% | |
| ATGCTCATACTGTGAAGAGG+AGG | + | chr8.3:36785859-36785878 | MS.gene71236:CDS | 45.0% | |
| ATTCTTAACACGGACAGGCA+CGG | + | chr8.3:36786602-36786621 | MS.gene71236:CDS | 45.0% | |
| ATTGAGGAGGAGGAAGAAGA+AGG | + | chr8.3:36787208-36787227 | MS.gene71236:CDS | 45.0% | |
| ATTTCCTCTTGGCAAATGCC+GGG | - | chr8.3:36787519-36787538 | None:intergenic | 45.0% | |
| CAAACAACCTCCAGTTCACT+GGG | - | chr8.3:36786974-36786993 | None:intergenic | 45.0% | |
| CAGAAACAGATACAGAGGCT+TGG | + | chr8.3:36787553-36787572 | MS.gene71236:CDS | 45.0% | |
| CATTGTGAAGGCAATGCAGA+TGG | + | chr8.3:36786133-36786152 | MS.gene71236:CDS | 45.0% | |
| CGAACTGAACGTTTCAAACC+TGG | - | chr8.3:36786311-36786330 | None:intergenic | 45.0% | |
| GAAGGAACTGCCTATGATTC+GGG | + | chr8.3:36786826-36786845 | MS.gene71236:CDS | 45.0% | |
| GAGAATGGAATTGAAGCCTG+AGG | - | chr8.3:36786746-36786765 | None:intergenic | 45.0% | |
| GATTTCCTCTTGGCAAATGC+CGG | - | chr8.3:36787520-36787539 | None:intergenic | 45.0% | |
| GGAAAAGTGACAAAACCCTC+AGG | - | chr8.3:36787247-36787266 | None:intergenic | 45.0% | |
| GGAAGGAACTGCCTATGATT+CGG | + | chr8.3:36786825-36786844 | MS.gene71236:CDS | 45.0% | |
| GTGTGTATTGGGCATGGAAT+TGG | + | chr8.3:36785824-36785843 | MS.gene71236:CDS | 45.0% | |
| GTTAGAGAGCTCTCTTCAGT+TGG | - | chr8.3:36785906-36785925 | None:intergenic | 45.0% | |
| TCATCTCACCAATTTCGGCA+AGG | - | chr8.3:36786919-36786938 | None:intergenic | 45.0% | |
| TGCTAACCACCTTCTTACTC+TGG | - | chr8.3:36786472-36786491 | None:intergenic | 45.0% | |
| TTGAAACGTTCAGTTCGGGT+TGG | + | chr8.3:36786314-36786333 | MS.gene71236:CDS | 45.0% | |
| TTGTGAAGGCAATGCAGATG+GGG | + | chr8.3:36786135-36786154 | MS.gene71236:CDS | 45.0% | |
| ! | ACAGCCATTTGAGTTTGGAC+AGG | - | chr8.3:36785699-36785718 | None:intergenic | 45.0% |
| ! | ACTCTGCACCATTTTCCTGA+AGG | + | chr8.3:36786871-36786890 | MS.gene71236:CDS | 45.0% |
| ! | CAGCCATTTGAGTTTGGACA+GGG | - | chr8.3:36785698-36785717 | None:intergenic | 45.0% |
| ! | CTTTTCCACCTGAATGCTTC+TGG | - | chr8.3:36787348-36787367 | None:intergenic | 45.0% |
| ! | GTTAGAAAAGTCGGGGCTTT+TGG | + | chr8.3:36786638-36786657 | MS.gene71236:CDS | 45.0% |
| ! | TGAAACGTTCAGTTCGGGTT+GGG | + | chr8.3:36786315-36786334 | MS.gene71236:CDS | 45.0% |
| !! | AGGTGATGGAGAATATCCTG+AGG | + | chr8.3:36787228-36787247 | MS.gene71236:CDS | 45.0% |
| !! | ATCTCCACAGACTGACTTGA+GGG | + | chr8.3:36787033-36787052 | MS.gene71236:CDS | 45.0% |
| !! | ATTCCAGTGAATAGTGGGCT+TGG | + | chr8.3:36786167-36786186 | MS.gene71236:CDS | 45.0% |
| !! | ATTGTACGAGAGCATTGAGG+AGG | + | chr8.3:36787195-36787214 | MS.gene71236:CDS | 45.0% |
| !! | GCTTTATTTCGTAGTCCGCT+TGG | + | chr8.3:36785720-36785739 | MS.gene71236:CDS | 45.0% |
| !! | GGTGATGGAGAATATCCTGA+GGG | + | chr8.3:36787229-36787248 | MS.gene71236:CDS | 45.0% |
| !! | TATCTCCACAGACTGACTTG+AGG | + | chr8.3:36787032-36787051 | MS.gene71236:CDS | 45.0% |
| !!! | ACTGCTGGGGTTTTTTCATG+AGG | - | chr8.3:36787268-36787287 | None:intergenic | 45.0% |
| !!! | GGTTTTGTTGGCAAAGCTCT+TGG | + | chr8.3:36786281-36786300 | MS.gene71236:CDS | 45.0% |
| AACTGGGTGTGTATTGGGCA+TGG | + | chr8.3:36785818-36785837 | MS.gene71236:CDS | 50.0% | |
| AAGCAAGCCTCCCGAATCAT+AGG | - | chr8.3:36786839-36786858 | None:intergenic | 50.0% | |
| ACCAGATCAGTTTCTCTCCC+TGG | + | chr8.3:36787136-36787155 | MS.gene71236:CDS | 50.0% | |
| AGACTGTGATGTAGCTGGGT+CGG | + | chr8.3:36787078-36787097 | MS.gene71236:CDS | 50.0% | |
| AGCAGCCTCCTTCAGGAAAA+TGG | - | chr8.3:36786882-36786901 | None:intergenic | 50.0% | |
| AGTAGGGCAATCAAGTAGCC+TGG | + | chr8.3:36786085-36786104 | MS.gene71236:CDS | 50.0% | |
| ATCTTCACTAAGGCAGTCGG+AGG | - | chr8.3:36786401-36786420 | None:intergenic | 50.0% | |
| ATGACTAGGGAGTTTCGCAG+TGG | + | chr8.3:36786938-36786957 | MS.gene71236:CDS | 50.0% | |
| ATGGGAGGGAGACAATCTAG+TGG | + | chr8.3:36785768-36785787 | MS.gene71236:CDS | 50.0% | |
| CAGCCCTGTCCAAACTCAAA+TGG | + | chr8.3:36785692-36785711 | MS.gene71236:CDS | 50.0% | |
| CATTCCCGTTTCCAAGTCCA+GGG | - | chr8.3:36787156-36787175 | None:intergenic | 50.0% | |
| GAAAGCTCATCCTCGGAGAA+TGG | - | chr8.3:36786761-36786780 | None:intergenic | 50.0% | |
| GAGGAGGAAGAAGAAGGTGA+TGG | + | chr8.3:36787214-36787233 | MS.gene71236:CDS | 50.0% | |
| GCAAAAGGCTCCTCATCTGT+TGG | - | chr8.3:36786245-36786264 | None:intergenic | 50.0% | |
| GCAAGTGACTATGGGACATC+TGG | + | chr8.3:36786533-36786552 | MS.gene71236:CDS | 50.0% | |
| GCTTTGCCTTCCAGAAGCTT+TGG | + | chr8.3:36786691-36786710 | MS.gene71236:CDS | 50.0% | |
| GGCTTCAATTCCATTCTCCG+AGG | + | chr8.3:36786748-36786767 | MS.gene71236:CDS | 50.0% | |
| GTTTCAAGAGCTGCTGTACC+CGG | + | chr8.3:36787498-36787517 | MS.gene71236:CDS | 50.0% | |
| TATGGGTCCTCCAAAGCTTC+TGG | - | chr8.3:36786704-36786723 | None:intergenic | 50.0% | |
| TCAGTTTCTCTCCCTGGACT+TGG | + | chr8.3:36787142-36787161 | MS.gene71236:CDS | 50.0% | |
| TCATCCCTCAAGTCAGTCTG+TGG | - | chr8.3:36787040-36787059 | None:intergenic | 50.0% | |
| TCCAGGGAGAGAAACTGATC+TGG | - | chr8.3:36787140-36787159 | None:intergenic | 50.0% | |
| TCTCTCCCTGGACTTGGAAA+CGG | + | chr8.3:36787148-36787167 | MS.gene71236:CDS | 50.0% | |
| TGCAGAAAGCTGCTGCTCAT+TGG | - | chr8.3:36787416-36787435 | None:intergenic | 50.0% | |
| TGCTGCATATCTCGTCCAGT+GGG | - | chr8.3:36786038-36786057 | None:intergenic | 50.0% | |
| TGGAGGACCCATACTTTGAG+TGG | + | chr8.3:36786711-36786730 | MS.gene71236:CDS | 50.0% | |
| TGGGAGGGAGACAATCTAGT+GGG | + | chr8.3:36785769-36785788 | MS.gene71236:CDS | 50.0% | |
| TTGCTGCATATCTCGTCCAG+TGG | - | chr8.3:36786039-36786058 | None:intergenic | 50.0% | |
| ! | AAAAGTCGGGGCTTTTGGTG+AGG | + | chr8.3:36786643-36786662 | MS.gene71236:CDS | 50.0% |
| ! | CACTCTCGCCTCTTTTGTTC+AGG | - | chr8.3:36786208-36786227 | None:intergenic | 50.0% |
| ! | CTGCACCATTTTCCTGAAGG+AGG | + | chr8.3:36786874-36786893 | MS.gene71236:CDS | 50.0% |
| ! | TGAGTGGATTCATTGGCCTC+AGG | + | chr8.3:36786727-36786746 | MS.gene71236:CDS | 50.0% |
| ! | TTGCCTTCCAGAAGCTTTGG+AGG | + | chr8.3:36786694-36786713 | MS.gene71236:CDS | 50.0% |
| !! | GAAACGTTCAGTTCGGGTTG+GGG | + | chr8.3:36786316-36786335 | MS.gene71236:CDS | 50.0% |
| ACTCCATGCTTGTCACCCAC+TGG | + | chr8.3:36786020-36786039 | MS.gene71236:CDS | 55.0% | |
| AGTGGGTGACAAGCATGGAG+TGG | - | chr8.3:36786021-36786040 | None:intergenic | 55.0% | |
| CCATTCCCGTTTCCAAGTCC+AGG | - | chr8.3:36787157-36787176 | None:intergenic | 55.0% | |
| CCTCCAAGCCCACTATTCAC+TGG | - | chr8.3:36786173-36786192 | None:intergenic | 55.0% | |
| CCTGGACTTGGAAACGGGAA+TGG | + | chr8.3:36787154-36787173 | MS.gene71236:CDS | 55.0% | |
| CTCTCCCTGGACTTGGAAAC+GGG | + | chr8.3:36787149-36787168 | MS.gene71236:CDS | 55.0% | |
| GAGGGAGACAATCTAGTGGG+AGG | + | chr8.3:36785772-36785791 | MS.gene71236:CDS | 55.0% | |
| GGCAAAGCTCTTGGACAACC+AGG | + | chr8.3:36786290-36786309 | MS.gene71236:CDS | 55.0% | |
| GGTCCTCCAAAGCTTCTGGA+AGG | - | chr8.3:36786700-36786719 | None:intergenic | 55.0% | |
| GGTCTGTGCCTTGCCGAAAT+TGG | + | chr8.3:36786908-36786927 | MS.gene71236:CDS | 55.0% | |
| TAGGGAGTTTCGCAGTGGTG+AGG | + | chr8.3:36786943-36786962 | MS.gene71236:CDS | 55.0% | |
| TGAGGAGGAACCCAGTGAAC+TGG | + | chr8.3:36786961-36786980 | MS.gene71236:CDS | 55.0% | |
| TGTACCCGGCATTTGCCAAG+AGG | + | chr8.3:36787512-36787531 | MS.gene71236:CDS | 55.0% | |
| TTCGGCAAGGCACAGACCAT+AGG | - | chr8.3:36786906-36786925 | None:intergenic | 55.0% | |
| ! | GGAACTGCCTATGATTCGGG+AGG | + | chr8.3:36786829-36786848 | MS.gene71236:CDS | 55.0% |
| ! | GGTTGGGGAAACTGGCTTCA+GGG | + | chr8.3:36786331-36786350 | MS.gene71236:CDS | 55.0% |
| !! | CCAGTGAATAGTGGGCTTGG+AGG | + | chr8.3:36786170-36786189 | MS.gene71236:CDS | 55.0% |
| !! | GTACGAGAGCATTGAGGAGG+AGG | + | chr8.3:36787198-36787217 | MS.gene71236:CDS | 55.0% |
| !! | TCAGTTCGGGTTGGGGAAAC+TGG | + | chr8.3:36786323-36786342 | MS.gene71236:CDS | 55.0% |
| CATAGGCAGCAGCCTCCTTC+AGG | - | chr8.3:36786889-36786908 | None:intergenic | 60.0% | |
| CGTCCAGTGGGTGACAAGCA+TGG | - | chr8.3:36786026-36786045 | None:intergenic | 60.0% | |
| CTGAAGGAGGCTGCTGCCTA+TGG | + | chr8.3:36786887-36786906 | MS.gene71236:CDS | 60.0% | |
| CTTAACACGGACAGGCACGG+TGG | + | chr8.3:36786605-36786624 | MS.gene71236:CDS | 60.0% | |
| GGAGGAACCCAGTGAACTGG+AGG | + | chr8.3:36786964-36786983 | MS.gene71236:CDS | 60.0% | |
| GGAGTTTCGCAGTGGTGAGG+AGG | + | chr8.3:36786946-36786965 | MS.gene71236:CDS | 60.0% | |
| ! | AGTCGGGGCTTTTGGTGAGG+TGG | + | chr8.3:36786646-36786665 | MS.gene71236:CDS | 60.0% |
| ! | GGGTTGGGGAAACTGGCTTC+AGG | + | chr8.3:36786330-36786349 | MS.gene71236:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 36785675 | 36787594 | 36785675 | ID=MS.gene71236 |
| chr8.3 | mRNA | 36785675 | 36787594 | 36785675 | ID=MS.gene71236.t1;Parent=MS.gene71236 |
| chr8.3 | exon | 36785675 | 36787594 | 36785675 | ID=MS.gene71236.t1.exon1;Parent=MS.gene71236.t1 |
| chr8.3 | CDS | 36785675 | 36787594 | 36785675 | ID=cds.MS.gene71236.t1;Parent=MS.gene71236.t1 |
| Gene Sequence |
| Protein sequence |
