Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62152.t1 | XP_013443501.1 | 97.7 | 640 | 15 | 0 | 1 | 640 | 1 | 640 | 0.00E+00 | 1231.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62152.t1 | Q9SI52 | 69.0 | 665 | 166 | 11 | 1 | 640 | 1 | 650 | 1.9e-243 | 843.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62152.t1 | A0A072TK16 | 97.7 | 640 | 15 | 0 | 1 | 640 | 1 | 640 | 0.0e+00 | 1231.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055339 | MS.gene62152 | 0.840994 | 6.22E-58 | -1.69E-46 |
| MS.gene05894 | MS.gene62152 | 0.803714 | 3.06E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene62152 | MS.gene038501 | PPI |
| MS.gene58968 | MS.gene62152 | PPI |
| MS.gene66860 | MS.gene62152 | PPI |
| MS.gene009056 | MS.gene62152 | PPI |
| MS.gene038501 | MS.gene62152 | PPI |
| MS.gene61052 | MS.gene62152 | PPI |
| MS.gene71236 | MS.gene62152 | PPI |
| MS.gene029676 | MS.gene62152 | PPI |
| MS.gene62152 | MS.gene61052 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62152.t1 | MTR_0009s0120 | 98.125 | 640 | 12 | 0 | 1 | 640 | 1 | 640 | 0.0 | 1299 |
| MS.gene62152.t1 | MTR_8g066090 | 77.399 | 646 | 134 | 4 | 1 | 640 | 1 | 640 | 0.0 | 988 |
| MS.gene62152.t1 | MTR_7g017360 | 65.625 | 608 | 199 | 5 | 36 | 640 | 32 | 632 | 0.0 | 780 |
| MS.gene62152.t1 | MTR_5g009120 | 40.317 | 315 | 163 | 6 | 152 | 453 | 254 | 556 | 1.83e-61 | 215 |
| MS.gene62152.t1 | MTR_8g099565 | 42.069 | 290 | 138 | 8 | 158 | 431 | 273 | 548 | 3.24e-61 | 214 |
| MS.gene62152.t1 | MTR_3g091400 | 39.535 | 301 | 152 | 7 | 148 | 431 | 247 | 534 | 1.17e-58 | 207 |
| MS.gene62152.t1 | MTR_8g027610 | 39.731 | 297 | 141 | 8 | 155 | 431 | 269 | 547 | 2.55e-58 | 206 |
| MS.gene62152.t1 | MTR_7g117395 | 41.135 | 282 | 132 | 7 | 166 | 431 | 284 | 547 | 2.71e-56 | 201 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62152.t1 | AT2G03890 | 67.970 | 665 | 173 | 11 | 1 | 640 | 1 | 650 | 0.0 | 870 |
| MS.gene62152.t1 | AT1G26270 | 68.062 | 645 | 186 | 10 | 1 | 640 | 1 | 630 | 0.0 | 857 |
| MS.gene62152.t1 | AT1G13640 | 66.094 | 640 | 187 | 9 | 13 | 640 | 1 | 622 | 0.0 | 819 |
| MS.gene62152.t1 | AT1G13640 | 66.094 | 640 | 187 | 9 | 13 | 640 | 1 | 622 | 0.0 | 819 |
| MS.gene62152.t1 | AT2G03890 | 62.288 | 472 | 142 | 9 | 187 | 640 | 77 | 530 | 0.0 | 543 |
| MS.gene62152.t1 | AT2G03890 | 66.667 | 105 | 24 | 3 | 1 | 98 | 1 | 101 | 4.72e-33 | 134 |
| MS.gene62152.t1 | AT3G56600 | 40.687 | 553 | 241 | 11 | 108 | 640 | 48 | 533 | 2.45e-121 | 371 |
| MS.gene62152.t1 | AT3G56600 | 40.687 | 553 | 241 | 11 | 108 | 640 | 51 | 536 | 3.13e-121 | 370 |
| MS.gene62152.t1 | AT3G56600 | 40.687 | 553 | 241 | 11 | 108 | 640 | 51 | 536 | 3.13e-121 | 370 |
| MS.gene62152.t1 | AT2G40850 | 42.144 | 541 | 255 | 16 | 112 | 640 | 67 | 561 | 6.82e-119 | 365 |
| MS.gene62152.t1 | AT5G24240 | 39.763 | 337 | 169 | 8 | 148 | 471 | 242 | 557 | 1.90e-64 | 223 |
| MS.gene62152.t1 | AT5G24240 | 39.763 | 337 | 169 | 8 | 148 | 471 | 242 | 557 | 1.90e-64 | 223 |
| MS.gene62152.t1 | AT2G46500 | 35.363 | 427 | 213 | 11 | 47 | 431 | 115 | 520 | 7.11e-64 | 221 |
| MS.gene62152.t1 | AT2G46500 | 35.363 | 427 | 213 | 11 | 47 | 431 | 115 | 520 | 7.11e-64 | 221 |
| MS.gene62152.t1 | AT2G46500 | 31.104 | 299 | 148 | 10 | 47 | 303 | 115 | 397 | 2.38e-23 | 103 |
Find 185 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATGATTGGACATTATTTC+TGG | 0.170465 | 5.1:-36016516 | MS.gene62152:CDS |
| TGAAAAGTTTCTCTGATTAA+AGG | 0.184139 | 5.1:+36016842 | None:intergenic |
| CTCAAAGAGGCTGCTGAATT+TGG | 0.201939 | 5.1:-36017085 | MS.gene62152:CDS |
| TAAGGATCCTCCAAAGTTTC+TGG | 0.229441 | 5.1:+36017271 | None:intergenic |
| CTCAATGCTCTCATCCAATT+TGG | 0.245000 | 5.1:+36016781 | None:intergenic |
| GGATCCTCCATTGCCATCTT+TGG | 0.251549 | 5.1:+36016863 | None:intergenic |
| ATCGATCCGGTTCCTGTTAA+TGG | 0.258185 | 5.1:-36017826 | MS.gene62152:CDS |
| GGTCTTTGTCTTGCTGAAAT+TGG | 0.272049 | 5.1:-36017064 | MS.gene62152:CDS |
| GTATAGGGATATTAGATATT+AGG | 0.275793 | 5.1:-36017405 | MS.gene62152:CDS |
| AGGTCAATGGGAATTGTTTC+CGG | 0.281282 | 5.1:-36017534 | MS.gene62152:CDS |
| TCATCACTTCAACTGCCATC+TGG | 0.288451 | 5.1:+36018283 | None:intergenic |
| GAAGAATCTCCTCAGGAATT+TGG | 0.298437 | 5.1:-36016737 | MS.gene62152:CDS |
| CTTTACCAACAAAACCTTTA+GGG | 0.300434 | 5.1:+36017710 | None:intergenic |
| GAAGAGAGTTCTCTTACTTT+TGG | 0.300456 | 5.1:-36018075 | MS.gene62152:CDS |
| ATTACGAAGCTTATGCTTGC+AGG | 0.312460 | 5.1:+36016557 | None:intergenic |
| GCCAAGCACACAACCCTTAT+CGG | 0.314484 | 5.1:+36018170 | None:intergenic |
| CAATGAATCCACTCAAAATA+AGG | 0.318986 | 5.1:+36017253 | None:intergenic |
| GGAGGTTGCGGCTTATCTTC+TGG | 0.319111 | 5.1:-36017632 | MS.gene62152:CDS |
| GCGCAGCCCACTCTCCAAAT+TGG | 0.319224 | 5.1:-36016795 | MS.gene62152:CDS |
| GAGTGGTCCTATTGAAATAT+TGG | 0.322225 | 5.1:-36017917 | MS.gene62152:CDS |
| TTTCAGCATGCACTTGGAAA+TGG | 0.327037 | 5.1:-36016824 | MS.gene62152:CDS |
| ACAAAACCTTTAGGGTTATT+AGG | 0.334352 | 5.1:+36017718 | None:intergenic |
| GCTTTACCAACAAAACCTTT+AGG | 0.335363 | 5.1:+36017709 | None:intergenic |
| ACTCCTTGTTTGTCCCCAAC+TGG | 0.339211 | 5.1:-36017964 | MS.gene62152:CDS |
| AGTGGTCCTATTGAAATATT+GGG | 0.341072 | 5.1:-36017916 | MS.gene62152:CDS |
| GCTGGATATCCCTCCCAGTT+GGG | 0.353656 | 5.1:+36017950 | None:intergenic |
| GGTGATGGCATTGGAACTTT+TGG | 0.354061 | 5.1:-36017334 | MS.gene62152:CDS |
| TCATGGTACGTCGAGCTTCC+CGG | 0.361544 | 5.1:-36017443 | MS.gene62152:CDS |
| GATTGCCCCAATATTTCAAT+AGG | 0.361720 | 5.1:+36017910 | None:intergenic |
| GACCACTCTTATCCCTTTGC+TGG | 0.361794 | 5.1:+36017932 | None:intergenic |
| GTTGCTTCGGTGCATCGTAT+AGG | 0.369514 | 5.1:-36017421 | MS.gene62152:CDS |
| ACTTGAGGTTGTTTGTTTAG+AGG | 0.380994 | 5.1:-36016993 | MS.gene62152:CDS |
| CCTCCAAGCCCACCATTAAC+AGG | 0.381577 | 5.1:+36017814 | None:intergenic |
| ATATTACTCAACTTCAAAAC+TGG | 0.381955 | 5.1:+36016402 | None:intergenic |
| GTTCCTGTTAATGGTGGGCT+TGG | 0.393474 | 5.1:-36017817 | MS.gene62152:CDS |
| CCTGTTAATGGTGGGCTTGG+AGG | 0.395549 | 5.1:-36017814 | MS.gene62152:CDS |
| TTGCTTCGGTGCATCGTATA+GGG | 0.398997 | 5.1:-36017420 | MS.gene62152:CDS |
| TCCTCCCAGCAGGTTGCCTC+TGG | 0.399427 | 5.1:+36018211 | None:intergenic |
| ACTGCCATCTGGGTCTGAAC+TGG | 0.399575 | 5.1:+36018294 | None:intergenic |
| AACTTGTTAGTTAGAAAAGT+TGG | 0.401570 | 5.1:-36017355 | MS.gene62152:CDS |
| TCTGGAGGAAAACCGGATAA+TGG | 0.407097 | 5.1:-36016623 | MS.gene62152:CDS |
| AATGGCTACTTTACATCATC+TGG | 0.408753 | 5.1:-36016605 | MS.gene62152:CDS |
| CGGGGTTGAAACGATCTGTT+CGG | 0.410422 | 5.1:-36017675 | MS.gene62152:CDS |
| TTGTGTGCTTGGCATGGAAT+TGG | 0.413437 | 5.1:-36018160 | MS.gene62152:CDS |
| TTCAGCATGCACTTGGAAAT+GGG | 0.413808 | 5.1:-36016823 | MS.gene62152:CDS |
| ACCGATAAGGGTTGTGTGCT+TGG | 0.414023 | 5.1:-36018171 | MS.gene62152:CDS |
| CAGATATGACCGAGGATGAT+TGG | 0.414158 | 5.1:-36016529 | MS.gene62152:CDS |
| TGATGACTCGCGAGTTCTAC+AGG | 0.416969 | 5.1:-36017036 | MS.gene62152:CDS |
| CCTTGATGTGATGAAACTTA+TGG | 0.418417 | 5.1:-36017881 | MS.gene62152:CDS |
| GTCGAGCTTCCCGGTTGCTT+CGG | 0.419259 | 5.1:-36017434 | MS.gene62152:CDS |
| TTTGATATTGATTGCGATGA+AGG | 0.420722 | 5.1:-36016902 | MS.gene62152:CDS |
| AGACAAGCCTCTCGAATCAT+TGG | 0.420945 | 5.1:+36017136 | None:intergenic |
| CATCACTTCAACTGCCATCT+GGG | 0.423030 | 5.1:+36018284 | None:intergenic |
| AGACAGAGCCCATGATCAAT+AGG | 0.433939 | 5.1:+36017295 | None:intergenic |
| TGCTGGATATCCCTCCCAGT+TGG | 0.434243 | 5.1:+36017949 | None:intergenic |
| ATACGATGCACCGAAGCAAC+CGG | 0.435535 | 5.1:+36017424 | None:intergenic |
| TGAGAGCATTGAGGAGGAAG+AGG | 0.438129 | 5.1:-36016771 | MS.gene62152:CDS |
| GCTTGCAGGCAGCTGCTCAT+TGG | 0.438654 | 5.1:+36016571 | None:intergenic |
| GTTTCAAGAGTTGCTGTATC+CGG | 0.439521 | 5.1:-36016489 | MS.gene62152:CDS |
| AGCATCTCGCAGTCATGAGC+AGG | 0.441218 | 5.1:+36017172 | None:intergenic |
| GCTGCTCATTGGCACTCCTA+TGG | 0.441500 | 5.1:+36016582 | None:intergenic |
| AGCCCACCATTAACAGGAAC+CGG | 0.441803 | 5.1:+36017820 | None:intergenic |
| GAGCTAATTCCTATTGATCA+TGG | 0.442901 | 5.1:-36017304 | MS.gene62152:CDS |
| GTAAGAGAACTCTCTTCAAC+AGG | 0.443142 | 5.1:+36018081 | None:intergenic |
| TGCTAACAAGTCTCTTTCTC+CGG | 0.444378 | 5.1:+36017515 | None:intergenic |
| GGGGTTGAAACGATCTGTTC+GGG | 0.447342 | 5.1:-36017674 | MS.gene62152:CDS |
| GATGTAAAGTAGCCATTATC+CGG | 0.447873 | 5.1:+36016611 | None:intergenic |
| AATGTCAATGATGAGGTCAA+TGG | 0.447940 | 5.1:-36017547 | MS.gene62152:CDS |
| GCACACAACCCTTATCGGTT+TGG | 0.448229 | 5.1:+36018175 | None:intergenic |
| CTGCCTCTGCTTCTGTCCTA+AGG | 0.450532 | 5.1:+36016442 | None:intergenic |
| ATTGTGAAGGCGATTAAGAT+GGG | 0.451455 | 5.1:-36017850 | MS.gene62152:CDS |
| AGAAAAGTTGGTGATGGCAT+TGG | 0.451482 | 5.1:-36017343 | MS.gene62152:CDS |
| GCTCTGTCTGCCAGAAACTT+TGG | 0.451851 | 5.1:-36017281 | MS.gene62152:CDS |
| AAGGAGGATGTTGGCAGAGA+GGG | 0.455917 | 5.1:-36016969 | MS.gene62152:CDS |
| AAGAGGAAATTTATAACCTT+AGG | 0.457271 | 5.1:-36016458 | MS.gene62152:CDS |
| GAAACACTCTGGAGGAAAAC+CGG | 0.459546 | 5.1:-36016630 | MS.gene62152:CDS |
| CGTGTTCGTCCAAACCGATA+AGG | 0.461183 | 5.1:-36018184 | MS.gene62152:CDS |
| TTAGGGTTATTAGGCGCAAA+AGG | 0.466929 | 5.1:+36017727 | None:intergenic |
| TCGTCTCCCACCTCAGTCCT+TGG | 0.470819 | 5.1:+36016935 | None:intergenic |
| TGGTAAAGCTCTTGGACAGC+CGG | 0.473910 | 5.1:-36017695 | MS.gene62152:CDS |
| CTCCTTGTTTGTCCCCAACT+GGG | 0.474424 | 5.1:-36017963 | MS.gene62152:CDS |
| ATGTCAATGATGAGGTCAAT+GGG | 0.475286 | 5.1:-36017546 | MS.gene62152:CDS |
| TTCAGTGATACAGTAATCTC+CGG | 0.475464 | 5.1:+36016680 | None:intergenic |
| GGTAAAGCTCTTGGACAGCC+GGG | 0.482186 | 5.1:-36017694 | MS.gene62152:CDS |
| TCTGTTCGGGTTGGAGAGAC+GGG | 0.484443 | 5.1:-36017661 | MS.gene62152:CDS |
| TAAGGTTATAAATTTCCTCT+TGG | 0.486073 | 5.1:+36016460 | None:intergenic |
| GTGTTCGTCCAAACCGATAA+GGG | 0.486721 | 5.1:-36018183 | MS.gene62152:CDS |
| ACAATGTACATACTGTTAAG+AGG | 0.489555 | 5.1:-36018128 | MS.gene62152:CDS |
| TATTGTGAAGGCGATTAAGA+TGG | 0.490069 | 5.1:-36017851 | MS.gene62152:CDS |
| AATTTCCTCTTGGCGAATGC+CGG | 0.490852 | 5.1:+36016470 | None:intergenic |
| CAAAGCCAGAGGCAACCTGC+TGG | 0.492330 | 5.1:-36018216 | MS.gene62152:CDS |
| ATCTGTTCGGGTTGGAGAGA+CGG | 0.492848 | 5.1:-36017662 | MS.gene62152:CDS |
| GATTAAGATGGGGATCGATC+CGG | 0.496887 | 5.1:-36017839 | MS.gene62152:CDS |
| AAGTGATGAGGAGTCCTCTT+GGG | 0.497100 | 5.1:-36018269 | MS.gene62152:CDS |
| CAAACAACCTCAAGTTCACT+TGG | 0.500036 | 5.1:+36017001 | None:intergenic |
| TAATGTGCCTCCTACTGCCT+TGG | 0.500216 | 5.1:-36017593 | MS.gene62152:CDS |
| CTCTTGGGAGGGAGTATCAT+GGG | 0.505591 | 5.1:-36018254 | MS.gene62152:CDS |
| GAAGTGATGAGGAGTCCTCT+TGG | 0.506034 | 5.1:-36018270 | MS.gene62152:CDS |
| TTTGCGCCTAATAACCCTAA+AGG | 0.512201 | 5.1:-36017724 | MS.gene62152:CDS |
| AGAGGCTTGTCTCAGAGTGC+TGG | 0.512571 | 5.1:-36017125 | MS.gene62152:CDS |
| TTGTTTGTCCCCAACTGGGA+GGG | 0.513060 | 5.1:-36017959 | MS.gene62152:CDS |
| AGGTTGTTTGTTTAGAGGCA+AGG | 0.513545 | 5.1:-36016988 | MS.gene62152:CDS |
| ATCAGATTCCACTCCAAAGA+TGG | 0.519649 | 5.1:-36016876 | MS.gene62152:CDS |
| CTGGATATCCCTCCCAGTTG+GGG | 0.519889 | 5.1:+36017951 | None:intergenic |
| CCTCTTGGGAGGGAGTATCA+TGG | 0.525248 | 5.1:-36018255 | MS.gene62152:CDS |
| AAACTCCTCGTCAACAAAAG+AGG | 0.525865 | 5.1:+36018006 | None:intergenic |
| CACTCCAAAGATGGCAATGG+AGG | 0.526430 | 5.1:-36016867 | MS.gene62152:CDS |
| TTAGTTAGAAAAGTTGGTGA+TGG | 0.527730 | 5.1:-36017349 | MS.gene62152:CDS |
| ATCCGGTTCCTGTTAATGGT+GGG | 0.527973 | 5.1:-36017822 | MS.gene62152:CDS |
| TAGGACAGAAGCAGAGGCAG+AGG | 0.528179 | 5.1:-36016439 | MS.gene62152:CDS |
| CTCCATTGCCATCTTTGGAG+TGG | 0.530180 | 5.1:+36016868 | None:intergenic |
| GCAAGCTCCTCATCAGAAAA+CGG | 0.531273 | 5.1:+36017214 | None:intergenic |
| AAGTGATGAAGAATCTCCTC+AGG | 0.533439 | 5.1:-36016744 | MS.gene62152:CDS |
| GCCTCCTACTGCCTTGGTGA+AGG | 0.534134 | 5.1:-36017587 | MS.gene62152:CDS |
| TTGGCATGGAATTGGATCGC+GGG | 0.534252 | 5.1:-36018152 | MS.gene62152:CDS |
| CTGTCTGCCAGAAACTTTGG+AGG | 0.540526 | 5.1:-36017278 | MS.gene62152:CDS |
| CTCTCATCCAATTTGGAGAG+TGG | 0.540685 | 5.1:+36016788 | None:intergenic |
| AGGGTCTAGATCACGAATGT+AGG | 0.542891 | 5.1:+36017192 | None:intergenic |
| AACACGCGTCTCCTCCCAGC+AGG | 0.547617 | 5.1:+36018201 | None:intergenic |
| CAGAAGCAGAGGCAGAGGCT+TGG | 0.547858 | 5.1:-36016434 | MS.gene62152:CDS |
| CCATAAGTTTCATCACATCA+AGG | 0.549621 | 5.1:+36017881 | None:intergenic |
| GAGCATTGAGGAGGAAGAGG+AGG | 0.550253 | 5.1:-36016768 | MS.gene62152:CDS |
| TTGAAACGATCTGTTCGGGT+TGG | 0.551827 | 5.1:-36017670 | MS.gene62152:CDS |
| TGGGAGGGATATCCAGCAAA+GGG | 0.553902 | 5.1:-36017944 | MS.gene62152:CDS |
| TTTAGAGGCAAGGAGGATGT+TGG | 0.562538 | 5.1:-36016978 | MS.gene62152:CDS |
| AGCTAATTCCTATTGATCAT+GGG | 0.562986 | 5.1:-36017303 | MS.gene62152:CDS |
| GAGGATGTTGGCAGAGAGGG+AGG | 0.564413 | 5.1:-36016966 | MS.gene62152:CDS |
| TCTCATCCAATTTGGAGAGT+GGG | 0.566781 | 5.1:+36016789 | None:intergenic |
| GATCCGGTTCCTGTTAATGG+TGG | 0.572205 | 5.1:-36017823 | MS.gene62152:CDS |
| CTTAACACAGATAGACATGC+TGG | 0.572709 | 5.1:-36017379 | MS.gene62152:CDS |
| TGACTGCGAGATGCTTCGAA+TGG | 0.574020 | 5.1:-36017164 | MS.gene62152:CDS |
| CTCCCAGTTGGGGACAAACA+AGG | 0.576176 | 5.1:+36017961 | None:intergenic |
| AAAGCCAGAGGCAACCTGCT+GGG | 0.577393 | 5.1:-36018215 | MS.gene62152:CDS |
| CTTGTTTGTCCCCAACTGGG+AGG | 0.579667 | 5.1:-36017960 | MS.gene62152:CDS |
| GATATTGATTGCGATGAAGG+TGG | 0.583383 | 5.1:-36016899 | MS.gene62152:CDS |
| ACTTTACATCATCTGGCCAT+AGG | 0.586682 | 5.1:-36016598 | MS.gene62152:CDS |
| TGGCATGGAATTGGATCGCG+GGG | 0.587761 | 5.1:-36018151 | MS.gene62152:CDS |
| AATCATTTCGAACAGCACTA+AGG | 0.588924 | 5.1:+36018031 | None:intergenic |
| TTGTTTGTTTAGAGGCAAGG+AGG | 0.592570 | 5.1:-36016985 | MS.gene62152:CDS |
| TTCCACTCCAAAGATGGCAA+TGG | 0.594282 | 5.1:-36016870 | MS.gene62152:CDS |
| GCAAAAGGCTCTTCATCGGT+CGG | 0.596026 | 5.1:+36017742 | None:intergenic |
| TAACCTTAGGACAGAAGCAG+AGG | 0.596926 | 5.1:-36016445 | MS.gene62152:CDS |
| ACTATCTCCAAGGACTGAGG+TGG | 0.597749 | 5.1:-36016942 | MS.gene62152:CDS |
| CTTGGCATGGAATTGGATCG+CGG | 0.599942 | 5.1:-36018153 | MS.gene62152:CDS |
| TGATGAGGAGTCCTCTTGGG+AGG | 0.600340 | 5.1:-36018266 | MS.gene62152:CDS |
| TGTGATGAAACTTATGGCTA+AGG | 0.600996 | 5.1:-36017875 | MS.gene62152:CDS |
| GTAAAGCTCTTGGACAGCCG+GGG | 0.601192 | 5.1:-36017693 | MS.gene62152:CDS |
| ACCTTCACCAAGGCAGTAGG+AGG | 0.604659 | 5.1:+36017586 | None:intergenic |
| TCGCGAGTTCTACAGGGGTG+AGG | 0.606075 | 5.1:-36017029 | MS.gene62152:CDS |
| TAAGGGTTGTGTGCTTGGCA+TGG | 0.606790 | 5.1:-36018166 | MS.gene62152:CDS |
| TACGATGCACCGAAGCAACC+GGG | 0.606809 | 5.1:+36017425 | None:intergenic |
| CAAGGAGGATGTTGGCAGAG+AGG | 0.607328 | 5.1:-36016970 | MS.gene62152:CDS |
| TTTCATCACATCAAGGCGTG+TGG | 0.611713 | 5.1:+36017888 | None:intergenic |
| CGAGTTCTACAGGGGTGAGG+AGG | 0.612188 | 5.1:-36017026 | MS.gene62152:CDS |
| AAATAATGTCCAATCATCCT+CGG | 0.612833 | 5.1:+36016520 | None:intergenic |
| CAAATTGGATGAGAGCATTG+AGG | 0.615364 | 5.1:-36016780 | MS.gene62152:CDS |
| AGGCGCAAAAGGCTCTTCAT+CGG | 0.616207 | 5.1:+36017738 | None:intergenic |
| GATGACTCGCGAGTTCTACA+GGG | 0.618979 | 5.1:-36017035 | MS.gene62152:CDS |
| GATCTTCAATGTCAATGATG+AGG | 0.619613 | 5.1:-36017554 | MS.gene62152:CDS |
| GGAGGAGCCAAGTGAACTTG+AGG | 0.621206 | 5.1:-36017008 | MS.gene62152:CDS |
| CTATCTCCAAGGACTGAGGT+GGG | 0.621633 | 5.1:-36016941 | MS.gene62152:CDS |
| CTGGGAGGGATATCCAGCAA+AGG | 0.625870 | 5.1:-36017945 | MS.gene62152:CDS |
| GATGAGGAGTCCTCTTGGGA+GGG | 0.628291 | 5.1:-36018265 | MS.gene62152:CDS |
| AGATGGCAGTTGAAGTGATG+AGG | 0.628913 | 5.1:-36018281 | MS.gene62152:CDS |
| TATGGCTAAGGATATTGTGA+AGG | 0.638957 | 5.1:-36017863 | MS.gene62152:CDS |
| CCATGATACTCCCTCCCAAG+AGG | 0.644125 | 5.1:+36018255 | None:intergenic |
| GAAAACGGAATCGAAGCTTG+AGG | 0.644682 | 5.1:+36017229 | None:intergenic |
| AGAGTCAGAATCAAAGCCAG+AGG | 0.650036 | 5.1:-36018227 | MS.gene62152:CDS |
| GGAGCTGCCAATGATTCGAG+AGG | 0.651572 | 5.1:-36017143 | MS.gene62152:CDS |
| TGTATCCGGCATTCGCCAAG+AGG | 0.652283 | 5.1:-36016475 | MS.gene62152:CDS |
| GTAACCTTCACCAAGGCAGT+AGG | 0.654890 | 5.1:+36017583 | None:intergenic |
| CGAACAGATCGTTTCAACCC+CGG | 0.656066 | 5.1:+36017676 | None:intergenic |
| GAGTCCAGTTCAGACCCAGA+TGG | 0.657322 | 5.1:-36018298 | MS.gene62152:CDS |
| GCATCTCGCAGTCATGAGCA+GGG | 0.668786 | 5.1:+36017173 | None:intergenic |
| AGAGGGAGGAACTATCTCCA+AGG | 0.671920 | 5.1:-36016952 | MS.gene62152:CDS |
| GTGGTCCTATTGAAATATTG+GGG | 0.672980 | 5.1:-36017915 | MS.gene62152:CDS |
| ATTGGATGAGAGCATTGAGG+AGG | 0.673893 | 5.1:-36016777 | MS.gene62152:CDS |
| TTGTGAAGGCGATTAAGATG+GGG | 0.677942 | 5.1:-36017849 | MS.gene62152:CDS |
| GGAACTATCTCCAAGGACTG+AGG | 0.679298 | 5.1:-36016945 | MS.gene62152:CDS |
| GCCAGAGGCAACCTGCTGGG+AGG | 0.686395 | 5.1:-36018212 | MS.gene62152:CDS |
| ATGTACATACTGTTAAGAGG+AGG | 0.703896 | 5.1:-36018125 | MS.gene62152:CDS |
| ATCCAGCAAAGGGATAAGAG+TGG | 0.705880 | 5.1:-36017934 | MS.gene62152:CDS |
| CGAGTGAGTAACCTTCACCA+AGG | 0.723759 | 5.1:+36017576 | None:intergenic |
| ATGACTCGCGAGTTCTACAG+GGG | 0.724018 | 5.1:-36017034 | MS.gene62152:CDS |
| AATGCTTGCAGATATGACCG+AGG | 0.747799 | 5.1:-36016537 | MS.gene62152:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATTTTAGGGATTGTAAT+GGG | - | chr5.1:36016944-36016963 | MS.gene62152:CDS | 20.0% |
| !!! | TATTATTTTAGGGATTGTAA+TGG | - | chr5.1:36016943-36016962 | MS.gene62152:CDS | 20.0% |
| ! | AAGAGGAAATTTATAACCTT+AGG | - | chr5.1:36018272-36018291 | MS.gene62152:CDS | 25.0% |
| ! | GTATAGGGATATTAGATATT+AGG | - | chr5.1:36017325-36017344 | MS.gene62152:CDS | 25.0% |
| ! | TAAGGTTATAAATTTCCTCT+TGG | + | chr5.1:36018273-36018292 | None:intergenic | 25.0% |
| ! | TGAAAAGTTTCTCTGATTAA+AGG | + | chr5.1:36017891-36017910 | None:intergenic | 25.0% |
| !!! | AACTTGTTAGTTAGAAAAGT+TGG | - | chr5.1:36017375-36017394 | MS.gene62152:CDS | 25.0% |
| !!! | AATAGTTGCAACTTTTTCTT+GGG | + | chr5.1:36018030-36018049 | None:intergenic | 25.0% |
| !!! | TTATTTTAGGGATTGTAATG+GGG | - | chr5.1:36016945-36016964 | MS.gene62152:CDS | 25.0% |
| AAATAATGTCCAATCATCCT+CGG | + | chr5.1:36018213-36018232 | None:intergenic | 30.0% | |
| ACAATGTACATACTGTTAAG+AGG | - | chr5.1:36016602-36016621 | MS.gene62152:CDS | 30.0% | |
| AGAAAAAGTTGCAACTATTC+CGG | - | chr5.1:36018031-36018050 | MS.gene62152:CDS | 30.0% | |
| AGCTAATTCCTATTGATCAT+GGG | - | chr5.1:36017427-36017446 | MS.gene62152:CDS | 30.0% | |
| AGTGGTCCTATTGAAATATT+GGG | - | chr5.1:36016814-36016833 | MS.gene62152:CDS | 30.0% | |
| CAATGAATCCACTCAAAATA+AGG | + | chr5.1:36017480-36017499 | None:intergenic | 30.0% | |
| CTTTACCAACAAAACCTTTA+GGG | + | chr5.1:36017023-36017042 | None:intergenic | 30.0% | |
| ! | TTTGATATTGATTGCGATGA+AGG | - | chr5.1:36017828-36017847 | MS.gene62152:CDS | 30.0% |
| !! | AATAACCCTAAAGGTTTTGT+TGG | - | chr5.1:36017015-36017034 | MS.gene62152:CDS | 30.0% |
| !! | ACAAAACCTTTAGGGTTATT+AGG | + | chr5.1:36017015-36017034 | None:intergenic | 30.0% |
| !! | GAATAGTTGCAACTTTTTCT+TGG | + | chr5.1:36018031-36018050 | None:intergenic | 30.0% |
| !! | TTAGTTAGAAAAGTTGGTGA+TGG | - | chr5.1:36017381-36017400 | MS.gene62152:CDS | 30.0% |
| !! | TTCTCTTACTTTTGGTGATA+TGG | - | chr5.1:36016663-36016682 | MS.gene62152:CDS | 30.0% |
| !!! | CTTATTTTGAGTGGATTCAT+TGG | - | chr5.1:36017478-36017497 | MS.gene62152:CDS | 30.0% |
| AATCATTTCGAACAGCACTA+AGG | + | chr5.1:36016702-36016721 | None:intergenic | 35.0% | |
| AATGTCAATGATGAGGTCAA+TGG | - | chr5.1:36017183-36017202 | MS.gene62152:CDS | 35.0% | |
| ACTTGAGGTTGTTTGTTTAG+AGG | - | chr5.1:36017737-36017756 | MS.gene62152:CDS | 35.0% | |
| ATGTACATACTGTTAAGAGG+AGG | - | chr5.1:36016605-36016624 | MS.gene62152:CDS | 35.0% | |
| ATGTCAATGATGAGGTCAAT+GGG | - | chr5.1:36017184-36017203 | MS.gene62152:CDS | 35.0% | |
| ATTGTGAAGGCGATTAAGAT+GGG | - | chr5.1:36016880-36016899 | MS.gene62152:CDS | 35.0% | |
| CCATAAGTTTCATCACATCA+AGG | + | chr5.1:36016852-36016871 | None:intergenic | 35.0% | |
| CCTTGATGTGATGAAACTTA+TGG | - | chr5.1:36016849-36016868 | MS.gene62152:CDS | 35.0% | |
| GAGCTAATTCCTATTGATCA+TGG | - | chr5.1:36017426-36017445 | MS.gene62152:CDS | 35.0% | |
| GAGTGGTCCTATTGAAATAT+TGG | - | chr5.1:36016813-36016832 | MS.gene62152:CDS | 35.0% | |
| GATCTTCAATGTCAATGATG+AGG | - | chr5.1:36017176-36017195 | MS.gene62152:CDS | 35.0% | |
| GATGTAAAGTAGCCATTATC+CGG | + | chr5.1:36018122-36018141 | None:intergenic | 35.0% | |
| GATTGCCCCAATATTTCAAT+AGG | + | chr5.1:36016823-36016842 | None:intergenic | 35.0% | |
| GCTTTACCAACAAAACCTTT+AGG | + | chr5.1:36017024-36017043 | None:intergenic | 35.0% | |
| GGATGATTGGACATTATTTC+TGG | - | chr5.1:36018214-36018233 | MS.gene62152:CDS | 35.0% | |
| GTGGTCCTATTGAAATATTG+GGG | - | chr5.1:36016815-36016834 | MS.gene62152:CDS | 35.0% | |
| TATGGCTAAGGATATTGTGA+AGG | - | chr5.1:36016867-36016886 | MS.gene62152:CDS | 35.0% | |
| TATTGTGAAGGCGATTAAGA+TGG | - | chr5.1:36016879-36016898 | MS.gene62152:CDS | 35.0% | |
| TGTGATGAAACTTATGGCTA+AGG | - | chr5.1:36016855-36016874 | MS.gene62152:CDS | 35.0% | |
| TTCAGTGATACAGTAATCTC+CGG | + | chr5.1:36018053-36018072 | None:intergenic | 35.0% | |
| ! | AATGGCTACTTTACATCATC+TGG | - | chr5.1:36018125-36018144 | MS.gene62152:CDS | 35.0% |
| ! | GAAGAGAGTTCTCTTACTTT+TGG | - | chr5.1:36016655-36016674 | MS.gene62152:CDS | 35.0% |
| !! | GATTTTGATGCTAGTGATCA+TGG | - | chr5.1:36017270-36017289 | MS.gene62152:CDS | 35.0% |
| !! | TGGAGGTGCGTATTATTTTA+GGG | - | chr5.1:36016933-36016952 | MS.gene62152:CDS | 35.0% |
| !! | TTGGAGGTGCGTATTATTTT+AGG | - | chr5.1:36016932-36016951 | MS.gene62152:CDS | 35.0% |
| !!! | AGAGTGTTTCTGCTTTTTCT+CGG | + | chr5.1:36018090-36018109 | None:intergenic | 35.0% |
| AAAAAGCAGAAACACTCTGG+AGG | - | chr5.1:36018092-36018111 | MS.gene62152:CDS | 40.0% | |
| AAACTCCTCGTCAACAAAAG+AGG | + | chr5.1:36016727-36016746 | None:intergenic | 40.0% | |
| AAGTGATGAAGAATCTCCTC+AGG | - | chr5.1:36017986-36018005 | MS.gene62152:CDS | 40.0% | |
| ACTTTACATCATCTGGCCAT+AGG | - | chr5.1:36018132-36018151 | MS.gene62152:CDS | 40.0% | |
| AGGTCAATGGGAATTGTTTC+CGG | - | chr5.1:36017196-36017215 | MS.gene62152:CDS | 40.0% | |
| AGGTTGTTTGTTTAGAGGCA+AGG | - | chr5.1:36017742-36017761 | MS.gene62152:CDS | 40.0% | |
| ATCAGATTCCACTCCAAAGA+TGG | - | chr5.1:36017854-36017873 | MS.gene62152:CDS | 40.0% | |
| ATTACGAAGCTTATGCTTGC+AGG | + | chr5.1:36018176-36018195 | None:intergenic | 40.0% | |
| CAAACAACCTCAAGTTCACT+TGG | + | chr5.1:36017732-36017751 | None:intergenic | 40.0% | |
| CTCAATGCTCTCATCCAATT+TGG | + | chr5.1:36017952-36017971 | None:intergenic | 40.0% | |
| CTTAACACAGATAGACATGC+TGG | - | chr5.1:36017351-36017370 | MS.gene62152:CDS | 40.0% | |
| GAAGAATCTCCTCAGGAATT+TGG | - | chr5.1:36017993-36018012 | MS.gene62152:CDS | 40.0% | |
| GAGAAAAAGCAGAAACACTC+TGG | - | chr5.1:36018089-36018108 | MS.gene62152:CDS | 40.0% | |
| GGTCTTTGTCTTGCTGAAAT+TGG | - | chr5.1:36017666-36017685 | MS.gene62152:CDS | 40.0% | |
| GTAAGAGAACTCTCTTCAAC+AGG | + | chr5.1:36016652-36016671 | None:intergenic | 40.0% | |
| GTTTCAAGAGTTGCTGTATC+CGG | - | chr5.1:36018241-36018260 | MS.gene62152:CDS | 40.0% | |
| TAAGGATCCTCCAAAGTTTC+TGG | + | chr5.1:36017462-36017481 | None:intergenic | 40.0% | |
| TCTCATCCAATTTGGAGAGT+GGG | + | chr5.1:36017944-36017963 | None:intergenic | 40.0% | |
| TGCTAACAAGTCTCTTTCTC+CGG | + | chr5.1:36017218-36017237 | None:intergenic | 40.0% | |
| TTAGGGTTATTAGGCGCAAA+AGG | + | chr5.1:36017006-36017025 | None:intergenic | 40.0% | |
| TTCAGCATGCACTTGGAAAT+GGG | - | chr5.1:36017907-36017926 | MS.gene62152:CDS | 40.0% | |
| TTGTGAAGGCGATTAAGATG+GGG | - | chr5.1:36016881-36016900 | MS.gene62152:CDS | 40.0% | |
| TTGTTTGTTTAGAGGCAAGG+AGG | - | chr5.1:36017745-36017764 | MS.gene62152:CDS | 40.0% | |
| TTTCAGCATGCACTTGGAAA+TGG | - | chr5.1:36017906-36017925 | MS.gene62152:CDS | 40.0% | |
| TTTGCGCCTAATAACCCTAA+AGG | - | chr5.1:36017006-36017025 | MS.gene62152:CDS | 40.0% | |
| ! | AGCAGCCTCTTTGAGAAAAA+TGG | + | chr5.1:36017640-36017659 | None:intergenic | 40.0% |
| ! | GAAACTTTTCAGCATGCACT+TGG | - | chr5.1:36017900-36017919 | MS.gene62152:CDS | 40.0% |
| ! | GATATTGATTGCGATGAAGG+TGG | - | chr5.1:36017831-36017850 | MS.gene62152:CDS | 40.0% |
| ! | TTCGATTCCGTTTTCTGATG+AGG | - | chr5.1:36017509-36017528 | MS.gene62152:CDS | 40.0% |
| !! | AGAAAAGTTGGTGATGGCAT+TGG | - | chr5.1:36017387-36017406 | MS.gene62152:CDS | 40.0% |
| !! | ATGGCATTGGAACTTTTGGT+CGG | - | chr5.1:36017400-36017419 | MS.gene62152:CDS | 40.0% |
| !! | CAAATTGGATGAGAGCATTG+AGG | - | chr5.1:36017950-36017969 | MS.gene62152:CDS | 40.0% |
| !! | CTGCACCATTTTTCTCAAAG+AGG | - | chr5.1:36017632-36017651 | MS.gene62152:CDS | 40.0% |
| !! | GAAAAAGCACCAAATTCCTG+AGG | + | chr5.1:36018005-36018024 | None:intergenic | 40.0% |
| !!! | GGTTTTGTTGGTAAAGCTCT+TGG | - | chr5.1:36017027-36017046 | MS.gene62152:CDS | 40.0% |
| !!! | TGGAGGATCCTTATTTTGAG+TGG | - | chr5.1:36017469-36017488 | MS.gene62152:CDS | 40.0% |
| AAGTGATGAGGAGTCCTCTT+GGG | - | chr5.1:36016461-36016480 | MS.gene62152:CDS | 45.0% | |
| AATGCTTGCAGATATGACCG+AGG | - | chr5.1:36018193-36018212 | MS.gene62152:CDS | 45.0% | |
| AATTTCCTCTTGGCGAATGC+CGG | + | chr5.1:36018263-36018282 | None:intergenic | 45.0% | |
| AGACAAGCCTCTCGAATCAT+TGG | + | chr5.1:36017597-36017616 | None:intergenic | 45.0% | |
| AGACAGAGCCCATGATCAAT+AGG | + | chr5.1:36017438-36017457 | None:intergenic | 45.0% | |
| AGAGTCAGAATCAAAGCCAG+AGG | - | chr5.1:36016503-36016522 | MS.gene62152:CDS | 45.0% | |
| AGATGGCAGTTGAAGTGATG+AGG | - | chr5.1:36016449-36016468 | MS.gene62152:CDS | 45.0% | |
| AGGGTCTAGATCACGAATGT+AGG | + | chr5.1:36017541-36017560 | None:intergenic | 45.0% | |
| ATCCAGCAAAGGGATAAGAG+TGG | - | chr5.1:36016796-36016815 | MS.gene62152:CDS | 45.0% | |
| ATCCGGTTCCTGTTAATGGT+GGG | - | chr5.1:36016908-36016927 | MS.gene62152:CDS | 45.0% | |
| ATCGATCCGGTTCCTGTTAA+TGG | - | chr5.1:36016904-36016923 | MS.gene62152:CDS | 45.0% | |
| CAGATATGACCGAGGATGAT+TGG | - | chr5.1:36018201-36018220 | MS.gene62152:CDS | 45.0% | |
| CATCACTTCAACTGCCATCT+GGG | + | chr5.1:36016449-36016468 | None:intergenic | 45.0% | |
| CTCAAAGAGGCTGCTGAATT+TGG | - | chr5.1:36017645-36017664 | MS.gene62152:CDS | 45.0% | |
| CTCTCATCCAATTTGGAGAG+TGG | + | chr5.1:36017945-36017964 | None:intergenic | 45.0% | |
| GAAAACGGAATCGAAGCTTG+AGG | + | chr5.1:36017504-36017523 | None:intergenic | 45.0% | |
| GATTAAGATGGGGATCGATC+CGG | - | chr5.1:36016891-36016910 | MS.gene62152:CDS | 45.0% | |
| GCAAGCTCCTCATCAGAAAA+CGG | + | chr5.1:36017519-36017538 | None:intergenic | 45.0% | |
| GTGTTCGTCCAAACCGATAA+GGG | - | chr5.1:36016547-36016566 | MS.gene62152:CDS | 45.0% | |
| TAACCTTAGGACAGAAGCAG+AGG | - | chr5.1:36018285-36018304 | MS.gene62152:CDS | 45.0% | |
| TCATCACTTCAACTGCCATC+TGG | + | chr5.1:36016450-36016469 | None:intergenic | 45.0% | |
| TCTGGAGGAAAACCGGATAA+TGG | - | chr5.1:36018107-36018126 | MS.gene62152:CDS | 45.0% | |
| TTCCACTCCAAAGATGGCAA+TGG | - | chr5.1:36017860-36017879 | MS.gene62152:CDS | 45.0% | |
| TTGAAACGATCTGTTCGGGT+TGG | - | chr5.1:36017060-36017079 | MS.gene62152:CDS | 45.0% | |
| TTGTGTGCTTGGCATGGAAT+TGG | - | chr5.1:36016570-36016589 | MS.gene62152:CDS | 45.0% | |
| TTTAGAGGCAAGGAGGATGT+TGG | - | chr5.1:36017752-36017771 | MS.gene62152:CDS | 45.0% | |
| TTTCATCACATCAAGGCGTG+TGG | + | chr5.1:36016845-36016864 | None:intergenic | 45.0% | |
| ! | ATTCGCCTCTTTTGTTGACG+AGG | - | chr5.1:36016719-36016738 | MS.gene62152:CDS | 45.0% |
| ! | GAAACACTCTGGAGGAAAAC+CGG | - | chr5.1:36018100-36018119 | MS.gene62152:CDS | 45.0% |
| ! | TTGCTTCGGTGCATCGTATA+GGG | - | chr5.1:36017310-36017329 | MS.gene62152:CDS | 45.0% |
| !! | ATTGGATGAGAGCATTGAGG+AGG | - | chr5.1:36017953-36017972 | MS.gene62152:CDS | 45.0% |
| !! | GGTGATGGCATTGGAACTTT+TGG | - | chr5.1:36017396-36017415 | MS.gene62152:CDS | 45.0% |
| !! | TGGCATTGGAACTTTTGGTC+GGG | - | chr5.1:36017401-36017420 | MS.gene62152:CDS | 45.0% |
| !!! | CTGCTTTTTCTCGGCTAACA+TGG | + | chr5.1:36018081-36018100 | None:intergenic | 45.0% |
| AAGGAGGATGTTGGCAGAGA+GGG | - | chr5.1:36017761-36017780 | MS.gene62152:CDS | 50.0% | |
| ACCGATAAGGGTTGTGTGCT+TGG | - | chr5.1:36016559-36016578 | MS.gene62152:CDS | 50.0% | |
| ACTATCTCCAAGGACTGAGG+TGG | - | chr5.1:36017788-36017807 | MS.gene62152:CDS | 50.0% | |
| AGAGGGAGGAACTATCTCCA+AGG | - | chr5.1:36017778-36017797 | MS.gene62152:CDS | 50.0% | |
| AGCCCACCATTAACAGGAAC+CGG | + | chr5.1:36016913-36016932 | None:intergenic | 50.0% | |
| AGGCGCAAAAGGCTCTTCAT+CGG | + | chr5.1:36016995-36017014 | None:intergenic | 50.0% | |
| ATACGATGCACCGAAGCAAC+CGG | + | chr5.1:36017309-36017328 | None:intergenic | 50.0% | |
| ATGACTCGCGAGTTCTACAG+GGG | - | chr5.1:36017696-36017715 | MS.gene62152:CDS | 50.0% | |
| CACTCCAAAGATGGCAATGG+AGG | - | chr5.1:36017863-36017882 | MS.gene62152:CDS | 50.0% | |
| CGAACAGATCGTTTCAACCC+CGG | + | chr5.1:36017057-36017076 | None:intergenic | 50.0% | |
| CGAGTGAGTAACCTTCACCA+AGG | + | chr5.1:36017157-36017176 | None:intergenic | 50.0% | |
| CGGGGTTGAAACGATCTGTT+CGG | - | chr5.1:36017055-36017074 | MS.gene62152:CDS | 50.0% | |
| CGTGTTCGTCCAAACCGATA+AGG | - | chr5.1:36016546-36016565 | MS.gene62152:CDS | 50.0% | |
| CTATCTCCAAGGACTGAGGT+GGG | - | chr5.1:36017789-36017808 | MS.gene62152:CDS | 50.0% | |
| CTGTCTGCCAGAAACTTTGG+AGG | - | chr5.1:36017452-36017471 | MS.gene62152:CDS | 50.0% | |
| CTTGGCATGGAATTGGATCG+CGG | - | chr5.1:36016577-36016596 | MS.gene62152:CDS | 50.0% | |
| GAAGTGATGAGGAGTCCTCT+TGG | - | chr5.1:36016460-36016479 | MS.gene62152:CDS | 50.0% | |
| GACCACTCTTATCCCTTTGC+TGG | + | chr5.1:36016801-36016820 | None:intergenic | 50.0% | |
| GATCCGGTTCCTGTTAATGG+TGG | - | chr5.1:36016907-36016926 | MS.gene62152:CDS | 50.0% | |
| GATGACTCGCGAGTTCTACA+GGG | - | chr5.1:36017695-36017714 | MS.gene62152:CDS | 50.0% | |
| GCAAAAGGCTCTTCATCGGT+CGG | + | chr5.1:36016991-36017010 | None:intergenic | 50.0% | |
| GCCAAGCACACAACCCTTAT+CGG | + | chr5.1:36016563-36016582 | None:intergenic | 50.0% | |
| GCTCTGTCTGCCAGAAACTT+TGG | - | chr5.1:36017449-36017468 | MS.gene62152:CDS | 50.0% | |
| GGAACTATCTCCAAGGACTG+AGG | - | chr5.1:36017785-36017804 | MS.gene62152:CDS | 50.0% | |
| GGATCCTCCATTGCCATCTT+TGG | + | chr5.1:36017870-36017889 | None:intergenic | 50.0% | |
| GGGGTTGAAACGATCTGTTC+GGG | - | chr5.1:36017056-36017075 | MS.gene62152:CDS | 50.0% | |
| GTAACCTTCACCAAGGCAGT+AGG | + | chr5.1:36017150-36017169 | None:intergenic | 50.0% | |
| TAAGGGTTGTGTGCTTGGCA+TGG | - | chr5.1:36016564-36016583 | MS.gene62152:CDS | 50.0% | |
| TAATGTGCCTCCTACTGCCT+TGG | - | chr5.1:36017137-36017156 | MS.gene62152:CDS | 50.0% | |
| TGACTGCGAGATGCTTCGAA+TGG | - | chr5.1:36017566-36017585 | MS.gene62152:CDS | 50.0% | |
| TGATGACTCGCGAGTTCTAC+AGG | - | chr5.1:36017694-36017713 | MS.gene62152:CDS | 50.0% | |
| TGGGAGGGATATCCAGCAAA+GGG | - | chr5.1:36016786-36016805 | MS.gene62152:CDS | 50.0% | |
| TGGTAAAGCTCTTGGACAGC+CGG | - | chr5.1:36017035-36017054 | MS.gene62152:CDS | 50.0% | |
| TTGGCATGGAATTGGATCGC+GGG | - | chr5.1:36016578-36016597 | MS.gene62152:CDS | 50.0% | |
| TTGTTTGTCCCCAACTGGGA+GGG | - | chr5.1:36016771-36016790 | MS.gene62152:CDS | 50.0% | |
| ! | ACTCCTTGTTTGTCCCCAAC+TGG | - | chr5.1:36016766-36016785 | MS.gene62152:CDS | 50.0% |
| ! | CATTGGAACTTTTGGTCGGG+TGG | - | chr5.1:36017404-36017423 | MS.gene62152:CDS | 50.0% |
| ! | CTCCATTGCCATCTTTGGAG+TGG | + | chr5.1:36017865-36017884 | None:intergenic | 50.0% |
| ! | CTCCTTGTTTGTCCCCAACT+GGG | - | chr5.1:36016767-36016786 | MS.gene62152:CDS | 50.0% |
| ! | GCACACAACCCTTATCGGTT+TGG | + | chr5.1:36016558-36016577 | None:intergenic | 50.0% |
| ! | GTTGCTTCGGTGCATCGTAT+AGG | - | chr5.1:36017309-36017328 | MS.gene62152:CDS | 50.0% |
| !! | ATCTGTTCGGGTTGGAGAGA+CGG | - | chr5.1:36017068-36017087 | MS.gene62152:CDS | 50.0% |
| !! | CTCTTGGGAGGGAGTATCAT+GGG | - | chr5.1:36016476-36016495 | MS.gene62152:CDS | 50.0% |
| !! | GGTTGGAGAGACGGGTTTTA+GGG | - | chr5.1:36017077-36017096 | MS.gene62152:CDS | 50.0% |
| !! | GTTCCTGTTAATGGTGGGCT+TGG | - | chr5.1:36016913-36016932 | MS.gene62152:CDS | 50.0% |
| !! | TGAGAGCATTGAGGAGGAAG+AGG | - | chr5.1:36017959-36017978 | MS.gene62152:CDS | 50.0% |
| AAAGCCAGAGGCAACCTGCT+GGG | - | chr5.1:36016515-36016534 | MS.gene62152:CDS | 55.0% | |
| ACCTTCACCAAGGCAGTAGG+AGG | + | chr5.1:36017147-36017166 | None:intergenic | 55.0% | |
| ACTGCCATCTGGGTCTGAAC+TGG | + | chr5.1:36016439-36016458 | None:intergenic | 55.0% | |
| AGAGGCTTGTCTCAGAGTGC+TGG | - | chr5.1:36017605-36017624 | MS.gene62152:CDS | 55.0% | |
| AGCATCTCGCAGTCATGAGC+AGG | + | chr5.1:36017561-36017580 | None:intergenic | 55.0% | |
| CAAGGAGGATGTTGGCAGAG+AGG | - | chr5.1:36017760-36017779 | MS.gene62152:CDS | 55.0% | |
| CCATGATACTCCCTCCCAAG+AGG | + | chr5.1:36016478-36016497 | None:intergenic | 55.0% | |
| CCTCCAAGCCCACCATTAAC+AGG | + | chr5.1:36016919-36016938 | None:intergenic | 55.0% | |
| CTCCCAGTTGGGGACAAACA+AGG | + | chr5.1:36016772-36016791 | None:intergenic | 55.0% | |
| CTGCCTCTGCTTCTGTCCTA+AGG | + | chr5.1:36018291-36018310 | None:intergenic | 55.0% | |
| CTGGATATCCCTCCCAGTTG+GGG | + | chr5.1:36016782-36016801 | None:intergenic | 55.0% | |
| CTGGGAGGGATATCCAGCAA+AGG | - | chr5.1:36016785-36016804 | MS.gene62152:CDS | 55.0% | |
| CTTGTTTGTCCCCAACTGGG+AGG | - | chr5.1:36016770-36016789 | MS.gene62152:CDS | 55.0% | |
| GAGTCCAGTTCAGACCCAGA+TGG | - | chr5.1:36016432-36016451 | MS.gene62152:CDS | 55.0% | |
| GATGAGGAGTCCTCTTGGGA+GGG | - | chr5.1:36016465-36016484 | MS.gene62152:CDS | 55.0% | |
| GCATCTCGCAGTCATGAGCA+GGG | + | chr5.1:36017560-36017579 | None:intergenic | 55.0% | |
| GCTGCTCATTGGCACTCCTA+TGG | + | chr5.1:36018151-36018170 | None:intergenic | 55.0% | |
| GCTGGATATCCCTCCCAGTT+GGG | + | chr5.1:36016783-36016802 | None:intergenic | 55.0% | |
| GGAGCTGCCAATGATTCGAG+AGG | - | chr5.1:36017587-36017606 | MS.gene62152:CDS | 55.0% | |
| GGAGGAGCCAAGTGAACTTG+AGG | - | chr5.1:36017722-36017741 | MS.gene62152:CDS | 55.0% | |
| GGAGGTTGCGGCTTATCTTC+TGG | - | chr5.1:36017098-36017117 | MS.gene62152:CDS | 55.0% | |
| GGTAAAGCTCTTGGACAGCC+GGG | - | chr5.1:36017036-36017055 | MS.gene62152:CDS | 55.0% | |
| GTAAAGCTCTTGGACAGCCG+GGG | - | chr5.1:36017037-36017056 | MS.gene62152:CDS | 55.0% | |
| TACGATGCACCGAAGCAACC+GGG | + | chr5.1:36017308-36017327 | None:intergenic | 55.0% | |
| TAGGACAGAAGCAGAGGCAG+AGG | - | chr5.1:36018291-36018310 | MS.gene62152:CDS | 55.0% | |
| TCATGGTACGTCGAGCTTCC+CGG | - | chr5.1:36017287-36017306 | MS.gene62152:CDS | 55.0% | |
| TGATGAGGAGTCCTCTTGGG+AGG | - | chr5.1:36016464-36016483 | MS.gene62152:CDS | 55.0% | |
| TGCTGGATATCCCTCCCAGT+TGG | + | chr5.1:36016784-36016803 | None:intergenic | 55.0% | |
| TGGCATGGAATTGGATCGCG+GGG | - | chr5.1:36016579-36016598 | MS.gene62152:CDS | 55.0% | |
| TGTATCCGGCATTCGCCAAG+AGG | - | chr5.1:36018255-36018274 | MS.gene62152:CDS | 55.0% | |
| !! | CCTCTTGGGAGGGAGTATCA+TGG | - | chr5.1:36016475-36016494 | MS.gene62152:CDS | 55.0% |
| !! | CCTGTTAATGGTGGGCTTGG+AGG | - | chr5.1:36016916-36016935 | MS.gene62152:CDS | 55.0% |
| !! | GAGCATTGAGGAGGAAGAGG+AGG | - | chr5.1:36017962-36017981 | MS.gene62152:CDS | 55.0% |
| !! | GGGTTGGAGAGACGGGTTTT+AGG | - | chr5.1:36017076-36017095 | MS.gene62152:CDS | 55.0% |
| !! | TCTGTTCGGGTTGGAGAGAC+GGG | - | chr5.1:36017069-36017088 | MS.gene62152:CDS | 55.0% |
| !!! | GACGGGTTTTAGGGAGGTTG+CGG | - | chr5.1:36017086-36017105 | MS.gene62152:CDS | 55.0% |
| !!! | TGGAGAGACGGGTTTTAGGG+AGG | - | chr5.1:36017080-36017099 | MS.gene62152:CDS | 55.0% |
| CAAAGCCAGAGGCAACCTGC+TGG | - | chr5.1:36016514-36016533 | MS.gene62152:CDS | 60.0% | |
| CAGAAGCAGAGGCAGAGGCT+TGG | - | chr5.1:36018296-36018315 | MS.gene62152:CDS | 60.0% | |
| CGAGTTCTACAGGGGTGAGG+AGG | - | chr5.1:36017704-36017723 | MS.gene62152:CDS | 60.0% | |
| GAGGATGTTGGCAGAGAGGG+AGG | - | chr5.1:36017764-36017783 | MS.gene62152:CDS | 60.0% | |
| GCCTCCTACTGCCTTGGTGA+AGG | - | chr5.1:36017143-36017162 | MS.gene62152:CDS | 60.0% | |
| GCGCAGCCCACTCTCCAAAT+TGG | - | chr5.1:36017935-36017954 | MS.gene62152:CDS | 60.0% | |
| GCTTGCAGGCAGCTGCTCAT+TGG | + | chr5.1:36018162-36018181 | None:intergenic | 60.0% | |
| GTCGAGCTTCCCGGTTGCTT+CGG | - | chr5.1:36017296-36017315 | MS.gene62152:CDS | 60.0% | |
| TCGCGAGTTCTACAGGGGTG+AGG | - | chr5.1:36017701-36017720 | MS.gene62152:CDS | 60.0% | |
| TCGTCTCCCACCTCAGTCCT+TGG | + | chr5.1:36017798-36017817 | None:intergenic | 60.0% | |
| AACACGCGTCTCCTCCCAGC+AGG | + | chr5.1:36016532-36016551 | None:intergenic | 65.0% | |
| TCCTCCCAGCAGGTTGCCTC+TGG | + | chr5.1:36016522-36016541 | None:intergenic | 65.0% | |
| GCCAGAGGCAACCTGCTGGG+AGG | - | chr5.1:36016518-36016537 | MS.gene62152:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 36016415 | 36018337 | 36016415 | ID=MS.gene62152 |
| chr5.1 | mRNA | 36016415 | 36018337 | 36016415 | ID=MS.gene62152.t1;Parent=MS.gene62152 |
| chr5.1 | exon | 36016415 | 36018337 | 36016415 | ID=MS.gene62152.t1.exon1;Parent=MS.gene62152.t1 |
| chr5.1 | CDS | 36016415 | 36018337 | 36016415 | ID=cds.MS.gene62152.t1;Parent=MS.gene62152.t1 |
| Gene Sequence |
| Protein sequence |
