AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene01192

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene01192.t1 MTR_2g009270 97.628 506 12 0 20 525 36 541 0.0 1014
MS.gene01192.t1 MTR_4g094130 77.470 506 95 4 20 524 47 534 0.0 776
MS.gene01192.t1 MTR_4g094130 85.468 406 58 1 120 524 1 406 0.0 729
MS.gene01192.t1 MTR_2g096330 66.910 411 135 1 97 506 97 507 0.0 575
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene01192.t1 AT5G64300 78.151 476 102 2 33 506 54 529 0.0 768
MS.gene01192.t1 AT2G22450 64.854 478 141 7 9 481 19 474 0.0 598
MS.gene01192.t1 AT5G59750 59.184 490 191 5 22 508 22 505 0.0 578
MS.gene01192.t1 AT5G59750 55.344 524 191 6 22 508 22 539 0.0 562
MS.gene01192.t1 AT5G59750 58.451 426 168 5 22 444 22 441 1.54e-169 487

Find 146 sgRNAs with CRISPR-Local

Find 301 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTATGGTTTGACTGTTTC+TGG 0.114584 2.2:-71213253 MS.gene01192:CDS
TGCCGAATCTATTCTAATTA+AGG 0.215332 2.2:-71216405 MS.gene01192:CDS
AGAGACCAAACGTGTGAAAA+TGG 0.231254 2.2:-71213182 MS.gene01192:CDS
TGTCTAACTGGAGACATATT+TGG 0.294019 2.2:-71213962 MS.gene01192:CDS
CTTGATAATGGCAGCAGAAT+TGG 0.313759 2.2:-71216086 MS.gene01192:CDS
GTGAAAATGGGCCACGTCTA+TGG 0.317133 2.2:-71213169 MS.gene01192:CDS
GCTCCGTGCTTATAACTTAC+AGG 0.341829 2.2:-71213816 MS.gene01192:CDS
GCTGATCTTACCATACTTGC+TGG 0.343338 2.2:-71215305 MS.gene01192:CDS
CAGGGGTGTCAGCTCAAGAT+AGG 0.349843 2.2:-71215457 MS.gene01192:CDS
TCTTACCATACTTGCTGGTT+TGG 0.362027 2.2:-71215300 MS.gene01192:CDS
TGGCTCCAAACCAGCAAGTA+TGG 0.366834 2.2:+71215295 None:intergenic
TACTATAAAAGCCATAGCTT+CGG 0.376535 2.2:+71216057 None:intergenic
CCTGTTGACTCTAGGGAATA+TGG 0.376635 2.2:-71213749 MS.gene01192:CDS
TAGATTGGAGCTTCCTTTGA+TGG 0.378506 2.2:-71215984 MS.gene01192:CDS
CTAATTAAGGAACAGTCTAA+TGG 0.392390 2.2:-71216392 MS.gene01192:CDS
TTCCTTAATTAGAATAGATT+CGG 0.393536 2.2:+71216403 None:intergenic
TCCTTTGATGGTGGACAGTA+AGG 0.396490 2.2:-71215972 MS.gene01192:CDS
TGAAGAAGATCTTGATAGAT+TGG 0.401462 2.2:-71215999 MS.gene01192:CDS
GAAGAATCAAATGTTGTTGC+TGG 0.405283 2.2:-71213106 MS.gene01192:CDS
CAGTCAAACCATAGCCTTTG+AGG 0.405833 2.2:+71213260 None:intergenic
TTTGCCAATGATAATCTCAT+TGG 0.412509 2.2:+71216442 None:intergenic
GGACTACAATGACTATGATT+TGG 0.413404 2.2:-71216324 MS.gene01192:CDS
ATTTGATTCTTCAACAGTAT+TGG 0.413785 2.2:+71213117 None:intergenic
TTTCAGATACTGAGGGATCT+AGG 0.416479 2.2:-71213331 MS.gene01192:intron
CTCTAAGTATCTCTTGTTCT+CGG 0.416752 2.2:+71213201 None:intergenic
GTACACTCAGAGTGTCTAAC+TGG 0.418207 2.2:-71213974 MS.gene01192:CDS
TGAGCATATTGCAATGGTTA+AGG 0.423972 2.2:-71214138 MS.gene01192:intron
GTTAAATCTGCATTGACATC+TGG 0.433737 2.2:-71216497 MS.gene01192:CDS
ACAAAATATGTTGGCCTCAA+AGG 0.435305 2.2:-71213274 MS.gene01192:CDS
GAAGGAAGGGGTATTGGATT+GGG 0.436773 2.2:-71213845 MS.gene01192:CDS
TTTATAGTAAAGCATGGAAC+TGG 0.441142 2.2:-71216043 MS.gene01192:CDS
CTGATTTCCACAGTCACATC+TGG 0.442660 2.2:+71213934 None:intergenic
TGAAGGAAGGGGTATTGGAT+TGG 0.444630 2.2:-71213846 MS.gene01192:CDS
TGGGATTGCCTGTTGACTCT+AGG 0.445337 2.2:-71213757 MS.gene01192:CDS
AACACCAATGAGATTATCAT+TGG 0.447313 2.2:-71216446 MS.gene01192:CDS
ACTATAAAAGCCATAGCTTC+GGG 0.455105 2.2:+71216058 None:intergenic
AACGCCTGGGTGGTAGGAGG+AGG 0.455554 2.2:-71217363 MS.gene01192:CDS
GGACATGAAGGAAGGGGTAT+TGG 0.459964 2.2:-71213851 MS.gene01192:CDS
CGAATGTCTTCAATGGCCTC+AGG 0.461191 2.2:+71216272 None:intergenic
AAGAAAGAGAGATCAATTAG+TGG 0.461335 2.2:-71214240 MS.gene01192:CDS
TTGGCAAATTCGCGGAGCTT+AGG 0.465644 2.2:+71215221 None:intergenic
TCCTTGACGAATGTCTTCAA+TGG 0.466311 2.2:+71216265 None:intergenic
AAACGAAGGAGACTTGATAA+TGG 0.466614 2.2:-71216098 MS.gene01192:CDS
CAACTCCTCATTGGCTTCTA+CGG 0.466646 2.2:+71213778 None:intergenic
TATCTATCGCTGACTTGATA+AGG 0.467918 2.2:-71215178 MS.gene01192:intron
GGGATTGCCTGTTGACTCTA+GGG 0.469934 2.2:-71213756 MS.gene01192:CDS
AGGCAATCCCAACTCCTCAT+TGG 0.470707 2.2:+71213769 None:intergenic
TGCACGGCAAGAGGAACGCC+TGG 0.474680 2.2:-71217377 MS.gene01192:CDS
CCATATTCCCTAGAGTCAAC+AGG 0.477453 2.2:+71213749 None:intergenic
CGTAGAAGCCAATGAGGAGT+TGG 0.481823 2.2:-71213777 MS.gene01192:CDS
GGAACACCGGCATCAGACTC+AGG 0.482276 2.2:-71216371 MS.gene01192:CDS
GAGACCAAACGTGTGAAAAT+GGG 0.484788 2.2:-71213181 MS.gene01192:CDS
ATTAATCATGCAGATGGTAG+TGG 0.489759 2.2:-71216143 MS.gene01192:intron
ATTGGCAAAGATCTCGTTGT+TGG 0.493985 2.2:-71216428 MS.gene01192:CDS
ATGGTTTGACTGTTTCTGGT+AGG 0.495319 2.2:-71213249 MS.gene01192:CDS
AAGAGGAACGCCTGGGTGGT+AGG 0.495837 2.2:-71217369 MS.gene01192:CDS
CAGATTGAGGCTGCCGGTAG+GGG 0.496302 2.2:-71213893 MS.gene01192:CDS
TATGTTGGCCTCAAAGGCTA+TGG 0.502238 2.2:-71213268 MS.gene01192:CDS
GCTAAACATGGTACCACCAC+AGG 0.505229 2.2:-71215476 MS.gene01192:CDS
ACAGATTGAGGCTGCCGGTA+GGG 0.509746 2.2:-71213894 MS.gene01192:CDS
ATTGGCAACGCCCGAAGCTA+TGG 0.511506 2.2:-71216068 MS.gene01192:CDS
GTTATAAGTCTCTGTTAGAC+GGG 0.512110 2.2:-71214163 MS.gene01192:CDS
ACGTGATAAGAGTTAACAAC+GGG 0.514164 2.2:+71213224 None:intergenic
AAAGCAGCATTGTGAGTTGA+GGG 0.515216 2.2:+71216524 None:intergenic
GCTTATAACTTACAGGATGA+TGG 0.518705 2.2:-71213809 MS.gene01192:CDS
GTAATTTGACAGGGTGACAT+TGG 0.522822 2.2:-71214022 MS.gene01192:intron
AACAATCCAACAAAATATGT+TGG 0.531217 2.2:-71213283 MS.gene01192:CDS
GCCTTACTGTCCACCATCAA+AGG 0.531971 2.2:+71215971 None:intergenic
AGGAACGCCTGGGTGGTAGG+AGG 0.534971 2.2:-71217366 MS.gene01192:CDS
TATTATATTAATACAATGCA+CGG 0.535714 2.2:-71217393 None:intergenic
ACTTGCAATGGAACAGATTG+AGG 0.536805 2.2:-71213906 MS.gene01192:CDS
GGTGGTGTCTTGAAGAGAGC+TGG 0.536885 2.2:-71215344 MS.gene01192:CDS
GTAGAAGCCAATGAGGAGTT+GGG 0.539865 2.2:-71213776 MS.gene01192:CDS
GGTATCCCTGAGTCTGATGC+CGG 0.539984 2.2:+71216365 None:intergenic
AGATAGGGCAACTACAGTAT+TGG 0.540764 2.2:-71215441 MS.gene01192:CDS
AAATCAGCTTGCACTTGCAA+TGG 0.545459 2.2:-71213918 MS.gene01192:CDS
GGAATATGGCATAGGCGCAC+AGG 0.546667 2.2:-71213735 MS.gene01192:intron
CCTGGTCGGTTGAAATCAGC+CGG 0.549582 2.2:+71215395 None:intergenic
AGTTATAAGCACGGAGCTTG+TGG 0.552273 2.2:+71213822 None:intergenic
AGCAAGAATACCTACAATGT+GGG 0.552655 2.2:-71214204 MS.gene01192:CDS
TGACAGGGTGACATTGGAGA+TGG 0.555270 2.2:-71214016 MS.gene01192:intron
GAGTTGAATCTCTAGATGCA+AGG 0.556953 2.2:+71215417 None:intergenic
ATCTCACACAGAACTGCCAC+TGG 0.558496 2.2:+71215275 None:intergenic
ACTTGCTGGTTTGGAGCCAG+TGG 0.560907 2.2:-71215291 MS.gene01192:CDS
TGTTATAAGTCTCTGTTAGA+CGG 0.563415 2.2:-71214164 MS.gene01192:CDS
TTAATACAATGCACGGCAAG+AGG 0.563944 2.2:-71217386 None:intergenic
TGTAGATGATGACGGTTCCA+TGG 0.564406 2.2:-71215252 MS.gene01192:CDS
AAATCTGCATTGACATCTGG+AGG 0.565898 2.2:-71216494 MS.gene01192:CDS
TGGGTGGTAGGAGGAGGCAA+AGG 0.565918 2.2:-71217357 MS.gene01192:CDS
AGGGGTGTCAGCTCAAGATA+GGG 0.566474 2.2:-71215456 MS.gene01192:CDS
GCAAGAATACCTACAATGTG+GGG 0.568107 2.2:-71214203 MS.gene01192:CDS
TTATAACAGTATGATGTGAA+TGG 0.568571 2.2:+71214179 None:intergenic
TTTAGTGGGAAAATATGGCC+TGG 0.569452 2.2:+71215377 None:intergenic
ATTGGAGCTTCCTTTGATGG+TGG 0.572830 2.2:-71215981 MS.gene01192:CDS
ATATACAAGTACTCCCCTAC+CGG 0.574412 2.2:+71213880 None:intergenic
GATTTGGACATCCCTGCAGA+AGG 0.574646 2.2:-71216308 MS.gene01192:CDS
TCTCACGCTTGGCAAATTCG+CGG 0.575937 2.2:+71215213 None:intergenic
TGAAGACATTCGTCAAGGAA+AGG 0.577876 2.2:-71216261 MS.gene01192:intron
TGGAGAAGATGTTCTTGTGA+GGG 0.578569 2.2:-71213996 MS.gene01192:CDS
CGGGATTGAGCATATTGCAA+TGG 0.579779 2.2:-71214144 MS.gene01192:CDS
TACCGCATTCACTGTGACCG+TGG 0.580033 2.2:-71215930 MS.gene01192:intron
CCGGCTGATTTCAACCGACC+AGG 0.580455 2.2:-71215395 MS.gene01192:CDS
AAAAGCAGCATTGTGAGTTG+AGG 0.581051 2.2:+71216523 None:intergenic
ATCTGCATTGACATCTGGAG+GGG 0.586176 2.2:-71216492 MS.gene01192:CDS
ATCTACGCGGACATGAAGGA+AGG 0.590429 2.2:-71213859 MS.gene01192:CDS
GAATGTCTTCAATGGCCTCA+GGG 0.593752 2.2:+71216273 None:intergenic
GTGGGAAAATATGGCCTGGT+CGG 0.598146 2.2:+71215381 None:intergenic
GTATATCTACGCGGACATGA+AGG 0.601774 2.2:-71213863 MS.gene01192:CDS
ATGGAACAGATTGAGGCTGC+CGG 0.604204 2.2:-71213899 MS.gene01192:CDS
TTCCCACTAAAATACAGGGA+TGG 0.605130 2.2:-71215365 MS.gene01192:CDS
ACGGAACTTAACAACGGCAA+TGG 0.613335 2.2:-71213145 MS.gene01192:CDS
TAAGTTCCGTGCCATAGACG+TGG 0.613868 2.2:+71213158 None:intergenic
TTTGCCTCCTCCTACCACCC+AGG 0.614788 2.2:+71217359 None:intergenic
CAGCAAGAATACCTACAATG+TGG 0.617710 2.2:-71214205 MS.gene01192:CDS
ATGGAGAAGATGTTCTTGTG+AGG 0.618966 2.2:-71213997 MS.gene01192:CDS
AGTTGAATCTCTAGATGCAA+GGG 0.619240 2.2:+71215418 None:intergenic
GAGCTTAGGTAATCTAGCCA+TGG 0.622161 2.2:+71215235 None:intergenic
TCTACGCGGACATGAAGGAA+GGG 0.624885 2.2:-71213858 MS.gene01192:CDS
CTAAACATGGTACCACCACA+GGG 0.625510 2.2:-71215475 MS.gene01192:CDS
GACTCTAGGGAATATGGCAT+AGG 0.625669 2.2:-71213743 MS.gene01192:CDS
TGCATCTAGAGATTCAACTC+CGG 0.626692 2.2:-71215414 MS.gene01192:CDS
CCACTAAAATACAGGGATGG+TGG 0.628481 2.2:-71215362 MS.gene01192:CDS
GAACACCGGCATCAGACTCA+GGG 0.628940 2.2:-71216370 MS.gene01192:CDS
GCACGGCAAGAGGAACGCCT+GGG 0.631261 2.2:-71217376 MS.gene01192:CDS
AACAGATTGAGGCTGCCGGT+AGG 0.636736 2.2:-71213895 MS.gene01192:CDS
TTGAGCTGACACCCCTGTGG+TGG 0.636935 2.2:+71215463 None:intergenic
CTACGCGGACATGAAGGAAG+GGG 0.637307 2.2:-71213857 MS.gene01192:CDS
AATGGGCCACGTCTATGGCA+CGG 0.640080 2.2:-71213164 MS.gene01192:CDS
GCCATTGAAGACATTCGTCA+AGG 0.640993 2.2:-71216266 MS.gene01192:CDS
CGGCAAGAGGAACGCCTGGG+TGG 0.641051 2.2:-71217373 MS.gene01192:CDS
TATTTGTAGGATGCTAAACA+TGG 0.642940 2.2:-71215488 MS.gene01192:intron
AATCTGCATTGACATCTGGA+GGG 0.646026 2.2:-71216493 MS.gene01192:CDS
CATCCTGTAAGTTATAAGCA+CGG 0.654892 2.2:+71213813 None:intergenic
TCTGCATTGACATCTGGAGG+GGG 0.656751 2.2:-71216491 MS.gene01192:CDS
TACCACGGTCACAGTGAATG+CGG 0.656958 2.2:+71215928 None:intergenic
TGTGAGATTGTAGATGATGA+CGG 0.659733 2.2:-71215260 MS.gene01192:CDS
GATGAAGATAGAGAAAACGA+AGG 0.663974 2.2:-71216112 MS.gene01192:CDS
GGAACAGTCTAATGGAACAC+CGG 0.671680 2.2:-71216384 MS.gene01192:CDS
CAAGAATACCTACAATGTGG+GGG 0.677391 2.2:-71214202 MS.gene01192:CDS
ATCTTGAGCTGACACCCCTG+TGG 0.696438 2.2:+71215460 None:intergenic
TGATACCGTAGAAGCCAATG+AGG 0.696608 2.2:-71213783 MS.gene01192:CDS
GACGTGATAAGAGTTAACAA+CGG 0.711055 2.2:+71213223 None:intergenic
GGATCTGCCAGATGTGACTG+TGG 0.728800 2.2:-71213941 MS.gene01192:CDS
TATGGCACGGAACTTAACAA+CGG 0.741429 2.2:-71213151 MS.gene01192:CDS
GGAGTACTTGTATATCTACG+CGG 0.793030 2.2:-71213872 MS.gene01192:CDS
TAAACATGGTACCACCACAG+GGG 0.794302 2.2:-71215474 MS.gene01192:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAATTTGTTGAAATTAAA+TGG - chr2.2:71214850-71214869 MS.gene01192:intron 10.0%
!! TATAATTCACTTTAACAATA+GGG + chr2.2:71213928-71213947 None:intergenic 15.0%
!! TCTTATTATTTGCATATTTA+TGG - chr2.2:71215358-71215377 MS.gene01192:CDS 15.0%
!! TGGATCATTAAAAAATATAT+GGG + chr2.2:71213513-71213532 None:intergenic 15.0%
!! TTATAATTCACTTTAACAAT+AGG + chr2.2:71213929-71213948 None:intergenic 15.0%
!! TTATTGTAAAAAATCCTTTA+TGG + chr2.2:71216794-71216813 None:intergenic 15.0%
!!! AATGGAATTTTTATATTTTC+TGG - chr2.2:71215616-71215635 MS.gene01192:intron 15.0%
!!! ACTATTTAAAATGTATTTGT+AGG - chr2.2:71214976-71214995 MS.gene01192:intron 15.0%
!!! ATTTTAACTGTTTAAATACA+TGG - chr2.2:71217061-71217080 MS.gene01192:intron 15.0%
!!! TGTTTATTAAAGAGATATTT+TGG - chr2.2:71216904-71216923 MS.gene01192:intron 15.0%
!! AAAAAAAAACTCCTATTCAA+TGG - chr2.2:71215660-71215679 MS.gene01192:intron 20.0%
!! AATATATTAGAATTGCTCAA+TGG - chr2.2:71216766-71216785 MS.gene01192:intron 20.0%
!! ACAAAACTATTCAAATCAAA+TGG - chr2.2:71213379-71213398 MS.gene01192:intron 20.0%
!! ATTGACATTGTTCAATTAAA+TGG - chr2.2:71216939-71216958 MS.gene01192:intron 20.0%
!! GGATCATTAAAAAATATATG+GGG + chr2.2:71213512-71213531 None:intergenic 20.0%
!! GTGGATCATTAAAAAATATA+TGG + chr2.2:71213514-71213533 None:intergenic 20.0%
!! TAAAAAATATATGGGGAAAA+TGG + chr2.2:71213505-71213524 None:intergenic 20.0%
!! TTCCTTAATTAGAATAGATT+CGG + chr2.2:71214077-71214096 None:intergenic 20.0%
!! TTGATATCTCACAATATATA+TGG - chr2.2:71215449-71215468 MS.gene01192:CDS 20.0%
!!! AAGTTAATTTGGTCAAATTA+AGG + chr2.2:71213347-71213366 None:intergenic 20.0%
!!! ATTAAATGGTTTTCAAATCA+AGG - chr2.2:71214864-71214883 MS.gene01192:intron 20.0%
!!! ATTGAATAATTTGAAGTGAT+TGG + chr2.2:71213900-71213919 None:intergenic 20.0%
!!! TTTTACAATAACATTTTGAG+AGG - chr2.2:71216803-71216822 MS.gene01192:intron 20.0%
! AACAAAATCTATCATGATCT+TGG + chr2.2:71214313-71214332 None:intergenic 25.0%
! AACAATCCAACAAAATATGT+TGG - chr2.2:71217194-71217213 MS.gene01192:intron 25.0%
! ACAAGGAGATTAAAACTTAT+TGG - chr2.2:71216200-71216219 MS.gene01192:intron 25.0%
! ACAATGTCAATTTAGTCATT+CGG + chr2.2:71216930-71216949 None:intergenic 25.0%
! ACTAAATGATTGAACTAACT+CGG - chr2.2:71215484-71215503 MS.gene01192:intron 25.0%
! ACTAAGGAAATGTTGTTAAA+TGG - chr2.2:71214630-71214649 MS.gene01192:intron 25.0%
! ATTTGATTCTTCAACAGTAT+TGG + chr2.2:71217363-71217382 None:intergenic 25.0%
! CGTATCATATCATATGATAA+AGG + chr2.2:71213556-71213575 None:intergenic 25.0%
! TAGAAAATGTTGTCAATAAG+AGG - chr2.2:71214705-71214724 MS.gene01192:intron 25.0%
! TATAAAAATTCCATTCAGTG+AGG + chr2.2:71215611-71215630 None:intergenic 25.0%
! TATCAACTCATTTAGTATGT+TGG + chr2.2:71215435-71215454 None:intergenic 25.0%
! TATTGTATTGAGAAAAGAAG+TGG + chr2.2:71213533-71213552 None:intergenic 25.0%
! TGAAAAACAGATCAAATCAA+AGG + chr2.2:71213866-71213885 None:intergenic 25.0%
! TGAACTAGAAGAAGTTAATT+TGG + chr2.2:71213358-71213377 None:intergenic 25.0%
! TGACTATTTGTAATTTGACA+GGG - chr2.2:71216446-71216465 MS.gene01192:CDS 25.0%
! TTAATCTGTTATGCTATTGA+AGG - chr2.2:71214900-71214919 MS.gene01192:intron 25.0%
! TTATAACAGTATGATGTGAA+TGG + chr2.2:71216301-71216320 None:intergenic 25.0%
! TTATCATATGATATGATACG+TGG - chr2.2:71213556-71213575 MS.gene01192:intron 25.0%
! TTGACTATTTGTAATTTGAC+AGG - chr2.2:71216445-71216464 MS.gene01192:CDS 25.0%
! TTGTTTATTAATCATGCAGA+TGG - chr2.2:71214328-71214347 MS.gene01192:intron 25.0%
!! AATAATTTGAAGTGATTGGA+TGG + chr2.2:71213896-71213915 None:intergenic 25.0%
!! AATTTTCTGTCACTCTTTTA+AGG - chr2.2:71213833-71213852 MS.gene01192:CDS 25.0%
!! ATAAAATGAAGGAACACTTT+TGG - chr2.2:71215744-71215763 MS.gene01192:intron 25.0%
!! ATATTTTCCCACTAAAATAC+AGG - chr2.2:71215107-71215126 MS.gene01192:intron 25.0%
!! TACTGAACTTACTATTTTGT+TGG + chr2.2:71215876-71215895 None:intergenic 25.0%
!! TATTTTCCCACTAAAATACA+GGG - chr2.2:71215108-71215127 MS.gene01192:intron 25.0%
!!! AAATCTGTTATGTTTTGAAC+TGG - chr2.2:71213767-71213786 MS.gene01192:CDS 25.0%
!!! ATAATCTCATTGGTGTTTTT+CGG + chr2.2:71214028-71214047 None:intergenic 25.0%
!!! TGTATTTTAGTGGGAAAATA+TGG + chr2.2:71215108-71215127 None:intergenic 25.0%
!!! TTAACTTTAGGATCCAAATA+GGG - chr2.2:71215718-71215737 MS.gene01192:intron 25.0%
!!! TTTGATCTGTTTTTCAATGT+AGG - chr2.2:71213870-71213889 MS.gene01192:CDS 25.0%
AAATAGGGTGGATAAAATGA+AGG - chr2.2:71215733-71215752 MS.gene01192:intron 30.0%
AACACCAATGAGATTATCAT+TGG - chr2.2:71214031-71214050 MS.gene01192:intron 30.0%
AACTGTGTGTTAACTAACAA+TGG + chr2.2:71213588-71213607 None:intergenic 30.0%
AAGAAAGAGAGATCAATTAG+TGG - chr2.2:71216237-71216256 MS.gene01192:intron 30.0%
AAGGAAATGTTGTTAAATGG+CGG - chr2.2:71214633-71214652 MS.gene01192:intron 30.0%
AAGTCATTAGAGCGAAAATT+GGG - chr2.2:71215964-71215983 MS.gene01192:CDS 30.0%
AATCATTTAGTCACGATTCA+AGG + chr2.2:71215475-71215494 None:intergenic 30.0%
AATGGTTCTCATAGAAAATG+GGG - chr2.2:71215678-71215697 MS.gene01192:intron 30.0%
ACGAATAGTAATACATACCA+CGG + chr2.2:71214567-71214586 None:intergenic 30.0%
ACTATAGTAATGTATCACTC+AGG - chr2.2:71215775-71215794 MS.gene01192:intron 30.0%
CAATGGTTCTCATAGAAAAT+GGG - chr2.2:71215677-71215696 MS.gene01192:intron 30.0%
CTAATTAAGGAACAGTCTAA+TGG - chr2.2:71214085-71214104 MS.gene01192:intron 30.0%
GAAAAAGTAGTAACATTCCA+AGG + chr2.2:71217130-71217149 None:intergenic 30.0%
GAGAGAAAGATGTTAACTTT+AGG - chr2.2:71215706-71215725 MS.gene01192:intron 30.0%
TAATTGCATCTATACACATC+TGG - chr2.2:71214586-71214605 MS.gene01192:intron 30.0%
TACTATAAAAGCCATAGCTT+CGG + chr2.2:71214423-71214442 None:intergenic 30.0%
TATTTGTAGGATGCTAAACA+TGG - chr2.2:71214989-71215008 MS.gene01192:intron 30.0%
TCAATGGTTCTCATAGAAAA+TGG - chr2.2:71215676-71215695 MS.gene01192:intron 30.0%
TGAAGAAGATCTTGATAGAT+TGG - chr2.2:71214478-71214497 MS.gene01192:intron 30.0%
TGCCGAATCTATTCTAATTA+AGG - chr2.2:71214072-71214091 MS.gene01192:intron 30.0%
TGTATATAATACAGTTTCCG+TGG - chr2.2:71216375-71216394 MS.gene01192:CDS 30.0%
TGTTATAAGTCTCTGTTAGA+CGG - chr2.2:71216313-71216332 MS.gene01192:CDS 30.0%
TTACCATATCTCTTTGACTA+AGG - chr2.2:71214614-71214633 MS.gene01192:intron 30.0%
TTATATATAGAGACAGAGAG+AGG + chr2.2:71213244-71213263 None:intergenic 30.0%
TTATGCTATTGAAGGAATTC+TGG - chr2.2:71214908-71214927 MS.gene01192:intron 30.0%
TTCAGTCATTGAAACTGTAA+GGG + chr2.2:71217004-71217023 None:intergenic 30.0%
TTCTATGAGAACCATTGAAT+AGG + chr2.2:71215674-71215693 None:intergenic 30.0%
TTGAATGTAATCACATGTGT+CGG + chr2.2:71213716-71213735 None:intergenic 30.0%
TTGCTTATTTGGTCATAACA+AGG - chr2.2:71216183-71216202 MS.gene01192:intron 30.0%
TTTATAGTAAAGCATGGAAC+TGG - chr2.2:71214434-71214453 MS.gene01192:intron 30.0%
TTTCAGTCATTGAAACTGTA+AGG + chr2.2:71217005-71217024 None:intergenic 30.0%
TTTCCTTAGTCAAAGAGATA+TGG + chr2.2:71214620-71214639 None:intergenic 30.0%
TTTGCCAATGATAATCTCAT+TGG + chr2.2:71214038-71214057 None:intergenic 30.0%
TTTGTTAAAACCTCACTGAA+TGG - chr2.2:71215598-71215617 MS.gene01192:intron 30.0%
! AATTTTCAAATTCTCACGCT+TGG + chr2.2:71215278-71215297 None:intergenic 30.0%
! ATGGCTTTTATAGTAAAGCA+TGG - chr2.2:71214428-71214447 MS.gene01192:intron 30.0%
! GATACTTCTTGTTGCTTATT+TGG - chr2.2:71216172-71216191 MS.gene01192:intron 30.0%
! GTTCTTAATTTTGTCTGATG+AGG - chr2.2:71215515-71215534 MS.gene01192:intron 30.0%
! TTCATTTTATCCACCCTATT+TGG + chr2.2:71215734-71215753 None:intergenic 30.0%
!! GTTAACTTTAGGATCCAAAT+AGG - chr2.2:71215717-71215736 MS.gene01192:intron 30.0%
!! TGTATAAGTCTCGTTTTTCA+AGG - chr2.2:71216135-71216154 MS.gene01192:intron 30.0%
!!! ACTACTTTTTCAGATACTGA+GGG - chr2.2:71217139-71217158 MS.gene01192:intron 30.0%
!!! CTCGTTGCAGTTTTAAATTT+TGG - chr2.2:71213810-71213829 MS.gene01192:CDS 30.0%
!!! TACTACTTTTTCAGATACTG+AGG - chr2.2:71217138-71217157 MS.gene01192:intron 30.0%
!!! TGTTGTTGTTGTTGTTGTTT+TGG + chr2.2:71213291-71213310 None:intergenic 30.0%
AAACGAAGGAGACTTGATAA+TGG - chr2.2:71214379-71214398 MS.gene01192:intron 35.0%
AAAGTCGTCTCTATGAAAGA+CGG + chr2.2:71213205-71213224 None:intergenic 35.0%
ACACAAGACAAGACATAATC+AGG - chr2.2:71215937-71215956 MS.gene01192:CDS 35.0%
ACGTGATAAGAGTTAACAAC+GGG + chr2.2:71217256-71217275 None:intergenic 35.0%
ACTATAAAAGCCATAGCTTC+GGG + chr2.2:71214422-71214441 None:intergenic 35.0%
AGCAAGAATACCTACAATGT+GGG - chr2.2:71216273-71216292 MS.gene01192:CDS 35.0%
AGTCATTAGAGCGAAAATTG+GGG - chr2.2:71215965-71215984 MS.gene01192:CDS 35.0%
AGTTGAATCTCTAGATGCAA+GGG + chr2.2:71215062-71215081 None:intergenic 35.0%
ATAGAAGAAAAACCTTCTGC+AGG + chr2.2:71214184-71214203 None:intergenic 35.0%
ATGGAAAGTTATCACAGACA+TGG - chr2.2:71217098-71217117 MS.gene01192:intron 35.0%
ATTAATCATGCAGATGGTAG+TGG - chr2.2:71214334-71214353 MS.gene01192:intron 35.0%
ATTGCTCAATGGTTCCATAA+AGG - chr2.2:71216777-71216796 MS.gene01192:intron 35.0%
CAAGTCATTAGAGCGAAAAT+TGG - chr2.2:71215963-71215982 MS.gene01192:CDS 35.0%
CATCCTGTAAGTTATAAGCA+CGG + chr2.2:71216667-71216686 None:intergenic 35.0%
CTCTAAGTATCTCTTGTTCT+CGG + chr2.2:71217279-71217298 None:intergenic 35.0%
GAAGAATCAAATGTTGTTGC+TGG - chr2.2:71217371-71217390 MS.gene01192:CDS 35.0%
GACGTGATAAGAGTTAACAA+CGG + chr2.2:71217257-71217276 None:intergenic 35.0%
GATGAAGATAGAGAAAACGA+AGG - chr2.2:71214365-71214384 MS.gene01192:intron 35.0%
GCAAAATATAGGTAGTTCCA+CGG + chr2.2:71216395-71216414 None:intergenic 35.0%
GCTTATAACTTACAGGATGA+TGG - chr2.2:71216668-71216687 MS.gene01192:intron 35.0%
GGACTACAATGACTATGATT+TGG - chr2.2:71214153-71214172 MS.gene01192:CDS 35.0%
GTTATAAGTCTCTGTTAGAC+GGG - chr2.2:71216314-71216333 MS.gene01192:CDS 35.0%
TAGAAGAAAAACCTTCTGCA+GGG + chr2.2:71214183-71214202 None:intergenic 35.0%
TGAGCATATTGCAATGGTTA+AGG - chr2.2:71216339-71216358 MS.gene01192:CDS 35.0%
TGGTTTGATGAGATTAACAG+TGG + chr2.2:71213485-71213504 None:intergenic 35.0%
TGTCTAACTGGAGACATATT+TGG - chr2.2:71216515-71216534 MS.gene01192:CDS 35.0%
TGTGAGATTGTAGATGATGA+CGG - chr2.2:71215217-71215236 MS.gene01192:CDS 35.0%
TGTTGTATGAGACTGTATGT+TGG - chr2.2:71215839-71215858 MS.gene01192:intron 35.0%
TTGAACTAACTCGGACTTTA+TGG - chr2.2:71215493-71215512 MS.gene01192:intron 35.0%
! ACAAAATATGTTGGCCTCAA+AGG - chr2.2:71217203-71217222 MS.gene01192:intron 35.0%
! ATTTTGCAACACTTAGCGAT+GGG - chr2.2:71216408-71216427 MS.gene01192:CDS 35.0%
! CGCTAAGTGTTGCAAAATAT+AGG + chr2.2:71216406-71216425 None:intergenic 35.0%
! GTTAAATCTGCATTGACATC+TGG - chr2.2:71213980-71213999 MS.gene01192:CDS 35.0%
! TATTTTGCAACACTTAGCGA+TGG - chr2.2:71216407-71216426 MS.gene01192:CDS 35.0%
! TTGAGGCCAACATATTTTGT+TGG + chr2.2:71217203-71217222 None:intergenic 35.0%
!! TATCTATCGCTGACTTGATA+AGG - chr2.2:71215299-71215318 MS.gene01192:CDS 35.0%
!! TGAAGGAATTCTGGTTTGAA+CGG - chr2.2:71214917-71214936 MS.gene01192:intron 35.0%
!! TGTTTTTCGGATAGGAAAGT+AGG + chr2.2:71214015-71214034 None:intergenic 35.0%
!! TTTCAAGGTTTTTGCTGTCT+GGG - chr2.2:71216150-71216169 MS.gene01192:intron 35.0%
!! TTTTCAAGGTTTTTGCTGTC+TGG - chr2.2:71216149-71216168 MS.gene01192:intron 35.0%
AAAAGCAGCATTGTGAGTTG+AGG + chr2.2:71213957-71213976 None:intergenic 40.0%
AAATCAGCTTGCACTTGCAA+TGG - chr2.2:71216559-71216578 MS.gene01192:intron 40.0%
ACAGTCTCATACAACACTGT+AGG + chr2.2:71215835-71215854 None:intergenic 40.0%
ACAGTGGATCATGAAAAGAG+AGG + chr2.2:71213469-71213488 None:intergenic 40.0%
ACTTGCAATGGAACAGATTG+AGG - chr2.2:71216571-71216590 MS.gene01192:intron 40.0%
AGAGACCAAACGTGTGAAAA+TGG - chr2.2:71217295-71217314 MS.gene01192:intron 40.0%
AGATAGGGCAACTACAGTAT+TGG - chr2.2:71215036-71215055 MS.gene01192:intron 40.0%
AGTTCAGTATTCCAGAGATG+AGG - chr2.2:71215887-71215906 MS.gene01192:intron 40.0%
ATATACAAGTACTCCCCTAC+CGG + chr2.2:71216600-71216619 None:intergenic 40.0%
ATGGAGAAGATGTTCTTGTG+AGG - chr2.2:71216480-71216499 MS.gene01192:CDS 40.0%
ATGTATCACTCAGGCTTAGA+AGG - chr2.2:71215784-71215803 MS.gene01192:intron 40.0%
ATTGGCAAAGATCTCGTTGT+TGG - chr2.2:71214049-71214068 MS.gene01192:intron 40.0%
CAAGAATACCTACAATGTGG+GGG - chr2.2:71216275-71216294 MS.gene01192:CDS 40.0%
CAATCGACAACATTGGACTA+AGG - chr2.2:71214796-71214815 MS.gene01192:intron 40.0%
CAGCAAGAATACCTACAATG+TGG - chr2.2:71216272-71216291 MS.gene01192:CDS 40.0%
CTCTATGAAAGACGGAAAGT+GGG + chr2.2:71213197-71213216 None:intergenic 40.0%
GAATTTGACTACCCTGTATC+TGG + chr2.2:71216084-71216103 None:intergenic 40.0%
GAGACCAAACGTGTGAAAAT+GGG - chr2.2:71217296-71217315 MS.gene01192:intron 40.0%
GAGTTGAATCTCTAGATGCA+AGG + chr2.2:71215063-71215082 None:intergenic 40.0%
GCAAGAATACCTACAATGTG+GGG - chr2.2:71216274-71216293 MS.gene01192:CDS 40.0%
GTAATTTGACAGGGTGACAT+TGG - chr2.2:71216455-71216474 MS.gene01192:CDS 40.0%
GTACTTAAACCACATAAGCC+AGG + chr2.2:71216020-71216039 None:intergenic 40.0%
GTCATTGAAACTGTAAGGGT+CGG + chr2.2:71217000-71217019 None:intergenic 40.0%
TAGATTGGAGCTTCCTTTGA+TGG - chr2.2:71214493-71214512 MS.gene01192:intron 40.0%
TATGGCACGGAACTTAACAA+CGG - chr2.2:71217326-71217345 MS.gene01192:intron 40.0%
TCCTTGACGAATGTCTTCAA+TGG + chr2.2:71214215-71214234 None:intergenic 40.0%
TCTATGAAAGACGGAAAGTG+GGG + chr2.2:71213196-71213215 None:intergenic 40.0%
TCTCTATGAAAGACGGAAAG+TGG + chr2.2:71213198-71213217 None:intergenic 40.0%
TGAAGACATTCGTCAAGGAA+AGG - chr2.2:71214216-71214235 MS.gene01192:CDS 40.0%
TGCATCTAGAGATTCAACTC+CGG - chr2.2:71215063-71215082 MS.gene01192:intron 40.0%
TGGAGAAGATGTTCTTGTGA+GGG - chr2.2:71216481-71216500 MS.gene01192:CDS 40.0%
TTCCCACTAAAATACAGGGA+TGG - chr2.2:71215112-71215131 MS.gene01192:intron 40.0%
TTTAGTGGGAAAATATGGCC+TGG + chr2.2:71215103-71215122 None:intergenic 40.0%
TTTCAGATACTGAGGGATCT+AGG - chr2.2:71217146-71217165 MS.gene01192:intron 40.0%
! AAAGCAGCATTGTGAGTTGA+GGG + chr2.2:71213956-71213975 None:intergenic 40.0%
! AAATCTGCATTGACATCTGG+AGG - chr2.2:71213983-71214002 MS.gene01192:CDS 40.0%
! AATCTGCATTGACATCTGGA+GGG - chr2.2:71213984-71214003 MS.gene01192:CDS 40.0%
! ACTCTACCATTTTCCTACAG+TGG + chr2.2:71215997-71216016 None:intergenic 40.0%
! AGGTTTTTCTTCTATCCCTG+AGG - chr2.2:71214189-71214208 MS.gene01192:CDS 40.0%
! CTCTACCATTTTCCTACAGT+GGG + chr2.2:71215996-71216015 None:intergenic 40.0%
! GGAGTACTTGTATATCTACG+CGG - chr2.2:71216605-71216624 MS.gene01192:intron 40.0%
! TCTTACCATACTTGCTGGTT+TGG - chr2.2:71215177-71215196 MS.gene01192:intron 40.0%
!! AAGGAATTCTGGTTTGAACG+GGG - chr2.2:71214919-71214938 MS.gene01192:intron 40.0%
!! ACTTTAGGATCCAAATAGGG+TGG - chr2.2:71215721-71215740 MS.gene01192:intron 40.0%
!! ATCGCTGACTTGATAAGGTA+TGG - chr2.2:71215304-71215323 MS.gene01192:CDS 40.0%
!! ATGGTTTGACTGTTTCTGGT+AGG - chr2.2:71217228-71217247 MS.gene01192:intron 40.0%
!! CATTCATAGAAGCACTGACT+AGG - chr2.2:71216050-71216069 MS.gene01192:CDS 40.0%
!! CTCATTGGTGTTTTTCGGAT+AGG + chr2.2:71214023-71214042 None:intergenic 40.0%
!! CTTGATAATGGCAGCAGAAT+TGG - chr2.2:71214391-71214410 MS.gene01192:intron 40.0%
!! GAAGGAATTCTGGTTTGAAC+GGG - chr2.2:71214918-71214937 MS.gene01192:intron 40.0%
!! TTAGCGATGGGTTTTTGACA+AGG - chr2.2:71216420-71216439 MS.gene01192:CDS 40.0%
!!! ACCAAGCACTTTTTTCTCTG+CGG - chr2.2:71214132-71214151 MS.gene01192:intron 40.0%
!!! ATGTTGTTGCTGGCTTTTGA+TGG - chr2.2:71217381-71217400 MS.gene01192:CDS 40.0%
!!! CACCATCCCTGTATTTTAGT+GGG + chr2.2:71215117-71215136 None:intergenic 40.0%
AAAGAGAGGAGAAGTTACCG+TGG + chr2.2:71213455-71213474 None:intergenic 45.0%
AATCGCGCAATCGACAACAT+TGG - chr2.2:71214789-71214808 MS.gene01192:intron 45.0%
ACGGAACTTAACAACGGCAA+TGG - chr2.2:71217332-71217351 MS.gene01192:intron 45.0%
AGGAAGGTAGACCAGATACA+GGG - chr2.2:71216070-71216089 MS.gene01192:CDS 45.0%
AGTTATAAGCACGGAGCTTG+TGG + chr2.2:71216658-71216677 None:intergenic 45.0%
ATTGGAGCTTCCTTTGATGG+TGG - chr2.2:71214496-71214515 MS.gene01192:intron 45.0%
CACAGACATGGCTTAAACCT+TGG - chr2.2:71217110-71217129 MS.gene01192:intron 45.0%
CAGTCAAACCATAGCCTTTG+AGG + chr2.2:71217220-71217239 None:intergenic 45.0%
CCACTAAAATACAGGGATGG+TGG - chr2.2:71215115-71215134 MS.gene01192:intron 45.0%
CCATATTCCCTAGAGTCAAC+AGG + chr2.2:71216731-71216750 None:intergenic 45.0%
CGGGATTGAGCATATTGCAA+TGG - chr2.2:71216333-71216352 MS.gene01192:CDS 45.0%
CGGGGTTAGGCATTTATTGA+TGG - chr2.2:71214937-71214956 MS.gene01192:intron 45.0%
CTAAACATGGTACCACCACA+GGG - chr2.2:71215002-71215021 MS.gene01192:intron 45.0%
CTATGAAAGACGGAAAGTGG+GGG + chr2.2:71213195-71213214 None:intergenic 45.0%
CTGATTTCCACAGTCACATC+TGG + chr2.2:71216546-71216565 None:intergenic 45.0%
GAATGTCTTCAATGGCCTCA+GGG + chr2.2:71214207-71214226 None:intergenic 45.0%
GAGCTTAGGTAATCTAGCCA+TGG + chr2.2:71215245-71215264 None:intergenic 45.0%
GCCATTGAAGACATTCGTCA+AGG - chr2.2:71214211-71214230 MS.gene01192:CDS 45.0%
GCTCCGTGCTTATAACTTAC+AGG - chr2.2:71216661-71216680 MS.gene01192:intron 45.0%
GCTGATCTTACCATACTTGC+TGG - chr2.2:71215172-71215191 MS.gene01192:intron 45.0%
GGAACAGTCTAATGGAACAC+CGG - chr2.2:71214093-71214112 MS.gene01192:intron 45.0%
GGCTATGGTTTGACTGTTTC+TGG - chr2.2:71217224-71217243 MS.gene01192:intron 45.0%
GTAGAAGCCAATGAGGAGTT+GGG - chr2.2:71216701-71216720 MS.gene01192:intron 45.0%
GTAGGAAAATGGTAGAGTCC+TGG - chr2.2:71215999-71216018 MS.gene01192:CDS 45.0%
GTATATCTACGCGGACATGA+AGG - chr2.2:71216614-71216633 MS.gene01192:intron 45.0%
TAAACATGGTACCACCACAG+GGG - chr2.2:71215003-71215022 MS.gene01192:intron 45.0%
TAACGTTCTCACCTCATCTC+TGG + chr2.2:71215901-71215920 None:intergenic 45.0%
TAGCTCCCACTGTAGGAAAA+TGG - chr2.2:71215988-71216007 MS.gene01192:CDS 45.0%
TAGGAAGGTAGACCAGATAC+AGG - chr2.2:71216069-71216088 MS.gene01192:CDS 45.0%
TATGAAAGACGGAAAGTGGG+GGG + chr2.2:71213194-71213213 None:intergenic 45.0%
TGATACCGTAGAAGCCAATG+AGG - chr2.2:71216694-71216713 MS.gene01192:intron 45.0%
! ATCTGCATTGACATCTGGAG+GGG - chr2.2:71213985-71214004 MS.gene01192:CDS 45.0%
! GACTCTAGGGAATATGGCAT+AGG - chr2.2:71216734-71216753 MS.gene01192:intron 45.0%
! GTACACTCAGAGTGTCTAAC+TGG - chr2.2:71216503-71216522 MS.gene01192:CDS 45.0%
! TATGTTGGCCTCAAAGGCTA+TGG - chr2.2:71217209-71217228 MS.gene01192:intron 45.0%
!! ATTCTGGTTTGAACGGGGTT+AGG - chr2.2:71214924-71214943 MS.gene01192:intron 45.0%
!! CAACTCCTCATTGGCTTCTA+CGG + chr2.2:71216702-71216721 None:intergenic 45.0%
!! CATAGAAGCACTGACTAGGA+AGG - chr2.2:71216054-71216073 MS.gene01192:CDS 45.0%
!! CCACCATCCCTGTATTTTAG+TGG + chr2.2:71215118-71215137 None:intergenic 45.0%
!! CCTGTTGACTCTAGGGAATA+TGG - chr2.2:71216728-71216747 MS.gene01192:intron 45.0%
!! GAAGGAAGGGGTATTGGATT+GGG - chr2.2:71216632-71216651 MS.gene01192:intron 45.0%
!! TCCGCAGAGAAAAAAGTGCT+TGG + chr2.2:71214136-71214155 None:intergenic 45.0%
!! TCCTTTGATGGTGGACAGTA+AGG - chr2.2:71214505-71214524 MS.gene01192:intron 45.0%
!! TGAAGGAAGGGGTATTGGAT+TGG - chr2.2:71216631-71216650 MS.gene01192:intron 45.0%
!! TGTAGATGATGACGGTTCCA+TGG - chr2.2:71215225-71215244 MS.gene01192:CDS 45.0%
AAACTGTAAGGGTCGGTCTG+AGG + chr2.2:71216993-71217012 None:intergenic 50.0%
AGGCAATCCCAACTCCTCAT+TGG + chr2.2:71216711-71216730 None:intergenic 50.0%
ATCTACGCGGACATGAAGGA+AGG - chr2.2:71216618-71216637 MS.gene01192:intron 50.0%
ATCTCACACAGAACTGCCAC+TGG + chr2.2:71215205-71215224 None:intergenic 50.0%
ATGGAACAGATTGAGGCTGC+CGG - chr2.2:71216578-71216597 MS.gene01192:intron 50.0%
CAGGAAGTAACGCAGAAACG+CGG + chr2.2:71213169-71213188 None:intergenic 50.0%
CGAATGTCTTCAATGGCCTC+AGG + chr2.2:71214208-71214227 None:intergenic 50.0%
CGTAGAAGCCAATGAGGAGT+TGG - chr2.2:71216700-71216719 MS.gene01192:intron 50.0%
GAAGTTACCGTGGACAAGAG+AGG + chr2.2:71213445-71213464 None:intergenic 50.0%
GATTTGGACATCCCTGCAGA+AGG - chr2.2:71214169-71214188 MS.gene01192:CDS 50.0%
GCCTTACTGTCCACCATCAA+AGG + chr2.2:71214509-71214528 None:intergenic 50.0%
GCTAAACATGGTACCACCAC+AGG - chr2.2:71215001-71215020 MS.gene01192:intron 50.0%
GTGAAAATGGGCCACGTCTA+TGG - chr2.2:71217308-71217327 MS.gene01192:intron 50.0%
GTGGGAAAATATGGCCTGGT+CGG + chr2.2:71215099-71215118 None:intergenic 50.0%
TAAGTTCCGTGCCATAGACG+TGG + chr2.2:71217322-71217341 None:intergenic 50.0%
TACCACGGTCACAGTGAATG+CGG + chr2.2:71214552-71214571 None:intergenic 50.0%
TCTACGCGGACATGAAGGAA+GGG - chr2.2:71216619-71216638 MS.gene01192:intron 50.0%
TCTCACGCTTGGCAAATTCG+CGG + chr2.2:71215267-71215286 None:intergenic 50.0%
TGACAGGGTGACATTGGAGA+TGG - chr2.2:71216461-71216480 MS.gene01192:CDS 50.0%
TGGCTCCAAACCAGCAAGTA+TGG + chr2.2:71215185-71215204 None:intergenic 50.0%
TGGTAGAGTCCTGGCTTATG+TGG - chr2.2:71216008-71216027 MS.gene01192:CDS 50.0%
TTGGCAAATTCGCGGAGCTT+AGG + chr2.2:71215259-71215278 None:intergenic 50.0%
! GGACATGAAGGAAGGGGTAT+TGG - chr2.2:71216626-71216645 MS.gene01192:intron 50.0%
! GTGGCCCATTTTCACACGTT+TGG + chr2.2:71217303-71217322 None:intergenic 50.0%
! TCTGCATTGACATCTGGAGG+GGG - chr2.2:71213986-71214005 MS.gene01192:CDS 50.0%
! TGTTGTCGATTGCGCGATTG+CGG + chr2.2:71214788-71214807 None:intergenic 50.0%
!! AGGGGTGTCAGCTCAAGATA+GGG - chr2.2:71215021-71215040 MS.gene01192:intron 50.0%
!! GGGATTGCCTGTTGACTCTA+GGG - chr2.2:71216721-71216740 MS.gene01192:intron 50.0%
!! TGGGATTGCCTGTTGACTCT+AGG - chr2.2:71216720-71216739 MS.gene01192:intron 50.0%
AACAGATTGAGGCTGCCGGT+AGG - chr2.2:71216582-71216601 MS.gene01192:intron 55.0%
AATGGGCCACGTCTATGGCA+CGG - chr2.2:71217313-71217332 MS.gene01192:intron 55.0%
ACAGATTGAGGCTGCCGGTA+GGG - chr2.2:71216583-71216602 MS.gene01192:intron 55.0%
ATCTTGAGCTGACACCCCTG+TGG + chr2.2:71215020-71215039 None:intergenic 55.0%
ATTGGCAACGCCCGAAGCTA+TGG - chr2.2:71214409-71214428 MS.gene01192:intron 55.0%
ATTGGGGTAGCTCCCACTGT+AGG - chr2.2:71215981-71216000 MS.gene01192:CDS 55.0%
CACCTCTCCTCTCTTGTCCA+CGG - chr2.2:71213435-71213454 MS.gene01192:intron 55.0%
CAGAAACGCGGTGTGCTAAC+AGG + chr2.2:71213157-71213176 None:intergenic 55.0%
CCTGGTCGGTTGAAATCAGC+CGG + chr2.2:71215085-71215104 None:intergenic 55.0%
CTACGCGGACATGAAGGAAG+GGG - chr2.2:71216620-71216639 MS.gene01192:intron 55.0%
GAACACCGGCATCAGACTCA+GGG - chr2.2:71214107-71214126 MS.gene01192:intron 55.0%
GGAATATGGCATAGGCGCAC+AGG - chr2.2:71216742-71216761 MS.gene01192:intron 55.0%
GGATCTGCCAGATGTGACTG+TGG - chr2.2:71216536-71216555 MS.gene01192:CDS 55.0%
GGTATCCCTGAGTCTGATGC+CGG + chr2.2:71214115-71214134 None:intergenic 55.0%
GGTGGTGTCTTGAAGAGAGC+TGG - chr2.2:71215133-71215152 MS.gene01192:intron 55.0%
GTGAATGGCCCCCACATTGT+AGG + chr2.2:71216286-71216305 None:intergenic 55.0%
TACCGCATTCACTGTGACCG+TGG - chr2.2:71214547-71214566 MS.gene01192:intron 55.0%
TACCGTGGACAAGAGAGGAG+AGG + chr2.2:71213440-71213459 None:intergenic 55.0%
TGGACAAGAGAGGAGAGGTG+AGG + chr2.2:71213435-71213454 None:intergenic 55.0%
!! ACTTGCTGGTTTGGAGCCAG+TGG - chr2.2:71215186-71215205 MS.gene01192:CDS 55.0%
!! CAGGGGTGTCAGCTCAAGAT+AGG - chr2.2:71215020-71215039 MS.gene01192:intron 55.0%
AAGAGGAACGCCTGGGTGGT+AGG - chr2.2:71213108-71213127 MS.gene01192:CDS 60.0%
CAGATTGAGGCTGCCGGTAG+GGG - chr2.2:71216584-71216603 MS.gene01192:intron 60.0%
GGAACACCGGCATCAGACTC+AGG - chr2.2:71214106-71214125 MS.gene01192:intron 60.0%
TGGGTGGTAGGAGGAGGCAA+AGG - chr2.2:71213120-71213139 MS.gene01192:CDS 60.0%
TTGAGCTGACACCCCTGTGG+TGG + chr2.2:71215017-71215036 None:intergenic 60.0%
TTTGCCTCCTCCTACCACCC+AGG + chr2.2:71213121-71213140 None:intergenic 60.0%
! CCGGCTGATTTCAACCGACC+AGG - chr2.2:71215082-71215101 MS.gene01192:intron 60.0%
AACGCCTGGGTGGTAGGAGG+AGG - chr2.2:71213114-71213133 MS.gene01192:CDS 65.0%
AGGAACGCCTGGGTGGTAGG+AGG - chr2.2:71213111-71213130 MS.gene01192:CDS 65.0%
GCACGGCAAGAGGAACGCCT+GGG - chr2.2:71213101-71213120 MS.gene01192:CDS 65.0%
TGCACGGCAAGAGGAACGCC+TGG - chr2.2:71213100-71213119 MS.gene01192:CDS 65.0%
! AGACGGAAAGTGGGGGGTGC+AGG + chr2.2:71213188-71213207 None:intergenic 65.0%
CGGCAAGAGGAACGCCTGGG+TGG - chr2.2:71213104-71213123 MS.gene01192:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 71213099 71217400 71213099 ID=MS.gene01192
chr2.2 mRNA 71213099 71217400 71213099 ID=MS.gene01192.t1;Parent=MS.gene01192
chr2.2 exon 71217343 71217400 71217343 ID=MS.gene01192.t1.exon1;Parent=MS.gene01192.t1
chr2.2 CDS 71217343 71217400 71217343 ID=cds.MS.gene01192.t1;Parent=MS.gene01192.t1
chr2.2 exon 71216262 71216560 71216262 ID=MS.gene01192.t1.exon2;Parent=MS.gene01192.t1
chr2.2 CDS 71216262 71216560 71216262 ID=cds.MS.gene01192.t1;Parent=MS.gene01192.t1
chr2.2 exon 71215931 71216152 71215931 ID=MS.gene01192.t1.exon3;Parent=MS.gene01192.t1
chr2.2 CDS 71215931 71216152 71215931 ID=cds.MS.gene01192.t1;Parent=MS.gene01192.t1
chr2.2 exon 71215179 71215501 71215179 ID=MS.gene01192.t1.exon4;Parent=MS.gene01192.t1
chr2.2 CDS 71215179 71215501 71215179 ID=cds.MS.gene01192.t1;Parent=MS.gene01192.t1
chr2.2 exon 71214139 71214268 71214139 ID=MS.gene01192.t1.exon5;Parent=MS.gene01192.t1
chr2.2 CDS 71214139 71214268 71214139 ID=cds.MS.gene01192.t1;Parent=MS.gene01192.t1
chr2.2 exon 71213736 71214032 71213736 ID=MS.gene01192.t1.exon6;Parent=MS.gene01192.t1
chr2.2 CDS 71213736 71214032 71213736 ID=cds.MS.gene01192.t1;Parent=MS.gene01192.t1
chr2.2 exon 71213099 71213347 71213099 ID=MS.gene01192.t1.exon7;Parent=MS.gene01192.t1
chr2.2 CDS 71213099 71213347 71213099 ID=cds.MS.gene01192.t1;Parent=MS.gene01192.t1
Gene Sequence

>MS.gene01192

ATGCACGGCAAGAGGAACGCCTGGGTGGTAGGAGGAGGCAAAGGCATTTCTCGTTCCTGTTAGCACACCGCGTTTCTGCGTTACTTCCTGCACCCCCCACTTTCCGTCTTTCATAGAGACGACTTTACGAATTTCTTTTCTTCCTCTCTCTGTCTCTATATATAACACAAACATTACAAATGTAATCAACCAAAACAACAACAACAACAACAGCATTTTTATTTGATTTGATTTGATTAGTACAACCTTAATTTGACCAAATTAACTTCTTCTAGTTCAAACAAAACTATTCAAATCAAATGGCTACTTTGAATCTCTCTTCTTCTTCTTCTTCCTCACCTCTCCTCTCTTGTCCACGGTAACTTCTCCTCTCTTTTCATGATCCACTGTTAATCTCATCAAACCATTTTCCCCATATATTTTTTAATGATCCACTTCTTTTCTCAATACAATACCTTTATCATATGATATGATACGTGGTTTTATCCATTGTTAGTTAACACACAGTTTATTTTCATATCACATATACTAATCATAACTTTTATCTATATTAACATGTATTACTGATACTTCTGATCTAAGACGTGTTTGACATGTCAATTGTTTGTCATGAACCGACACATGTGATTACATTCAATTATGTTATTTTTCAAACAGTTAACTTGCTGAAATCTGTTATGTTTTGAACTGGATTTCTTAGCTGAGTAGCTTCTCGTTGCAGTTTTAAATTTTGGAATTTTCTGTCACTCTTTTAAGGTAGTTAACCTTTGATTTGATCTGTTTTTCAATGTAGGCCATCCAATCACTTCAAATTATTCAATGATTTCCCTATTGTTAAAGTGAATTATAAATCTCCCTCAACTCACAATGCTGCTTTTAGAGTTAAATCTGCATTGACATCTGGAGGGGGTGACCTACTTTCCTATCCGAAAAACACCAATGAGATTATCATTGGCAAAGATCTCGTTGTTGGTGCCGAATCTATTCTAATTAAGGAACAGTCTAATGGAACACCGGCATCAGACTCAGGGATACCAAGCACTTTTTTCTCTGCGGACTACAATGACTATGATTTGGACATCCCTGCAGAAGGTTTTTCTTCTATCCCTGAGGCCATTGAAGACATTCGTCAAGGAAAGGTTGTGAAATAGTAGTTTCTTTGTTTTTTTTCTATTTTGTTGTAGCGTTATAAGTTTTTTTTTGTTTTTTTGCCAAGATCATGATAGATTTTGTTTATTAATCATGCAGATGGTAGTGGTTGTAGACGATGAAGATAGAGAAAACGAAGGAGACTTGATAATGGCAGCAGAATTGGCAACGCCCGAAGCTATGGCTTTTATAGTAAAGCATGGAACTGGCATAGTTTGTGTAAGTATGAATGAAGAAGATCTTGATAGATTGGAGCTTCCTTTGATGGTGGACAGTAAGGCTAATGCTGATAAACTTCGTACCGCATTCACTGTGACCGTGGTATGTATTACTATTCGTAATTGCATCTATACACATCTGGACTTATTACCATATCTCTTTGACTAAGGAAATGTTGTTAAATGGCGGCTATAGCGAAATTTGAATAAGTCGCTATTGTCTGCAATATGCTATTAAGTAGAAAATGTTGTCAATAAGAGGTGCTTAGTGAAGCTATAGCACTGTTGTGTAAAAAAAGATCGAATAAACTGCTATTTTCCGCAATCGCGCAATCGACAACATTGGACTAAGGTCTTTCACTGTTGCTGCACTTGTATGATGTATTTAATTTGTTGAAATTAAATGGTTTTCAAATCAAGGATACTATTGAAATTTAATCTGTTATGCTATTGAAGGAATTCTGGTTTGAACGGGGTTAGGCATTTATTGATGGAATCTGATACATTTCAACTATTTAAAATGTATTTGTAGGATGCTAAACATGGTACCACCACAGGGGTGTCAGCTCAAGATAGGGCAACTACAGTATTGGCCCTTGCATCTAGAGATTCAACTCCGGCTGATTTCAACCGACCAGGCCATATTTTCCCACTAAAATACAGGGATGGTGGTGTCTTGAAGAGAGCTGGACATACAGAAGCTTCAGCTGATCTTACCATACTTGCTGGTTTGGAGCCAGTGGCAGTTCTGTGTGAGATTGTAGATGATGACGGTTCCATGGCTAGATTACCTAAGCTCCGCGAATTTGCCAAGCGTGAGAATTTGAAAATTGTATCTATCGCTGACTTGATAAGGTATGGTTGTTACTTTTCATGTAAGATGTAATAAAATTCTTATTATTTGCATATTTATGGTGTCTTTTATGTTTATATTTTGCTTTCAAACACAGATAGCATGATTTATATCCAACATACTAAATGAGTTGATATCTCACAATATATATGGCCTTGAATCGTGACTAAATGATTGAACTAACTCGGACTTTATGGTTCTTAATTTTGTCTGATGAGGATATTATTAGTCAAATATAATAATTTCAATTGATGTTTCTTTGATTTAAATTCGTTTATTTTTGTTAAAACCTCACTGAATGGAATTTTTATATTTTCTGGAGAATGATTTTTTTTTTTTAAAAAAAAAAACTCCTATTCAATGGTTCTCATAGAAAATGGGGAGATAGAGAGAAAGATGTTAACTTTAGGATCCAAATAGGGTGGATAAAATGAAGGAACACTTTTGGTGTGCTTTACTATAGTAATGTATCACTCAGGCTTAGAAGGAAAACTTAATCACACAACTGAAAGACCTACAGTGTTGTATGAGACTGTATGTTGGATAGCAGAGAACCAACAAAATAGTAAGTTCAGTATTCCAGAGATGAGGTGAGAACGTTACATTGAATGAGTTGTCACACAAGACAAGACATAATCAGGAATCAAGTCATTAGAGCGAAAATTGGGGTAGCTCCCACTGTAGGAAAATGGTAGAGTCCTGGCTTATGTGGTTTAAGTACGAGTGAAGAACATTCATAGAAGCACTGACTAGGAAGGTAGACCAGATACAGGGTAGTCAAATTCATTGTTGTGTTCTTTATGTGATTTTGTGTTCTGTATAAGTCTCGTTTTTCAAGGTTTTTGCTGTCTGGGATACTTCTTGTTGCTTATTTGGTCATAACAAGGAGATTAAAACTTATTGGTATTGCAGATATAGAAGAAAGAGAGATCAATTAGTGGAACGTTCTTCTGCAGCAAGAATACCTACAATGTGGGGGCCATTCACATCATACTGTTATAAGTCTCTGTTAGACGGGATTGAGCATATTGCAATGGTTAAGGTGAGCATTTCTTGTGTATATAATACAGTTTCCGTGGAACTACCTATATTTTGCAACACTTAGCGATGGGTTTTTGACAAGGTTTTGACTATTTGTAATTTGACAGGGTGACATTGGAGATGGAGAAGATGTTCTTGTGAGGGTACACTCAGAGTGTCTAACTGGAGACATATTTGGATCTGCCAGATGTGACTGTGGAAATCAGCTTGCACTTGCAATGGAACAGATTGAGGCTGCCGGTAGGGGAGTACTTGTATATCTACGCGGACATGAAGGAAGGGGTATTGGATTGGGCCACAAGCTCCGTGCTTATAACTTACAGGATGATGGACGTGATACCGTAGAAGCCAATGAGGAGTTGGGATTGCCTGTTGACTCTAGGGAATATGGCATAGGCGCACAGGTAATATATTAGAATTGCTCAATGGTTCCATAAAGGATTTTTTACAATAACATTTTGAGAGGTTCTATGTTTGTTTTGACGCAGCAAGATACTATTAAAGTCAATATGTAGATCTTTCATTGCTTTTGAATTTTGATGCATGTTTATTAAAGAGATATTTTGGCCGAATGACTAAATTGACATTGTTCAATTAAATGGACTAAATTGTATTTTGCAAATTTTAGAGCCTCAGACCGACCCTTACAGTTTCAATGACTGAAATGCTCATTTACTCTTAATATTTATGCTCAGCATATAATTTTAACTGTTTAAATACATGGTGATCACTGTTGTTATGGAAAGTTATCACAGACATGGCTTAAACCTTGGAATGTTACTACTTTTTCAGATACTGAGGGATCTAGGCGTTAAATCTATGAAGTTGATGACAAACAATCCAACAAAATATGTTGGCCTCAAAGGCTATGGTTTGACTGTTTCTGGTAGGATCCCGTTGTTAACTCTTATCACGTCCGAGAACAAGAGATACTTAGAGACCAAACGTGTGAAAATGGGCCACGTCTATGGCACGGAACTTAACAACGGCAATGGTAAAACCAATACTGTTGAAGAATCAAATGTTGTTGCTGGCTTTTGA
Protein sequence

>MS.gene01192.t1

MHGKRNAWVVGGGKGISRSLNYKSPSTHNAAFRVKSALTSGGGDLLSYPKNTNEIIIGKDLVVGAESILIKEQSNGTPASDSGIPSTFFSADYNDYDLDIPAEGFSSIPEAIEDIRQGKMVVVVDDEDRENEGDLIMAAELATPEAMAFIVKHGTGIVCVSMNEEDLDRLELPLMVDSKANADKLRTAFTVTVDAKHGTTTGVSAQDRATTVLALASRDSTPADFNRPGHIFPLKYRDGGVLKRAGHTEASADLTILAGLEPVAVLCEIVDDDGSMARLPKLREFAKRENLKIVSIADLIRYRRKRDQLVERSSAARIPTMWGPFTSYCYKSLLDGIEHIAMVKGDIGDGEDVLVRVHSECLTGDIFGSARCDCGNQLALAMEQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQILRDLGVKSMKLMTNNPTKYVGLKGYGLTVSGRIPLLTLITSENKRYLETKRVKMGHVYGTELNNGNGKTNTVEESNVVAGF