Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31178.t1 | XP_003597321.2 | 94.1 | 508 | 29 | 1 | 1 | 508 | 1 | 507 | 4.50E-271 | 943.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31178.t1 | Q9FN89 | 68.6 | 513 | 143 | 6 | 1 | 507 | 2 | 502 | 1.9e-193 | 676.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31178.t1 | G7IHK9 | 94.1 | 508 | 29 | 1 | 1 | 508 | 1 | 507 | 3.3e-271 | 943.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene31178 | 0.842996 | 1.84E-58 | -1.69E-46 |
| MS.gene049222 | MS.gene31178 | 0.813879 | 2.05E-51 | -1.69E-46 |
| MS.gene049356 | MS.gene31178 | 0.851116 | 1.09E-60 | -1.69E-46 |
| MS.gene049369 | MS.gene31178 | 0.847485 | 1.12E-59 | -1.69E-46 |
| MS.gene049396 | MS.gene31178 | 0.840386 | 8.97E-58 | -1.69E-46 |
| MS.gene049488 | MS.gene31178 | 0.839086 | 1.96E-57 | -1.69E-46 |
| MS.gene049609 | MS.gene31178 | 0.834524 | 2.85E-56 | -1.69E-46 |
| MS.gene049805 | MS.gene31178 | 0.859114 | 5.18E-63 | -1.69E-46 |
| MS.gene050593 | MS.gene31178 | 0.820367 | 7.12E-53 | -1.69E-46 |
| MS.gene050670 | MS.gene31178 | 0.852534 | 4.33E-61 | -1.69E-46 |
| MS.gene050747 | MS.gene31178 | 0.860102 | 2.61E-63 | -1.69E-46 |
| MS.gene050772 | MS.gene31178 | 0.824885 | 6.33E-54 | -1.69E-46 |
| MS.gene050950 | MS.gene31178 | 0.844891 | 5.71E-59 | -1.69E-46 |
| MS.gene05105 | MS.gene31178 | 0.822449 | 2.35E-53 | -1.69E-46 |
| MS.gene051167 | MS.gene31178 | -0.801048 | 1.08E-48 | -1.69E-46 |
| MS.gene051387 | MS.gene31178 | 0.837897 | 3.96E-57 | -1.69E-46 |
| MS.gene051438 | MS.gene31178 | 0.839771 | 1.30E-57 | -1.69E-46 |
| MS.gene051666 | MS.gene31178 | 0.83219 | 1.09E-55 | -1.69E-46 |
| MS.gene051838 | MS.gene31178 | 0.83572 | 1.42E-56 | -1.69E-46 |
| MS.gene051874 | MS.gene31178 | 0.811179 | 7.97E-51 | -1.69E-46 |
| MS.gene051941 | MS.gene31178 | 0.810643 | 1.04E-50 | -1.69E-46 |
| MS.gene052136 | MS.gene31178 | 0.809931 | 1.48E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene31178 | 0.822184 | 2.71E-53 | -1.69E-46 |
| MS.gene052188 | MS.gene31178 | 0.806043 | 9.96E-50 | -1.69E-46 |
| MS.gene052253 | MS.gene31178 | 0.805595 | 1.24E-49 | -1.69E-46 |
| MS.gene052346 | MS.gene31178 | 0.817235 | 3.66E-52 | -1.69E-46 |
| MS.gene052414 | MS.gene31178 | 0.876973 | 9.12E-69 | -1.69E-46 |
| MS.gene052421 | MS.gene31178 | 0.88272 | 8.22E-71 | -1.69E-46 |
| MS.gene052501 | MS.gene31178 | 0.846921 | 1.60E-59 | -1.69E-46 |
| MS.gene052503 | MS.gene31178 | 0.834082 | 3.68E-56 | -1.69E-46 |
| MS.gene052505 | MS.gene31178 | 0.853044 | 3.10E-61 | -1.69E-46 |
| MS.gene052615 | MS.gene31178 | 0.819089 | 1.39E-52 | -1.69E-46 |
| MS.gene052823 | MS.gene31178 | 0.834124 | 3.59E-56 | -1.69E-46 |
| MS.gene052825 | MS.gene31178 | 0.827325 | 1.67E-54 | -1.69E-46 |
| MS.gene052982 | MS.gene31178 | 0.824866 | 6.40E-54 | -1.69E-46 |
| MS.gene053213 | MS.gene31178 | 0.80445 | 2.15E-49 | -1.69E-46 |
| MS.gene053436 | MS.gene31178 | 0.837083 | 6.41E-57 | -1.69E-46 |
| MS.gene053449 | MS.gene31178 | 0.804738 | 1.87E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene31178 | 0.847258 | 1.30E-59 | -1.69E-46 |
| MS.gene053579 | MS.gene31178 | 0.800638 | 1.31E-48 | -1.69E-46 |
| MS.gene053626 | MS.gene31178 | 0.854706 | 1.03E-61 | -1.69E-46 |
| MS.gene053632 | MS.gene31178 | 0.82907 | 6.32E-55 | -1.69E-46 |
| MS.gene053758 | MS.gene31178 | 0.815565 | 8.66E-52 | -1.69E-46 |
| MS.gene053873 | MS.gene31178 | 0.842226 | 2.94E-58 | -1.69E-46 |
| MS.gene053912 | MS.gene31178 | 0.87535 | 3.30E-68 | -1.69E-46 |
| MS.gene053916 | MS.gene31178 | 0.839296 | 1.73E-57 | -1.69E-46 |
| MS.gene054123 | MS.gene31178 | 0.809257 | 2.07E-50 | -1.69E-46 |
| MS.gene054408 | MS.gene31178 | 0.808682 | 2.75E-50 | -1.69E-46 |
| MS.gene054486 | MS.gene31178 | 0.812181 | 4.82E-51 | -1.69E-46 |
| MS.gene054742 | MS.gene31178 | -0.813667 | 2.28E-51 | -1.69E-46 |
| MS.gene054927 | MS.gene31178 | 0.823744 | 1.17E-53 | -1.69E-46 |
| MS.gene05494 | MS.gene31178 | 0.805161 | 1.53E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene31178 | 0.872831 | 2.35E-67 | -1.69E-46 |
| MS.gene055116 | MS.gene31178 | 0.808015 | 3.81E-50 | -1.69E-46 |
| MS.gene055289 | MS.gene31178 | 0.800307 | 1.53E-48 | -1.69E-46 |
| MS.gene055369 | MS.gene31178 | 0.825216 | 5.29E-54 | -1.69E-46 |
| MS.gene055486 | MS.gene31178 | 0.837687 | 4.49E-57 | -1.69E-46 |
| MS.gene055539 | MS.gene31178 | 0.817937 | 2.54E-52 | -1.69E-46 |
| MS.gene055741 | MS.gene31178 | 0.84847 | 6.00E-60 | -1.69E-46 |
| MS.gene055744 | MS.gene31178 | 0.84913 | 3.94E-60 | -1.69E-46 |
| MS.gene055909 | MS.gene31178 | 0.883979 | 2.84E-71 | -1.69E-46 |
| MS.gene055911 | MS.gene31178 | 0.881794 | 1.79E-70 | -1.69E-46 |
| MS.gene055941 | MS.gene31178 | 0.801717 | 7.89E-49 | -1.69E-46 |
| MS.gene056040 | MS.gene31178 | 0.802003 | 6.89E-49 | -1.69E-46 |
| MS.gene056166 | MS.gene31178 | 0.839817 | 1.26E-57 | -1.69E-46 |
| MS.gene056422 | MS.gene31178 | 0.802962 | 4.37E-49 | -1.69E-46 |
| MS.gene056487 | MS.gene31178 | 0.822007 | 2.98E-53 | -1.69E-46 |
| MS.gene056511 | MS.gene31178 | 0.868462 | 6.41E-66 | -1.69E-46 |
| MS.gene056514 | MS.gene31178 | 0.861909 | 7.36E-64 | -1.69E-46 |
| MS.gene05664 | MS.gene31178 | 0.870314 | 1.60E-66 | -1.69E-46 |
| MS.gene05666 | MS.gene31178 | 0.868789 | 5.03E-66 | -1.69E-46 |
| MS.gene057019 | MS.gene31178 | 0.823187 | 1.58E-53 | -1.69E-46 |
| MS.gene057048 | MS.gene31178 | 0.80062 | 1.32E-48 | -1.69E-46 |
| MS.gene057076 | MS.gene31178 | 0.833312 | 5.73E-56 | -1.69E-46 |
| MS.gene057086 | MS.gene31178 | 0.819326 | 1.23E-52 | -1.69E-46 |
| MS.gene057124 | MS.gene31178 | 0.839332 | 1.69E-57 | -1.69E-46 |
| MS.gene057356 | MS.gene31178 | -0.806849 | 6.74E-50 | -1.69E-46 |
| MS.gene057416 | MS.gene31178 | 0.823284 | 1.50E-53 | -1.69E-46 |
| MS.gene057734 | MS.gene31178 | 0.891337 | 4.36E-74 | -1.69E-46 |
| MS.gene057749 | MS.gene31178 | 0.81819 | 2.23E-52 | -1.69E-46 |
| MS.gene057823 | MS.gene31178 | 0.835429 | 1.69E-56 | -1.69E-46 |
| MS.gene057825 | MS.gene31178 | 0.80366 | 3.14E-49 | -1.69E-46 |
| MS.gene057856 | MS.gene31178 | 0.836997 | 6.74E-57 | -1.69E-46 |
| MS.gene05787 | MS.gene31178 | 0.822941 | 1.81E-53 | -1.69E-46 |
| MS.gene058007 | MS.gene31178 | 0.854772 | 9.85E-62 | -1.69E-46 |
| MS.gene058019 | MS.gene31178 | 0.817576 | 3.07E-52 | -1.69E-46 |
| MS.gene058075 | MS.gene31178 | 0.843645 | 1.23E-58 | -1.69E-46 |
| MS.gene058090 | MS.gene31178 | 0.836633 | 8.35E-57 | -1.69E-46 |
| MS.gene058120 | MS.gene31178 | 0.848651 | 5.35E-60 | -1.69E-46 |
| MS.gene058130 | MS.gene31178 | 0.81593 | 7.18E-52 | -1.69E-46 |
| MS.gene058376 | MS.gene31178 | 0.824483 | 7.88E-54 | -1.69E-46 |
| MS.gene058700 | MS.gene31178 | 0.819633 | 1.05E-52 | -1.69E-46 |
| MS.gene058838 | MS.gene31178 | 0.819588 | 1.07E-52 | -1.69E-46 |
| MS.gene058928 | MS.gene31178 | 0.824645 | 7.22E-54 | -1.69E-46 |
| MS.gene058948 | MS.gene31178 | 0.846495 | 2.10E-59 | -1.69E-46 |
| MS.gene05934 | MS.gene31178 | 0.801185 | 1.01E-48 | -1.69E-46 |
| MS.gene059367 | MS.gene31178 | 0.821664 | 3.58E-53 | -1.69E-46 |
| MS.gene059368 | MS.gene31178 | 0.842845 | 2.02E-58 | -1.69E-46 |
| MS.gene059420 | MS.gene31178 | 0.810147 | 1.33E-50 | -1.69E-46 |
| MS.gene059455 | MS.gene31178 | 0.832906 | 7.24E-56 | -1.69E-46 |
| MS.gene059667 | MS.gene31178 | 0.823412 | 1.40E-53 | -1.69E-46 |
| MS.gene059674 | MS.gene31178 | 0.838359 | 3.01E-57 | -1.69E-46 |
| MS.gene059688 | MS.gene31178 | 0.811654 | 6.28E-51 | -1.69E-46 |
| MS.gene059711 | MS.gene31178 | 0.804484 | 2.11E-49 | -1.69E-46 |
| MS.gene059718 | MS.gene31178 | 0.806275 | 8.90E-50 | -1.69E-46 |
| MS.gene059807 | MS.gene31178 | 0.831198 | 1.91E-55 | -1.69E-46 |
| MS.gene059870 | MS.gene31178 | 0.861946 | 7.18E-64 | -1.69E-46 |
| MS.gene060372 | MS.gene31178 | 0.855751 | 5.11E-62 | -1.69E-46 |
| MS.gene060403 | MS.gene31178 | 0.821355 | 4.22E-53 | -1.69E-46 |
| MS.gene060835 | MS.gene31178 | 0.849842 | 2.49E-60 | -1.69E-46 |
| MS.gene060837 | MS.gene31178 | 0.833787 | 4.36E-56 | -1.69E-46 |
| MS.gene06097 | MS.gene31178 | 0.847431 | 1.16E-59 | -1.69E-46 |
| MS.gene061041 | MS.gene31178 | 0.838195 | 3.32E-57 | -1.69E-46 |
| MS.gene061154 | MS.gene31178 | 0.80852 | 2.98E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene028458 | MS.gene31178 | PPI |
| MS.gene02178 | MS.gene31178 | PPI |
| MS.gene068045 | MS.gene31178 | PPI |
| MS.gene90199 | MS.gene31178 | PPI |
| MS.gene071898 | MS.gene31178 | PPI |
| MS.gene01192 | MS.gene31178 | PPI |
| MS.gene053559 | MS.gene31178 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31178.t1 | MTR_2g096330 | 96.457 | 508 | 17 | 1 | 1 | 508 | 1 | 507 | 0.0 | 1008 |
| MS.gene31178.t1 | MTR_2g009270 | 65.877 | 422 | 142 | 2 | 88 | 508 | 102 | 522 | 0.0 | 577 |
| MS.gene31178.t1 | MTR_4g094130 | 66.832 | 404 | 133 | 1 | 102 | 505 | 110 | 512 | 0.0 | 572 |
| MS.gene31178.t1 | MTR_4g094130 | 68.052 | 385 | 122 | 1 | 121 | 505 | 1 | 384 | 0.0 | 554 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31178.t1 | AT5G59750 | 69.201 | 513 | 140 | 6 | 1 | 507 | 2 | 502 | 0.0 | 710 |
| MS.gene31178.t1 | AT5G59750 | 64.899 | 547 | 140 | 7 | 1 | 507 | 2 | 536 | 0.0 | 693 |
| MS.gene31178.t1 | AT5G59750 | 66.594 | 458 | 135 | 6 | 1 | 452 | 2 | 447 | 0.0 | 601 |
| MS.gene31178.t1 | AT5G64300 | 67.067 | 416 | 136 | 1 | 90 | 505 | 112 | 526 | 0.0 | 588 |
| MS.gene31178.t1 | AT2G22450 | 58.418 | 392 | 154 | 3 | 92 | 483 | 92 | 474 | 2.64e-159 | 461 |
Find 116 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAAATTTGTTGGTCTAAA+AGG | 0.157959 | 2.4:-6927054 | MS.gene31178:CDS |
| TGTTTAACTGGGGATATATT+TGG | 0.172347 | 2.4:-6927913 | MS.gene31178:CDS |
| TGTCACATCTTCCTACTAAA+TGG | 0.198867 | 2.4:-6928175 | MS.gene31178:CDS |
| TTCCTTGGCGTAATGCATTA+AGG | 0.202150 | 2.4:+6929356 | None:intergenic |
| TATTGTTAGGATGCAAAATA+TGG | 0.229542 | 2.4:-6928757 | MS.gene31178:intron |
| ACCAAAATGGGTCATATCTA+TGG | 0.241057 | 2.4:-6926949 | MS.gene31178:CDS |
| ACCTTGATCTTGCAAATTAT+AGG | 0.252533 | 2.4:+6927759 | None:intergenic |
| GAACAACAAGGTGAGAAATT+TGG | 0.257120 | 2.4:-6929587 | MS.gene31178:CDS |
| CCCATAGATATGACCCATTT+TGG | 0.264968 | 2.4:+6926948 | None:intergenic |
| TACTGAGGCTTCTGTAGATT+TGG | 0.288351 | 2.4:-6928587 | MS.gene31178:CDS |
| GTCCAAGCAAACATAGATTT+GGG | 0.316048 | 2.4:-6927727 | MS.gene31178:CDS |
| AGTCCAAGCAAACATAGATT+TGG | 0.316830 | 2.4:-6927728 | MS.gene31178:CDS |
| GTACATTCAGAATGTTTAAC+TGG | 0.320458 | 2.4:-6927925 | MS.gene31178:CDS |
| TTTGTTGGTCTAAAAGGATA+TGG | 0.325230 | 2.4:-6927048 | MS.gene31178:CDS |
| ATCTATGGGTCTGATATATA+AGG | 0.326183 | 2.4:-6926934 | None:intergenic |
| CGCTTGTTTGCTTCAGTGAT+TGG | 0.328210 | 2.4:+6926991 | None:intergenic |
| CCACCATTTCTATACTTAAG+AGG | 0.347032 | 2.4:+6928631 | None:intergenic |
| ATAAAATATGTACCTTGAAT+TGG | 0.360216 | 2.4:+6929739 | None:intergenic |
| TCCTTGGCGTAATGCATTAA+GGG | 0.365334 | 2.4:+6929357 | None:intergenic |
| TGATGTTGAAGATGGAAATA+TGG | 0.367048 | 2.4:-6928518 | MS.gene31178:CDS |
| TCGGAGAAAACGAGAGAAAT+TGG | 0.372980 | 2.4:-6928213 | MS.gene31178:CDS |
| TACTCTTTAGAGGGACAATC+TGG | 0.376592 | 2.4:+6929397 | None:intergenic |
| TTCTGTAGATTTGGTTGCAT+TGG | 0.388739 | 2.4:-6928578 | MS.gene31178:CDS |
| GTAGATTTGGTTGCATTGGC+AGG | 0.388977 | 2.4:-6928574 | MS.gene31178:CDS |
| GTCACATCTTCCTACTAAAT+GGG | 0.389348 | 2.4:-6928174 | MS.gene31178:CDS |
| AAATCAGTTATTGAAACAAT+TGG | 0.389681 | 2.4:+6928451 | None:intergenic |
| ACTCATCATAGTGTAAGATT+TGG | 0.392279 | 2.4:-6929616 | MS.gene31178:CDS |
| TCATAGCCAAATCTAGTTGC+TGG | 0.393601 | 2.4:+6927869 | None:intergenic |
| TTTCAATAACTGATTTGATA+AGG | 0.394612 | 2.4:-6928444 | MS.gene31178:intron |
| AATGGAAGAGTACTCTTTAG+AGG | 0.398749 | 2.4:+6929387 | None:intergenic |
| AGAGCTGTGAGAACAGAAAA+TGG | 0.400675 | 2.4:+6928544 | None:intergenic |
| AACAATCCAGCAAAATTTGT+TGG | 0.402087 | 2.4:-6927063 | MS.gene31178:CDS |
| TTTCCTCTTAAGTATAGAAA+TGG | 0.404838 | 2.4:-6928634 | MS.gene31178:CDS |
| AATTCTAGCTAACCTTTCCT+TGG | 0.419158 | 2.4:+6929341 | None:intergenic |
| AAGTCCTCGGATTTCGACTC+TGG | 0.423258 | 2.4:+6928676 | None:intergenic |
| CTGTGGCCAGCAACTAGATT+TGG | 0.426292 | 2.4:-6927875 | MS.gene31178:CDS |
| TGAAATAGACCCCATTTAGT+AGG | 0.431751 | 2.4:+6928164 | None:intergenic |
| GAAGGAAGAGGCATTGGGTT+AGG | 0.438985 | 2.4:-6927796 | MS.gene31178:CDS |
| TTCTCACCTTGTTGTTCCAC+AGG | 0.446496 | 2.4:+6929593 | None:intergenic |
| ACCCCAAATCTATGTTTGCT+TGG | 0.446947 | 2.4:+6927725 | None:intergenic |
| GAATCCTCTTCTTCAGTGTC+AGG | 0.447824 | 2.4:+6928897 | None:intergenic |
| TGTTGAAGGGAATCTTATAA+AGG | 0.455110 | 2.4:-6929036 | MS.gene31178:CDS |
| TTTATGATTAAACATGGATC+AGG | 0.455192 | 2.4:-6928981 | MS.gene31178:CDS |
| AGCGTTACCTAGAAACAAAA+AGG | 0.456329 | 2.4:-6926972 | MS.gene31178:CDS |
| GCTGTTGATGCTCGTGAGTA+TGG | 0.457469 | 2.4:-6927700 | MS.gene31178:CDS |
| ATGAAATTGATTGAAGAAGC+TGG | 0.460792 | 2.4:-6927850 | MS.gene31178:CDS |
| TGCATTAAGGGCATGCTCAA+TGG | 0.463896 | 2.4:+6929369 | None:intergenic |
| GATGAAAACAACAATGTTGA+AGG | 0.466495 | 2.4:-6929050 | MS.gene31178:CDS |
| GGTCATGAAGGAAGAGGCAT+TGG | 0.482864 | 2.4:-6927802 | MS.gene31178:CDS |
| TTGGTTGCTTAGGGAAACAT+AGG | 0.482975 | 2.4:-6927973 | MS.gene31178:intron |
| AATCATAAATGCCACATCCT+TGG | 0.486532 | 2.4:+6928995 | None:intergenic |
| GCCTATAATTTGCAAGATCA+AGG | 0.487252 | 2.4:-6927760 | MS.gene31178:CDS |
| CCACTGTGATAGTGAAAGTA+GGG | 0.490607 | 2.4:+6928868 | None:intergenic |
| GGAGTAATTGTGTATCTTAG+AGG | 0.493061 | 2.4:-6927823 | MS.gene31178:CDS |
| ATAGAAATGGTGGAGTGCTT+AGG | 0.494926 | 2.4:-6928621 | MS.gene31178:CDS |
| CCCACGTCATCACCAATTCA+AGG | 0.497388 | 2.4:-6929751 | MS.gene31178:intron |
| TGAGTATGGCATTGGTGCCC+AGG | 0.497742 | 2.4:-6927686 | MS.gene31178:intron |
| ACGTGGGAAATCAAAGGACT+AGG | 0.503550 | 2.4:+6929767 | None:intergenic |
| GCTCTTGTTGATGTTGAAGA+TGG | 0.508607 | 2.4:-6928526 | MS.gene31178:CDS |
| TTGATTGAAGAAGCTGGAAG+AGG | 0.514495 | 2.4:-6927844 | MS.gene31178:CDS |
| TGGAACTTCCACGGGTGTAT+CGG | 0.515831 | 2.4:-6928737 | MS.gene31178:CDS |
| CCTCTTAAGTATAGAAATGG+TGG | 0.517951 | 2.4:-6928631 | MS.gene31178:CDS |
| GGTGGAGTGCTTAGGAGAGC+TGG | 0.520674 | 2.4:-6928613 | MS.gene31178:CDS |
| TGTTATAGTTCAAAGTTGGA+TGG | 0.520999 | 2.4:-6928134 | MS.gene31178:CDS |
| GCTTAGGGAAACATAGGAGA+TGG | 0.523904 | 2.4:-6927967 | MS.gene31178:intron |
| ATATTGTTATAGTTCAAAGT+TGG | 0.524855 | 2.4:-6928138 | MS.gene31178:CDS |
| GGGAATGAAGCAGAGTCCAT+AGG | 0.530818 | 2.4:+6929788 | None:intergenic |
| GGATATGGTTTAGCTGTGAC+AGG | 0.532359 | 2.4:-6927033 | MS.gene31178:CDS |
| GCAAAATATGGAACTTCCAC+GGG | 0.535098 | 2.4:-6928745 | MS.gene31178:CDS |
| ACATTGGAGTTCGAACTATG+AGG | 0.535750 | 2.4:-6927095 | MS.gene31178:CDS |
| GTCACCTGACACTGAAGAAG+AGG | 0.544346 | 2.4:-6928901 | MS.gene31178:CDS |
| CCAAAATGGGTCATATCTAT+GGG | 0.544969 | 2.4:-6926948 | MS.gene31178:CDS |
| TATTTATTCAAAGCTTGCAT+CGG | 0.545583 | 2.4:-6929648 | MS.gene31178:intron |
| GGATCAGGAATAGTTTCTGT+TGG | 0.545719 | 2.4:-6928966 | MS.gene31178:CDS |
| TCAGTGATTGGTGTTAGCAC+AGG | 0.547814 | 2.4:+6927003 | None:intergenic |
| TGAGCATGTGGCTGTTGTAA+AGG | 0.560783 | 2.4:-6928108 | MS.gene31178:intron |
| CTTAGAGGTCATGAAGGAAG+AGG | 0.564446 | 2.4:-6927808 | MS.gene31178:CDS |
| CGTGGGAAATCAAAGGACTA+GGG | 0.566760 | 2.4:+6929768 | None:intergenic |
| TCTTGTTAGTACCAAGGATG+TGG | 0.568018 | 2.4:-6929006 | MS.gene31178:CDS |
| TGCAAAATATGGAACTTCCA+CGG | 0.569828 | 2.4:-6928746 | MS.gene31178:CDS |
| TAATGCATTACGCCAAGGAA+AGG | 0.571418 | 2.4:-6929353 | MS.gene31178:intron |
| TTCTGTTGGCATGAAAGAAG+AGG | 0.576477 | 2.4:-6928952 | MS.gene31178:CDS |
| GCCACTGTGATAGTGAAAGT+AGG | 0.578231 | 2.4:+6928867 | None:intergenic |
| TTCCACGGGTGTATCGGCTG+CGG | 0.588754 | 2.4:-6928731 | MS.gene31178:CDS |
| GTCATGAAGGAAGAGGCATT+GGG | 0.591268 | 2.4:-6927801 | MS.gene31178:CDS |
| TTCTTTGTAAGTGAAGCTGA+AGG | 0.595370 | 2.4:-6929424 | MS.gene31178:CDS |
| ATGAAAACAACAATGTTGAA+GGG | 0.595372 | 2.4:-6929049 | MS.gene31178:CDS |
| TCAGTGTCAGGTGACATAAG+AGG | 0.596959 | 2.4:+6928909 | None:intergenic |
| TACATTCAGAATGTTTAACT+GGG | 0.597083 | 2.4:-6927924 | MS.gene31178:CDS |
| CTTAGGGAAACATAGGAGAT+GGG | 0.597548 | 2.4:-6927966 | MS.gene31178:intron |
| ATGGAAGAGTACTCTTTAGA+GGG | 0.599636 | 2.4:+6929388 | None:intergenic |
| GCCCTTAATGCATTACGCCA+AGG | 0.607779 | 2.4:-6929358 | MS.gene31178:CDS |
| GATGCTCGTGAGTATGGCAT+TGG | 0.608440 | 2.4:-6927694 | MS.gene31178:CDS |
| GTGTATCTTAGAGGTCATGA+AGG | 0.608731 | 2.4:-6927814 | MS.gene31178:CDS |
| GGGATATATTTGGATCAGCT+CGG | 0.611108 | 2.4:-6927903 | MS.gene31178:CDS |
| GTGGCATTTATGATTAAACA+TGG | 0.613664 | 2.4:-6928987 | MS.gene31178:CDS |
| TCCGAGGACTTAAGAAAACC+AGG | 0.619694 | 2.4:-6928664 | MS.gene31178:CDS |
| ATCCGCAGCCGATACACCCG+TGG | 0.629180 | 2.4:+6928729 | None:intergenic |
| ATTTGGCCTGTGGAACAACA+AGG | 0.634139 | 2.4:-6929599 | MS.gene31178:CDS |
| ATAGTGTAAGATTTGGCCTG+TGG | 0.635119 | 2.4:-6929609 | MS.gene31178:CDS |
| TCACATCTTCCTACTAAATG+GGG | 0.639715 | 2.4:-6928173 | MS.gene31178:CDS |
| AGCATCTCTTGTTAGTACCA+AGG | 0.640073 | 2.4:-6929012 | MS.gene31178:CDS |
| GAAGACGTGTTTGATGATAG+TGG | 0.645204 | 2.4:-6929529 | MS.gene31178:CDS |
| GTGATGACGTGGGAAATCAA+AGG | 0.652787 | 2.4:+6929761 | None:intergenic |
| ACCTTGAATTGGTGATGACG+TGG | 0.653143 | 2.4:+6929750 | None:intergenic |
| GGATCAGCTCGGTGTGACTG+TGG | 0.657027 | 2.4:-6927892 | MS.gene31178:CDS |
| TCCAAGCAAACATAGATTTG+GGG | 0.659816 | 2.4:-6927726 | MS.gene31178:CDS |
| CACTGTGATAGTGAAAGTAG+GGG | 0.669060 | 2.4:+6928869 | None:intergenic |
| TGTCAGGTGACATAAGAGGA+AGG | 0.670240 | 2.4:+6928913 | None:intergenic |
| ATCTCCAGAGTCGAAATCCG+AGG | 0.671355 | 2.4:-6928680 | MS.gene31178:CDS |
| TAGGAGAGCTGGTCATACTG+AGG | 0.694929 | 2.4:-6928602 | MS.gene31178:CDS |
| ACATTCAGAATGTTTAACTG+GGG | 0.696460 | 2.4:-6927923 | MS.gene31178:CDS |
| GTTGGATGGAACTGAGCATG+TGG | 0.707210 | 2.4:-6928120 | MS.gene31178:CDS |
| CCTTGAATTGGTGATGACGT+GGG | 0.735027 | 2.4:+6929751 | None:intergenic |
| GCTGTGAGAACAGAAAATGG+TGG | 0.741200 | 2.4:+6928547 | None:intergenic |
| CCCTACTTTCACTATCACAG+TGG | 0.750731 | 2.4:-6928868 | MS.gene31178:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCAAAAAAAATATTGATAT+AGG | + | chr2.4:6927632-6927651 | None:intergenic | 10.0% |
| !!! | GTTTTTGTTTTTTTAAAATT+CGG | + | chr2.4:6929177-6929196 | None:intergenic | 10.0% |
| !! | TCTGAATTATAATTTCTTAT+TGG | - | chr2.4:6928729-6928748 | MS.gene31178:CDS | 15.0% |
| !! | TTGTGTAATATATTATTGTT+AGG | - | chr2.4:6927951-6927970 | MS.gene31178:CDS | 15.0% |
| !! | AAATCAGTTATTGAAACAAT+TGG | + | chr2.4:6928273-6928292 | None:intergenic | 20.0% |
| !! | ATAAAATATGTACCTTGAAT+TGG | + | chr2.4:6926985-6927004 | None:intergenic | 20.0% |
| !! | ATATTGTTATAGTTCAAAGT+TGG | - | chr2.4:6928583-6928602 | MS.gene31178:CDS | 20.0% |
| !! | ATCTACTAATCAACATTTAT+TGG | + | chr2.4:6929355-6929374 | None:intergenic | 20.0% |
| !! | GAAATATTGCAAATTATACA+AGG | + | chr2.4:6929532-6929551 | None:intergenic | 20.0% |
| !! | GATTTGAAGAAAAATGAAAA+TGG | - | chr2.4:6927216-6927235 | MS.gene31178:intron | 20.0% |
| !!! | AATGCTAAGTTTTTTAAACT+GGG | + | chr2.4:6928237-6928256 | None:intergenic | 20.0% |
| !!! | GATGACATTTTATTAAGTAA+TGG | - | chr2.4:6927583-6927602 | MS.gene31178:intron | 20.0% |
| !!! | TGTAAAACATTTTTGAATGT+TGG | - | chr2.4:6929458-6929477 | MS.gene31178:CDS | 20.0% |
| !!! | TTTCAATAACTGATTTGATA+AGG | - | chr2.4:6928277-6928296 | MS.gene31178:intron | 20.0% |
| ! | AAACATATGTTCTCTTAATG+TGG | - | chr2.4:6928424-6928443 | MS.gene31178:intron | 25.0% |
| ! | ATGAAAACAACAATGTTGAA+GGG | - | chr2.4:6927672-6927691 | MS.gene31178:intron | 25.0% |
| ! | CAGTTTAAAAAACTTAGCAT+TGG | - | chr2.4:6928236-6928255 | MS.gene31178:intron | 25.0% |
| ! | GATTTGTATTCACTAATACT+AGG | + | chr2.4:6929505-6929524 | None:intergenic | 25.0% |
| ! | TAATGATCAACTAAAGTAGA+TGG | - | chr2.4:6929109-6929128 | MS.gene31178:intron | 25.0% |
| ! | TACATTCAGAATGTTTAACT+GGG | - | chr2.4:6928797-6928816 | MS.gene31178:intron | 25.0% |
| ! | TACTAATCAACATTTATTGG+TGG | + | chr2.4:6929352-6929371 | None:intergenic | 25.0% |
| ! | TATATGCAACAATCTACATT+AGG | + | chr2.4:6927908-6927927 | None:intergenic | 25.0% |
| ! | TATTGTTAAGCGAATTTGAT+TGG | + | chr2.4:6928463-6928482 | None:intergenic | 25.0% |
| ! | TATTGTTAGGATGCAAAATA+TGG | - | chr2.4:6927964-6927983 | MS.gene31178:CDS | 25.0% |
| ! | TATTTATTCAAAGCTTGCAT+CGG | - | chr2.4:6927073-6927092 | MS.gene31178:CDS | 25.0% |
| ! | TTTATGATTAAACATGGATC+AGG | - | chr2.4:6927740-6927759 | MS.gene31178:CDS | 25.0% |
| ! | TTTCCTCTTAAGTATAGAAA+TGG | - | chr2.4:6928087-6928106 | MS.gene31178:intron | 25.0% |
| !! | AATTTCTTATTGGTTGCTTA+GGG | - | chr2.4:6928739-6928758 | MS.gene31178:CDS | 25.0% |
| !! | TAATTTCTTATTGGTTGCTT+AGG | - | chr2.4:6928738-6928757 | MS.gene31178:CDS | 25.0% |
| !!! | AATTTGGCTTTTTATGCTAT+TGG | - | chr2.4:6927150-6927169 | MS.gene31178:intron | 25.0% |
| !!! | ATTTGGCTTTTTATGCTATT+GGG | - | chr2.4:6927151-6927170 | MS.gene31178:intron | 25.0% |
| !!! | CAACTTATAATAGCTTGTTT+TGG | + | chr2.4:6929578-6929597 | None:intergenic | 25.0% |
| !!! | CAATGCTAAGTTTTTTAAAC+TGG | + | chr2.4:6928238-6928257 | None:intergenic | 25.0% |
| !!! | GGTACATATTTTATTTCTCT+AGG | - | chr2.4:6926991-6927010 | MS.gene31178:CDS | 25.0% |
| !!! | TACTATTCTTTAGTTTGCTT+AGG | + | chr2.4:6928705-6928724 | None:intergenic | 25.0% |
| AACAATCCAGCAAAATTTGT+TGG | - | chr2.4:6929658-6929677 | MS.gene31178:intron | 30.0% | |
| ACATTCAGAATGTTTAACTG+GGG | - | chr2.4:6928798-6928817 | MS.gene31178:intron | 30.0% | |
| ACCTTGATCTTGCAAATTAT+AGG | + | chr2.4:6928965-6928984 | None:intergenic | 30.0% | |
| ACTAAAGTAGATGGTATGAT+TGG | - | chr2.4:6929118-6929137 | MS.gene31178:intron | 30.0% | |
| ACTCATCATAGTGTAAGATT+TGG | - | chr2.4:6927105-6927124 | MS.gene31178:CDS | 30.0% | |
| AGAAACAAAAAGGACCAAAA+TGG | - | chr2.4:6929759-6929778 | MS.gene31178:CDS | 30.0% | |
| AGTGATTAAAAGATCTAACC+TGG | + | chr2.4:6929056-6929075 | None:intergenic | 30.0% | |
| ATGAAATTGATTGAAGAAGC+TGG | - | chr2.4:6928871-6928890 | MS.gene31178:CDS | 30.0% | |
| GAAACAAAAAGGACCAAAAT+GGG | - | chr2.4:6929760-6929779 | MS.gene31178:CDS | 30.0% | |
| GATGAAAACAACAATGTTGA+AGG | - | chr2.4:6927671-6927690 | MS.gene31178:intron | 30.0% | |
| GTACATTCAGAATGTTTAAC+TGG | - | chr2.4:6928796-6928815 | MS.gene31178:intron | 30.0% | |
| GTGATTAAAAGATCTAACCT+GGG | + | chr2.4:6929055-6929074 | None:intergenic | 30.0% | |
| GTGGCATTTATGATTAAACA+TGG | - | chr2.4:6927734-6927753 | MS.gene31178:CDS | 30.0% | |
| TGAACAATACTTATGCACTT+CGG | - | chr2.4:6929430-6929449 | MS.gene31178:CDS | 30.0% | |
| TGATGTTGAAGATGGAAATA+TGG | - | chr2.4:6928203-6928222 | MS.gene31178:CDS | 30.0% | |
| TGTTATAGTTCAAAGTTGGA+TGG | - | chr2.4:6928587-6928606 | MS.gene31178:CDS | 30.0% | |
| TGTTGAAGGGAATCTTATAA+AGG | - | chr2.4:6927685-6927704 | MS.gene31178:intron | 30.0% | |
| TGTTTAACTGGGGATATATT+TGG | - | chr2.4:6928808-6928827 | MS.gene31178:intron | 30.0% | |
| ! | GATAAATGTGCAGATTTTGA+GGG | - | chr2.4:6929603-6929622 | MS.gene31178:CDS | 30.0% |
| ! | GTGCATAAGTATTGTTCAAT+TGG | + | chr2.4:6929428-6929447 | None:intergenic | 30.0% |
| ! | TGATAAATGTGCAGATTTTG+AGG | - | chr2.4:6929602-6929621 | MS.gene31178:CDS | 30.0% |
| ! | TTATGCTATTGGGTTTTCTA+AGG | - | chr2.4:6927161-6927180 | MS.gene31178:intron | 30.0% |
| ! | TTTAGACCAACAAATTTTGC+TGG | + | chr2.4:6929667-6929686 | None:intergenic | 30.0% |
| ! | TTTGTTGGTCTAAAAGGATA+TGG | - | chr2.4:6929673-6929692 | MS.gene31178:intron | 30.0% |
| !! | GCAAAATTTGTTGGTCTAAA+AGG | - | chr2.4:6929667-6929686 | MS.gene31178:intron | 30.0% |
| !! | TTTTGGTCCTTTTTGTTTCT+AGG | + | chr2.4:6929759-6929778 | None:intergenic | 30.0% |
| AACACGAGTTCAACAAATAG+AGG | + | chr2.4:6927041-6927060 | None:intergenic | 35.0% | |
| AATCATAAATGCCACATCCT+TGG | + | chr2.4:6927729-6927748 | None:intergenic | 35.0% | |
| ACCAAAATGGGTCATATCTA+TGG | - | chr2.4:6929772-6929791 | MS.gene31178:CDS | 35.0% | |
| AGATGGTATGATTGGACTTT+CGG | - | chr2.4:6929126-6929145 | MS.gene31178:intron | 35.0% | |
| AGCGTTACCTAGAAACAAAA+AGG | - | chr2.4:6929749-6929768 | MS.gene31178:intron | 35.0% | |
| AGTCCAAGCAAACATAGATT+TGG | - | chr2.4:6928993-6929012 | MS.gene31178:CDS | 35.0% | |
| CCAAAATGGGTCATATCTAT+GGG | - | chr2.4:6929773-6929792 | MS.gene31178:CDS | 35.0% | |
| CCACCATTTCTATACTTAAG+AGG | + | chr2.4:6928093-6928112 | None:intergenic | 35.0% | |
| CCTCTTAAGTATAGAAATGG+TGG | - | chr2.4:6928090-6928109 | MS.gene31178:intron | 35.0% | |
| CGTTACGTCTAATACATGTT+TGG | - | chr2.4:6927414-6927433 | MS.gene31178:intron | 35.0% | |
| GAACAACAAGGTGAGAAATT+TGG | - | chr2.4:6927134-6927153 | MS.gene31178:intron | 35.0% | |
| GGAGTAATTGTGTATCTTAG+AGG | - | chr2.4:6928898-6928917 | MS.gene31178:CDS | 35.0% | |
| GTCACATCTTCCTACTAAAT+GGG | - | chr2.4:6928547-6928566 | MS.gene31178:CDS | 35.0% | |
| GTCCAAGCAAACATAGATTT+GGG | - | chr2.4:6928994-6929013 | MS.gene31178:CDS | 35.0% | |
| TCACATCTTCCTACTAAATG+GGG | - | chr2.4:6928548-6928567 | MS.gene31178:CDS | 35.0% | |
| TCCAAGCAAACATAGATTTG+GGG | - | chr2.4:6928995-6929014 | MS.gene31178:CDS | 35.0% | |
| TGAAATAGACCCCATTTAGT+AGG | + | chr2.4:6928560-6928579 | None:intergenic | 35.0% | |
| TGCAAAATATGGAACTTCCA+CGG | - | chr2.4:6927975-6927994 | MS.gene31178:intron | 35.0% | |
| TGTCACATCTTCCTACTAAA+TGG | - | chr2.4:6928546-6928565 | MS.gene31178:CDS | 35.0% | |
| TTAAGAGGAAAAACATGACC+TGG | + | chr2.4:6928078-6928097 | None:intergenic | 35.0% | |
| TTAATGTATGTGACGCTTCA+AGG | - | chr2.4:6928483-6928502 | MS.gene31178:CDS | 35.0% | |
| TTCTTTGTAAGTGAAGCTGA+AGG | - | chr2.4:6927297-6927316 | MS.gene31178:intron | 35.0% | |
| ! | AATTCTAGCTAACCTTTCCT+TGG | + | chr2.4:6927383-6927402 | None:intergenic | 35.0% |
| ! | GCCTATAATTTGCAAGATCA+AGG | - | chr2.4:6928961-6928980 | MS.gene31178:CDS | 35.0% |
| ! | TTCTGTAGATTTGGTTGCAT+TGG | - | chr2.4:6928143-6928162 | MS.gene31178:CDS | 35.0% |
| !! | AATGGAAGAGTACTCTTTAG+AGG | + | chr2.4:6927337-6927356 | None:intergenic | 35.0% |
| !! | AGCGTCTAACGTTTTTAAGA+GGG | + | chr2.4:6927244-6927263 | None:intergenic | 35.0% |
| !! | ATGGAAGAGTACTCTTTAGA+GGG | + | chr2.4:6927336-6927355 | None:intergenic | 35.0% |
| !! | TAGCGTCTAACGTTTTTAAG+AGG | + | chr2.4:6927245-6927264 | None:intergenic | 35.0% |
| ACATTGGAGTTCGAACTATG+AGG | - | chr2.4:6929626-6929645 | MS.gene31178:CDS | 40.0% | |
| ACCCCAAATCTATGTTTGCT+TGG | + | chr2.4:6928999-6929018 | None:intergenic | 40.0% | |
| AGAGCTGTGAGAACAGAAAA+TGG | + | chr2.4:6928180-6928199 | None:intergenic | 40.0% | |
| AGCATCTCTTGTTAGTACCA+AGG | - | chr2.4:6927709-6927728 | MS.gene31178:CDS | 40.0% | |
| ATAGTGTAAGATTTGGCCTG+TGG | - | chr2.4:6927112-6927131 | MS.gene31178:intron | 40.0% | |
| CTTAGGGAAACATAGGAGAT+GGG | - | chr2.4:6928755-6928774 | MS.gene31178:intron | 40.0% | |
| GCAAAATATGGAACTTCCAC+GGG | - | chr2.4:6927976-6927995 | MS.gene31178:intron | 40.0% | |
| GCTCTTGTTGATGTTGAAGA+TGG | - | chr2.4:6928195-6928214 | MS.gene31178:CDS | 40.0% | |
| GGATCAGGAATAGTTTCTGT+TGG | - | chr2.4:6927755-6927774 | MS.gene31178:CDS | 40.0% | |
| GGGATATATTTGGATCAGCT+CGG | - | chr2.4:6928818-6928837 | MS.gene31178:intron | 40.0% | |
| GTGTATCTTAGAGGTCATGA+AGG | - | chr2.4:6928907-6928926 | MS.gene31178:CDS | 40.0% | |
| TAATGCATTACGCCAAGGAA+AGG | - | chr2.4:6927368-6927387 | MS.gene31178:intron | 40.0% | |
| TACTGAGGCTTCTGTAGATT+TGG | - | chr2.4:6928134-6928153 | MS.gene31178:CDS | 40.0% | |
| TATGTGACGCTTCAAGGTAT+CGG | - | chr2.4:6928489-6928508 | MS.gene31178:CDS | 40.0% | |
| TCATAGCCAAATCTAGTTGC+TGG | + | chr2.4:6928855-6928874 | None:intergenic | 40.0% | |
| TCCTTGGCGTAATGCATTAA+GGG | + | chr2.4:6927367-6927386 | None:intergenic | 40.0% | |
| TCGGAGAAAACGAGAGAAAT+TGG | - | chr2.4:6928508-6928527 | MS.gene31178:CDS | 40.0% | |
| TCTTGTTAGTACCAAGGATG+TGG | - | chr2.4:6927715-6927734 | MS.gene31178:CDS | 40.0% | |
| TTCCTTGGCGTAATGCATTA+AGG | + | chr2.4:6927368-6927387 | None:intergenic | 40.0% | |
| TTCTGTTGGCATGAAAGAAG+AGG | - | chr2.4:6927769-6927788 | MS.gene31178:CDS | 40.0% | |
| TTGATTGAAGAAGCTGGAAG+AGG | - | chr2.4:6928877-6928896 | MS.gene31178:CDS | 40.0% | |
| TTGGTTGCTTAGGGAAACAT+AGG | - | chr2.4:6928748-6928767 | MS.gene31178:CDS | 40.0% | |
| ! | ATAGAAATGGTGGAGTGCTT+AGG | - | chr2.4:6928100-6928119 | MS.gene31178:intron | 40.0% |
| ! | CACTGTGATAGTGAAAGTAG+GGG | + | chr2.4:6927855-6927874 | None:intergenic | 40.0% |
| ! | CCACTGTGATAGTGAAAGTA+GGG | + | chr2.4:6927856-6927875 | None:intergenic | 40.0% |
| ! | CCCATAGATATGACCCATTT+TGG | + | chr2.4:6929776-6929795 | None:intergenic | 40.0% |
| ! | GAAGACGTGTTTGATGATAG+TGG | - | chr2.4:6927192-6927211 | MS.gene31178:intron | 40.0% |
| ! | TACTCTTTAGAGGGACAATC+TGG | + | chr2.4:6927327-6927346 | None:intergenic | 40.0% |
| !! | ACATTTATTGGTGGCGAGTT+TGG | + | chr2.4:6929343-6929362 | None:intergenic | 40.0% |
| !! | ACCTGGTTTTCTTAAGTCCT+CGG | + | chr2.4:6928061-6928080 | None:intergenic | 40.0% |
| !!! | GCTATTGGGTTTTCTAAGGT+TGG | - | chr2.4:6927165-6927184 | MS.gene31178:intron | 40.0% |
| ACGTGGGAAATCAAAGGACT+AGG | + | chr2.4:6926957-6926976 | None:intergenic | 45.0% | |
| ATTTGGCCTGTGGAACAACA+AGG | - | chr2.4:6927122-6927141 | MS.gene31178:intron | 45.0% | |
| CCCTACTTTCACTATCACAG+TGG | - | chr2.4:6927853-6927872 | MS.gene31178:CDS | 45.0% | |
| CGCTTGTTTGCTTCAGTGAT+TGG | + | chr2.4:6929733-6929752 | None:intergenic | 45.0% | |
| CGTGGGAAATCAAAGGACTA+GGG | + | chr2.4:6926956-6926975 | None:intergenic | 45.0% | |
| CTTAGAGGTCATGAAGGAAG+AGG | - | chr2.4:6928913-6928932 | MS.gene31178:CDS | 45.0% | |
| GAATCCTCTTCTTCAGTGTC+AGG | + | chr2.4:6927827-6927846 | None:intergenic | 45.0% | |
| GCTGTGAGAACAGAAAATGG+TGG | + | chr2.4:6928177-6928196 | None:intergenic | 45.0% | |
| GCTTAGGGAAACATAGGAGA+TGG | - | chr2.4:6928754-6928773 | MS.gene31178:intron | 45.0% | |
| GGATATGGTTTAGCTGTGAC+AGG | - | chr2.4:6929688-6929707 | MS.gene31178:intron | 45.0% | |
| TCAGTGTCAGGTGACATAAG+AGG | + | chr2.4:6927815-6927834 | None:intergenic | 45.0% | |
| TCCGAGGACTTAAGAAAACC+AGG | - | chr2.4:6928057-6928076 | MS.gene31178:intron | 45.0% | |
| TGAGCATGTGGCTGTTGTAA+AGG | - | chr2.4:6928613-6928632 | MS.gene31178:CDS | 45.0% | |
| TGTCAGGTGACATAAGAGGA+AGG | + | chr2.4:6927811-6927830 | None:intergenic | 45.0% | |
| ! | GCCACTGTGATAGTGAAAGT+AGG | + | chr2.4:6927857-6927876 | None:intergenic | 45.0% |
| ! | GTAGATTTGGTTGCATTGGC+AGG | - | chr2.4:6928147-6928166 | MS.gene31178:CDS | 45.0% |
| ! | GTGATGACGTGGGAAATCAA+AGG | + | chr2.4:6926963-6926982 | None:intergenic | 45.0% |
| ! | TGCATTAAGGGCATGCTCAA+TGG | + | chr2.4:6927355-6927374 | None:intergenic | 45.0% |
| !! | ACCTTGAATTGGTGATGACG+TGG | + | chr2.4:6926974-6926993 | None:intergenic | 45.0% |
| !! | CCTTGAATTGGTGATGACGT+GGG | + | chr2.4:6926973-6926992 | None:intergenic | 45.0% |
| !! | GTCATGAAGGAAGAGGCATT+GGG | - | chr2.4:6928920-6928939 | MS.gene31178:CDS | 45.0% |
| !! | GTGCAGATTTTGAGGGACAT+TGG | - | chr2.4:6929610-6929629 | MS.gene31178:CDS | 45.0% |
| !! | TCAGTGATTGGTGTTAGCAC+AGG | + | chr2.4:6929721-6929740 | None:intergenic | 45.0% |
| !! | TTCTCACCTTGTTGTTCCAC+AGG | + | chr2.4:6927131-6927150 | None:intergenic | 45.0% |
| AAGTCCTCGGATTTCGACTC+TGG | + | chr2.4:6928048-6928067 | None:intergenic | 50.0% | |
| ATCTCCAGAGTCGAAATCCG+AGG | - | chr2.4:6928041-6928060 | MS.gene31178:intron | 50.0% | |
| CCCACGTCATCACCAATTCA+AGG | - | chr2.4:6926970-6926989 | MS.gene31178:CDS | 50.0% | |
| CTGTGGCCAGCAACTAGATT+TGG | - | chr2.4:6928846-6928865 | MS.gene31178:intron | 50.0% | |
| GATGCTCGTGAGTATGGCAT+TGG | - | chr2.4:6929027-6929046 | MS.gene31178:CDS | 50.0% | |
| GCCCTTAATGCATTACGCCA+AGG | - | chr2.4:6927363-6927382 | MS.gene31178:intron | 50.0% | |
| GCTGTTGATGCTCGTGAGTA+TGG | - | chr2.4:6929021-6929040 | MS.gene31178:CDS | 50.0% | |
| GTCACCTGACACTGAAGAAG+AGG | - | chr2.4:6927820-6927839 | MS.gene31178:CDS | 50.0% | |
| GTTGGATGGAACTGAGCATG+TGG | - | chr2.4:6928601-6928620 | MS.gene31178:CDS | 50.0% | |
| TAGGAGAGCTGGTCATACTG+AGG | - | chr2.4:6928119-6928138 | MS.gene31178:CDS | 50.0% | |
| TGGAACTTCCACGGGTGTAT+CGG | - | chr2.4:6927984-6928003 | MS.gene31178:intron | 50.0% | |
| ! | GGTCATGAAGGAAGAGGCAT+TGG | - | chr2.4:6928919-6928938 | MS.gene31178:CDS | 50.0% |
| !! | GAAGGAAGAGGCATTGGGTT+AGG | - | chr2.4:6928925-6928944 | MS.gene31178:CDS | 50.0% |
| !! | TGAGTATGGCATTGGTGCCC+AGG | - | chr2.4:6929035-6929054 | MS.gene31178:CDS | 55.0% |
| ! | GGTGGAGTGCTTAGGAGAGC+TGG | - | chr2.4:6928108-6928127 | MS.gene31178:intron | 60.0% |
| !! | GGATCAGCTCGGTGTGACTG+TGG | - | chr2.4:6928829-6928848 | MS.gene31178:intron | 60.0% |
| !! | TTCCACGGGTGTATCGGCTG+CGG | - | chr2.4:6927990-6928009 | MS.gene31178:intron | 60.0% |
| ATCCGCAGCCGATACACCCG+TGG | + | chr2.4:6927995-6928014 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 6926936 | 6929807 | 6926936 | ID=MS.gene31178 |
| chr2.4 | mRNA | 6926936 | 6929807 | 6926936 | ID=MS.gene31178.t1;Parent=MS.gene31178 |
| chr2.4 | exon | 6929752 | 6929807 | 6929752 | ID=MS.gene31178.t1.exon1;Parent=MS.gene31178.t1 |
| chr2.4 | CDS | 6929752 | 6929807 | 6929752 | ID=cds.MS.gene31178.t1;Parent=MS.gene31178.t1 |
| chr2.4 | exon | 6929354 | 6929657 | 6929354 | ID=MS.gene31178.t1.exon2;Parent=MS.gene31178.t1 |
| chr2.4 | CDS | 6929354 | 6929657 | 6929354 | ID=cds.MS.gene31178.t1;Parent=MS.gene31178.t1 |
| chr2.4 | exon | 6928869 | 6929090 | 6928869 | ID=MS.gene31178.t1.exon3;Parent=MS.gene31178.t1 |
| chr2.4 | CDS | 6928869 | 6929090 | 6928869 | ID=cds.MS.gene31178.t1;Parent=MS.gene31178.t1 |
| chr2.4 | exon | 6928445 | 6928770 | 6928445 | ID=MS.gene31178.t1.exon4;Parent=MS.gene31178.t1 |
| chr2.4 | CDS | 6928445 | 6928770 | 6928445 | ID=cds.MS.gene31178.t1;Parent=MS.gene31178.t1 |
| chr2.4 | exon | 6928109 | 6928238 | 6928109 | ID=MS.gene31178.t1.exon5;Parent=MS.gene31178.t1 |
| chr2.4 | CDS | 6928109 | 6928238 | 6928109 | ID=cds.MS.gene31178.t1;Parent=MS.gene31178.t1 |
| chr2.4 | exon | 6927687 | 6927983 | 6927687 | ID=MS.gene31178.t1.exon6;Parent=MS.gene31178.t1 |
| chr2.4 | CDS | 6927687 | 6927983 | 6927687 | ID=cds.MS.gene31178.t1;Parent=MS.gene31178.t1 |
| chr2.4 | exon | 6926936 | 6927127 | 6926936 | ID=MS.gene31178.t1.exon7;Parent=MS.gene31178.t1 |
| chr2.4 | CDS | 6926936 | 6927127 | 6926936 | ID=cds.MS.gene31178.t1;Parent=MS.gene31178.t1 |
| Gene Sequence |
| Protein sequence |
