Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30932.t1 | XP_003597321.2 | 96.1 | 508 | 19 | 1 | 1 | 508 | 1 | 507 | 2.20E-270 | 941 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30932.t1 | Q9FN89 | 67.4 | 513 | 149 | 6 | 1 | 507 | 2 | 502 | 4.8e-189 | 662.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30932.t1 | G7IHK9 | 96.1 | 508 | 19 | 1 | 1 | 508 | 1 | 507 | 1.6e-270 | 941.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049222 | MS.gene30932 | 0.801916 | 7.18E-49 | -1.69E-46 |
| MS.gene049356 | MS.gene30932 | 0.879925 | 8.37E-70 | -1.69E-46 |
| MS.gene049369 | MS.gene30932 | 0.869602 | 2.74E-66 | -1.69E-46 |
| MS.gene049396 | MS.gene30932 | 0.843579 | 1.29E-58 | -1.69E-46 |
| MS.gene049427 | MS.gene30932 | 0.805106 | 1.57E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene30932 | 0.823958 | 1.05E-53 | -1.69E-46 |
| MS.gene049661 | MS.gene30932 | 0.801339 | 9.44E-49 | -1.69E-46 |
| MS.gene049662 | MS.gene30932 | 0.800279 | 1.55E-48 | -1.69E-46 |
| MS.gene049805 | MS.gene30932 | 0.853917 | 1.74E-61 | -1.69E-46 |
| MS.gene050426 | MS.gene30932 | -0.809256 | 2.07E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene30932 | 0.859996 | 2.81E-63 | -1.69E-46 |
| MS.gene050670 | MS.gene30932 | 0.903825 | 2.32E-79 | -1.69E-46 |
| MS.gene050747 | MS.gene30932 | 0.84587 | 3.10E-59 | -1.69E-46 |
| MS.gene050772 | MS.gene30932 | 0.818076 | 2.37E-52 | -1.69E-46 |
| MS.gene050950 | MS.gene30932 | 0.840419 | 8.79E-58 | -1.69E-46 |
| MS.gene050971 | MS.gene30932 | 0.827654 | 1.39E-54 | -1.69E-46 |
| MS.gene05105 | MS.gene30932 | 0.85798 | 1.13E-62 | -1.69E-46 |
| MS.gene051360 | MS.gene30932 | 0.818142 | 2.29E-52 | -1.69E-46 |
| MS.gene051387 | MS.gene30932 | 0.864264 | 1.38E-64 | -1.69E-46 |
| MS.gene051521 | MS.gene30932 | 0.806817 | 6.84E-50 | -1.69E-46 |
| MS.gene051525 | MS.gene30932 | 0.839173 | 1.86E-57 | -1.69E-46 |
| MS.gene051582 | MS.gene30932 | 0.814245 | 1.70E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene30932 | 0.836844 | 7.37E-57 | -1.69E-46 |
| MS.gene051692 | MS.gene30932 | 0.808685 | 2.74E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene30932 | 0.823204 | 1.57E-53 | -1.69E-46 |
| MS.gene052077 | MS.gene30932 | 0.811664 | 6.25E-51 | -1.69E-46 |
| MS.gene052134 | MS.gene30932 | 0.80028 | 1.55E-48 | -1.69E-46 |
| MS.gene052135 | MS.gene30932 | 0.817477 | 3.23E-52 | -1.69E-46 |
| MS.gene052136 | MS.gene30932 | 0.822237 | 2.64E-53 | -1.69E-46 |
| MS.gene052188 | MS.gene30932 | 0.863883 | 1.81E-64 | -1.69E-46 |
| MS.gene052253 | MS.gene30932 | 0.84153 | 4.49E-58 | -1.69E-46 |
| MS.gene052310 | MS.gene30932 | 0.831297 | 1.81E-55 | -1.69E-46 |
| MS.gene052340 | MS.gene30932 | 0.829227 | 5.79E-55 | -1.69E-46 |
| MS.gene052346 | MS.gene30932 | 0.815324 | 9.80E-52 | -1.69E-46 |
| MS.gene052414 | MS.gene30932 | 0.868013 | 8.95E-66 | -1.69E-46 |
| MS.gene052421 | MS.gene30932 | 0.877033 | 8.69E-69 | -1.69E-46 |
| MS.gene052481 | MS.gene30932 | 0.806278 | 8.89E-50 | -1.69E-46 |
| MS.gene052484 | MS.gene30932 | 0.818441 | 1.96E-52 | -1.69E-46 |
| MS.gene052485 | MS.gene30932 | 0.839154 | 1.88E-57 | -1.69E-46 |
| MS.gene052501 | MS.gene30932 | 0.841219 | 5.43E-58 | -1.69E-46 |
| MS.gene052505 | MS.gene30932 | 0.841785 | 3.85E-58 | -1.69E-46 |
| MS.gene052615 | MS.gene30932 | 0.800052 | 1.73E-48 | -1.69E-46 |
| MS.gene052982 | MS.gene30932 | 0.82185 | 3.24E-53 | -1.69E-46 |
| MS.gene053103 | MS.gene30932 | 0.821287 | 4.37E-53 | -1.69E-46 |
| MS.gene053104 | MS.gene30932 | 0.820441 | 6.85E-53 | -1.69E-46 |
| MS.gene053169 | MS.gene30932 | 0.802402 | 5.71E-49 | -1.69E-46 |
| MS.gene05316 | MS.gene30932 | 0.809349 | 1.98E-50 | -1.69E-46 |
| MS.gene053449 | MS.gene30932 | 0.856468 | 3.15E-62 | -1.69E-46 |
| MS.gene053574 | MS.gene30932 | 0.835454 | 1.66E-56 | -1.69E-46 |
| MS.gene053579 | MS.gene30932 | 0.811539 | 6.66E-51 | -1.69E-46 |
| MS.gene053626 | MS.gene30932 | 0.805015 | 1.64E-49 | -1.69E-46 |
| MS.gene053758 | MS.gene30932 | 0.830621 | 2.65E-55 | -1.69E-46 |
| MS.gene053912 | MS.gene30932 | 0.84733 | 1.24E-59 | -1.69E-46 |
| MS.gene053916 | MS.gene30932 | 0.814337 | 1.62E-51 | -1.69E-46 |
| MS.gene054123 | MS.gene30932 | 0.850426 | 1.71E-60 | -1.69E-46 |
| MS.gene054349 | MS.gene30932 | 0.808874 | 2.50E-50 | -1.69E-46 |
| MS.gene054742 | MS.gene30932 | -0.801308 | 9.57E-49 | -1.69E-46 |
| MS.gene054955 | MS.gene30932 | 0.808922 | 2.44E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene30932 | 0.872995 | 2.07E-67 | -1.69E-46 |
| MS.gene055116 | MS.gene30932 | 0.857228 | 1.88E-62 | -1.69E-46 |
| MS.gene055224 | MS.gene30932 | 0.815642 | 8.33E-52 | -1.69E-46 |
| MS.gene055289 | MS.gene30932 | 0.816671 | 4.90E-52 | -1.69E-46 |
| MS.gene055369 | MS.gene30932 | 0.863379 | 2.60E-64 | -1.69E-46 |
| MS.gene055486 | MS.gene30932 | 0.805294 | 1.43E-49 | -1.69E-46 |
| MS.gene055539 | MS.gene30932 | 0.840328 | 9.29E-58 | -1.69E-46 |
| MS.gene05553 | MS.gene30932 | 0.835835 | 1.33E-56 | -1.69E-46 |
| MS.gene055741 | MS.gene30932 | 0.846219 | 2.49E-59 | -1.69E-46 |
| MS.gene055744 | MS.gene30932 | 0.85124 | 1.01E-60 | -1.69E-46 |
| MS.gene055909 | MS.gene30932 | 0.863197 | 2.96E-64 | -1.69E-46 |
| MS.gene055911 | MS.gene30932 | 0.865605 | 5.23E-65 | -1.69E-46 |
| MS.gene05592 | MS.gene30932 | 0.820809 | 5.64E-53 | -1.69E-46 |
| MS.gene055941 | MS.gene30932 | 0.801313 | 9.55E-49 | -1.69E-46 |
| MS.gene056166 | MS.gene30932 | 0.829151 | 6.04E-55 | -1.69E-46 |
| MS.gene056407 | MS.gene30932 | 0.846414 | 2.20E-59 | -1.69E-46 |
| MS.gene056422 | MS.gene30932 | 0.841755 | 3.92E-58 | -1.69E-46 |
| MS.gene056511 | MS.gene30932 | 0.903332 | 3.87E-79 | -1.69E-46 |
| MS.gene056514 | MS.gene30932 | 0.841745 | 3.94E-58 | -1.69E-46 |
| MS.gene056609 | MS.gene30932 | 0.803257 | 3.80E-49 | -1.69E-46 |
| MS.gene05664 | MS.gene30932 | 0.84021 | 9.97E-58 | -1.69E-46 |
| MS.gene056659 | MS.gene30932 | 0.815859 | 7.45E-52 | -1.69E-46 |
| MS.gene05666 | MS.gene30932 | 0.849091 | 4.04E-60 | -1.69E-46 |
| MS.gene056723 | MS.gene30932 | 0.822494 | 2.30E-53 | -1.69E-46 |
| MS.gene056876 | MS.gene30932 | 0.829026 | 6.48E-55 | -1.69E-46 |
| MS.gene057011 | MS.gene30932 | 0.801768 | 7.70E-49 | -1.69E-46 |
| MS.gene057019 | MS.gene30932 | 0.808761 | 2.64E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene30932 | 0.834938 | 2.24E-56 | -1.69E-46 |
| MS.gene057086 | MS.gene30932 | 0.807622 | 4.62E-50 | -1.69E-46 |
| MS.gene057124 | MS.gene30932 | 0.865797 | 4.55E-65 | -1.69E-46 |
| MS.gene057146 | MS.gene30932 | 0.815501 | 8.95E-52 | -1.69E-46 |
| MS.gene057331 | MS.gene30932 | 0.802433 | 5.62E-49 | -1.69E-46 |
| MS.gene05735 | MS.gene30932 | 0.837709 | 4.43E-57 | -1.69E-46 |
| MS.gene057396 | MS.gene30932 | 0.836861 | 7.30E-57 | -1.69E-46 |
| MS.gene057416 | MS.gene30932 | 0.822517 | 2.27E-53 | -1.69E-46 |
| MS.gene057448 | MS.gene30932 | 0.814587 | 1.43E-51 | -1.69E-46 |
| MS.gene057449 | MS.gene30932 | 0.813204 | 2.88E-51 | -1.69E-46 |
| MS.gene057450 | MS.gene30932 | 0.809811 | 1.57E-50 | -1.69E-46 |
| MS.gene057537 | MS.gene30932 | 0.806706 | 7.22E-50 | -1.69E-46 |
| MS.gene057610 | MS.gene30932 | 0.80648 | 8.06E-50 | -1.69E-46 |
| MS.gene057734 | MS.gene30932 | 0.875396 | 3.18E-68 | -1.69E-46 |
| MS.gene057749 | MS.gene30932 | 0.827816 | 1.27E-54 | -1.69E-46 |
| MS.gene057823 | MS.gene30932 | 0.836936 | 6.99E-57 | -1.69E-46 |
| MS.gene057856 | MS.gene30932 | 0.836773 | 7.69E-57 | -1.69E-46 |
| MS.gene057926 | MS.gene30932 | 0.805429 | 1.34E-49 | -1.69E-46 |
| MS.gene057927 | MS.gene30932 | 0.844503 | 7.26E-59 | -1.69E-46 |
| MS.gene058006 | MS.gene30932 | 0.804214 | 2.40E-49 | -1.69E-46 |
| MS.gene058007 | MS.gene30932 | 0.872636 | 2.73E-67 | -1.69E-46 |
| MS.gene058019 | MS.gene30932 | 0.823017 | 1.74E-53 | -1.69E-46 |
| MS.gene058075 | MS.gene30932 | 0.833488 | 5.18E-56 | -1.69E-46 |
| MS.gene058090 | MS.gene30932 | 0.808157 | 3.55E-50 | -1.69E-46 |
| MS.gene058120 | MS.gene30932 | 0.831605 | 1.52E-55 | -1.69E-46 |
| MS.gene058130 | MS.gene30932 | 0.801537 | 8.59E-49 | -1.69E-46 |
| MS.gene058293 | MS.gene30932 | 0.814961 | 1.18E-51 | -1.69E-46 |
| MS.gene058365 | MS.gene30932 | 0.80618 | 9.32E-50 | -1.69E-46 |
| MS.gene058376 | MS.gene30932 | 0.839292 | 1.73E-57 | -1.69E-46 |
| MS.gene058444 | MS.gene30932 | 0.825275 | 5.12E-54 | -1.69E-46 |
| MS.gene058660 | MS.gene30932 | 0.808409 | 3.14E-50 | -1.69E-46 |
| MS.gene058700 | MS.gene30932 | 0.872601 | 2.80E-67 | -1.69E-46 |
| MS.gene058928 | MS.gene30932 | 0.850943 | 1.22E-60 | -1.69E-46 |
| MS.gene058948 | MS.gene30932 | 0.847654 | 1.01E-59 | -1.69E-46 |
| MS.gene058949 | MS.gene30932 | 0.815496 | 8.97E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene30932 | 0.824556 | 7.57E-54 | -1.69E-46 |
| MS.gene05934 | MS.gene30932 | 0.821561 | 3.78E-53 | -1.69E-46 |
| MS.gene059366 | MS.gene30932 | 0.855247 | 7.17E-62 | -1.69E-46 |
| MS.gene059368 | MS.gene30932 | 0.826968 | 2.03E-54 | -1.69E-46 |
| MS.gene059420 | MS.gene30932 | 0.841345 | 5.03E-58 | -1.69E-46 |
| MS.gene059455 | MS.gene30932 | 0.832424 | 9.53E-56 | -1.69E-46 |
| MS.gene059462 | MS.gene30932 | 0.804633 | 1.97E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene30932 | 0.806662 | 7.38E-50 | -1.69E-46 |
| MS.gene059597 | MS.gene30932 | 0.810266 | 1.26E-50 | -1.69E-46 |
| MS.gene05959 | MS.gene30932 | 0.804314 | 2.29E-49 | -1.69E-46 |
| MS.gene059674 | MS.gene30932 | 0.854175 | 1.47E-61 | -1.69E-46 |
| MS.gene059676 | MS.gene30932 | 0.834355 | 3.14E-56 | -1.69E-46 |
| MS.gene059688 | MS.gene30932 | 0.869861 | 2.25E-66 | -1.69E-46 |
| MS.gene059692 | MS.gene30932 | 0.847627 | 1.03E-59 | -1.69E-46 |
| MS.gene059695 | MS.gene30932 | 0.85326 | 2.69E-61 | -1.69E-46 |
| MS.gene059711 | MS.gene30932 | 0.825046 | 5.80E-54 | -1.69E-46 |
| MS.gene059807 | MS.gene30932 | 0.876912 | 9.57E-69 | -1.69E-46 |
| MS.gene059870 | MS.gene30932 | 0.838121 | 3.47E-57 | -1.69E-46 |
| MS.gene059933 | MS.gene30932 | 0.825052 | 5.78E-54 | -1.69E-46 |
| MS.gene060372 | MS.gene30932 | 0.8354 | 1.72E-56 | -1.69E-46 |
| MS.gene060403 | MS.gene30932 | 0.856378 | 3.35E-62 | -1.69E-46 |
| MS.gene060804 | MS.gene30932 | 0.863331 | 2.69E-64 | -1.69E-46 |
| MS.gene060818 | MS.gene30932 | 0.806452 | 8.17E-50 | -1.69E-46 |
| MS.gene060835 | MS.gene30932 | 0.863815 | 1.90E-64 | -1.69E-46 |
| MS.gene060837 | MS.gene30932 | 0.866117 | 3.60E-65 | -1.69E-46 |
| MS.gene06092 | MS.gene30932 | 0.803548 | 3.31E-49 | -1.69E-46 |
| MS.gene06097 | MS.gene30932 | 0.816971 | 4.20E-52 | -1.69E-46 |
| MS.gene061041 | MS.gene30932 | 0.863918 | 1.77E-64 | -1.69E-46 |
| MS.gene061049 | MS.gene30932 | 0.805482 | 1.31E-49 | -1.69E-46 |
| MS.gene061051 | MS.gene30932 | -0.855856 | 4.76E-62 | -1.69E-46 |
| MS.gene061154 | MS.gene30932 | 0.862754 | 4.05E-64 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene30932 | MS.gene90199 | PPI |
| MS.gene30932 | MS.gene02178 | PPI |
| MS.gene30932 | MS.gene01192 | PPI |
| MS.gene30932 | MS.gene053559 | PPI |
| MS.gene30932 | MS.gene028458 | PPI |
| MS.gene071898 | MS.gene30932 | PPI |
| MS.gene30932 | MS.gene068045 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30932.t1 | MTR_2g096330 | 96.654 | 508 | 16 | 1 | 1 | 508 | 1 | 507 | 0.0 | 1011 |
| MS.gene30932.t1 | MTR_2g009270 | 66.114 | 422 | 141 | 2 | 88 | 508 | 102 | 522 | 0.0 | 580 |
| MS.gene30932.t1 | MTR_4g094130 | 67.079 | 404 | 132 | 1 | 102 | 505 | 110 | 512 | 0.0 | 576 |
| MS.gene30932.t1 | MTR_4g094130 | 68.052 | 385 | 122 | 1 | 121 | 505 | 1 | 384 | 0.0 | 554 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30932.t1 | AT5G59750 | 69.591 | 513 | 138 | 6 | 1 | 507 | 2 | 502 | 0.0 | 716 |
| MS.gene30932.t1 | AT5G59750 | 65.265 | 547 | 138 | 7 | 1 | 507 | 2 | 536 | 0.0 | 699 |
| MS.gene30932.t1 | AT5G59750 | 67.031 | 458 | 133 | 6 | 1 | 452 | 2 | 447 | 0.0 | 607 |
| MS.gene30932.t1 | AT5G64300 | 67.308 | 416 | 135 | 1 | 90 | 505 | 112 | 526 | 0.0 | 592 |
| MS.gene30932.t1 | AT2G22450 | 58.673 | 392 | 153 | 3 | 92 | 483 | 92 | 474 | 5.53e-161 | 466 |
Find 119 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAAATTTGTTGGTCTTAA+AGG | 0.107436 | 2.2:-5644978 | MS.gene30932:CDS |
| TGTTTAACTGGGGATATATT+TGG | 0.172347 | 2.2:-5645836 | MS.gene30932:CDS |
| TGTCACATCTTCCTACTAAA+TGG | 0.198867 | 2.2:-5646098 | MS.gene30932:CDS |
| TTCCTTGGCGTAATGCATTA+AGG | 0.202150 | 2.2:+5647259 | None:intergenic |
| TATTGTTAGGATGCAAAATA+TGG | 0.229542 | 2.2:-5646680 | MS.gene30932:intron |
| ACCTTGATCTTGCAAATTAT+AGG | 0.252533 | 2.2:+5645682 | None:intergenic |
| GAACAACAAGGTGAGAAATT+TGG | 0.257120 | 2.2:-5647490 | MS.gene30932:CDS |
| ACCAAGATGGGTCATATATA+TGG | 0.276727 | 2.2:-5644873 | MS.gene30932:CDS |
| TACTGAGGCTTCTGTAGATT+TGG | 0.288351 | 2.2:-5646510 | MS.gene30932:CDS |
| TTTGTTGGTCTTAAAGGATA+TGG | 0.289327 | 2.2:-5644972 | MS.gene30932:CDS |
| CGCTTGTTTGCTTCGGTGAT+TGG | 0.290801 | 2.2:+5644915 | None:intergenic |
| GTCCAAGCAAACATAGATTT+GGG | 0.316048 | 2.2:-5645650 | MS.gene30932:CDS |
| AGTCCAAGCAAACATAGATT+TGG | 0.316830 | 2.2:-5645651 | MS.gene30932:CDS |
| GTACATTCAGAATGTTTAAC+TGG | 0.320458 | 2.2:-5645848 | MS.gene30932:CDS |
| ATATATGGGTCTGATATATA+AGG | 0.354394 | 2.2:-5644858 | None:intergenic |
| ATAAAATATGTACCTTGAAT+TGG | 0.360216 | 2.2:+5647642 | None:intergenic |
| TCCTTGGCGTAATGCATTAA+GGG | 0.365334 | 2.2:+5647260 | None:intergenic |
| TCGGAGAAAACGAGAGAAAT+TGG | 0.372980 | 2.2:-5646136 | MS.gene30932:CDS |
| TTCTGTAGATTTGGTTGCAT+TGG | 0.388739 | 2.2:-5646501 | MS.gene30932:CDS |
| GTAGATTTGGTTGCATTGGC+AGG | 0.388977 | 2.2:-5646497 | MS.gene30932:CDS |
| GTCACATCTTCCTACTAAAT+GGG | 0.389348 | 2.2:-5646097 | MS.gene30932:CDS |
| ACTCATCATAGTGTAAGATT+TGG | 0.392279 | 2.2:-5647519 | MS.gene30932:CDS |
| TCATAGCCAAATCTAGTTGC+TGG | 0.393601 | 2.2:+5645792 | None:intergenic |
| AGAGCTGTGAGAACAGAAAA+TGG | 0.400675 | 2.2:+5646467 | None:intergenic |
| AACAATCCAGCAAAATTTGT+TGG | 0.402087 | 2.2:-5644987 | MS.gene30932:CDS |
| TACCCTTTAGAGGGACAATC+TGG | 0.403018 | 2.2:+5647300 | None:intergenic |
| TTTCCTCTCAAGTATAGAAA+TGG | 0.404838 | 2.2:-5646557 | MS.gene30932:CDS |
| AATTCTAGCTAACCTTTCCT+TGG | 0.419158 | 2.2:+5647244 | None:intergenic |
| AAATCAGTTATTGAGACAAT+TGG | 0.419486 | 2.2:+5646374 | None:intergenic |
| TCTCAATAACTGATTTGATA+AGG | 0.421147 | 2.2:-5646367 | MS.gene30932:intron |
| TGATGCTGAAGATGGAAATA+TGG | 0.422605 | 2.2:-5646441 | MS.gene30932:CDS |
| TAGGTAACGCTTGTTTGCTT+CGG | 0.423031 | 2.2:+5644908 | None:intergenic |
| AAGTCCTCGGATTTCGACTC+TGG | 0.423258 | 2.2:+5646599 | None:intergenic |
| AATGGAAGAGTACCCTTTAG+AGG | 0.423806 | 2.2:+5647290 | None:intergenic |
| CTGTGGCCAGCAACTAGATT+TGG | 0.426292 | 2.2:-5645798 | MS.gene30932:CDS |
| TGAAATAGACCCCATTTAGT+AGG | 0.431751 | 2.2:+5646087 | None:intergenic |
| GAAGGAAGAGGCATTGGGTT+AGG | 0.438985 | 2.2:-5645719 | MS.gene30932:CDS |
| GAATCCTCTTCTTCAGTCTC+AGG | 0.446487 | 2.2:+5646820 | None:intergenic |
| TTCTCACCTTGTTGTTCCAC+AGG | 0.446496 | 2.2:+5647496 | None:intergenic |
| ACCCCAAATCTATGTTTGCT+TGG | 0.446947 | 2.2:+5645648 | None:intergenic |
| CCCATATATATGACCCATCT+TGG | 0.449345 | 2.2:+5644872 | None:intergenic |
| TGTTGAAGGGAATCTTATAA+AGG | 0.455110 | 2.2:-5646959 | MS.gene30932:CDS |
| TTTATGATTAAACATGGATC+AGG | 0.455192 | 2.2:-5646904 | MS.gene30932:CDS |
| AGCGTTACCTAGAAACAAAA+AGG | 0.456329 | 2.2:-5644896 | MS.gene30932:CDS |
| GCTGTTGATGCTCGTGAGTA+TGG | 0.457469 | 2.2:-5645623 | MS.gene30932:CDS |
| ATGAAATTGATTGAAGAAGC+TGG | 0.460792 | 2.2:-5645773 | MS.gene30932:CDS |
| TGCATTAAGGGCATGCTCAA+TGG | 0.463896 | 2.2:+5647272 | None:intergenic |
| GATGAAAACAACAATGTTGA+AGG | 0.466495 | 2.2:-5646973 | MS.gene30932:CDS |
| GATCCAGATTGTCCCTCTAA+AGG | 0.478927 | 2.2:-5647303 | MS.gene30932:CDS |
| ATCCAGATTGTCCCTCTAAA+GGG | 0.479314 | 2.2:-5647302 | MS.gene30932:CDS |
| CCAAGATGGGTCATATATAT+GGG | 0.479755 | 2.2:-5644872 | MS.gene30932:CDS |
| GGTCATGAAGGAAGAGGCAT+TGG | 0.482864 | 2.2:-5645725 | MS.gene30932:CDS |
| TTGGTTGCTTAGGGAAACAT+AGG | 0.482975 | 2.2:-5645896 | MS.gene30932:intron |
| CCACTGTGATAGTGAAAGTA+GGG | 0.484212 | 2.2:+5646791 | None:intergenic |
| AATCATAAATGCCACATCCT+TGG | 0.486532 | 2.2:+5646918 | None:intergenic |
| GCCTATAATTTGCAAGATCA+AGG | 0.487252 | 2.2:-5645683 | MS.gene30932:CDS |
| TGGAACTTCCACGGGCGTAT+CGG | 0.490010 | 2.2:-5646660 | MS.gene30932:CDS |
| GGAGTAATTGTGTATCTTAG+AGG | 0.493061 | 2.2:-5645746 | MS.gene30932:CDS |
| ATAGAAATGGTGGAGTGCTT+AGG | 0.494926 | 2.2:-5646544 | MS.gene30932:CDS |
| CCCACGTCATCACCAATTCA+AGG | 0.497388 | 2.2:-5647654 | MS.gene30932:intron |
| GCTCTTGTTGATGCTGAAGA+TGG | 0.497501 | 2.2:-5646449 | MS.gene30932:CDS |
| TGAGTATGGCATTGGTGCCC+AGG | 0.497742 | 2.2:-5645609 | MS.gene30932:intron |
| ACGTGGGAAATCAAAGGACT+AGG | 0.503550 | 2.2:+5647670 | None:intergenic |
| TTGATTGAAGAAGCTGGAAG+AGG | 0.514495 | 2.2:-5645767 | MS.gene30932:CDS |
| TTCCACGGGCGTATCGGCTG+CGG | 0.519817 | 2.2:-5646654 | MS.gene30932:CDS |
| GGTGGAGTGCTTAGGAGAGC+TGG | 0.520674 | 2.2:-5646536 | MS.gene30932:CDS |
| TGTTATAGTTCAAAGTTGGA+TGG | 0.520999 | 2.2:-5646057 | MS.gene30932:CDS |
| GCTTAGGGAAACATAGGAGA+TGG | 0.523904 | 2.2:-5645890 | MS.gene30932:intron |
| GGATATGGTTTAGCTGTGAC+AGG | 0.524023 | 2.2:-5644957 | MS.gene30932:CDS |
| ATATTGTTATAGTTCAAAGT+TGG | 0.524855 | 2.2:-5646061 | MS.gene30932:CDS |
| TCAGTCTCAGGTGACATAAG+AGG | 0.529829 | 2.2:+5646832 | None:intergenic |
| GGGAATGAAGCAGAGTCCAT+AGG | 0.530818 | 2.2:+5647691 | None:intergenic |
| GCAAAATATGGAACTTCCAC+GGG | 0.532239 | 2.2:-5646668 | MS.gene30932:CDS |
| ACATTGGAGTTCGAACTATG+AGG | 0.535750 | 2.2:-5645019 | MS.gene30932:CDS |
| TATTTATTCAAAGCTTGCAT+CGG | 0.545583 | 2.2:-5647551 | MS.gene30932:intron |
| GGATCAGGAATAGTTTCTGT+TGG | 0.545719 | 2.2:-5646889 | MS.gene30932:CDS |
| TCGGTGATTGGTGTTAGCAC+AGG | 0.545794 | 2.2:+5644927 | None:intergenic |
| GTCACCTGAGACTGAAGAAG+AGG | 0.559881 | 2.2:-5646824 | MS.gene30932:CDS |
| CCACCATTTCTATACTTGAG+AGG | 0.560237 | 2.2:+5646554 | None:intergenic |
| TGAGCATGTGGCTGTTGTAA+AGG | 0.560783 | 2.2:-5646031 | MS.gene30932:intron |
| CTTAGAGGTCATGAAGGAAG+AGG | 0.564446 | 2.2:-5645731 | MS.gene30932:CDS |
| CGTGGGAAATCAAAGGACTA+GGG | 0.566760 | 2.2:+5647671 | None:intergenic |
| CCTCTCAAGTATAGAAATGG+TGG | 0.567977 | 2.2:-5646554 | MS.gene30932:CDS |
| TCTTGTTAGTACCAAGGATG+TGG | 0.568018 | 2.2:-5646929 | MS.gene30932:CDS |
| TAATGCATTACGCCAAGGAA+AGG | 0.571418 | 2.2:-5647256 | MS.gene30932:intron |
| TGCAAAATATGGAACTTCCA+CGG | 0.571857 | 2.2:-5646669 | MS.gene30932:CDS |
| TTCTGTTGGCATGAAAGAAG+AGG | 0.576477 | 2.2:-5646875 | MS.gene30932:CDS |
| ACCACTGTGATAGTGAAAGT+AGG | 0.590650 | 2.2:+5646790 | None:intergenic |
| GTCATGAAGGAAGAGGCATT+GGG | 0.591268 | 2.2:-5645724 | MS.gene30932:CDS |
| TTCTTTGTAAGTGAAGCTGA+AGG | 0.595370 | 2.2:-5647327 | MS.gene30932:CDS |
| ATGAAAACAACAATGTTGAA+GGG | 0.595372 | 2.2:-5646972 | MS.gene30932:CDS |
| TACATTCAGAATGTTTAACT+GGG | 0.597083 | 2.2:-5645847 | MS.gene30932:CDS |
| CTTAGGGAAACATAGGAGAT+GGG | 0.597548 | 2.2:-5645889 | MS.gene30932:intron |
| GCCCTTAATGCATTACGCCA+AGG | 0.607779 | 2.2:-5647261 | MS.gene30932:CDS |
| GATGCTCGTGAGTATGGCAT+TGG | 0.608440 | 2.2:-5645617 | MS.gene30932:CDS |
| GTGTATCTTAGAGGTCATGA+AGG | 0.608731 | 2.2:-5645737 | MS.gene30932:CDS |
| GGGATATATTTGGATCAGCT+CGG | 0.611108 | 2.2:-5645826 | MS.gene30932:CDS |
| GTGGCATTTATGATTAAACA+TGG | 0.613664 | 2.2:-5646910 | MS.gene30932:CDS |
| ATGGAAGAGTACCCTTTAGA+GGG | 0.617545 | 2.2:+5647291 | None:intergenic |
| TCCGAGGACTTAAGAAAACC+AGG | 0.619694 | 2.2:-5646587 | MS.gene30932:CDS |
| ATCCGCAGCCGATACGCCCG+TGG | 0.624899 | 2.2:+5646652 | None:intergenic |
| ATTTGGCCTGTGGAACAACA+AGG | 0.634139 | 2.2:-5647502 | MS.gene30932:CDS |
| ATAGTGTAAGATTTGGCCTG+TGG | 0.635119 | 2.2:-5647512 | MS.gene30932:CDS |
| TCACATCTTCCTACTAAATG+GGG | 0.639715 | 2.2:-5646096 | MS.gene30932:CDS |
| AGCATCTCTTGTTAGTACCA+AGG | 0.640073 | 2.2:-5646935 | MS.gene30932:CDS |
| GAAGACGTGTTTGATGATAG+TGG | 0.645204 | 2.2:-5647432 | MS.gene30932:CDS |
| GTGATGACGTGGGAAATCAA+AGG | 0.652787 | 2.2:+5647664 | None:intergenic |
| ACCTTGAATTGGTGATGACG+TGG | 0.653143 | 2.2:+5647653 | None:intergenic |
| GGATCAGCTCGGTGTGACTG+TGG | 0.657027 | 2.2:-5645815 | MS.gene30932:CDS |
| TCCAAGCAAACATAGATTTG+GGG | 0.659816 | 2.2:-5645649 | MS.gene30932:CDS |
| TCTCAGGTGACATAAGAGGA+AGG | 0.670240 | 2.2:+5646836 | None:intergenic |
| ATCTCCAGAGTCGAAATCCG+AGG | 0.671355 | 2.2:-5646603 | MS.gene30932:CDS |
| CACTGTGATAGTGAAAGTAG+GGG | 0.673445 | 2.2:+5646792 | None:intergenic |
| TAGGAGAGCTGGTCATACTG+AGG | 0.694929 | 2.2:-5646525 | MS.gene30932:CDS |
| ACATTCAGAATGTTTAACTG+GGG | 0.696460 | 2.2:-5645846 | MS.gene30932:CDS |
| GTTGGATGGAACTGAGCATG+TGG | 0.707210 | 2.2:-5646043 | MS.gene30932:CDS |
| CCTTGAATTGGTGATGACGT+GGG | 0.735027 | 2.2:+5647654 | None:intergenic |
| GCTGTGAGAACAGAAAATGG+TGG | 0.741200 | 2.2:+5646470 | None:intergenic |
| CCCTACTTTCACTATCACAG+TGG | 0.748231 | 2.2:-5646791 | MS.gene30932:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCAAAAAAAATATTGATAT+AGG | + | chr2.2:5645536-5645555 | None:intergenic | 10.0% |
| !!! | GTTTTTGTTTTTTTAAAATT+CGG | + | chr2.2:5647080-5647099 | None:intergenic | 10.0% |
| !! | TCTGAATTATAATTTCTTAT+TGG | - | chr2.2:5646633-5646652 | MS.gene30932:CDS | 15.0% |
| !! | TTGTGTAATATATTATTGTT+AGG | - | chr2.2:5645855-5645874 | MS.gene30932:CDS | 15.0% |
| !! | ATAAAATATGTACCTTGAAT+TGG | + | chr2.2:5644909-5644928 | None:intergenic | 20.0% |
| !! | ATATTGTTATAGTTCAAAGT+TGG | - | chr2.2:5646487-5646506 | MS.gene30932:CDS | 20.0% |
| !! | ATCTACTAATCAACATTTAT+TGG | + | chr2.2:5647258-5647277 | None:intergenic | 20.0% |
| !! | GAAATATTGCAAATTATACA+AGG | + | chr2.2:5647435-5647454 | None:intergenic | 20.0% |
| !! | GATTTGAAGAAAAATGAAAA+TGG | - | chr2.2:5645140-5645159 | MS.gene30932:intron | 20.0% |
| !!! | AATGCTAAGTTTTTTAAACT+GGG | + | chr2.2:5646141-5646160 | None:intergenic | 20.0% |
| !!! | GATGACATTTTATTAAGTAA+TGG | - | chr2.2:5645487-5645506 | MS.gene30932:intron | 20.0% |
| !!! | TGTAAAACATTTTTGAATGT+TGG | - | chr2.2:5647361-5647380 | MS.gene30932:CDS | 20.0% |
| ! | AAACATATGTTCTCTTAATG+TGG | - | chr2.2:5646328-5646347 | MS.gene30932:intron | 25.0% |
| ! | AAATCAGTTATTGAGACAAT+TGG | + | chr2.2:5646177-5646196 | None:intergenic | 25.0% |
| ! | ATGAAAACAACAATGTTGAA+GGG | - | chr2.2:5645576-5645595 | MS.gene30932:intron | 25.0% |
| ! | CAGTTTAAAAAACTTAGCAT+TGG | - | chr2.2:5646140-5646159 | MS.gene30932:CDS | 25.0% |
| ! | GATTTGTATTCACTAATACT+AGG | + | chr2.2:5647408-5647427 | None:intergenic | 25.0% |
| ! | GTGCATAATTATTGTTCAAT+TGG | + | chr2.2:5647331-5647350 | None:intergenic | 25.0% |
| ! | TAATGATCAACTAAAGTAGA+TGG | - | chr2.2:5647013-5647032 | MS.gene30932:intron | 25.0% |
| ! | TACATTCAGAATGTTTAACT+GGG | - | chr2.2:5646701-5646720 | MS.gene30932:intron | 25.0% |
| ! | TACTAATCAACATTTATTGG+TGG | + | chr2.2:5647255-5647274 | None:intergenic | 25.0% |
| ! | TATTGTTAAGCGAATTTGAT+TGG | + | chr2.2:5646367-5646386 | None:intergenic | 25.0% |
| ! | TATTGTTAGGATGCAAAATA+TGG | - | chr2.2:5645868-5645887 | MS.gene30932:CDS | 25.0% |
| ! | TATTTATTCAAAGCTTGCAT+CGG | - | chr2.2:5644997-5645016 | MS.gene30932:CDS | 25.0% |
| ! | TGAACAATAATTATGCACTT+TGG | - | chr2.2:5647333-5647352 | MS.gene30932:CDS | 25.0% |
| ! | TTTATGATTAAACATGGATC+AGG | - | chr2.2:5645644-5645663 | MS.gene30932:CDS | 25.0% |
| !! | AATTTCTTATTGGTTGCTTA+GGG | - | chr2.2:5646643-5646662 | MS.gene30932:CDS | 25.0% |
| !! | TAATTTCTTATTGGTTGCTT+AGG | - | chr2.2:5646642-5646661 | MS.gene30932:CDS | 25.0% |
| !!! | AATTTGGCTTTTTATGCTAT+TGG | - | chr2.2:5645074-5645093 | MS.gene30932:intron | 25.0% |
| !!! | ATTTGGCTTTTTATGCTATT+GGG | - | chr2.2:5645075-5645094 | MS.gene30932:intron | 25.0% |
| !!! | CAACTTATAATAGCTTGTTT+TGG | + | chr2.2:5647481-5647500 | None:intergenic | 25.0% |
| !!! | CAATGCTAAGTTTTTTAAAC+TGG | + | chr2.2:5646142-5646161 | None:intergenic | 25.0% |
| !!! | TACTATTCTTTAGTTTGCTT+AGG | + | chr2.2:5646609-5646628 | None:intergenic | 25.0% |
| !!! | TCTCAATAACTGATTTGATA+AGG | - | chr2.2:5646181-5646200 | MS.gene30932:intron | 25.0% |
| AACAATCCAGCAAAATTTGT+TGG | - | chr2.2:5647561-5647580 | MS.gene30932:intron | 30.0% | |
| ACATTCAGAATGTTTAACTG+GGG | - | chr2.2:5646702-5646721 | MS.gene30932:intron | 30.0% | |
| ACCTTGATCTTGCAAATTAT+AGG | + | chr2.2:5646869-5646888 | None:intergenic | 30.0% | |
| ACTAAAGTAGATGGTATGAT+TGG | - | chr2.2:5647022-5647041 | MS.gene30932:intron | 30.0% | |
| ACTCATCATAGTGTAAGATT+TGG | - | chr2.2:5645029-5645048 | MS.gene30932:CDS | 30.0% | |
| AGTGATTAAAAGATCTAACC+TGG | + | chr2.2:5646960-5646979 | None:intergenic | 30.0% | |
| ATGAAATTGATTGAAGAAGC+TGG | - | chr2.2:5646775-5646794 | MS.gene30932:intron | 30.0% | |
| GATGAAAACAACAATGTTGA+AGG | - | chr2.2:5645575-5645594 | MS.gene30932:intron | 30.0% | |
| GTACATTCAGAATGTTTAAC+TGG | - | chr2.2:5646700-5646719 | MS.gene30932:intron | 30.0% | |
| GTGATTAAAAGATCTAACCT+GGG | + | chr2.2:5646959-5646978 | None:intergenic | 30.0% | |
| GTGGCATTTATGATTAAACA+TGG | - | chr2.2:5645638-5645657 | MS.gene30932:CDS | 30.0% | |
| TATATGCAACAATCTGCATT+AGG | + | chr2.2:5645812-5645831 | None:intergenic | 30.0% | |
| TGTTATAGTTCAAAGTTGGA+TGG | - | chr2.2:5646491-5646510 | MS.gene30932:CDS | 30.0% | |
| TGTTGAAGGGAATCTTATAA+AGG | - | chr2.2:5645589-5645608 | MS.gene30932:intron | 30.0% | |
| TGTTTAACTGGGGATATATT+TGG | - | chr2.2:5646712-5646731 | MS.gene30932:intron | 30.0% | |
| TTTCCTCTCAAGTATAGAAA+TGG | - | chr2.2:5645991-5646010 | MS.gene30932:intron | 30.0% | |
| ! | GATAAATGTGCAGATTTTGA+GGG | - | chr2.2:5647506-5647525 | MS.gene30932:CDS | 30.0% |
| ! | TGATAAATGTGCAGATTTTG+AGG | - | chr2.2:5647505-5647524 | MS.gene30932:CDS | 30.0% |
| ! | TTAAGACCAACAAATTTTGC+TGG | + | chr2.2:5647570-5647589 | None:intergenic | 30.0% |
| ! | TTATGCTATTGGGTTTTCTA+AGG | - | chr2.2:5645085-5645104 | MS.gene30932:intron | 30.0% |
| !! | GCAAAATTTGTTGGTCTTAA+AGG | - | chr2.2:5647570-5647589 | MS.gene30932:intron | 30.0% |
| !! | TTTGTTGGTCTTAAAGGATA+TGG | - | chr2.2:5647576-5647595 | MS.gene30932:intron | 30.0% |
| AACACGAGTTCAACAAATAG+AGG | + | chr2.2:5644965-5644984 | None:intergenic | 35.0% | |
| AATCATAAATGCCACATCCT+TGG | + | chr2.2:5645633-5645652 | None:intergenic | 35.0% | |
| ACCAAGATGGGTCATATATA+TGG | - | chr2.2:5647675-5647694 | MS.gene30932:CDS | 35.0% | |
| AGAAACAAAAAGGACCAAGA+TGG | - | chr2.2:5647662-5647681 | MS.gene30932:CDS | 35.0% | |
| AGCGTTACCTAGAAACAAAA+AGG | - | chr2.2:5647652-5647671 | MS.gene30932:intron | 35.0% | |
| AGTCCAAGCAAACATAGATT+TGG | - | chr2.2:5646897-5646916 | MS.gene30932:CDS | 35.0% | |
| CCAAGATGGGTCATATATAT+GGG | - | chr2.2:5647676-5647695 | MS.gene30932:CDS | 35.0% | |
| CGTTACGTCTAATACATGTT+TGG | - | chr2.2:5645338-5645357 | MS.gene30932:intron | 35.0% | |
| GAAACAAAAAGGACCAAGAT+GGG | - | chr2.2:5647663-5647682 | MS.gene30932:CDS | 35.0% | |
| GAACAACAAGGTGAGAAATT+TGG | - | chr2.2:5645058-5645077 | MS.gene30932:intron | 35.0% | |
| GGAGTAATTGTGTATCTTAG+AGG | - | chr2.2:5646802-5646821 | MS.gene30932:CDS | 35.0% | |
| GTCACATCTTCCTACTAAAT+GGG | - | chr2.2:5646451-5646470 | MS.gene30932:CDS | 35.0% | |
| GTCCAAGCAAACATAGATTT+GGG | - | chr2.2:5646898-5646917 | MS.gene30932:CDS | 35.0% | |
| TCACATCTTCCTACTAAATG+GGG | - | chr2.2:5646452-5646471 | MS.gene30932:CDS | 35.0% | |
| TCCAAGCAAACATAGATTTG+GGG | - | chr2.2:5646899-5646918 | MS.gene30932:CDS | 35.0% | |
| TGAAATAGACCCCATTTAGT+AGG | + | chr2.2:5646464-5646483 | None:intergenic | 35.0% | |
| TGATGCTGAAGATGGAAATA+TGG | - | chr2.2:5646107-5646126 | MS.gene30932:CDS | 35.0% | |
| TGCAAAATATGGAACTTCCA+CGG | - | chr2.2:5645879-5645898 | MS.gene30932:CDS | 35.0% | |
| TGTCACATCTTCCTACTAAA+TGG | - | chr2.2:5646450-5646469 | MS.gene30932:CDS | 35.0% | |
| TTAATGTATGTGACGCTTCA+AGG | - | chr2.2:5646387-5646406 | MS.gene30932:CDS | 35.0% | |
| TTCTTTGTAAGTGAAGCTGA+AGG | - | chr2.2:5645221-5645240 | MS.gene30932:intron | 35.0% | |
| ! | AATTCTAGCTAACCTTTCCT+TGG | + | chr2.2:5645307-5645326 | None:intergenic | 35.0% |
| ! | GCCTATAATTTGCAAGATCA+AGG | - | chr2.2:5646865-5646884 | MS.gene30932:CDS | 35.0% |
| ! | TTCTGTAGATTTGGTTGCAT+TGG | - | chr2.2:5646047-5646066 | MS.gene30932:CDS | 35.0% |
| !! | AGCGTCTAACGTTTTTAAGA+GGG | + | chr2.2:5645168-5645187 | None:intergenic | 35.0% |
| !! | TAGCGTCTAACGTTTTTAAG+AGG | + | chr2.2:5645169-5645188 | None:intergenic | 35.0% |
| !! | TCTTGGTCCTTTTTGTTTCT+AGG | + | chr2.2:5647662-5647681 | None:intergenic | 35.0% |
| ACATTGGAGTTCGAACTATG+AGG | - | chr2.2:5647529-5647548 | MS.gene30932:CDS | 40.0% | |
| ACCCCAAATCTATGTTTGCT+TGG | + | chr2.2:5646903-5646922 | None:intergenic | 40.0% | |
| AGAGCTGTGAGAACAGAAAA+TGG | + | chr2.2:5646084-5646103 | None:intergenic | 40.0% | |
| AGCATCTCTTGTTAGTACCA+AGG | - | chr2.2:5645613-5645632 | MS.gene30932:CDS | 40.0% | |
| ATAGTGTAAGATTTGGCCTG+TGG | - | chr2.2:5645036-5645055 | MS.gene30932:intron | 40.0% | |
| ATCCAGATTGTCCCTCTAAA+GGG | - | chr2.2:5645246-5645265 | MS.gene30932:intron | 40.0% | |
| CCACCATTTCTATACTTGAG+AGG | + | chr2.2:5645997-5646016 | None:intergenic | 40.0% | |
| CCCATATATATGACCCATCT+TGG | + | chr2.2:5647679-5647698 | None:intergenic | 40.0% | |
| CCTCTCAAGTATAGAAATGG+TGG | - | chr2.2:5645994-5646013 | MS.gene30932:intron | 40.0% | |
| CTTAGGGAAACATAGGAGAT+GGG | - | chr2.2:5646659-5646678 | MS.gene30932:CDS | 40.0% | |
| GCAAAATATGGAACTTCCAC+GGG | - | chr2.2:5645880-5645899 | MS.gene30932:CDS | 40.0% | |
| GGATCAGGAATAGTTTCTGT+TGG | - | chr2.2:5645659-5645678 | MS.gene30932:CDS | 40.0% | |
| GGGATATATTTGGATCAGCT+CGG | - | chr2.2:5646722-5646741 | MS.gene30932:intron | 40.0% | |
| GTGTATCTTAGAGGTCATGA+AGG | - | chr2.2:5646811-5646830 | MS.gene30932:CDS | 40.0% | |
| TAATGCATTACGCCAAGGAA+AGG | - | chr2.2:5645292-5645311 | MS.gene30932:intron | 40.0% | |
| TACTGAGGCTTCTGTAGATT+TGG | - | chr2.2:5646038-5646057 | MS.gene30932:CDS | 40.0% | |
| TAGGTAACGCTTGTTTGCTT+CGG | + | chr2.2:5647643-5647662 | None:intergenic | 40.0% | |
| TATGTGACGCTTCAAGGTAT+CGG | - | chr2.2:5646393-5646412 | MS.gene30932:CDS | 40.0% | |
| TCATAGCCAAATCTAGTTGC+TGG | + | chr2.2:5646759-5646778 | None:intergenic | 40.0% | |
| TCCTTGGCGTAATGCATTAA+GGG | + | chr2.2:5645291-5645310 | None:intergenic | 40.0% | |
| TCGGAGAAAACGAGAGAAAT+TGG | - | chr2.2:5646412-5646431 | MS.gene30932:CDS | 40.0% | |
| TCTTGTTAGTACCAAGGATG+TGG | - | chr2.2:5645619-5645638 | MS.gene30932:CDS | 40.0% | |
| TTCCTTGGCGTAATGCATTA+AGG | + | chr2.2:5645292-5645311 | None:intergenic | 40.0% | |
| TTCTGTTGGCATGAAAGAAG+AGG | - | chr2.2:5645673-5645692 | MS.gene30932:CDS | 40.0% | |
| TTGAGAGGAAAAACATGACC+TGG | + | chr2.2:5645982-5646001 | None:intergenic | 40.0% | |
| TTGATTGAAGAAGCTGGAAG+AGG | - | chr2.2:5646781-5646800 | MS.gene30932:intron | 40.0% | |
| TTGGTTGCTTAGGGAAACAT+AGG | - | chr2.2:5646652-5646671 | MS.gene30932:CDS | 40.0% | |
| ! | ACCACTGTGATAGTGAAAGT+AGG | + | chr2.2:5645761-5645780 | None:intergenic | 40.0% |
| ! | ATAGAAATGGTGGAGTGCTT+AGG | - | chr2.2:5646004-5646023 | MS.gene30932:intron | 40.0% |
| ! | CACTGTGATAGTGAAAGTAG+GGG | + | chr2.2:5645759-5645778 | None:intergenic | 40.0% |
| ! | CCACTGTGATAGTGAAAGTA+GGG | + | chr2.2:5645760-5645779 | None:intergenic | 40.0% |
| ! | GAAGACGTGTTTGATGATAG+TGG | - | chr2.2:5645116-5645135 | MS.gene30932:intron | 40.0% |
| !! | AATGGAAGAGTACCCTTTAG+AGG | + | chr2.2:5645261-5645280 | None:intergenic | 40.0% |
| !! | ACCTGGTTTTCTTAAGTCCT+CGG | + | chr2.2:5645965-5645984 | None:intergenic | 40.0% |
| !! | ATGGAAGAGTACCCTTTAGA+GGG | + | chr2.2:5645260-5645279 | None:intergenic | 40.0% |
| !!! | GCTATTGGGTTTTCTAAGGT+TGG | - | chr2.2:5645089-5645108 | MS.gene30932:intron | 40.0% |
| ACGTGGGAAATCAAAGGACT+AGG | + | chr2.2:5644881-5644900 | None:intergenic | 45.0% | |
| ATTTGGCCTGTGGAACAACA+AGG | - | chr2.2:5645046-5645065 | MS.gene30932:intron | 45.0% | |
| CCCTACTTTCACTATCACAG+TGG | - | chr2.2:5645757-5645776 | MS.gene30932:CDS | 45.0% | |
| CGTGGGAAATCAAAGGACTA+GGG | + | chr2.2:5644880-5644899 | None:intergenic | 45.0% | |
| CTTAGAGGTCATGAAGGAAG+AGG | - | chr2.2:5646817-5646836 | MS.gene30932:CDS | 45.0% | |
| GAATCCTCTTCTTCAGTCTC+AGG | + | chr2.2:5645731-5645750 | None:intergenic | 45.0% | |
| GATCCAGATTGTCCCTCTAA+AGG | - | chr2.2:5645245-5645264 | MS.gene30932:intron | 45.0% | |
| GCTCTTGTTGATGCTGAAGA+TGG | - | chr2.2:5646099-5646118 | MS.gene30932:CDS | 45.0% | |
| GCTGTGAGAACAGAAAATGG+TGG | + | chr2.2:5646081-5646100 | None:intergenic | 45.0% | |
| GCTTAGGGAAACATAGGAGA+TGG | - | chr2.2:5646658-5646677 | MS.gene30932:CDS | 45.0% | |
| GGATATGGTTTAGCTGTGAC+AGG | - | chr2.2:5647591-5647610 | MS.gene30932:intron | 45.0% | |
| TCAGTCTCAGGTGACATAAG+AGG | + | chr2.2:5645719-5645738 | None:intergenic | 45.0% | |
| TCCGAGGACTTAAGAAAACC+AGG | - | chr2.2:5645961-5645980 | MS.gene30932:intron | 45.0% | |
| TCTCAGGTGACATAAGAGGA+AGG | + | chr2.2:5645715-5645734 | None:intergenic | 45.0% | |
| TGAGCATGTGGCTGTTGTAA+AGG | - | chr2.2:5646517-5646536 | MS.gene30932:CDS | 45.0% | |
| ! | GTAGATTTGGTTGCATTGGC+AGG | - | chr2.2:5646051-5646070 | MS.gene30932:CDS | 45.0% |
| ! | GTGATGACGTGGGAAATCAA+AGG | + | chr2.2:5644887-5644906 | None:intergenic | 45.0% |
| ! | TACCCTTTAGAGGGACAATC+TGG | + | chr2.2:5645251-5645270 | None:intergenic | 45.0% |
| ! | TGCATTAAGGGCATGCTCAA+TGG | + | chr2.2:5645279-5645298 | None:intergenic | 45.0% |
| !! | ACCTTGAATTGGTGATGACG+TGG | + | chr2.2:5644898-5644917 | None:intergenic | 45.0% |
| !! | CCTTGAATTGGTGATGACGT+GGG | + | chr2.2:5644897-5644916 | None:intergenic | 45.0% |
| !! | GTCATGAAGGAAGAGGCATT+GGG | - | chr2.2:5646824-5646843 | MS.gene30932:CDS | 45.0% |
| !! | GTGCAGATTTTGAGGGACAT+TGG | - | chr2.2:5647513-5647532 | MS.gene30932:CDS | 45.0% |
| !! | TTCTCACCTTGTTGTTCCAC+AGG | + | chr2.2:5645055-5645074 | None:intergenic | 45.0% |
| AAGTCCTCGGATTTCGACTC+TGG | + | chr2.2:5645952-5645971 | None:intergenic | 50.0% | |
| ATCTCCAGAGTCGAAATCCG+AGG | - | chr2.2:5645945-5645964 | MS.gene30932:intron | 50.0% | |
| CCCACGTCATCACCAATTCA+AGG | - | chr2.2:5644894-5644913 | MS.gene30932:CDS | 50.0% | |
| CGCTTGTTTGCTTCGGTGAT+TGG | + | chr2.2:5647636-5647655 | None:intergenic | 50.0% | |
| CTGTGGCCAGCAACTAGATT+TGG | - | chr2.2:5646750-5646769 | MS.gene30932:intron | 50.0% | |
| GATGCTCGTGAGTATGGCAT+TGG | - | chr2.2:5646931-5646950 | MS.gene30932:CDS | 50.0% | |
| GCCCTTAATGCATTACGCCA+AGG | - | chr2.2:5645287-5645306 | MS.gene30932:intron | 50.0% | |
| GCTGTTGATGCTCGTGAGTA+TGG | - | chr2.2:5646925-5646944 | MS.gene30932:CDS | 50.0% | |
| GTCACCTGAGACTGAAGAAG+AGG | - | chr2.2:5645724-5645743 | MS.gene30932:CDS | 50.0% | |
| GTTGGATGGAACTGAGCATG+TGG | - | chr2.2:5646505-5646524 | MS.gene30932:CDS | 50.0% | |
| TAGGAGAGCTGGTCATACTG+AGG | - | chr2.2:5646023-5646042 | MS.gene30932:intron | 50.0% | |
| ! | GGTCATGAAGGAAGAGGCAT+TGG | - | chr2.2:5646823-5646842 | MS.gene30932:CDS | 50.0% |
| !! | GAAGGAAGAGGCATTGGGTT+AGG | - | chr2.2:5646829-5646848 | MS.gene30932:CDS | 50.0% |
| !! | TCGGTGATTGGTGTTAGCAC+AGG | + | chr2.2:5647624-5647643 | None:intergenic | 50.0% |
| TGGAACTTCCACGGGCGTAT+CGG | - | chr2.2:5645888-5645907 | MS.gene30932:intron | 55.0% | |
| !! | TGAGTATGGCATTGGTGCCC+AGG | - | chr2.2:5646939-5646958 | MS.gene30932:CDS | 55.0% |
| ! | GGTGGAGTGCTTAGGAGAGC+TGG | - | chr2.2:5646012-5646031 | MS.gene30932:intron | 60.0% |
| !! | GGATCAGCTCGGTGTGACTG+TGG | - | chr2.2:5646733-5646752 | MS.gene30932:intron | 60.0% |
| !! | TTCCACGGGCGTATCGGCTG+CGG | - | chr2.2:5645894-5645913 | MS.gene30932:intron | 65.0% |
| ATCCGCAGCCGATACGCCCG+TGG | + | chr2.2:5645899-5645918 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 5644860 | 5647710 | 5644860 | ID=MS.gene30932 |
| chr2.2 | mRNA | 5644860 | 5647710 | 5644860 | ID=MS.gene30932.t1;Parent=MS.gene30932 |
| chr2.2 | exon | 5647655 | 5647710 | 5647655 | ID=MS.gene30932.t1.exon1;Parent=MS.gene30932.t1 |
| chr2.2 | CDS | 5647655 | 5647710 | 5647655 | ID=cds.MS.gene30932.t1;Parent=MS.gene30932.t1 |
| chr2.2 | exon | 5647257 | 5647560 | 5647257 | ID=MS.gene30932.t1.exon2;Parent=MS.gene30932.t1 |
| chr2.2 | CDS | 5647257 | 5647560 | 5647257 | ID=cds.MS.gene30932.t1;Parent=MS.gene30932.t1 |
| chr2.2 | exon | 5646792 | 5647013 | 5646792 | ID=MS.gene30932.t1.exon3;Parent=MS.gene30932.t1 |
| chr2.2 | CDS | 5646792 | 5647013 | 5646792 | ID=cds.MS.gene30932.t1;Parent=MS.gene30932.t1 |
| chr2.2 | exon | 5646368 | 5646693 | 5646368 | ID=MS.gene30932.t1.exon4;Parent=MS.gene30932.t1 |
| chr2.2 | CDS | 5646368 | 5646693 | 5646368 | ID=cds.MS.gene30932.t1;Parent=MS.gene30932.t1 |
| chr2.2 | exon | 5646032 | 5646161 | 5646032 | ID=MS.gene30932.t1.exon5;Parent=MS.gene30932.t1 |
| chr2.2 | CDS | 5646032 | 5646161 | 5646032 | ID=cds.MS.gene30932.t1;Parent=MS.gene30932.t1 |
| chr2.2 | exon | 5645610 | 5645906 | 5645610 | ID=MS.gene30932.t1.exon6;Parent=MS.gene30932.t1 |
| chr2.2 | CDS | 5645610 | 5645906 | 5645610 | ID=cds.MS.gene30932.t1;Parent=MS.gene30932.t1 |
| chr2.2 | exon | 5644860 | 5645051 | 5644860 | ID=MS.gene30932.t1.exon7;Parent=MS.gene30932.t1 |
| chr2.2 | CDS | 5644860 | 5645051 | 5644860 | ID=cds.MS.gene30932.t1;Parent=MS.gene30932.t1 |
| Gene Sequence |
| Protein sequence |
