Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45469.t1 | XP_003597321.2 | 94.1 | 508 | 29 | 1 | 1 | 508 | 1 | 507 | 4.50E-271 | 943.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45469.t1 | Q9FN89 | 68.6 | 513 | 143 | 6 | 1 | 507 | 2 | 502 | 1.9e-193 | 676.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45469.t1 | G7IHK9 | 94.1 | 508 | 29 | 1 | 1 | 508 | 1 | 507 | 3.3e-271 | 943.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene45469 | 0.832552 | 8.86E-56 | -1.69E-46 |
| MS.gene049222 | MS.gene45469 | 0.831548 | 1.57E-55 | -1.69E-46 |
| MS.gene049356 | MS.gene45469 | 0.863313 | 2.72E-64 | -1.69E-46 |
| MS.gene049369 | MS.gene45469 | 0.865963 | 4.03E-65 | -1.69E-46 |
| MS.gene049396 | MS.gene45469 | 0.856264 | 3.62E-62 | -1.69E-46 |
| MS.gene049488 | MS.gene45469 | 0.810577 | 1.08E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene45469 | 0.849444 | 3.22E-60 | -1.69E-46 |
| MS.gene049805 | MS.gene45469 | 0.868322 | 7.11E-66 | -1.69E-46 |
| MS.gene050538 | MS.gene45469 | 0.806328 | 8.68E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene45469 | 0.858574 | 7.50E-63 | -1.69E-46 |
| MS.gene050625 | MS.gene45469 | 0.80082 | 1.20E-48 | -1.69E-46 |
| MS.gene050670 | MS.gene45469 | 0.878185 | 3.45E-69 | -1.69E-46 |
| MS.gene050747 | MS.gene45469 | 0.881445 | 2.39E-70 | -1.69E-46 |
| MS.gene050772 | MS.gene45469 | 0.846491 | 2.10E-59 | -1.69E-46 |
| MS.gene05080 | MS.gene45469 | 0.814776 | 1.30E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene45469 | 0.868542 | 6.04E-66 | -1.69E-46 |
| MS.gene05105 | MS.gene45469 | 0.847157 | 1.38E-59 | -1.69E-46 |
| MS.gene051387 | MS.gene45469 | 0.859794 | 3.23E-63 | -1.69E-46 |
| MS.gene051438 | MS.gene45469 | 0.849942 | 2.34E-60 | -1.69E-46 |
| MS.gene051525 | MS.gene45469 | 0.819627 | 1.05E-52 | -1.69E-46 |
| MS.gene051666 | MS.gene45469 | 0.854133 | 1.51E-61 | -1.69E-46 |
| MS.gene051838 | MS.gene45469 | 0.847607 | 1.04E-59 | -1.69E-46 |
| MS.gene051874 | MS.gene45469 | 0.812704 | 3.71E-51 | -1.69E-46 |
| MS.gene051941 | MS.gene45469 | 0.807665 | 4.52E-50 | -1.69E-46 |
| MS.gene052136 | MS.gene45469 | 0.813101 | 3.04E-51 | -1.69E-46 |
| MS.gene052164 | MS.gene45469 | 0.813062 | 3.10E-51 | -1.69E-46 |
| MS.gene052188 | MS.gene45469 | 0.819897 | 9.12E-53 | -1.69E-46 |
| MS.gene052253 | MS.gene45469 | 0.811695 | 6.16E-51 | -1.69E-46 |
| MS.gene052346 | MS.gene45469 | 0.830983 | 2.16E-55 | -1.69E-46 |
| MS.gene05240 | MS.gene45469 | -0.803118 | 4.06E-49 | -1.69E-46 |
| MS.gene052414 | MS.gene45469 | 0.87639 | 1.45E-68 | -1.69E-46 |
| MS.gene052421 | MS.gene45469 | 0.892168 | 2.04E-74 | -1.69E-46 |
| MS.gene052501 | MS.gene45469 | 0.862427 | 5.11E-64 | -1.69E-46 |
| MS.gene052503 | MS.gene45469 | 0.839802 | 1.27E-57 | -1.69E-46 |
| MS.gene052505 | MS.gene45469 | 0.859835 | 3.14E-63 | -1.69E-46 |
| MS.gene052615 | MS.gene45469 | 0.805895 | 1.07E-49 | -1.69E-46 |
| MS.gene052823 | MS.gene45469 | 0.836719 | 7.94E-57 | -1.69E-46 |
| MS.gene052825 | MS.gene45469 | 0.830909 | 2.25E-55 | -1.69E-46 |
| MS.gene052982 | MS.gene45469 | 0.83352 | 5.09E-56 | -1.69E-46 |
| MS.gene053103 | MS.gene45469 | 0.822888 | 1.86E-53 | -1.69E-46 |
| MS.gene053104 | MS.gene45469 | 0.809222 | 2.10E-50 | -1.69E-46 |
| MS.gene053207 | MS.gene45469 | 0.806606 | 7.58E-50 | -1.69E-46 |
| MS.gene053213 | MS.gene45469 | 0.813379 | 2.64E-51 | -1.69E-46 |
| MS.gene053286 | MS.gene45469 | 0.804224 | 2.39E-49 | -1.69E-46 |
| MS.gene053436 | MS.gene45469 | 0.841581 | 4.36E-58 | -1.69E-46 |
| MS.gene053449 | MS.gene45469 | 0.831111 | 2.01E-55 | -1.69E-46 |
| MS.gene053574 | MS.gene45469 | 0.864748 | 9.73E-65 | -1.69E-46 |
| MS.gene053579 | MS.gene45469 | 0.80769 | 4.47E-50 | -1.69E-46 |
| MS.gene053626 | MS.gene45469 | 0.849868 | 2.45E-60 | -1.69E-46 |
| MS.gene053632 | MS.gene45469 | 0.81842 | 1.98E-52 | -1.69E-46 |
| MS.gene053758 | MS.gene45469 | 0.803807 | 2.92E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene45469 | 0.813408 | 2.60E-51 | -1.69E-46 |
| MS.gene053873 | MS.gene45469 | 0.826158 | 3.16E-54 | -1.69E-46 |
| MS.gene053912 | MS.gene45469 | 0.870965 | 9.79E-67 | -1.69E-46 |
| MS.gene053916 | MS.gene45469 | 0.851028 | 1.16E-60 | -1.69E-46 |
| MS.gene054123 | MS.gene45469 | 0.816098 | 6.59E-52 | -1.69E-46 |
| MS.gene054408 | MS.gene45469 | 0.824177 | 9.29E-54 | -1.69E-46 |
| MS.gene054742 | MS.gene45469 | -0.810195 | 1.30E-50 | -1.69E-46 |
| MS.gene054927 | MS.gene45469 | 0.838812 | 2.30E-57 | -1.69E-46 |
| MS.gene05494 | MS.gene45469 | 0.808072 | 3.71E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene45469 | 0.883147 | 5.74E-71 | -1.69E-46 |
| MS.gene055116 | MS.gene45469 | 0.837578 | 4.78E-57 | -1.69E-46 |
| MS.gene055224 | MS.gene45469 | 0.826571 | 2.52E-54 | -1.69E-46 |
| MS.gene055289 | MS.gene45469 | 0.822563 | 2.22E-53 | -1.69E-46 |
| MS.gene055369 | MS.gene45469 | 0.829258 | 5.69E-55 | -1.69E-46 |
| MS.gene055486 | MS.gene45469 | 0.811607 | 6.43E-51 | -1.69E-46 |
| MS.gene055539 | MS.gene45469 | 0.83443 | 3.01E-56 | -1.69E-46 |
| MS.gene055722 | MS.gene45469 | 0.806693 | 7.27E-50 | -1.69E-46 |
| MS.gene055741 | MS.gene45469 | 0.862989 | 3.43E-64 | -1.69E-46 |
| MS.gene055744 | MS.gene45469 | 0.863076 | 3.22E-64 | -1.69E-46 |
| MS.gene055909 | MS.gene45469 | 0.882371 | 1.10E-70 | -1.69E-46 |
| MS.gene055911 | MS.gene45469 | 0.879551 | 1.14E-69 | -1.69E-46 |
| MS.gene055941 | MS.gene45469 | 0.809989 | 1.44E-50 | -1.69E-46 |
| MS.gene056040 | MS.gene45469 | 0.810879 | 9.25E-51 | -1.69E-46 |
| MS.gene056166 | MS.gene45469 | 0.85323 | 2.74E-61 | -1.69E-46 |
| MS.gene056407 | MS.gene45469 | 0.807615 | 4.64E-50 | -1.69E-46 |
| MS.gene056422 | MS.gene45469 | 0.829404 | 5.25E-55 | -1.69E-46 |
| MS.gene056487 | MS.gene45469 | 0.810556 | 1.09E-50 | -1.69E-46 |
| MS.gene056511 | MS.gene45469 | 0.892976 | 9.65E-75 | -1.69E-46 |
| MS.gene056514 | MS.gene45469 | 0.852939 | 3.32E-61 | -1.69E-46 |
| MS.gene05664 | MS.gene45469 | 0.871857 | 4.96E-67 | -1.69E-46 |
| MS.gene05666 | MS.gene45469 | 0.864497 | 1.17E-64 | -1.69E-46 |
| MS.gene057019 | MS.gene45469 | 0.829097 | 6.23E-55 | -1.69E-46 |
| MS.gene057076 | MS.gene45469 | 0.841932 | 3.52E-58 | -1.69E-46 |
| MS.gene057086 | MS.gene45469 | 0.814368 | 1.60E-51 | -1.69E-46 |
| MS.gene057124 | MS.gene45469 | 0.843265 | 1.56E-58 | -1.69E-46 |
| MS.gene057146 | MS.gene45469 | 0.810371 | 1.19E-50 | -1.69E-46 |
| MS.gene05735 | MS.gene45469 | 0.814003 | 1.92E-51 | -1.69E-46 |
| MS.gene057396 | MS.gene45469 | 0.807134 | 5.86E-50 | -1.69E-46 |
| MS.gene057416 | MS.gene45469 | 0.842129 | 3.12E-58 | -1.69E-46 |
| MS.gene057658 | MS.gene45469 | 0.8013 | 9.61E-49 | -1.69E-46 |
| MS.gene057734 | MS.gene45469 | 0.910644 | 1.49E-82 | -1.69E-46 |
| MS.gene057749 | MS.gene45469 | 0.80244 | 5.61E-49 | -1.69E-46 |
| MS.gene057823 | MS.gene45469 | 0.819487 | 1.13E-52 | -1.69E-46 |
| MS.gene057856 | MS.gene45469 | 0.844178 | 8.88E-59 | -1.69E-46 |
| MS.gene05787 | MS.gene45469 | 0.821009 | 5.07E-53 | -1.69E-46 |
| MS.gene058007 | MS.gene45469 | 0.86944 | 3.09E-66 | -1.69E-46 |
| MS.gene058019 | MS.gene45469 | 0.827864 | 1.24E-54 | -1.69E-46 |
| MS.gene058075 | MS.gene45469 | 0.849564 | 2.98E-60 | -1.69E-46 |
| MS.gene058090 | MS.gene45469 | 0.837366 | 5.42E-57 | -1.69E-46 |
| MS.gene058120 | MS.gene45469 | 0.854559 | 1.14E-61 | -1.69E-46 |
| MS.gene058130 | MS.gene45469 | 0.815558 | 8.69E-52 | -1.69E-46 |
| MS.gene058376 | MS.gene45469 | 0.849027 | 4.21E-60 | -1.69E-46 |
| MS.gene058444 | MS.gene45469 | 0.818904 | 1.54E-52 | -1.69E-46 |
| MS.gene058700 | MS.gene45469 | 0.861071 | 1.33E-63 | -1.69E-46 |
| MS.gene058838 | MS.gene45469 | 0.832979 | 6.94E-56 | -1.69E-46 |
| MS.gene058928 | MS.gene45469 | 0.817587 | 3.05E-52 | -1.69E-46 |
| MS.gene058948 | MS.gene45469 | 0.853086 | 3.01E-61 | -1.69E-46 |
| MS.gene05934 | MS.gene45469 | 0.816192 | 6.28E-52 | -1.69E-46 |
| MS.gene059366 | MS.gene45469 | 0.811241 | 7.72E-51 | -1.69E-46 |
| MS.gene059367 | MS.gene45469 | 0.807178 | 5.74E-50 | -1.69E-46 |
| MS.gene059368 | MS.gene45469 | 0.828512 | 8.63E-55 | -1.69E-46 |
| MS.gene059420 | MS.gene45469 | 0.814893 | 1.22E-51 | -1.69E-46 |
| MS.gene059455 | MS.gene45469 | 0.837953 | 3.83E-57 | -1.69E-46 |
| MS.gene059667 | MS.gene45469 | 0.841755 | 3.92E-58 | -1.69E-46 |
| MS.gene059674 | MS.gene45469 | 0.840958 | 6.35E-58 | -1.69E-46 |
| MS.gene059688 | MS.gene45469 | 0.84206 | 3.26E-58 | -1.69E-46 |
| MS.gene059692 | MS.gene45469 | 0.811856 | 5.68E-51 | -1.69E-46 |
| MS.gene059695 | MS.gene45469 | 0.817162 | 3.80E-52 | -1.69E-46 |
| MS.gene059711 | MS.gene45469 | 0.816482 | 5.41E-52 | -1.69E-46 |
| MS.gene059718 | MS.gene45469 | 0.803515 | 3.36E-49 | -1.69E-46 |
| MS.gene059807 | MS.gene45469 | 0.858411 | 8.39E-63 | -1.69E-46 |
| MS.gene059870 | MS.gene45469 | 0.864336 | 1.31E-64 | -1.69E-46 |
| MS.gene060372 | MS.gene45469 | 0.869233 | 3.61E-66 | -1.69E-46 |
| MS.gene060403 | MS.gene45469 | 0.851363 | 9.32E-61 | -1.69E-46 |
| MS.gene060804 | MS.gene45469 | 0.829786 | 4.24E-55 | -1.69E-46 |
| MS.gene060835 | MS.gene45469 | 0.862766 | 4.02E-64 | -1.69E-46 |
| MS.gene060837 | MS.gene45469 | 0.853499 | 2.30E-61 | -1.69E-46 |
| MS.gene06092 | MS.gene45469 | 0.812753 | 3.62E-51 | -1.69E-46 |
| MS.gene06097 | MS.gene45469 | 0.876742 | 1.10E-68 | -1.69E-46 |
| MS.gene061041 | MS.gene45469 | 0.845466 | 3.99E-59 | -1.69E-46 |
| MS.gene061154 | MS.gene45469 | 0.832974 | 6.96E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene45469 | MS.gene90199 | PPI |
| MS.gene45469 | MS.gene02178 | PPI |
| MS.gene45469 | MS.gene01192 | PPI |
| MS.gene45469 | MS.gene053559 | PPI |
| MS.gene45469 | MS.gene028458 | PPI |
| MS.gene45469 | MS.gene071898 | PPI |
| MS.gene45469 | MS.gene068045 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45469.t1 | MTR_2g096330 | 96.457 | 508 | 17 | 1 | 1 | 508 | 1 | 507 | 0.0 | 1008 |
| MS.gene45469.t1 | MTR_2g009270 | 65.877 | 422 | 142 | 2 | 88 | 508 | 102 | 522 | 0.0 | 577 |
| MS.gene45469.t1 | MTR_4g094130 | 66.832 | 404 | 133 | 1 | 102 | 505 | 110 | 512 | 0.0 | 572 |
| MS.gene45469.t1 | MTR_4g094130 | 68.052 | 385 | 122 | 1 | 121 | 505 | 1 | 384 | 0.0 | 554 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45469.t1 | AT5G59750 | 69.201 | 513 | 140 | 6 | 1 | 507 | 2 | 502 | 0.0 | 710 |
| MS.gene45469.t1 | AT5G59750 | 64.899 | 547 | 140 | 7 | 1 | 507 | 2 | 536 | 0.0 | 693 |
| MS.gene45469.t1 | AT5G59750 | 66.594 | 458 | 135 | 6 | 1 | 452 | 2 | 447 | 0.0 | 601 |
| MS.gene45469.t1 | AT5G64300 | 67.067 | 416 | 136 | 1 | 90 | 505 | 112 | 526 | 0.0 | 588 |
| MS.gene45469.t1 | AT2G22450 | 58.418 | 392 | 154 | 3 | 92 | 483 | 92 | 474 | 2.64e-159 | 461 |
Find 117 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAAATTTGTTGGTCTAAA+AGG | 0.157959 | 2.1:-7111935 | MS.gene45469:CDS |
| TGTTTAACTGGGGATATATT+TGG | 0.172347 | 2.1:-7112794 | MS.gene45469:CDS |
| TGTCACATCTTCCTACTAAA+TGG | 0.198867 | 2.1:-7113056 | MS.gene45469:CDS |
| TTCCTTGGCGTAATGCATTA+AGG | 0.202150 | 2.1:+7114190 | None:intergenic |
| TATTGTTAGGATGCAAAATA+TGG | 0.229542 | 2.1:-7113591 | MS.gene45469:intron |
| ACCAAAATGGGTCATATCTA+TGG | 0.241057 | 2.1:-7111830 | MS.gene45469:CDS |
| ACCTTGATCTTGCAAATTAT+AGG | 0.252533 | 2.1:+7112640 | None:intergenic |
| GAACAACAAGGTGAGAAATT+TGG | 0.257120 | 2.1:-7114421 | MS.gene45469:CDS |
| CCCATAGATATGACCCATTT+TGG | 0.264968 | 2.1:+7111829 | None:intergenic |
| TACTGAGGCTTCTGTAGATT+TGG | 0.288351 | 2.1:-7113421 | MS.gene45469:CDS |
| GTCCAAGCAAACATAGATTT+GGG | 0.316048 | 2.1:-7112608 | MS.gene45469:CDS |
| AGTCCAAGCAAACATAGATT+TGG | 0.316830 | 2.1:-7112609 | MS.gene45469:CDS |
| GTACATTCAGAATGTTTAAC+TGG | 0.320458 | 2.1:-7112806 | MS.gene45469:CDS |
| TTTGTTGGTCTAAAAGGATA+TGG | 0.325230 | 2.1:-7111929 | MS.gene45469:CDS |
| ATCTATGGGTCTGATATATA+AGG | 0.326183 | 2.1:-7111815 | None:intergenic |
| CGCTTGTTTGCTTCAGTGAT+TGG | 0.328210 | 2.1:+7111872 | None:intergenic |
| CCACCATTTCTATACTTAAG+AGG | 0.347032 | 2.1:+7113465 | None:intergenic |
| ATAAAATATGTACCTTGAAT+TGG | 0.360216 | 2.1:+7114573 | None:intergenic |
| TCCTTGGCGTAATGCATTAA+GGG | 0.365334 | 2.1:+7114191 | None:intergenic |
| TGATGTTGAAGATGGAAATA+TGG | 0.367048 | 2.1:-7113352 | MS.gene45469:CDS |
| TCGGAGAAAACGAGAGAAAT+TGG | 0.372980 | 2.1:-7113094 | MS.gene45469:CDS |
| TACTCCTTAGAGGGACAATC+TGG | 0.387555 | 2.1:+7114231 | None:intergenic |
| TTCTGTAGATTTGGTTGCAT+TGG | 0.388739 | 2.1:-7113412 | MS.gene45469:CDS |
| GTAGATTTGGTTGCATTGGC+AGG | 0.388977 | 2.1:-7113408 | MS.gene45469:CDS |
| GTCACATCTTCCTACTAAAT+GGG | 0.389348 | 2.1:-7113055 | MS.gene45469:CDS |
| AAATCAGTTATTGAAACAAT+TGG | 0.389681 | 2.1:+7113285 | None:intergenic |
| ACTCATCATAGTGTAAGATT+TGG | 0.392279 | 2.1:-7114450 | MS.gene45469:CDS |
| TCATAGCCAAATCTAGTTGC+TGG | 0.393601 | 2.1:+7112750 | None:intergenic |
| TTTCAATAACTGATTTGATA+AGG | 0.394612 | 2.1:-7113278 | MS.gene45469:intron |
| AGAGCTGTGAGAACAGAAAA+TGG | 0.400675 | 2.1:+7113378 | None:intergenic |
| AACAATCCAGCAAAATTTGT+TGG | 0.402087 | 2.1:-7111944 | MS.gene45469:CDS |
| TTTCCTCTTAAGTATAGAAA+TGG | 0.404838 | 2.1:-7113468 | MS.gene45469:CDS |
| AATTCTAGCTAACCTTTCCT+TGG | 0.419158 | 2.1:+7114175 | None:intergenic |
| AAGTCCTCGGATTTCGACTC+TGG | 0.423258 | 2.1:+7113510 | None:intergenic |
| TGATCCAGATTGTCCCTCTA+AGG | 0.424415 | 2.1:-7114235 | MS.gene45469:CDS |
| CTGTGGCCAGCAACTAGATT+TGG | 0.426292 | 2.1:-7112756 | MS.gene45469:CDS |
| TGAAATAGACCCCATTTAGT+AGG | 0.431751 | 2.1:+7113045 | None:intergenic |
| GAAGGAAGAGGCATTGGGTT+AGG | 0.438985 | 2.1:-7112677 | MS.gene45469:CDS |
| AATGGAAGAGTACTCCTTAG+AGG | 0.439818 | 2.1:+7114221 | None:intergenic |
| TTCTCACCTTGTTGTTCCAC+AGG | 0.446496 | 2.1:+7114427 | None:intergenic |
| ACCCCAAATCTATGTTTGCT+TGG | 0.446947 | 2.1:+7112606 | None:intergenic |
| GAATCCTCTTCTTCAGTGTC+AGG | 0.447824 | 2.1:+7113731 | None:intergenic |
| TGTTGAAGGGAATCTTATAA+AGG | 0.455110 | 2.1:-7113870 | MS.gene45469:CDS |
| TTTATGATTAAACATGGATC+AGG | 0.455192 | 2.1:-7113815 | MS.gene45469:CDS |
| AGCGTTACCTAGAAACAAAA+AGG | 0.456329 | 2.1:-7111853 | MS.gene45469:CDS |
| GCTGTTGATGCTCGTGAGTA+TGG | 0.457469 | 2.1:-7112581 | MS.gene45469:CDS |
| ATGAAATTGATTGAAGAAGC+TGG | 0.460792 | 2.1:-7112731 | MS.gene45469:CDS |
| TGCATTAAGGGCATGCTCAA+TGG | 0.463896 | 2.1:+7114203 | None:intergenic |
| GATGAAAACAACAATGTTGA+AGG | 0.466495 | 2.1:-7113884 | MS.gene45469:CDS |
| GGTCATGAAGGAAGAGGCAT+TGG | 0.482864 | 2.1:-7112683 | MS.gene45469:CDS |
| TTGGTTGCTTAGGGAAACAT+AGG | 0.482975 | 2.1:-7112854 | MS.gene45469:intron |
| AATCATAAATGCCACATCCT+TGG | 0.486532 | 2.1:+7113829 | None:intergenic |
| GCCTATAATTTGCAAGATCA+AGG | 0.487252 | 2.1:-7112641 | MS.gene45469:CDS |
| CCACTGTGATAGTGAAAGTA+GGG | 0.490607 | 2.1:+7113702 | None:intergenic |
| GGAGTAATTGTGTATCTTAG+AGG | 0.493061 | 2.1:-7112704 | MS.gene45469:CDS |
| ATAGAAATGGTGGAGTGCTT+AGG | 0.494926 | 2.1:-7113455 | MS.gene45469:CDS |
| CCCACGTCATCACCAATTCA+AGG | 0.497388 | 2.1:-7114585 | MS.gene45469:intron |
| TGAGTATGGCATTGGTGCCC+AGG | 0.497742 | 2.1:-7112567 | MS.gene45469:intron |
| ACGTGGGAAATCAAAGGACT+AGG | 0.503550 | 2.1:+7114601 | None:intergenic |
| GCTCTTGTTGATGTTGAAGA+TGG | 0.508607 | 2.1:-7113360 | MS.gene45469:CDS |
| TTGATTGAAGAAGCTGGAAG+AGG | 0.514495 | 2.1:-7112725 | MS.gene45469:CDS |
| TGGAACTTCCACGGGTGTAT+CGG | 0.515831 | 2.1:-7113571 | MS.gene45469:CDS |
| CCTCTTAAGTATAGAAATGG+TGG | 0.517951 | 2.1:-7113465 | MS.gene45469:CDS |
| GGTGGAGTGCTTAGGAGAGC+TGG | 0.520674 | 2.1:-7113447 | MS.gene45469:CDS |
| TGTTATAGTTCAAAGTTGGA+TGG | 0.520999 | 2.1:-7113015 | MS.gene45469:CDS |
| GCTTAGGGAAACATAGGAGA+TGG | 0.523904 | 2.1:-7112848 | MS.gene45469:intron |
| ATATTGTTATAGTTCAAAGT+TGG | 0.524855 | 2.1:-7113019 | MS.gene45469:CDS |
| GGGAATGAAGCAGAGTCCAT+AGG | 0.530818 | 2.1:+7114622 | None:intergenic |
| GGATATGGTTTAGCTGTGAC+AGG | 0.532359 | 2.1:-7111914 | MS.gene45469:CDS |
| GCAAAATATGGAACTTCCAC+GGG | 0.535098 | 2.1:-7113579 | MS.gene45469:CDS |
| ACATTGGAGTTCGAACTATG+AGG | 0.535750 | 2.1:-7111976 | MS.gene45469:CDS |
| GTCACCTGACACTGAAGAAG+AGG | 0.544346 | 2.1:-7113735 | MS.gene45469:CDS |
| CCAAAATGGGTCATATCTAT+GGG | 0.544969 | 2.1:-7111829 | MS.gene45469:CDS |
| TATTTATTCAAAGCTTGCAT+CGG | 0.545583 | 2.1:-7114482 | MS.gene45469:intron |
| GGATCAGGAATAGTTTCTGT+TGG | 0.545719 | 2.1:-7113800 | MS.gene45469:CDS |
| TCAGTGATTGGTGTTAGCAC+AGG | 0.547814 | 2.1:+7111884 | None:intergenic |
| TGAGCATGTGGCTGTTGTAA+AGG | 0.560783 | 2.1:-7112989 | MS.gene45469:intron |
| CTTAGAGGTCATGAAGGAAG+AGG | 0.564446 | 2.1:-7112689 | MS.gene45469:CDS |
| CGTGGGAAATCAAAGGACTA+GGG | 0.566760 | 2.1:+7114602 | None:intergenic |
| TCTTGTTAGTACCAAGGATG+TGG | 0.568018 | 2.1:-7113840 | MS.gene45469:CDS |
| TGCAAAATATGGAACTTCCA+CGG | 0.569828 | 2.1:-7113580 | MS.gene45469:CDS |
| TAATGCATTACGCCAAGGAA+AGG | 0.571418 | 2.1:-7114187 | MS.gene45469:intron |
| TTCTGTTGGCATGAAAGAAG+AGG | 0.576477 | 2.1:-7113786 | MS.gene45469:CDS |
| GCCACTGTGATAGTGAAAGT+AGG | 0.578231 | 2.1:+7113701 | None:intergenic |
| TTCCACGGGTGTATCGGCTG+CGG | 0.588754 | 2.1:-7113565 | MS.gene45469:CDS |
| ATGGAAGAGTACTCCTTAGA+GGG | 0.590392 | 2.1:+7114222 | None:intergenic |
| GTCATGAAGGAAGAGGCATT+GGG | 0.591268 | 2.1:-7112682 | MS.gene45469:CDS |
| TTCTTTGTAAGTGAAGCTGA+AGG | 0.595370 | 2.1:-7114258 | MS.gene45469:CDS |
| ATGAAAACAACAATGTTGAA+GGG | 0.595372 | 2.1:-7113883 | MS.gene45469:CDS |
| TCAGTGTCAGGTGACATAAG+AGG | 0.596959 | 2.1:+7113743 | None:intergenic |
| TACATTCAGAATGTTTAACT+GGG | 0.597083 | 2.1:-7112805 | MS.gene45469:CDS |
| CTTAGGGAAACATAGGAGAT+GGG | 0.597548 | 2.1:-7112847 | MS.gene45469:intron |
| GCCCTTAATGCATTACGCCA+AGG | 0.607779 | 2.1:-7114192 | MS.gene45469:CDS |
| GATGCTCGTGAGTATGGCAT+TGG | 0.608440 | 2.1:-7112575 | MS.gene45469:CDS |
| GTGTATCTTAGAGGTCATGA+AGG | 0.608731 | 2.1:-7112695 | MS.gene45469:CDS |
| GGGATATATTTGGATCAGCT+CGG | 0.611108 | 2.1:-7112784 | MS.gene45469:CDS |
| GTGGCATTTATGATTAAACA+TGG | 0.613664 | 2.1:-7113821 | MS.gene45469:CDS |
| TCCGAGGACTTAAGAAAACC+AGG | 0.619694 | 2.1:-7113498 | MS.gene45469:CDS |
| ATCCGCAGCCGATACACCCG+TGG | 0.629180 | 2.1:+7113563 | None:intergenic |
| ATTTGGCCTGTGGAACAACA+AGG | 0.634139 | 2.1:-7114433 | MS.gene45469:CDS |
| ATAGTGTAAGATTTGGCCTG+TGG | 0.635119 | 2.1:-7114443 | MS.gene45469:CDS |
| TCACATCTTCCTACTAAATG+GGG | 0.639715 | 2.1:-7113054 | MS.gene45469:CDS |
| AGCATCTCTTGTTAGTACCA+AGG | 0.640073 | 2.1:-7113846 | MS.gene45469:CDS |
| GAAGACGTGTTTGATGATAG+TGG | 0.645204 | 2.1:-7114363 | MS.gene45469:CDS |
| GTGATGACGTGGGAAATCAA+AGG | 0.652787 | 2.1:+7114595 | None:intergenic |
| ACCTTGAATTGGTGATGACG+TGG | 0.653143 | 2.1:+7114584 | None:intergenic |
| GGATCAGCTCGGTGTGACTG+TGG | 0.657027 | 2.1:-7112773 | MS.gene45469:CDS |
| TCCAAGCAAACATAGATTTG+GGG | 0.659816 | 2.1:-7112607 | MS.gene45469:CDS |
| CACTGTGATAGTGAAAGTAG+GGG | 0.669060 | 2.1:+7113703 | None:intergenic |
| TGTCAGGTGACATAAGAGGA+AGG | 0.670240 | 2.1:+7113747 | None:intergenic |
| ATCTCCAGAGTCGAAATCCG+AGG | 0.671355 | 2.1:-7113514 | MS.gene45469:CDS |
| TAGGAGAGCTGGTCATACTG+AGG | 0.694929 | 2.1:-7113436 | MS.gene45469:CDS |
| ACATTCAGAATGTTTAACTG+GGG | 0.696460 | 2.1:-7112804 | MS.gene45469:CDS |
| GTTGGATGGAACTGAGCATG+TGG | 0.707210 | 2.1:-7113001 | MS.gene45469:CDS |
| CCTTGAATTGGTGATGACGT+GGG | 0.735027 | 2.1:+7114585 | None:intergenic |
| GCTGTGAGAACAGAAAATGG+TGG | 0.741200 | 2.1:+7113381 | None:intergenic |
| CCCTACTTTCACTATCACAG+TGG | 0.750731 | 2.1:-7113702 | MS.gene45469:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCAAAAAAAATATTGATAT+AGG | + | chr2.1:7112513-7112532 | None:intergenic | 10.0% |
| !!! | GTTTTTGTTTTTTTAAAATT+CGG | + | chr2.1:7114011-7114030 | None:intergenic | 10.0% |
| !! | TCTGAATTATAATTTCTTAT+TGG | - | chr2.1:7113563-7113582 | MS.gene45469:CDS | 15.0% |
| !! | TTGTGTAATATATTATTGTT+AGG | - | chr2.1:7112832-7112851 | MS.gene45469:CDS | 15.0% |
| !! | AAATCAGTTATTGAAACAAT+TGG | + | chr2.1:7113154-7113173 | None:intergenic | 20.0% |
| !! | ATAAAATATGTACCTTGAAT+TGG | + | chr2.1:7111866-7111885 | None:intergenic | 20.0% |
| !! | ATATTGTTATAGTTCAAAGT+TGG | - | chr2.1:7113417-7113436 | MS.gene45469:CDS | 20.0% |
| !! | ATCTACTAATCAACATTTAT+TGG | + | chr2.1:7114189-7114208 | None:intergenic | 20.0% |
| !! | GAAATATTGCAAATTATACA+AGG | + | chr2.1:7114366-7114385 | None:intergenic | 20.0% |
| !! | GATTTGAAGAAAAATGAAAA+TGG | - | chr2.1:7112097-7112116 | MS.gene45469:intron | 20.0% |
| !!! | AATGCTAAGTTTTTTAAACT+GGG | + | chr2.1:7113118-7113137 | None:intergenic | 20.0% |
| !!! | GATGACATTTTATTAAGTAA+TGG | - | chr2.1:7112464-7112483 | MS.gene45469:intron | 20.0% |
| !!! | TGTAAAACATTTTTGAATGT+TGG | - | chr2.1:7114292-7114311 | MS.gene45469:CDS | 20.0% |
| !!! | TTTCAATAACTGATTTGATA+AGG | - | chr2.1:7113158-7113177 | MS.gene45469:intron | 20.0% |
| ! | ATGAAAACAACAATGTTGAA+GGG | - | chr2.1:7112553-7112572 | MS.gene45469:intron | 25.0% |
| ! | CAGTTTAAAAAACTTAGCAT+TGG | - | chr2.1:7113117-7113136 | MS.gene45469:intron | 25.0% |
| ! | GATTTGTATTCACTAATACT+AGG | + | chr2.1:7114339-7114358 | None:intergenic | 25.0% |
| ! | TAATGATCAACTAAAGTAGA+TGG | - | chr2.1:7113943-7113962 | MS.gene45469:intron | 25.0% |
| ! | TACATTCAGAATGTTTAACT+GGG | - | chr2.1:7113631-7113650 | MS.gene45469:intron | 25.0% |
| ! | TACTAATCAACATTTATTGG+TGG | + | chr2.1:7114186-7114205 | None:intergenic | 25.0% |
| ! | TATATGCAACAATCTACATT+AGG | + | chr2.1:7112789-7112808 | None:intergenic | 25.0% |
| ! | TATTGTTAGGATGCAAAATA+TGG | - | chr2.1:7112845-7112864 | MS.gene45469:CDS | 25.0% |
| ! | TATTTATTCAAAGCTTGCAT+CGG | - | chr2.1:7111954-7111973 | MS.gene45469:CDS | 25.0% |
| ! | TTTATGATTAAACATGGATC+AGG | - | chr2.1:7112621-7112640 | MS.gene45469:CDS | 25.0% |
| ! | TTTCCTCTTAAGTATAGAAA+TGG | - | chr2.1:7112968-7112987 | MS.gene45469:intron | 25.0% |
| !! | AATTTCTTATTGGTTGCTTA+GGG | - | chr2.1:7113573-7113592 | MS.gene45469:CDS | 25.0% |
| !! | TAATTTCTTATTGGTTGCTT+AGG | - | chr2.1:7113572-7113591 | MS.gene45469:CDS | 25.0% |
| !!! | AATTTGGCTTTTTATGCTAT+TGG | - | chr2.1:7112031-7112050 | MS.gene45469:intron | 25.0% |
| !!! | ATTTGGCTTTTTATGCTATT+GGG | - | chr2.1:7112032-7112051 | MS.gene45469:intron | 25.0% |
| !!! | CAACTTATAATAGCTTGTTT+TGG | + | chr2.1:7114412-7114431 | None:intergenic | 25.0% |
| !!! | CAATGCTAAGTTTTTTAAAC+TGG | + | chr2.1:7113119-7113138 | None:intergenic | 25.0% |
| !!! | TACTATTCTTTAGTTTGCTT+AGG | + | chr2.1:7113539-7113558 | None:intergenic | 25.0% |
| AACAATCCAGCAAAATTTGT+TGG | - | chr2.1:7114492-7114511 | MS.gene45469:intron | 30.0% | |
| ACATTCAGAATGTTTAACTG+GGG | - | chr2.1:7113632-7113651 | MS.gene45469:intron | 30.0% | |
| ACCTTGATCTTGCAAATTAT+AGG | + | chr2.1:7113799-7113818 | None:intergenic | 30.0% | |
| ACTAAAGTAGATGGTATGAT+TGG | - | chr2.1:7113952-7113971 | MS.gene45469:intron | 30.0% | |
| ACTCATCATAGTGTAAGATT+TGG | - | chr2.1:7111986-7112005 | MS.gene45469:CDS | 30.0% | |
| AGAAACAAAAAGGACCAAAA+TGG | - | chr2.1:7114593-7114612 | MS.gene45469:CDS | 30.0% | |
| AGTGATTAAAAGATCTAACC+TGG | + | chr2.1:7113890-7113909 | None:intergenic | 30.0% | |
| ATGAAATTGATTGAAGAAGC+TGG | - | chr2.1:7113705-7113724 | MS.gene45469:CDS | 30.0% | |
| GAAACAAAAAGGACCAAAAT+GGG | - | chr2.1:7114594-7114613 | MS.gene45469:CDS | 30.0% | |
| GATGAAAACAACAATGTTGA+AGG | - | chr2.1:7112552-7112571 | MS.gene45469:intron | 30.0% | |
| GTACATTCAGAATGTTTAAC+TGG | - | chr2.1:7113630-7113649 | MS.gene45469:intron | 30.0% | |
| GTGATTAAAAGATCTAACCT+GGG | + | chr2.1:7113889-7113908 | None:intergenic | 30.0% | |
| GTGGCATTTATGATTAAACA+TGG | - | chr2.1:7112615-7112634 | MS.gene45469:CDS | 30.0% | |
| TGAACAATACTTATGCACTT+CGG | - | chr2.1:7114264-7114283 | MS.gene45469:CDS | 30.0% | |
| TGATGTTGAAGATGGAAATA+TGG | - | chr2.1:7113084-7113103 | MS.gene45469:CDS | 30.0% | |
| TGTTATAGTTCAAAGTTGGA+TGG | - | chr2.1:7113421-7113440 | MS.gene45469:CDS | 30.0% | |
| TGTTGAAGGGAATCTTATAA+AGG | - | chr2.1:7112566-7112585 | MS.gene45469:intron | 30.0% | |
| TGTTTAACTGGGGATATATT+TGG | - | chr2.1:7113642-7113661 | MS.gene45469:intron | 30.0% | |
| ! | GATAAATGTGCAGATTTTGA+GGG | - | chr2.1:7114437-7114456 | MS.gene45469:CDS | 30.0% |
| ! | GTGCATAAGTATTGTTCAAT+TGG | + | chr2.1:7114262-7114281 | None:intergenic | 30.0% |
| ! | TGATAAATGTGCAGATTTTG+AGG | - | chr2.1:7114436-7114455 | MS.gene45469:CDS | 30.0% |
| ! | TTATGCTATTGGGTTTTCTA+AGG | - | chr2.1:7112042-7112061 | MS.gene45469:intron | 30.0% |
| ! | TTTAGACCAACAAATTTTGC+TGG | + | chr2.1:7114501-7114520 | None:intergenic | 30.0% |
| ! | TTTGTTGGTCTAAAAGGATA+TGG | - | chr2.1:7114507-7114526 | MS.gene45469:intron | 30.0% |
| !! | GCAAAATTTGTTGGTCTAAA+AGG | - | chr2.1:7114501-7114520 | MS.gene45469:intron | 30.0% |
| !! | TTTTGGTCCTTTTTGTTTCT+AGG | + | chr2.1:7114593-7114612 | None:intergenic | 30.0% |
| AACACGAGTTCAACAAATAG+AGG | + | chr2.1:7111922-7111941 | None:intergenic | 35.0% | |
| AATCATAAATGCCACATCCT+TGG | + | chr2.1:7112610-7112629 | None:intergenic | 35.0% | |
| ACCAAAATGGGTCATATCTA+TGG | - | chr2.1:7114606-7114625 | MS.gene45469:CDS | 35.0% | |
| AGATGGTATGATTGGACTTT+CGG | - | chr2.1:7113960-7113979 | MS.gene45469:intron | 35.0% | |
| AGCGTTACCTAGAAACAAAA+AGG | - | chr2.1:7114583-7114602 | MS.gene45469:intron | 35.0% | |
| AGTCCAAGCAAACATAGATT+TGG | - | chr2.1:7113827-7113846 | MS.gene45469:CDS | 35.0% | |
| CCAAAATGGGTCATATCTAT+GGG | - | chr2.1:7114607-7114626 | MS.gene45469:CDS | 35.0% | |
| CCACCATTTCTATACTTAAG+AGG | + | chr2.1:7112974-7112993 | None:intergenic | 35.0% | |
| CCTCTTAAGTATAGAAATGG+TGG | - | chr2.1:7112971-7112990 | MS.gene45469:intron | 35.0% | |
| CGTTACGTCTAATACATGTT+TGG | - | chr2.1:7112295-7112314 | MS.gene45469:intron | 35.0% | |
| GAACAACAAGGTGAGAAATT+TGG | - | chr2.1:7112015-7112034 | MS.gene45469:intron | 35.0% | |
| GGAGTAATTGTGTATCTTAG+AGG | - | chr2.1:7113732-7113751 | MS.gene45469:CDS | 35.0% | |
| GTCACATCTTCCTACTAAAT+GGG | - | chr2.1:7113381-7113400 | MS.gene45469:CDS | 35.0% | |
| GTCCAAGCAAACATAGATTT+GGG | - | chr2.1:7113828-7113847 | MS.gene45469:CDS | 35.0% | |
| TCACATCTTCCTACTAAATG+GGG | - | chr2.1:7113382-7113401 | MS.gene45469:CDS | 35.0% | |
| TCCAAGCAAACATAGATTTG+GGG | - | chr2.1:7113829-7113848 | MS.gene45469:CDS | 35.0% | |
| TGAAATAGACCCCATTTAGT+AGG | + | chr2.1:7113394-7113413 | None:intergenic | 35.0% | |
| TGCAAAATATGGAACTTCCA+CGG | - | chr2.1:7112856-7112875 | MS.gene45469:intron | 35.0% | |
| TGTCACATCTTCCTACTAAA+TGG | - | chr2.1:7113380-7113399 | MS.gene45469:CDS | 35.0% | |
| TTAAGAGGAAAAACATGACC+TGG | + | chr2.1:7112959-7112978 | None:intergenic | 35.0% | |
| TTAATGTATGTGACGCTTCA+AGG | - | chr2.1:7113317-7113336 | MS.gene45469:CDS | 35.0% | |
| TTCTTTGTAAGTGAAGCTGA+AGG | - | chr2.1:7112178-7112197 | MS.gene45469:intron | 35.0% | |
| ! | AATTCTAGCTAACCTTTCCT+TGG | + | chr2.1:7112264-7112283 | None:intergenic | 35.0% |
| ! | GCCTATAATTTGCAAGATCA+AGG | - | chr2.1:7113795-7113814 | MS.gene45469:CDS | 35.0% |
| ! | TTCTGTAGATTTGGTTGCAT+TGG | - | chr2.1:7113024-7113043 | MS.gene45469:CDS | 35.0% |
| !! | AGCGTCTAACGTTTTTAAGA+GGG | + | chr2.1:7112125-7112144 | None:intergenic | 35.0% |
| !! | TAGCGTCTAACGTTTTTAAG+AGG | + | chr2.1:7112126-7112145 | None:intergenic | 35.0% |
| ACATTGGAGTTCGAACTATG+AGG | - | chr2.1:7114460-7114479 | MS.gene45469:CDS | 40.0% | |
| ACCCCAAATCTATGTTTGCT+TGG | + | chr2.1:7113833-7113852 | None:intergenic | 40.0% | |
| AGAGCTGTGAGAACAGAAAA+TGG | + | chr2.1:7113061-7113080 | None:intergenic | 40.0% | |
| AGCATCTCTTGTTAGTACCA+AGG | - | chr2.1:7112590-7112609 | MS.gene45469:CDS | 40.0% | |
| ATAGTGTAAGATTTGGCCTG+TGG | - | chr2.1:7111993-7112012 | MS.gene45469:intron | 40.0% | |
| CTTAGGGAAACATAGGAGAT+GGG | - | chr2.1:7113589-7113608 | MS.gene45469:intron | 40.0% | |
| GCAAAATATGGAACTTCCAC+GGG | - | chr2.1:7112857-7112876 | MS.gene45469:intron | 40.0% | |
| GCTCTTGTTGATGTTGAAGA+TGG | - | chr2.1:7113076-7113095 | MS.gene45469:CDS | 40.0% | |
| GGATCAGGAATAGTTTCTGT+TGG | - | chr2.1:7112636-7112655 | MS.gene45469:CDS | 40.0% | |
| GGGATATATTTGGATCAGCT+CGG | - | chr2.1:7113652-7113671 | MS.gene45469:intron | 40.0% | |
| GTGTATCTTAGAGGTCATGA+AGG | - | chr2.1:7113741-7113760 | MS.gene45469:CDS | 40.0% | |
| TAATGCATTACGCCAAGGAA+AGG | - | chr2.1:7112249-7112268 | MS.gene45469:intron | 40.0% | |
| TACTGAGGCTTCTGTAGATT+TGG | - | chr2.1:7113015-7113034 | MS.gene45469:CDS | 40.0% | |
| TATGTGACGCTTCAAGGTAT+CGG | - | chr2.1:7113323-7113342 | MS.gene45469:CDS | 40.0% | |
| TCATAGCCAAATCTAGTTGC+TGG | + | chr2.1:7113689-7113708 | None:intergenic | 40.0% | |
| TCCTTGGCGTAATGCATTAA+GGG | + | chr2.1:7112248-7112267 | None:intergenic | 40.0% | |
| TCGGAGAAAACGAGAGAAAT+TGG | - | chr2.1:7113342-7113361 | MS.gene45469:CDS | 40.0% | |
| TCTTGTTAGTACCAAGGATG+TGG | - | chr2.1:7112596-7112615 | MS.gene45469:CDS | 40.0% | |
| TTCCTTGGCGTAATGCATTA+AGG | + | chr2.1:7112249-7112268 | None:intergenic | 40.0% | |
| TTCTGTTGGCATGAAAGAAG+AGG | - | chr2.1:7112650-7112669 | MS.gene45469:CDS | 40.0% | |
| TTGATTGAAGAAGCTGGAAG+AGG | - | chr2.1:7113711-7113730 | MS.gene45469:CDS | 40.0% | |
| TTGGTTGCTTAGGGAAACAT+AGG | - | chr2.1:7113582-7113601 | MS.gene45469:CDS | 40.0% | |
| ! | ATAGAAATGGTGGAGTGCTT+AGG | - | chr2.1:7112981-7113000 | MS.gene45469:intron | 40.0% |
| ! | CACTGTGATAGTGAAAGTAG+GGG | + | chr2.1:7112736-7112755 | None:intergenic | 40.0% |
| ! | CCACTGTGATAGTGAAAGTA+GGG | + | chr2.1:7112737-7112756 | None:intergenic | 40.0% |
| ! | CCCATAGATATGACCCATTT+TGG | + | chr2.1:7114610-7114629 | None:intergenic | 40.0% |
| ! | GAAGACGTGTTTGATGATAG+TGG | - | chr2.1:7112073-7112092 | MS.gene45469:intron | 40.0% |
| !! | AATGGAAGAGTACTCCTTAG+AGG | + | chr2.1:7112218-7112237 | None:intergenic | 40.0% |
| !! | ACATTTATTGGTGGCGAGTT+TGG | + | chr2.1:7114177-7114196 | None:intergenic | 40.0% |
| !! | ACCTGGTTTTCTTAAGTCCT+CGG | + | chr2.1:7112942-7112961 | None:intergenic | 40.0% |
| !! | ATGGAAGAGTACTCCTTAGA+GGG | + | chr2.1:7112217-7112236 | None:intergenic | 40.0% |
| !!! | GCTATTGGGTTTTCTAAGGT+TGG | - | chr2.1:7112046-7112065 | MS.gene45469:intron | 40.0% |
| ACGTGGGAAATCAAAGGACT+AGG | + | chr2.1:7111838-7111857 | None:intergenic | 45.0% | |
| ATTTGGCCTGTGGAACAACA+AGG | - | chr2.1:7112003-7112022 | MS.gene45469:intron | 45.0% | |
| CCCTACTTTCACTATCACAG+TGG | - | chr2.1:7112734-7112753 | MS.gene45469:CDS | 45.0% | |
| CGCTTGTTTGCTTCAGTGAT+TGG | + | chr2.1:7114567-7114586 | None:intergenic | 45.0% | |
| CGTGGGAAATCAAAGGACTA+GGG | + | chr2.1:7111837-7111856 | None:intergenic | 45.0% | |
| CTTAGAGGTCATGAAGGAAG+AGG | - | chr2.1:7113747-7113766 | MS.gene45469:CDS | 45.0% | |
| GAATCCTCTTCTTCAGTGTC+AGG | + | chr2.1:7112708-7112727 | None:intergenic | 45.0% | |
| GCTGTGAGAACAGAAAATGG+TGG | + | chr2.1:7113058-7113077 | None:intergenic | 45.0% | |
| GCTTAGGGAAACATAGGAGA+TGG | - | chr2.1:7113588-7113607 | MS.gene45469:intron | 45.0% | |
| GGATATGGTTTAGCTGTGAC+AGG | - | chr2.1:7114522-7114541 | MS.gene45469:intron | 45.0% | |
| TACTCCTTAGAGGGACAATC+TGG | + | chr2.1:7112208-7112227 | None:intergenic | 45.0% | |
| TCAGTGTCAGGTGACATAAG+AGG | + | chr2.1:7112696-7112715 | None:intergenic | 45.0% | |
| TCCGAGGACTTAAGAAAACC+AGG | - | chr2.1:7112938-7112957 | MS.gene45469:intron | 45.0% | |
| TGAGCATGTGGCTGTTGTAA+AGG | - | chr2.1:7113447-7113466 | MS.gene45469:CDS | 45.0% | |
| TGATCCAGATTGTCCCTCTA+AGG | - | chr2.1:7112201-7112220 | MS.gene45469:intron | 45.0% | |
| TGTCAGGTGACATAAGAGGA+AGG | + | chr2.1:7112692-7112711 | None:intergenic | 45.0% | |
| ! | GCCACTGTGATAGTGAAAGT+AGG | + | chr2.1:7112738-7112757 | None:intergenic | 45.0% |
| ! | GTAGATTTGGTTGCATTGGC+AGG | - | chr2.1:7113028-7113047 | MS.gene45469:CDS | 45.0% |
| ! | GTGATGACGTGGGAAATCAA+AGG | + | chr2.1:7111844-7111863 | None:intergenic | 45.0% |
| ! | TGCATTAAGGGCATGCTCAA+TGG | + | chr2.1:7112236-7112255 | None:intergenic | 45.0% |
| !! | ACCTTGAATTGGTGATGACG+TGG | + | chr2.1:7111855-7111874 | None:intergenic | 45.0% |
| !! | CCTTGAATTGGTGATGACGT+GGG | + | chr2.1:7111854-7111873 | None:intergenic | 45.0% |
| !! | GTCATGAAGGAAGAGGCATT+GGG | - | chr2.1:7113754-7113773 | MS.gene45469:CDS | 45.0% |
| !! | GTGCAGATTTTGAGGGACAT+TGG | - | chr2.1:7114444-7114463 | MS.gene45469:CDS | 45.0% |
| !! | TCAGTGATTGGTGTTAGCAC+AGG | + | chr2.1:7114555-7114574 | None:intergenic | 45.0% |
| !! | TTCTCACCTTGTTGTTCCAC+AGG | + | chr2.1:7112012-7112031 | None:intergenic | 45.0% |
| AAGTCCTCGGATTTCGACTC+TGG | + | chr2.1:7112929-7112948 | None:intergenic | 50.0% | |
| ATCTCCAGAGTCGAAATCCG+AGG | - | chr2.1:7112922-7112941 | MS.gene45469:intron | 50.0% | |
| CCCACGTCATCACCAATTCA+AGG | - | chr2.1:7111851-7111870 | MS.gene45469:CDS | 50.0% | |
| CTGTGGCCAGCAACTAGATT+TGG | - | chr2.1:7113680-7113699 | MS.gene45469:intron | 50.0% | |
| GATGCTCGTGAGTATGGCAT+TGG | - | chr2.1:7113861-7113880 | MS.gene45469:CDS | 50.0% | |
| GCCCTTAATGCATTACGCCA+AGG | - | chr2.1:7112244-7112263 | MS.gene45469:intron | 50.0% | |
| GCTGTTGATGCTCGTGAGTA+TGG | - | chr2.1:7113855-7113874 | MS.gene45469:CDS | 50.0% | |
| GTCACCTGACACTGAAGAAG+AGG | - | chr2.1:7112701-7112720 | MS.gene45469:CDS | 50.0% | |
| GTTGGATGGAACTGAGCATG+TGG | - | chr2.1:7113435-7113454 | MS.gene45469:CDS | 50.0% | |
| TAGGAGAGCTGGTCATACTG+AGG | - | chr2.1:7113000-7113019 | MS.gene45469:CDS | 50.0% | |
| TGGAACTTCCACGGGTGTAT+CGG | - | chr2.1:7112865-7112884 | MS.gene45469:intron | 50.0% | |
| ! | GGTCATGAAGGAAGAGGCAT+TGG | - | chr2.1:7113753-7113772 | MS.gene45469:CDS | 50.0% |
| !! | GAAGGAAGAGGCATTGGGTT+AGG | - | chr2.1:7113759-7113778 | MS.gene45469:CDS | 50.0% |
| !! | TGAGTATGGCATTGGTGCCC+AGG | - | chr2.1:7113869-7113888 | MS.gene45469:CDS | 55.0% |
| ! | GGTGGAGTGCTTAGGAGAGC+TGG | - | chr2.1:7112989-7113008 | MS.gene45469:intron | 60.0% |
| !! | GGATCAGCTCGGTGTGACTG+TGG | - | chr2.1:7113663-7113682 | MS.gene45469:intron | 60.0% |
| !! | TTCCACGGGTGTATCGGCTG+CGG | - | chr2.1:7112871-7112890 | MS.gene45469:intron | 60.0% |
| ATCCGCAGCCGATACACCCG+TGG | + | chr2.1:7112876-7112895 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 7111817 | 7114641 | 7111817 | ID=MS.gene45469 |
| chr2.1 | mRNA | 7111817 | 7114641 | 7111817 | ID=MS.gene45469.t1;Parent=MS.gene45469 |
| chr2.1 | exon | 7114586 | 7114641 | 7114586 | ID=MS.gene45469.t1.exon1;Parent=MS.gene45469.t1 |
| chr2.1 | CDS | 7114586 | 7114641 | 7114586 | ID=cds.MS.gene45469.t1;Parent=MS.gene45469.t1 |
| chr2.1 | exon | 7114188 | 7114491 | 7114188 | ID=MS.gene45469.t1.exon2;Parent=MS.gene45469.t1 |
| chr2.1 | CDS | 7114188 | 7114491 | 7114188 | ID=cds.MS.gene45469.t1;Parent=MS.gene45469.t1 |
| chr2.1 | exon | 7113703 | 7113924 | 7113703 | ID=MS.gene45469.t1.exon3;Parent=MS.gene45469.t1 |
| chr2.1 | CDS | 7113703 | 7113924 | 7113703 | ID=cds.MS.gene45469.t1;Parent=MS.gene45469.t1 |
| chr2.1 | exon | 7113279 | 7113604 | 7113279 | ID=MS.gene45469.t1.exon4;Parent=MS.gene45469.t1 |
| chr2.1 | CDS | 7113279 | 7113604 | 7113279 | ID=cds.MS.gene45469.t1;Parent=MS.gene45469.t1 |
| chr2.1 | exon | 7112990 | 7113119 | 7112990 | ID=MS.gene45469.t1.exon5;Parent=MS.gene45469.t1 |
| chr2.1 | CDS | 7112990 | 7113119 | 7112990 | ID=cds.MS.gene45469.t1;Parent=MS.gene45469.t1 |
| chr2.1 | exon | 7112568 | 7112864 | 7112568 | ID=MS.gene45469.t1.exon6;Parent=MS.gene45469.t1 |
| chr2.1 | CDS | 7112568 | 7112864 | 7112568 | ID=cds.MS.gene45469.t1;Parent=MS.gene45469.t1 |
| chr2.1 | exon | 7111817 | 7112008 | 7111817 | ID=MS.gene45469.t1.exon7;Parent=MS.gene45469.t1 |
| chr2.1 | CDS | 7111817 | 7112008 | 7111817 | ID=cds.MS.gene45469.t1;Parent=MS.gene45469.t1 |
| Gene Sequence |
| Protein sequence |
