Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013709.t1 | XP_013461355.1 | 96.7 | 448 | 15 | 0 | 1 | 448 | 1 | 448 | 4.60E-251 | 876.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013709.t1 | O49285 | 72.9 | 454 | 114 | 4 | 1 | 447 | 1 | 452 | 2.5e-189 | 662.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013709.t1 | A0A072VB68 | 96.7 | 448 | 15 | 0 | 1 | 448 | 1 | 448 | 3.3e-251 | 876.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013709 | MS.gene20314 | PPI |
| MS.gene013709 | MS.gene015275 | PPI |
| MS.gene013709 | MS.gene44446 | PPI |
| MS.gene013709 | MS.gene43525 | PPI |
| MS.gene013709 | MS.gene60184 | PPI |
| MS.gene09616 | MS.gene013709 | PPI |
| MS.gene013709 | MS.gene011698 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013709.t1 | MTR_3g088885 | 96.652 | 448 | 15 | 0 | 1 | 448 | 1 | 448 | 0.0 | 898 |
| MS.gene013709.t1 | MTR_1g029520 | 81.395 | 430 | 72 | 6 | 25 | 447 | 254 | 682 | 0.0 | 703 |
| MS.gene013709.t1 | MTR_7g022470 | 53.604 | 444 | 189 | 9 | 9 | 447 | 10 | 441 | 7.32e-155 | 447 |
| MS.gene013709.t1 | MTR_5g047260 | 55.422 | 415 | 172 | 5 | 8 | 421 | 16 | 418 | 9.61e-155 | 446 |
| MS.gene013709.t1 | MTR_7g028050 | 48.984 | 443 | 213 | 7 | 9 | 446 | 1 | 435 | 1.48e-140 | 410 |
| MS.gene013709.t1 | MTR_4g101950 | 49.161 | 417 | 191 | 6 | 6 | 421 | 3 | 399 | 1.80e-132 | 389 |
| MS.gene013709.t1 | MTR_5g011580 | 45.657 | 449 | 217 | 8 | 6 | 447 | 3 | 431 | 4.89e-129 | 380 |
| MS.gene013709.t1 | MTR_5g015170 | 46.083 | 434 | 211 | 9 | 1 | 415 | 1 | 430 | 5.79e-127 | 377 |
| MS.gene013709.t1 | MTR_5g047260 | 52.661 | 357 | 156 | 5 | 8 | 363 | 16 | 360 | 6.61e-122 | 359 |
| MS.gene013709.t1 | MTR_4g097380 | 42.005 | 419 | 232 | 5 | 7 | 415 | 26 | 443 | 4.29e-115 | 347 |
| MS.gene013709.t1 | MTR_5g047260 | 53.770 | 305 | 129 | 4 | 8 | 311 | 16 | 309 | 1.74e-104 | 313 |
| MS.gene013709.t1 | MTR_7g028050 | 49.398 | 332 | 159 | 6 | 120 | 446 | 5 | 332 | 1.21e-99 | 301 |
| MS.gene013709.t1 | MTR_1g012740 | 50.000 | 100 | 44 | 1 | 278 | 377 | 54 | 147 | 4.16e-24 | 98.6 |
| MS.gene013709.t1 | MTR_1g012740 | 31.333 | 150 | 75 | 5 | 6 | 149 | 7 | 134 | 5.63e-13 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013709.t1 | AT1G76990 | 72.907 | 454 | 114 | 4 | 1 | 447 | 1 | 452 | 0.0 | 679 |
| MS.gene013709.t1 | AT1G76990 | 72.907 | 454 | 114 | 4 | 1 | 447 | 1 | 452 | 0.0 | 679 |
| MS.gene013709.t1 | AT1G76990 | 72.907 | 454 | 114 | 4 | 1 | 447 | 1 | 452 | 0.0 | 679 |
| MS.gene013709.t1 | AT1G76990 | 72.907 | 454 | 114 | 4 | 1 | 447 | 1 | 452 | 0.0 | 679 |
| MS.gene013709.t1 | AT1G76990 | 72.907 | 454 | 114 | 4 | 1 | 447 | 1 | 452 | 0.0 | 679 |
| MS.gene013709.t1 | AT1G69040 | 51.936 | 439 | 200 | 5 | 9 | 444 | 7 | 437 | 2.94e-148 | 430 |
| MS.gene013709.t1 | AT1G69040 | 51.936 | 439 | 200 | 5 | 9 | 444 | 11 | 441 | 3.26e-148 | 430 |
| MS.gene013709.t1 | AT2G03730 | 50.000 | 452 | 208 | 8 | 4 | 445 | 3 | 446 | 2.92e-144 | 420 |
| MS.gene013709.t1 | AT2G03730 | 50.000 | 452 | 208 | 8 | 4 | 445 | 3 | 446 | 2.92e-144 | 420 |
| MS.gene013709.t1 | AT5G25320 | 47.903 | 453 | 204 | 9 | 1 | 422 | 1 | 452 | 8.27e-144 | 420 |
| MS.gene013709.t1 | AT3G01990 | 51.724 | 406 | 176 | 8 | 10 | 410 | 17 | 407 | 1.44e-135 | 397 |
| MS.gene013709.t1 | AT3G01990 | 51.724 | 406 | 176 | 8 | 10 | 410 | 17 | 407 | 1.44e-135 | 397 |
| MS.gene013709.t1 | AT3G01990 | 51.724 | 406 | 176 | 8 | 10 | 410 | 3 | 393 | 1.53e-135 | 397 |
| MS.gene013709.t1 | AT3G01990 | 51.724 | 406 | 176 | 8 | 10 | 410 | 3 | 393 | 1.53e-135 | 397 |
| MS.gene013709.t1 | AT3G01990 | 51.724 | 406 | 176 | 8 | 10 | 410 | 17 | 407 | 1.79e-135 | 397 |
| MS.gene013709.t1 | AT3G01990 | 51.724 | 406 | 176 | 8 | 10 | 410 | 3 | 393 | 3.14e-135 | 396 |
| MS.gene013709.t1 | AT5G25320 | 47.585 | 414 | 187 | 7 | 38 | 422 | 1 | 413 | 9.88e-128 | 378 |
| MS.gene013709.t1 | AT1G12420 | 48.077 | 416 | 196 | 8 | 8 | 422 | 6 | 402 | 3.78e-121 | 360 |
| MS.gene013709.t1 | AT4G22780 | 48.507 | 402 | 183 | 7 | 12 | 410 | 9 | 389 | 9.76e-121 | 360 |
| MS.gene013709.t1 | AT4G22780 | 48.507 | 402 | 183 | 7 | 12 | 410 | 9 | 389 | 9.76e-121 | 360 |
| MS.gene013709.t1 | AT5G65890 | 40.860 | 465 | 248 | 7 | 7 | 446 | 8 | 470 | 4.32e-111 | 336 |
| MS.gene013709.t1 | AT5G65890 | 40.860 | 465 | 248 | 7 | 7 | 446 | 8 | 470 | 4.32e-111 | 336 |
| MS.gene013709.t1 | AT5G25320 | 46.113 | 373 | 170 | 8 | 1 | 342 | 1 | 373 | 1.76e-108 | 326 |
| MS.gene013709.t1 | AT3G01990 | 50.437 | 343 | 150 | 8 | 10 | 347 | 17 | 344 | 1.50e-106 | 320 |
| MS.gene013709.t1 | AT3G01990 | 50.437 | 343 | 150 | 8 | 10 | 347 | 3 | 330 | 1.90e-106 | 319 |
| MS.gene013709.t1 | AT3G01990 | 50.888 | 338 | 146 | 8 | 10 | 342 | 17 | 339 | 2.85e-106 | 319 |
| MS.gene013709.t1 | AT1G12420 | 46.552 | 348 | 167 | 7 | 76 | 422 | 1 | 330 | 3.54e-93 | 286 |
| MS.gene013709.t1 | AT5G65890 | 38.810 | 420 | 230 | 7 | 52 | 446 | 1 | 418 | 1.67e-91 | 284 |
| MS.gene013709.t1 | AT5G65890 | 38.810 | 420 | 230 | 7 | 52 | 446 | 1 | 418 | 1.67e-91 | 284 |
| MS.gene013709.t1 | AT3G01990 | 48.896 | 317 | 142 | 8 | 10 | 321 | 17 | 318 | 1.75e-87 | 270 |
| MS.gene013709.t1 | AT3G01990 | 48.896 | 317 | 142 | 8 | 10 | 321 | 3 | 304 | 1.92e-87 | 269 |
| MS.gene013709.t1 | AT5G65890 | 36.994 | 346 | 194 | 6 | 123 | 446 | 13 | 356 | 3.57e-69 | 224 |
Find 112 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCACTTCTTCTTTGTTC+TGG | 0.217028 | 3.4:-82072938 | None:intergenic |
| CCAAATGTTGTTTGCTGATC+GGG | 0.257041 | 3.4:+82073298 | MS.gene013709:CDS |
| TAACTTGTTGGAAAGGTTCT+TGG | 0.291999 | 3.4:+82074484 | MS.gene013709:CDS |
| ACCTTTAGGAATACTTTATT+CGG | 0.293495 | 3.4:+82073946 | MS.gene013709:intron |
| GGTGGAGCCGCCTATCAATA+TGG | 0.298908 | 3.4:-82073277 | None:intergenic |
| GGGAATGTCCTCCCTCTTTC+CGG | 0.308334 | 3.4:+82073354 | MS.gene013709:CDS |
| GCTAAAACTAGCTTCTTCTT+TGG | 0.325528 | 3.4:+82074461 | MS.gene013709:CDS |
| ATTGGTCAGGCAAATGGGTT+GGG | 0.336152 | 3.4:+82072961 | MS.gene013709:CDS |
| CAGCTACAACCACGTTAAAA+TGG | 0.336988 | 3.4:-82073076 | None:intergenic |
| TCATACTCAGGATCAAAATA+TGG | 0.343119 | 3.4:-82069978 | None:intergenic |
| CTTCTTCTTTGGTAACTTGT+TGG | 0.350472 | 3.4:+82074472 | MS.gene013709:CDS |
| ATAGAATGTTGTGAGGAAAA+AGG | 0.357579 | 3.4:+82073389 | MS.gene013709:CDS |
| ACCACTTCCAGTAGAATTCC+AGG | 0.366064 | 3.4:-82071741 | None:intergenic |
| CATATAGCAATTGAGCTAAT+CGG | 0.371261 | 3.4:+82073002 | MS.gene013709:CDS |
| CCCGATCAGCAAACAACATT+TGG | 0.373612 | 3.4:-82073298 | None:intergenic |
| ACAAAGAAGAAGTGAAGAAT+TGG | 0.384276 | 3.4:+82072943 | MS.gene013709:CDS |
| TTAGCCCATCCTCGTGTCTC+TGG | 0.409686 | 3.4:-82074443 | None:intergenic |
| TTGTACCATCATTGACATAA+AGG | 0.411329 | 3.4:-82073133 | None:intergenic |
| CTGAAGTGTGGACTCATAAC+AGG | 0.416112 | 3.4:+82073096 | MS.gene013709:CDS |
| ATCAGAAGATATGTAAGCTT+TGG | 0.416198 | 3.4:-82071796 | None:intergenic |
| TGAGTTTCACCCATATTGAT+AGG | 0.418165 | 3.4:+82073267 | MS.gene013709:CDS |
| TGAAGAATTGGTCAGGCAAA+TGG | 0.419920 | 3.4:+82072955 | MS.gene013709:CDS |
| TCTGGTTCTTTGTCATATGT+TGG | 0.422147 | 3.4:-82074425 | None:intergenic |
| CCTTGATTAGTGTACAGTTA+TGG | 0.426480 | 3.4:-82070783 | None:intergenic |
| TTCTGATGGAGGATGGTTCA+TGG | 0.433562 | 3.4:+82071812 | MS.gene013709:CDS |
| TTCTATGTGAGGGATGCATC+AGG | 0.435247 | 3.4:+82074323 | MS.gene013709:CDS |
| TTGCTGAAATTCTCATACTC+AGG | 0.439597 | 3.4:-82069990 | None:intergenic |
| GAAGCACTTCGTAAAGAAAT+CGG | 0.445977 | 3.4:+82074371 | MS.gene013709:CDS |
| TTAGAATGGCTGCAGTTTGT+TGG | 0.449593 | 3.4:+82069955 | None:intergenic |
| GGTGAAACTCATGGACAAAC+TGG | 0.453115 | 3.4:-82073255 | None:intergenic |
| AACCATAGATCTCATTGAAA+AGG | 0.459867 | 3.4:+82072706 | MS.gene013709:CDS |
| GATCGGGATTATGAAAGTTA+TGG | 0.463149 | 3.4:+82073314 | MS.gene013709:CDS |
| ATTAAGAGCTTGTTCCCCTC+TGG | 0.467903 | 3.4:-82074297 | None:intergenic |
| AGAATGGCCTAACAGTTTGT+AGG | 0.468609 | 3.4:+82074261 | MS.gene013709:CDS |
| ATACAGAAGGGGAGAAAGAA+AGG | 0.470876 | 3.4:+82073991 | MS.gene013709:CDS |
| GGCCTAACAGTTTGTAGGGC+AGG | 0.474532 | 3.4:+82074266 | MS.gene013709:CDS |
| TCTTTGGTAACTTGTTGGAA+AGG | 0.475792 | 3.4:+82074477 | MS.gene013709:CDS |
| ACCAAATGTTGTTTGCTGAT+CGG | 0.476294 | 3.4:+82073297 | MS.gene013709:CDS |
| ATATAGCAATTGAGCTAATC+GGG | 0.478241 | 3.4:+82073003 | MS.gene013709:CDS |
| TAACAAACCTGGAATTCTAC+TGG | 0.480298 | 3.4:+82071734 | MS.gene013709:CDS |
| ATCAATATGGGTGAAACTCA+TGG | 0.480529 | 3.4:-82073264 | None:intergenic |
| GAAGAAGTGAAGAATTGGTC+AGG | 0.491176 | 3.4:+82072948 | MS.gene013709:CDS |
| AATTGGTCAGGCAAATGGGT+TGG | 0.499259 | 3.4:+82072960 | MS.gene013709:CDS |
| ACAAGAATTCTGAGAGAGAA+TGG | 0.499775 | 3.4:+82074245 | MS.gene013709:CDS |
| TGGGTTGGGGTGCATTCTGT+TGG | 0.500255 | 3.4:+82072975 | MS.gene013709:CDS |
| CCATAACTGTACACTAATCA+AGG | 0.500495 | 3.4:+82070783 | MS.gene013709:CDS |
| TACTTTATTCGGCACATGGA+CGG | 0.504584 | 3.4:+82073957 | MS.gene013709:CDS |
| ATGGAGAGAAAGTTGCTAGT+AGG | 0.510505 | 3.4:+82073231 | MS.gene013709:CDS |
| TGATGTACCTGCGATGCATA+AGG | 0.510772 | 3.4:-82073527 | None:intergenic |
| ATCCGATGAGATTGTGGCAT+GGG | 0.515862 | 3.4:-82073501 | None:intergenic |
| GAAGAATTGGTCAGGCAAAT+GGG | 0.517093 | 3.4:+82072956 | MS.gene013709:CDS |
| ACCTGGAATTCTACTGGAAG+TGG | 0.521746 | 3.4:+82071740 | MS.gene013709:CDS |
| CGTTAAAATGGAGGCTGGCA+AGG | 0.523869 | 3.4:-82073064 | None:intergenic |
| TGTGTCCTTTATGTCAATGA+TGG | 0.524064 | 3.4:+82073128 | MS.gene013709:CDS |
| GTGGAGCCGCCTATCAATAT+GGG | 0.526124 | 3.4:-82073276 | None:intergenic |
| TATCCTTTGCACACAACTCT+AGG | 0.530398 | 3.4:-82074199 | None:intergenic |
| TTTGATAGTGTTAACAAACC+TGG | 0.530560 | 3.4:+82071723 | MS.gene013709:CDS |
| AAGATTAAGGTAAACCTTGG+AGG | 0.533637 | 3.4:-82070023 | None:intergenic |
| GATCAGCAAACAACATTTGG+TGG | 0.537075 | 3.4:-82073295 | None:intergenic |
| ATGGAGTAACGACAACAGAC+AGG | 0.537588 | 3.4:+82073333 | MS.gene013709:CDS |
| AAAGCTTACATATCTTCTGA+TGG | 0.539350 | 3.4:+82071798 | MS.gene013709:CDS |
| GTTGTGTGCAAAGGATAGAG+TGG | 0.544908 | 3.4:+82074205 | MS.gene013709:CDS |
| ACATATCTTCTGATGGAGGA+TGG | 0.557362 | 3.4:+82071805 | MS.gene013709:CDS |
| GAATGGCCTAACAGTTTGTA+GGG | 0.559276 | 3.4:+82074262 | MS.gene013709:CDS |
| TTGTGTGCAAAGGATAGAGT+GGG | 0.560363 | 3.4:+82074206 | MS.gene013709:CDS |
| GATATCTCAGACAAGAGACC+AGG | 0.560821 | 3.4:-82073035 | None:intergenic |
| TTGGTCAGGCAAATGGGTTG+GGG | 0.568849 | 3.4:+82072962 | MS.gene013709:CDS |
| CTCTTAATGTCTTCTATGTG+AGG | 0.569159 | 3.4:+82074312 | MS.gene013709:CDS |
| AAGAACCAGAGACACGAGGA+TGG | 0.572425 | 3.4:+82074438 | MS.gene013709:CDS |
| AGAAATCGGTAAGACAATGA+TGG | 0.575183 | 3.4:+82074385 | MS.gene013709:CDS |
| GCAACAAAATCAACCCTCCA+AGG | 0.576070 | 3.4:+82070009 | MS.gene013709:CDS |
| GGAATACTTTATTCGGCACA+TGG | 0.576960 | 3.4:+82073953 | MS.gene013709:intron |
| GGATGCACACTTGATACAGA+AGG | 0.577234 | 3.4:+82073978 | MS.gene013709:CDS |
| AATGATGGTAGATGTGAAGA+AGG | 0.579827 | 3.4:+82074400 | MS.gene013709:CDS |
| AACCACGTTAAAATGGAGGC+TGG | 0.580495 | 3.4:-82073069 | None:intergenic |
| CTTTGGTGATTATGAAGTCA+AGG | 0.580969 | 3.4:-82071779 | None:intergenic |
| AGATTAAGGTAAACCTTGGA+GGG | 0.581667 | 3.4:-82070022 | None:intergenic |
| TTCCCATGCCACAATCTCAT+CGG | 0.582164 | 3.4:+82073499 | MS.gene013709:CDS |
| AGGGCGATCCGATGAGATTG+TGG | 0.584876 | 3.4:-82073507 | None:intergenic |
| GGATCGCCCTTATGCATCGC+AGG | 0.593884 | 3.4:+82073520 | MS.gene013709:CDS |
| TGATGGTACAAGACAAGCCG+TGG | 0.600705 | 3.4:+82073145 | MS.gene013709:CDS |
| TACCTGCCCTACAAACTGTT+AGG | 0.606101 | 3.4:-82074268 | None:intergenic |
| ATATACAGTATTTCATGTCA+CGG | 0.612062 | 3.4:+82072652 | MS.gene013709:intron |
| TCTTAATGTCTTCTATGTGA+GGG | 0.617321 | 3.4:+82074313 | MS.gene013709:CDS |
| GGGCAGGTATATCAACCAGA+GGG | 0.617488 | 3.4:+82074282 | MS.gene013709:CDS |
| GATGTACCTGCGATGCATAA+GGG | 0.618291 | 3.4:-82073526 | None:intergenic |
| GCTTACATATCTTCTGATGG+AGG | 0.624587 | 3.4:+82071801 | MS.gene013709:CDS |
| TTTCATGTCACGGATCAACA+AGG | 0.626341 | 3.4:+82072662 | MS.gene013709:CDS |
| TACAGAAGGGGAGAAAGAAA+GGG | 0.629110 | 3.4:+82073992 | MS.gene013709:CDS |
| CTAATCGGGAGAGACCGCCC+TGG | 0.632484 | 3.4:+82073017 | MS.gene013709:CDS |
| GATGCACACTTGATACAGAA+GGG | 0.635196 | 3.4:+82073979 | MS.gene013709:CDS |
| AGAACCAGAGACACGAGGAT+GGG | 0.635874 | 3.4:+82074439 | MS.gene013709:CDS |
| TGTACTTTGCAGGGTCTCCG+TGG | 0.635916 | 3.4:+82070747 | MS.gene013709:intron |
| TCTATGTGAGGGATGCATCA+GGG | 0.636872 | 3.4:+82074324 | MS.gene013709:CDS |
| ACGTGGTTGTAGCTGAAGTG+TGG | 0.647683 | 3.4:+82073084 | MS.gene013709:CDS |
| GATCCGATGAGATTGTGGCA+TGG | 0.649683 | 3.4:-82073502 | None:intergenic |
| GATGGAGGATGGTTCATGGA+TGG | 0.659799 | 3.4:+82071816 | MS.gene013709:CDS |
| CTACAACCACGTTAAAATGG+AGG | 0.661407 | 3.4:-82073073 | None:intergenic |
| TTCATGTCACGGATCAACAA+GGG | 0.666664 | 3.4:+82072663 | MS.gene013709:CDS |
| AATTACCATAGAATGTTGTG+AGG | 0.670161 | 3.4:+82073382 | MS.gene013709:CDS |
| ATGCACACTTGATACAGAAG+GGG | 0.670406 | 3.4:+82073980 | MS.gene013709:CDS |
| ATGGCAACTAGCATTGTCCA+CGG | 0.673612 | 3.4:-82070764 | None:intergenic |
| TATTCAAAGAAGAGTAAGCG+AGG | 0.682011 | 3.4:+82074037 | MS.gene013709:CDS |
| GTTTCACCCATATTGATAGG+CGG | 0.683397 | 3.4:+82073270 | MS.gene013709:CDS |
| TGGAGTAACGACAACAGACA+GGG | 0.688299 | 3.4:+82073334 | MS.gene013709:CDS |
| ATATCTCAGACAAGAGACCA+GGG | 0.700312 | 3.4:-82073034 | None:intergenic |
| GGATGCATCAGGGAACTCAG+TGG | 0.701774 | 3.4:+82074334 | MS.gene013709:CDS |
| GAGCCTAGAGTTGTGTGCAA+AGG | 0.708129 | 3.4:+82074196 | MS.gene013709:CDS |
| AGGGCAGGTATATCAACCAG+AGG | 0.716826 | 3.4:+82074281 | MS.gene013709:CDS |
| GACAAAGAACCAGAGACACG+AGG | 0.718132 | 3.4:+82074434 | MS.gene013709:CDS |
| GGCAGGTATATCAACCAGAG+GGG | 0.745288 | 3.4:+82074283 | MS.gene013709:CDS |
| TCTCAGACAAGAGACCAGGG+CGG | 0.828951 | 3.4:-82073031 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATATAAAATACTTTTGTA+AGG | + | chr3.4:82070167-82070186 | MS.gene013709:intron | 10.0% |
| !!! | AATTAAAACTGAAAAATTTT+CGG | - | chr3.4:82071224-82071243 | None:intergenic | 10.0% |
| !!! | AATTGAATATAATTTGTAAA+AGG | - | chr3.4:82071541-82071560 | None:intergenic | 10.0% |
| !!! | ATGTATAAATAAATTTTTCA+AGG | + | chr3.4:82072860-82072879 | MS.gene013709:intron | 10.0% |
| !!! | GAAAAATTTTTTTTTTTTGA+AGG | + | chr3.4:82071317-82071336 | MS.gene013709:intron | 10.0% |
| !!! | TGTATAAATAAATTTTTCAA+GGG | + | chr3.4:82072861-82072880 | MS.gene013709:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTTGAAC+CGG | + | chr3.4:82072296-82072315 | MS.gene013709:intron | 10.0% |
| !! | AAAAAATCGCAAAAAAAATT+TGG | - | chr3.4:82071199-82071218 | None:intergenic | 15.0% |
| !! | AAAAATCGCAAAAAAAATTT+GGG | - | chr3.4:82071198-82071217 | None:intergenic | 15.0% |
| !! | TAAAAAATAGAAAAACTCTA+GGG | - | chr3.4:82070938-82070957 | None:intergenic | 15.0% |
| !! | TATATTCATTTATCAAGATA+TGG | + | chr3.4:82072764-82072783 | MS.gene013709:intron | 15.0% |
| !! | TTCATAAAGAATCATTTATT+TGG | + | chr3.4:82071653-82071672 | MS.gene013709:intron | 15.0% |
| !!! | AAACTGAATTTTTTTTTTGA+AGG | - | chr3.4:82071172-82071191 | None:intergenic | 15.0% |
| !!! | AATTTATTCTTGTAACATTT+TGG | - | chr3.4:82073855-82073874 | None:intergenic | 15.0% |
| !!! | AGTTTTTCTATTTTTTACAA+AGG | + | chr3.4:82070941-82070960 | MS.gene013709:intron | 15.0% |
| !!! | ATTAAAACTGAAAAATTTTC+GGG | - | chr3.4:82071223-82071242 | None:intergenic | 15.0% |
| !!! | CTTTAAAATTTAACCAAATA+TGG | + | chr3.4:82070063-82070082 | MS.gene013709:intron | 15.0% |
| !!! | TATTCAATTTTCAAACTTAT+AGG | + | chr3.4:82071552-82071571 | MS.gene013709:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTTGAACC+GGG | + | chr3.4:82072297-82072316 | MS.gene013709:intron | 15.0% |
| !! | AAAAAATAGAAAAACTCTAG+GGG | - | chr3.4:82070937-82070956 | None:intergenic | 20.0% |
| !! | AAAAAATAGAAAGAAAGTTG+TGG | + | chr3.4:82072188-82072207 | MS.gene013709:intron | 20.0% |
| !! | AAAACAAAAAAAAATAAGCC+AGG | - | chr3.4:82071145-82071164 | None:intergenic | 20.0% |
| !! | AAAAGGAATATTACCATATT+TGG | - | chr3.4:82070079-82070098 | None:intergenic | 20.0% |
| !! | AAACAAAAAAAAATAAGCCA+GGG | - | chr3.4:82071144-82071163 | None:intergenic | 20.0% |
| !! | AATTATGCAATGTAAAAGTA+TGG | + | chr3.4:82072494-82072513 | MS.gene013709:intron | 20.0% |
| !! | ACTTTAACACTCTTTATTAT+TGG | + | chr3.4:82072432-82072451 | MS.gene013709:intron | 20.0% |
| !! | AGTCTTAGTATTAAATTCTA+CGG | + | chr3.4:82074155-82074174 | MS.gene013709:intron | 20.0% |
| !! | ATACATCAATTTCTCATAAA+TGG | - | chr3.4:82070246-82070265 | None:intergenic | 20.0% |
| !! | CTCTTGACTATTATTAATAA+CGG | - | chr3.4:82071960-82071979 | None:intergenic | 20.0% |
| !! | CTTTAACACTCTTTATTATT+GGG | + | chr3.4:82072433-82072452 | MS.gene013709:intron | 20.0% |
| !! | GAAATACTGTATATATCAAT+CGG | - | chr3.4:82072646-82072665 | None:intergenic | 20.0% |
| !! | GATTCTTTATGAAACAATAA+AGG | - | chr3.4:82071646-82071665 | None:intergenic | 20.0% |
| !! | GTAAAAAATAGAAAAACTCT+AGG | - | chr3.4:82070939-82070958 | None:intergenic | 20.0% |
| !! | TCAAAAAAGAATATCTCTTA+TGG | + | chr3.4:82073172-82073191 | MS.gene013709:CDS | 20.0% |
| !! | TTAAATACTTGTATCAAGTA+GGG | - | chr3.4:82072607-82072626 | None:intergenic | 20.0% |
| !!! | AAATAATTTTCAGACAAACA+AGG | - | chr3.4:82073820-82073839 | None:intergenic | 20.0% |
| !!! | AATAATTTTCAGACAAACAA+GGG | - | chr3.4:82073819-82073838 | None:intergenic | 20.0% |
| !!! | GAATTTTTTCTATAAGATAG+AGG | + | chr3.4:82073650-82073669 | MS.gene013709:intron | 20.0% |
| !!! | TTAAAACTGAAAAATTTTCG+GGG | - | chr3.4:82071222-82071241 | None:intergenic | 20.0% |
| !!! | TTAACAGTTTTTCATACAAT+AGG | + | chr3.4:82072899-82072918 | MS.gene013709:intron | 20.0% |
| !!! | TTCCTACTAATTTTGTTTAT+TGG | + | chr3.4:82073792-82073811 | MS.gene013709:intron | 20.0% |
| !!! | TTTCTATTTTTTCAAGCTTA+GGG | - | chr3.4:82072180-82072199 | None:intergenic | 20.0% |
| ! | AAAAAGAATATCTCTTATGG+AGG | + | chr3.4:82073175-82073194 | MS.gene013709:CDS | 25.0% |
| ! | AACAAAAAAAAATAAGCCAG+GGG | - | chr3.4:82071143-82071162 | None:intergenic | 25.0% |
| ! | ATATACAGTATTTCATGTCA+CGG | + | chr3.4:82072652-82072671 | MS.gene013709:intron | 25.0% |
| ! | ATTAGAAATATGAAGACTTG+AGG | + | chr3.4:82073897-82073916 | MS.gene013709:intron | 25.0% |
| ! | ATTCTCACTTGGATTAATTT+AGG | + | chr3.4:82073872-82073891 | MS.gene013709:intron | 25.0% |
| ! | CAAAATATTACTACACAAAG+TGG | + | chr3.4:82070583-82070602 | MS.gene013709:intron | 25.0% |
| ! | CGATGAGTAATTGAAAAAAA+CGG | + | chr3.4:82072340-82072359 | MS.gene013709:intron | 25.0% |
| ! | CGTTATTAATAATAGTCAAG+AGG | + | chr3.4:82071958-82071977 | MS.gene013709:intron | 25.0% |
| ! | CTTAAATACTTGTATCAAGT+AGG | - | chr3.4:82072608-82072627 | None:intergenic | 25.0% |
| ! | GTCCAATAAACAAAATTAGT+AGG | - | chr3.4:82073797-82073816 | None:intergenic | 25.0% |
| ! | TACAAGAATAAATTCTCACT+TGG | + | chr3.4:82073861-82073880 | MS.gene013709:intron | 25.0% |
| ! | TATTAATAATAGTCAAGAGG+TGG | + | chr3.4:82071961-82071980 | MS.gene013709:intron | 25.0% |
| ! | TGCCTATCATAAAAATGAAA+TGG | + | chr3.4:82072371-82072390 | MS.gene013709:intron | 25.0% |
| ! | TTAACTGATTAAACTTTGCA+GGG | + | chr3.4:82071437-82071456 | MS.gene013709:intron | 25.0% |
| ! | TTAACTGATTAAACTTTGCA+GGG | - | chr3.4:82071456-82071437 | None:intergenic | 25.0% |
| ! | TTAGGAGTAATGTTGTAATA+TGG | + | chr3.4:82072120-82072139 | MS.gene013709:intron | 25.0% |
| ! | TTGTATGAAAAACTGTTAAC+AGG | - | chr3.4:82072898-82072917 | None:intergenic | 25.0% |
| ! | TTTAACTGATTAAACTTTGC+AGG | + | chr3.4:82071436-82071455 | MS.gene013709:intron | 25.0% |
| ! | TTTAACTGATTAAACTTTGC+AGG | - | chr3.4:82071455-82071436 | None:intergenic | 25.0% |
| !! | CAACATTCTATGGTAATTTT+CGG | - | chr3.4:82073380-82073399 | None:intergenic | 25.0% |
| !! | CACTTTGTGTAGTAATATTT+TGG | - | chr3.4:82070585-82070604 | None:intergenic | 25.0% |
| !! | GTATTAAATTCTACGGATTT+TGG | + | chr3.4:82074162-82074181 | MS.gene013709:intron | 25.0% |
| !! | TCTTTGTAGCTAATGAATTT+TGG | - | chr3.4:82071870-82071889 | None:intergenic | 25.0% |
| !!! | CAACTTGTATTTTAACACTA+AGG | - | chr3.4:82072146-82072165 | None:intergenic | 25.0% |
| !!! | CATTATTCTGTTTCTATGTA+AGG | - | chr3.4:82073714-82073733 | None:intergenic | 25.0% |
| !!! | CTTTCTATTTTTTCAAGCTT+AGG | - | chr3.4:82072181-82072200 | None:intergenic | 25.0% |
| !!! | TAATAAAGAGTGTTAAAGTG+TGG | - | chr3.4:82072431-82072450 | None:intergenic | 25.0% |
| !!! | TATTCTTTTTTGATCATCCA+CGG | - | chr3.4:82073165-82073184 | None:intergenic | 25.0% |
| !!! | TGCCATTTCATTTTTATGAT+AGG | - | chr3.4:82072376-82072395 | None:intergenic | 25.0% |
| AAAAGTTCTTTCACAAATCG+TGG | - | chr3.4:82074102-82074121 | None:intergenic | 30.0% | |
| AAACTTCATTTGTACTTTGC+AGG | + | chr3.4:82070737-82070756 | MS.gene013709:intron | 30.0% | |
| AAAGCTTACATATCTTCTGA+TGG | + | chr3.4:82071798-82071817 | MS.gene013709:CDS | 30.0% | |
| AACCATAGATCTCATTGAAA+AGG | + | chr3.4:82072706-82072725 | MS.gene013709:CDS | 30.0% | |
| AACTTCATTTGTACTTTGCA+GGG | + | chr3.4:82070738-82070757 | MS.gene013709:intron | 30.0% | |
| AAGGAAAAAAAAATTAGCCC+AGG | + | chr3.4:82071336-82071355 | MS.gene013709:intron | 30.0% | |
| AATGAAGTTTACCATCAAAG+AGG | - | chr3.4:82070727-82070746 | None:intergenic | 30.0% | |
| AATTACCATAGAATGTTGTG+AGG | + | chr3.4:82073382-82073401 | MS.gene013709:CDS | 30.0% | |
| ACAAAGAAGAAGTGAAGAAT+TGG | + | chr3.4:82072943-82072962 | MS.gene013709:CDS | 30.0% | |
| ACACAGATATACACAATGTT+TGG | - | chr3.4:82072260-82072279 | None:intergenic | 30.0% | |
| ACGTCATCAAATTAACACAA+TGG | + | chr3.4:82071097-82071116 | MS.gene013709:intron | 30.0% | |
| AGATTAAGGTTCAAACTCAT+AGG | - | chr3.4:82070465-82070484 | None:intergenic | 30.0% | |
| AGATTGTGTTAAAAGGAGAT+CGG | - | chr3.4:82070516-82070535 | None:intergenic | 30.0% | |
| AGCTCTGTTAAAAAAAGAGA+AGG | - | chr3.4:82070316-82070335 | None:intergenic | 30.0% | |
| AGGAAAAAAAAATTAGCCCA+GGG | + | chr3.4:82071337-82071356 | MS.gene013709:intron | 30.0% | |
| ATAGAATGTTGTGAGGAAAA+AGG | + | chr3.4:82073389-82073408 | MS.gene013709:CDS | 30.0% | |
| ATATAGCAATTGAGCTAATC+GGG | + | chr3.4:82073003-82073022 | MS.gene013709:CDS | 30.0% | |
| ATCAAATTAACACAATGGCA+TGG | + | chr3.4:82071102-82071121 | MS.gene013709:intron | 30.0% | |
| ATCAGAAGATATGTAAGCTT+TGG | - | chr3.4:82071799-82071818 | None:intergenic | 30.0% | |
| ATGGAAAAAAGTCATCAAAG+AGG | - | chr3.4:82070839-82070858 | None:intergenic | 30.0% | |
| CAAAATTACCATAATGGCAT+GGG | - | chr3.4:82071378-82071397 | None:intergenic | 30.0% | |
| CATATAGCAATTGAGCTAAT+CGG | + | chr3.4:82073002-82073021 | MS.gene013709:CDS | 30.0% | |
| CATGATCAGATTGTGTTAAA+AGG | - | chr3.4:82070523-82070542 | None:intergenic | 30.0% | |
| CGTCATCAAAATTACCATAA+TGG | - | chr3.4:82071384-82071403 | None:intergenic | 30.0% | |
| CTTACATGACACATTCATAT+TGG | - | chr3.4:82072053-82072072 | None:intergenic | 30.0% | |
| GATAAGATTAAGGTAAACCT+TGG | - | chr3.4:82070029-82070048 | None:intergenic | 30.0% | |
| GCGAAATCAAGATAAGATTA+AGG | - | chr3.4:82070039-82070058 | None:intergenic | 30.0% | |
| GCTTCAGTTTCTACTTTAAT+TGG | + | chr3.4:82070669-82070688 | MS.gene013709:intron | 30.0% | |
| TAACTGATTAAACTTTGCAG+GGG | + | chr3.4:82071438-82071457 | MS.gene013709:intron | 30.0% | |
| TAACTGATTAAACTTTGCAG+GGG | - | chr3.4:82071457-82071438 | None:intergenic | 30.0% | |
| TATAAGATAGAGGTCATGAA+AGG | + | chr3.4:82073660-82073679 | MS.gene013709:intron | 30.0% | |
| TCAAAATTACCATAATGGCA+TGG | - | chr3.4:82071379-82071398 | None:intergenic | 30.0% | |
| TCAAATTAACACAATGGCAT+GGG | + | chr3.4:82071103-82071122 | MS.gene013709:intron | 30.0% | |
| TCATACTCAGGATCAAAATA+TGG | - | chr3.4:82069981-82070000 | None:intergenic | 30.0% | |
| TCCCATATGAAATTTGAACA+GGG | - | chr3.4:82071899-82071918 | None:intergenic | 30.0% | |
| TCTTAATGTCTTCTATGTGA+GGG | + | chr3.4:82074313-82074332 | MS.gene013709:CDS | 30.0% | |
| TGTTCAAATTTCATATGGGA+CGG | + | chr3.4:82071899-82071918 | MS.gene013709:intron | 30.0% | |
| TTAAATGGTTCAAATGTCGA+GGG | + | chr3.4:82073597-82073616 | MS.gene013709:intron | 30.0% | |
| TTGTACCATCATTGACATAA+AGG | - | chr3.4:82073136-82073155 | None:intergenic | 30.0% | |
| TTTAACACAATCTGATCATG+AGG | + | chr3.4:82070523-82070542 | MS.gene013709:intron | 30.0% | |
| ! | AGATACAGCTTTTCTCAATT+TGG | + | chr3.4:82073767-82073786 | MS.gene013709:intron | 30.0% |
| ! | ATAACTGCCAAAGTTTTCAA+CGG | - | chr3.4:82071996-82072015 | None:intergenic | 30.0% |
| ! | ATTGGTTTCAGCTAAGATTA+AGG | - | chr3.4:82070479-82070498 | None:intergenic | 30.0% |
| ! | CAAACTCATCTTAGTTCTTT+CGG | + | chr3.4:82070373-82070392 | MS.gene013709:intron | 30.0% |
| ! | CAATGTTTGGTAACAAAGTT+CGG | - | chr3.4:82072247-82072266 | None:intergenic | 30.0% |
| ! | TATGCAATGTAAAAGTATGG+TGG | + | chr3.4:82072497-82072516 | MS.gene013709:intron | 30.0% |
| ! | TTTTTCATACAATAGGCTCT+AGG | + | chr3.4:82072906-82072925 | MS.gene013709:intron | 30.0% |
| ! | TTTTTCCTCACAACATTCTA+TGG | - | chr3.4:82073390-82073409 | None:intergenic | 30.0% |
| !! | ATTGTGTTAATTTGATGACG+TGG | - | chr3.4:82071098-82071117 | None:intergenic | 30.0% |
| !! | TTTGATAGTGTTAACAAACC+TGG | + | chr3.4:82071723-82071742 | MS.gene013709:CDS | 30.0% |
| !! | TTTTTCAATTACTCATCGCA+AGG | - | chr3.4:82072338-82072357 | None:intergenic | 30.0% |
| !!! | ATTTGATGGTTTTAGGCAAA+AGG | - | chr3.4:82070096-82070115 | None:intergenic | 30.0% |
| !!! | TCTTTGATGACTTTTTTCCA+TGG | + | chr3.4:82070838-82070857 | MS.gene013709:intron | 30.0% |
| !!! | TTATGGTAATTTTGATGACG+TGG | + | chr3.4:82071384-82071403 | MS.gene013709:intron | 30.0% |
| AAGATTAAGGTAAACCTTGG+AGG | - | chr3.4:82070026-82070045 | None:intergenic | 35.0% | |
| AATGATGGTAGATGTGAAGA+AGG | + | chr3.4:82074400-82074419 | MS.gene013709:CDS | 35.0% | |
| AATGTTGATCGTGTACCTTT+AGG | + | chr3.4:82073932-82073951 | MS.gene013709:intron | 35.0% | |
| ACAAGTGGCTACTTAAAAAG+TGG | - | chr3.4:82071610-82071629 | None:intergenic | 35.0% | |
| AGAAATCGGTAAGACAATGA+TGG | + | chr3.4:82074385-82074404 | MS.gene013709:CDS | 35.0% | |
| AGATTAAGGTAAACCTTGGA+GGG | - | chr3.4:82070025-82070044 | None:intergenic | 35.0% | |
| AGTCACACATGGTACTTAAA+TGG | + | chr3.4:82073582-82073601 | MS.gene013709:intron | 35.0% | |
| ATATGAAGACTTGAGGAATG+TGG | + | chr3.4:82073904-82073923 | MS.gene013709:intron | 35.0% | |
| ATCAATATGGGTGAAACTCA+TGG | - | chr3.4:82073267-82073286 | None:intergenic | 35.0% | |
| ATGGTAACCGTTGAAAACTT+TGG | + | chr3.4:82071986-82072005 | MS.gene013709:intron | 35.0% | |
| CACACAATCACACACATTTA+TGG | + | chr3.4:82072562-82072581 | MS.gene013709:intron | 35.0% | |
| CCATAACTGTACACTAATCA+AGG | + | chr3.4:82070783-82070802 | MS.gene013709:CDS | 35.0% | |
| CCTTGATTAGTGTACAGTTA+TGG | - | chr3.4:82070786-82070805 | None:intergenic | 35.0% | |
| CTCTTAATGTCTTCTATGTG+AGG | + | chr3.4:82074312-82074331 | MS.gene013709:CDS | 35.0% | |
| CTTAAATGGTTCAAATGTCG+AGG | + | chr3.4:82073596-82073615 | MS.gene013709:intron | 35.0% | |
| GATCGGGATTATGAAAGTTA+TGG | + | chr3.4:82073314-82073333 | MS.gene013709:CDS | 35.0% | |
| GCATAAACGTGTGAATTTGA+TGG | - | chr3.4:82070110-82070129 | None:intergenic | 35.0% | |
| GCCCTGTTCAAATTTCATAT+GGG | + | chr3.4:82071895-82071914 | MS.gene013709:intron | 35.0% | |
| GGAAAAAAAAATTAGCCCAG+GGG | + | chr3.4:82071338-82071357 | MS.gene013709:intron | 35.0% | |
| GGAGGATTTGTGTATTCAAA+TGG | + | chr3.4:82073688-82073707 | MS.gene013709:intron | 35.0% | |
| GTAGAAACTGAAGCTGAATA+AGG | - | chr3.4:82070663-82070682 | None:intergenic | 35.0% | |
| GTCCCATATGAAATTTGAAC+AGG | - | chr3.4:82071900-82071919 | None:intergenic | 35.0% | |
| GTTCAAATTTCATATGGGAC+GGG | + | chr3.4:82071900-82071919 | MS.gene013709:intron | 35.0% | |
| TAAAAAGTGGTACTCACAGA+GGG | - | chr3.4:82071597-82071616 | None:intergenic | 35.0% | |
| TAACAAACCTGGAATTCTAC+TGG | + | chr3.4:82071734-82071753 | MS.gene013709:CDS | 35.0% | |
| TAATAGTCAAGAGGTGGTAA+TGG | + | chr3.4:82071967-82071986 | MS.gene013709:intron | 35.0% | |
| TATGAGTCATACTCACTGAT+AGG | - | chr3.4:82072088-82072107 | None:intergenic | 35.0% | |
| TATTCAAAGAAGAGTAAGCG+AGG | + | chr3.4:82074037-82074056 | MS.gene013709:CDS | 35.0% | |
| TCTTCACTTCTTCTTTGTTC+TGG | - | chr3.4:82072941-82072960 | None:intergenic | 35.0% | |
| TGAGTTTCACCCATATTGAT+AGG | + | chr3.4:82073267-82073286 | MS.gene013709:CDS | 35.0% | |
| TGCCCTGTTCAAATTTCATA+TGG | + | chr3.4:82071894-82071913 | MS.gene013709:intron | 35.0% | |
| TGGAAGACTCAAATTCATTG+CGG | + | chr3.4:82072806-82072825 | MS.gene013709:intron | 35.0% | |
| TGTGTCCTTTATGTCAATGA+TGG | + | chr3.4:82073128-82073147 | MS.gene013709:CDS | 35.0% | |
| TTAAAAAGTGGTACTCACAG+AGG | - | chr3.4:82071598-82071617 | None:intergenic | 35.0% | |
| TTGCTGAAATTCTCATACTC+AGG | - | chr3.4:82069993-82070012 | None:intergenic | 35.0% | |
| TTGTGAGGAAAAAGGATACT+CGG | + | chr3.4:82073397-82073416 | MS.gene013709:CDS | 35.0% | |
| ! | AAAAAAGGATTAGCGATTGC+AGG | + | chr3.4:82071465-82071484 | MS.gene013709:intron | 35.0% |
| ! | AAAAAAGGATTAGCGATTGC+AGG | - | chr3.4:82071484-82071465 | None:intergenic | 35.0% |
| ! | AAAAAGGATTAGCGATTGCA+GGG | + | chr3.4:82071466-82071485 | MS.gene013709:intron | 35.0% |
| ! | AAAAAGGATTAGCGATTGCA+GGG | - | chr3.4:82071485-82071466 | None:intergenic | 35.0% |
| ! | ACAAGAATTCTGAGAGAGAA+TGG | + | chr3.4:82074245-82074264 | MS.gene013709:CDS | 35.0% |
| ! | ACCAAATGTTGTTTGCTGAT+CGG | + | chr3.4:82073297-82073316 | MS.gene013709:CDS | 35.0% |
| ! | AGAGTGTTAAAGTGTGGTAT+TGG | - | chr3.4:82072425-82072444 | None:intergenic | 35.0% |
| ! | ATCAGCTACTTTAGAAGTCT+AGG | + | chr3.4:82070886-82070905 | MS.gene013709:intron | 35.0% |
| ! | ATTCTATGGTAATTTTCGGC+CGG | - | chr3.4:82073376-82073395 | None:intergenic | 35.0% |
| ! | CACCTTTTCAATGAGATCTA+TGG | - | chr3.4:82072711-82072730 | None:intergenic | 35.0% |
| ! | CAGCTCAATAACATTTTACG+TGG | + | chr3.4:82073200-82073219 | MS.gene013709:CDS | 35.0% |
| ! | CTTCTTCTTTGGTAACTTGT+TGG | + | chr3.4:82074472-82074491 | MS.gene013709:CDS | 35.0% |
| ! | CTTTGGTGATTATGAAGTCA+AGG | - | chr3.4:82071782-82071801 | None:intergenic | 35.0% |
| ! | GAAGCACTTCGTAAAGAAAT+CGG | + | chr3.4:82074371-82074390 | MS.gene013709:CDS | 35.0% |
| ! | GCTAAAACTAGCTTCTTCTT+TGG | + | chr3.4:82074461-82074480 | MS.gene013709:CDS | 35.0% |
| ! | TAACATTTTACGTGGATGTG+AGG | + | chr3.4:82073208-82073227 | MS.gene013709:CDS | 35.0% |
| !! | AAAAGAAGTGTCCTCTTTGA+TGG | + | chr3.4:82070713-82070732 | MS.gene013709:intron | 35.0% |
| !! | CGTGTGAATTTGATGGTTTT+AGG | - | chr3.4:82070103-82070122 | None:intergenic | 35.0% |
| !! | GTTTTAGACGAAAAAGGAAG+AGG | + | chr3.4:82072399-82072418 | MS.gene013709:intron | 35.0% |
| !! | TAACTTGTTGGAAAGGTTCT+TGG | + | chr3.4:82074484-82074503 | MS.gene013709:CDS | 35.0% |
| !! | TAGACTTCTAAAGTAGCTGA+TGG | - | chr3.4:82070887-82070906 | None:intergenic | 35.0% |
| !! | TCTGGTTCTTTGTCATATGT+TGG | - | chr3.4:82074428-82074447 | None:intergenic | 35.0% |
| !! | TCTTTGGTAACTTGTTGGAA+AGG | + | chr3.4:82074477-82074496 | MS.gene013709:CDS | 35.0% |
| !!! | GCATGAGTTTTAGACGAAAA+AGG | + | chr3.4:82072393-82072412 | MS.gene013709:intron | 35.0% |
| !!! | TCTTCTTTGTTCTGGCTTTT+TGG | - | chr3.4:82072933-82072952 | None:intergenic | 35.0% |
| AAATTTCATATGGGACGGGA+CGG | + | chr3.4:82071904-82071923 | MS.gene013709:intron | 40.0% | |
| ACATATCTTCTGATGGAGGA+TGG | + | chr3.4:82071805-82071824 | MS.gene013709:CDS | 40.0% | |
| AGAATGGCCTAACAGTTTGT+AGG | + | chr3.4:82074261-82074280 | MS.gene013709:CDS | 40.0% | |
| AGGTATTAAAACAGCACTCC+CGG | - | chr3.4:82072318-82072337 | None:intergenic | 40.0% | |
| ATACAGAAGGGGAGAAAGAA+AGG | + | chr3.4:82073991-82074010 | MS.gene013709:CDS | 40.0% | |
| ATATCTCAGACAAGAGACCA+GGG | - | chr3.4:82073037-82073056 | None:intergenic | 40.0% | |
| ATGAATTTGAGTCTTCCACG+TGG | - | chr3.4:82072804-82072823 | None:intergenic | 40.0% | |
| ATGCACACTTGATACAGAAG+GGG | + | chr3.4:82073980-82073999 | MS.gene013709:CDS | 40.0% | |
| ATGGAGAGAAAGTTGCTAGT+AGG | + | chr3.4:82073231-82073250 | MS.gene013709:CDS | 40.0% | |
| CAGCTACAACCACGTTAAAA+TGG | - | chr3.4:82073079-82073098 | None:intergenic | 40.0% | |
| CCAAACCACAACTCATATAG+AGG | - | chr3.4:82070864-82070883 | None:intergenic | 40.0% | |
| CCTCTATATGAGTTGTGGTT+TGG | + | chr3.4:82070861-82070880 | MS.gene013709:intron | 40.0% | |
| CTACAACCACGTTAAAATGG+AGG | - | chr3.4:82073076-82073095 | None:intergenic | 40.0% | |
| CTCATAGTGCAGTACAGTTT+AGG | + | chr3.4:82072102-82072121 | MS.gene013709:intron | 40.0% | |
| CTTTGCAGGGGCAAAAAAAA+AGG | + | chr3.4:82071450-82071469 | MS.gene013709:intron | 40.0% | |
| CTTTGCAGGGGCAAAAAAAA+AGG | - | chr3.4:82071469-82071450 | None:intergenic | 40.0% | |
| GAAGAAGTGAAGAATTGGTC+AGG | + | chr3.4:82072948-82072967 | MS.gene013709:CDS | 40.0% | |
| GAAGAATTGGTCAGGCAAAT+GGG | + | chr3.4:82072956-82072975 | MS.gene013709:CDS | 40.0% | |
| GAATGGCCTAACAGTTTGTA+GGG | + | chr3.4:82074262-82074281 | MS.gene013709:CDS | 40.0% | |
| GAATTGACGAAAATACCCCT+GGG | - | chr3.4:82071144-82071125 | None:intergenic | 40.0% | |
| GAGTGAGACACTACATATGT+TGG | - | chr3.4:82070196-82070215 | None:intergenic | 40.0% | |
| GATCAGCAAACAACATTTGG+TGG | - | chr3.4:82073298-82073317 | None:intergenic | 40.0% | |
| GATGCACACTTGATACAGAA+GGG | + | chr3.4:82073979-82073998 | MS.gene013709:CDS | 40.0% | |
| GCTTACATATCTTCTGATGG+AGG | + | chr3.4:82071801-82071820 | MS.gene013709:CDS | 40.0% | |
| GTGACTGATAAGTGAACATG+CGG | - | chr3.4:82073568-82073587 | None:intergenic | 40.0% | |
| GTTAAAAGGAGATCGGAGTT+GGG | - | chr3.4:82070509-82070528 | None:intergenic | 40.0% | |
| GTTATTCGTCCCTGCAAATA+GGG | + | chr3.4:82070973-82070992 | MS.gene013709:intron | 40.0% | |
| GTTATTCGTCCCTGCAAATA+GGG | - | chr3.4:82070992-82070973 | None:intergenic | 40.0% | |
| GTTCACTTATCAGTCACACA+TGG | + | chr3.4:82073571-82073590 | MS.gene013709:intron | 40.0% | |
| GTTTCACCCATATTGATAGG+CGG | + | chr3.4:82073270-82073289 | MS.gene013709:CDS | 40.0% | |
| GTTTCTATCTAACTACCACG+TGG | + | chr3.4:82072786-82072805 | MS.gene013709:intron | 40.0% | |
| TACAGAAGGGGAGAAAGAAA+GGG | + | chr3.4:82073992-82074011 | MS.gene013709:CDS | 40.0% | |
| TATCCTTTGCACACAACTCT+AGG | - | chr3.4:82074202-82074221 | None:intergenic | 40.0% | |
| TGAAGAATTGGTCAGGCAAA+TGG | + | chr3.4:82072955-82072974 | MS.gene013709:CDS | 40.0% | |
| TGTGTTTGAAAAGAGAGAGC+AGG | - | chr3.4:82072546-82072565 | None:intergenic | 40.0% | |
| TGTTAAAAGGAGATCGGAGT+TGG | - | chr3.4:82070510-82070529 | None:intergenic | 40.0% | |
| TGTTATTCGTCCCTGCAAAT+AGG | + | chr3.4:82070972-82070991 | MS.gene013709:intron | 40.0% | |
| TGTTATTCGTCCCTGCAAAT+AGG | - | chr3.4:82070991-82070972 | None:intergenic | 40.0% | |
| TTAAACGACCCCTATTTGCA+GGG | - | chr3.4:82070985-82071004 | None:intergenic | 40.0% | |
| TTATTCGTCCCTGCAAATAG+GGG | + | chr3.4:82070974-82070993 | MS.gene013709:intron | 40.0% | |
| TTATTCGTCCCTGCAAATAG+GGG | - | chr3.4:82070993-82070974 | None:intergenic | 40.0% | |
| TTCATGTCACGGATCAACAA+GGG | + | chr3.4:82072663-82072682 | MS.gene013709:CDS | 40.0% | |
| TTGGGTGAATGAATCAGTCT+AGG | + | chr3.4:82072451-82072470 | MS.gene013709:intron | 40.0% | |
| TTGTGTGCAAAGGATAGAGT+GGG | + | chr3.4:82074206-82074225 | MS.gene013709:CDS | 40.0% | |
| TTTAAACGACCCCTATTTGC+AGG | - | chr3.4:82070986-82071005 | None:intergenic | 40.0% | |
| TTTCATGTCACGGATCAACA+AGG | + | chr3.4:82072662-82072681 | MS.gene013709:CDS | 40.0% | |
| ! | ATTCTACGGATTTTGGACAC+AGG | + | chr3.4:82074169-82074188 | MS.gene013709:intron | 40.0% |
| ! | ATTTTACGTGGATGTGAGGA+TGG | + | chr3.4:82073212-82073231 | MS.gene013709:CDS | 40.0% |
| ! | CCAAATGTTGTTTGCTGATC+GGG | + | chr3.4:82073298-82073317 | MS.gene013709:CDS | 40.0% |
| ! | GCAGTCATTAACTTGGTCAA+GGG | + | chr3.4:82071406-82071425 | MS.gene013709:intron | 40.0% |
| ! | GCAGTCATTAACTTGGTCAA+TGG | - | chr3.4:82071425-82071406 | None:intergenic | 40.0% |
| ! | TTCTACGGATTTTGGACACA+GGG | + | chr3.4:82074170-82074189 | MS.gene013709:intron | 40.0% |
| AACCACGTTAAAATGGAGGC+TGG | - | chr3.4:82073072-82073091 | None:intergenic | 45.0% | |
| AATTGGTCAGGCAAATGGGT+TGG | + | chr3.4:82072960-82072979 | MS.gene013709:CDS | 45.0% | |
| ACCACTTCCAGTAGAATTCC+AGG | - | chr3.4:82071744-82071763 | None:intergenic | 45.0% | |
| ACCTGGAATTCTACTGGAAG+TGG | + | chr3.4:82071740-82071759 | MS.gene013709:CDS | 45.0% | |
| ATCCGATGAGATTGTGGCAT+GGG | - | chr3.4:82073504-82073523 | None:intergenic | 45.0% | |
| ATGGAGTAACGACAACAGAC+AGG | + | chr3.4:82073333-82073352 | MS.gene013709:CDS | 45.0% | |
| ATGGCAACTAGCATTGTCCA+CGG | - | chr3.4:82070767-82070786 | None:intergenic | 45.0% | |
| CACAACTCATATAGAGGCCA+TGG | - | chr3.4:82070858-82070877 | None:intergenic | 45.0% | |
| CATGGCCTCTATATGAGTTG+TGG | + | chr3.4:82070856-82070875 | MS.gene013709:intron | 45.0% | |
| CCCGATCAGCAAACAACATT+TGG | - | chr3.4:82073301-82073320 | None:intergenic | 45.0% | |
| CGTCAATTCCCATGCCATTA+TGG | + | chr3.4:82071367-82071386 | MS.gene013709:intron | 45.0% | |
| CTGAAGTGTGGACTCATAAC+AGG | + | chr3.4:82073096-82073115 | MS.gene013709:CDS | 45.0% | |
| GATATCTCAGACAAGAGACC+AGG | - | chr3.4:82073038-82073057 | None:intergenic | 45.0% | |
| GATGTACCTGCGATGCATAA+GGG | - | chr3.4:82073529-82073548 | None:intergenic | 45.0% | |
| GCAACAAAATCAACCCTCCA+AGG | + | chr3.4:82070009-82070028 | MS.gene013709:CDS | 45.0% | |
| GGAATTGACGAAAATACCCC+TGG | + | chr3.4:82071124-82071143 | MS.gene013709:intron | 45.0% | |
| GGAATTGACGAAAATACCCC+TGG | - | chr3.4:82071143-82071124 | None:intergenic | 45.0% | |
| GGAGCAATGTGACAAACAAG+TGG | - | chr3.4:82071625-82071644 | None:intergenic | 45.0% | |
| GGATGCACACTTGATACAGA+AGG | + | chr3.4:82073978-82073997 | MS.gene013709:CDS | 45.0% | |
| GGTGAAACTCATGGACAAAC+TGG | - | chr3.4:82073258-82073277 | None:intergenic | 45.0% | |
| GTTGTGTGCAAAGGATAGAG+TGG | + | chr3.4:82074205-82074224 | MS.gene013709:CDS | 45.0% | |
| TACCTGCCCTACAAACTGTT+AGG | - | chr3.4:82074271-82074290 | None:intergenic | 45.0% | |
| TAGAGGTCATGAAAGGCTTG+TGG | + | chr3.4:82073667-82073686 | MS.gene013709:intron | 45.0% | |
| TCGGAGTTGGGTAGGTAAAT+TGG | - | chr3.4:82070497-82070516 | None:intergenic | 45.0% | |
| TCTATGTGAGGGATGCATCA+GGG | + | chr3.4:82074324-82074343 | MS.gene013709:CDS | 45.0% | |
| TGACGTGGCAGTCATTAACT+TGG | + | chr3.4:82071399-82071418 | MS.gene013709:intron | 45.0% | |
| TGACGTGGCAGTCATTAACT+TGG | - | chr3.4:82071418-82071399 | None:intergenic | 45.0% | |
| TGAGGAAAAAGGATACTCGG+TGG | + | chr3.4:82073400-82073419 | MS.gene013709:CDS | 45.0% | |
| TGATGTACCTGCGATGCATA+AGG | - | chr3.4:82073530-82073549 | None:intergenic | 45.0% | |
| TGGAGTAACGACAACAGACA+GGG | + | chr3.4:82073334-82073353 | MS.gene013709:CDS | 45.0% | |
| TTAAGCGACCCCTATTTGCA+GGG | + | chr3.4:82071497-82071516 | MS.gene013709:intron | 45.0% | |
| TTCCCATGCCACAATCTCAT+CGG | + | chr3.4:82073499-82073518 | MS.gene013709:CDS | 45.0% | |
| TTCTATGTGAGGGATGCATC+AGG | + | chr3.4:82074323-82074342 | MS.gene013709:CDS | 45.0% | |
| TTCTGATGGAGGATGGTTCA+TGG | + | chr3.4:82071812-82071831 | MS.gene013709:CDS | 45.0% | |
| TTTAAGCGACCCCTATTTGC+AGG | + | chr3.4:82071496-82071515 | MS.gene013709:intron | 45.0% | |
| ! | ATTAAGAGCTTGTTCCCCTC+TGG | - | chr3.4:82074300-82074319 | None:intergenic | 45.0% |
| ! | ATTGGTCAGGCAAATGGGTT+GGG | + | chr3.4:82072961-82072980 | MS.gene013709:CDS | 45.0% |
| ! | GGCAGTCATTAACTTGGTCA+AGG | + | chr3.4:82071405-82071424 | MS.gene013709:intron | 45.0% |
| ! | GTAATTTTCGGCCGGAAAGA+GGG | - | chr3.4:82073368-82073387 | None:intergenic | 45.0% |
| !! | ATTAAAAGTAAAAAAAAATT+CGG | - | chr3.4:82071261-82071280 | None:intergenic | 5.0% |
| !! | TTAAAATTAAAATGTTTAAT+TGG | + | chr3.4:82070627-82070646 | MS.gene013709:intron | 5.0% |
| !!! | TTTATTTTATTTTTGAAATA+CGG | + | chr3.4:82070342-82070361 | MS.gene013709:intron | 5.0% |
| AAAGGAGATCGGAGTTGGGT+AGG | - | chr3.4:82070505-82070524 | None:intergenic | 50.0% | |
| AAGAACCAGAGACACGAGGA+TGG | + | chr3.4:82074438-82074457 | MS.gene013709:CDS | 50.0% | |
| ACGTGGTTGTAGCTGAAGTG+TGG | + | chr3.4:82073084-82073103 | MS.gene013709:CDS | 50.0% | |
| AGAACCAGAGACACGAGGAT+GGG | + | chr3.4:82074439-82074458 | MS.gene013709:CDS | 50.0% | |
| AGGGCAGGTATATCAACCAG+AGG | + | chr3.4:82074281-82074300 | MS.gene013709:CDS | 50.0% | |
| AGGTCATGAAAGGCTTGTGG+AGG | + | chr3.4:82073670-82073689 | MS.gene013709:intron | 50.0% | |
| CGTTAAAATGGAGGCTGGCA+AGG | - | chr3.4:82073067-82073086 | None:intergenic | 50.0% | |
| GACAAAGAACCAGAGACACG+AGG | + | chr3.4:82074434-82074453 | MS.gene013709:CDS | 50.0% | |
| GAGCCTAGAGTTGTGTGCAA+AGG | + | chr3.4:82074196-82074215 | MS.gene013709:CDS | 50.0% | |
| GATCCGATGAGATTGTGGCA+TGG | - | chr3.4:82073505-82073524 | None:intergenic | 50.0% | |
| GATGGAGGATGGTTCATGGA+TGG | + | chr3.4:82071816-82071835 | MS.gene013709:CDS | 50.0% | |
| GGCAGGTATATCAACCAGAG+GGG | + | chr3.4:82074283-82074302 | MS.gene013709:CDS | 50.0% | |
| GGGCAGGTATATCAACCAGA+GGG | + | chr3.4:82074282-82074301 | MS.gene013709:CDS | 50.0% | |
| GTGGAGCCGCCTATCAATAT+GGG | - | chr3.4:82073279-82073298 | None:intergenic | 50.0% | |
| TGACCACATCTCCGACTACA+GGG | - | chr3.4:82072217-82072236 | None:intergenic | 50.0% | |
| TGATGGTACAAGACAAGCCG+TGG | + | chr3.4:82073145-82073164 | MS.gene013709:CDS | 50.0% | |
| ! | GGTAATTTTCGGCCGGAAAG+AGG | - | chr3.4:82073369-82073388 | None:intergenic | 50.0% |
| !! | TGCCAGCCTCCATTTTAACG+TGG | + | chr3.4:82073067-82073086 | MS.gene013709:CDS | 50.0% |
| !! | TTGGTCAGGCAAATGGGTTG+GGG | + | chr3.4:82072962-82072981 | MS.gene013709:CDS | 50.0% |
| AGGGCGATCCGATGAGATTG+TGG | - | chr3.4:82073510-82073529 | None:intergenic | 55.0% | |
| GGATGCATCAGGGAACTCAG+TGG | + | chr3.4:82074334-82074353 | MS.gene013709:CDS | 55.0% | |
| GGCCTAACAGTTTGTAGGGC+AGG | + | chr3.4:82074266-82074285 | MS.gene013709:CDS | 55.0% | |
| GGGAATGTCCTCCCTCTTTC+CGG | + | chr3.4:82073354-82073373 | MS.gene013709:CDS | 55.0% | |
| GGGACGGGACGGTTGTAAAA+TGG | + | chr3.4:82071915-82071934 | MS.gene013709:intron | 55.0% | |
| GGTGGAGCCGCCTATCAATA+TGG | - | chr3.4:82073280-82073299 | None:intergenic | 55.0% | |
| GTGACCACATCTCCGACTAC+AGG | - | chr3.4:82072218-82072237 | None:intergenic | 55.0% | |
| TCTCAGACAAGAGACCAGGG+CGG | - | chr3.4:82073034-82073053 | None:intergenic | 55.0% | |
| TGGTACTCACAGAGGGCTAG+TGG | - | chr3.4:82071590-82071609 | None:intergenic | 55.0% | |
| TGTACTTTGCAGGGTCTCCG+TGG | + | chr3.4:82070747-82070766 | MS.gene013709:intron | 55.0% | |
| TTAGCCCATCCTCGTGTCTC+TGG | - | chr3.4:82074446-82074465 | None:intergenic | 55.0% | |
| ! | ATTTTCGGCCGGAAAGAGGG+AGG | - | chr3.4:82073365-82073384 | None:intergenic | 55.0% |
| ! | TGGGTTGGGGTGCATTCTGT+TGG | + | chr3.4:82072975-82072994 | MS.gene013709:CDS | 55.0% |
| AGTTGTGGCCGCCCTGTAGT+CGG | + | chr3.4:82072203-82072222 | MS.gene013709:intron | 60.0% | |
| CCACATCTCCGACTACAGGG+CGG | - | chr3.4:82072214-82072233 | None:intergenic | 60.0% | |
| GGATCGCCCTTATGCATCGC+AGG | + | chr3.4:82073520-82073539 | MS.gene013709:CDS | 60.0% | |
| CCGCCCTGTAGTCGGAGATG+TGG | + | chr3.4:82072211-82072230 | MS.gene013709:intron | 65.0% | |
| CTAATCGGGAGAGACCGCCC+TGG | + | chr3.4:82073017-82073036 | MS.gene013709:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 82069960 | 82074511 | 82069960 | ID=MS.gene013709 |
| chr3.4 | mRNA | 82069960 | 82074511 | 82069960 | ID=MS.gene013709.t1;Parent=MS.gene013709 |
| chr3.4 | exon | 82069960 | 82070030 | 82069960 | ID=MS.gene013709.t1.exon1;Parent=MS.gene013709.t1 |
| chr3.4 | CDS | 82069960 | 82070030 | 82069960 | ID=cds.MS.gene013709.t1;Parent=MS.gene013709.t1 |
| chr3.4 | exon | 82070759 | 82070804 | 82070759 | ID=MS.gene013709.t1.exon2;Parent=MS.gene013709.t1 |
| chr3.4 | CDS | 82070759 | 82070804 | 82070759 | ID=cds.MS.gene013709.t1;Parent=MS.gene013709.t1 |
| chr3.4 | exon | 82071723 | 82071837 | 82071723 | ID=MS.gene013709.t1.exon3;Parent=MS.gene013709.t1 |
| chr3.4 | CDS | 82071723 | 82071837 | 82071723 | ID=cds.MS.gene013709.t1;Parent=MS.gene013709.t1 |
| chr3.4 | exon | 82072660 | 82072727 | 82072660 | ID=MS.gene013709.t1.exon4;Parent=MS.gene013709.t1 |
| chr3.4 | CDS | 82072660 | 82072727 | 82072660 | ID=cds.MS.gene013709.t1;Parent=MS.gene013709.t1 |
| chr3.4 | exon | 82072921 | 82073541 | 82072921 | ID=MS.gene013709.t1.exon5;Parent=MS.gene013709.t1 |
| chr3.4 | CDS | 82072921 | 82073541 | 82072921 | ID=cds.MS.gene013709.t1;Parent=MS.gene013709.t1 |
| chr3.4 | exon | 82073954 | 82074058 | 82073954 | ID=MS.gene013709.t1.exon6;Parent=MS.gene013709.t1 |
| chr3.4 | CDS | 82073954 | 82074058 | 82073954 | ID=cds.MS.gene013709.t1;Parent=MS.gene013709.t1 |
| chr3.4 | exon | 82074191 | 82074511 | 82074191 | ID=MS.gene013709.t1.exon7;Parent=MS.gene013709.t1 |
| chr3.4 | CDS | 82074191 | 82074511 | 82074191 | ID=cds.MS.gene013709.t1;Parent=MS.gene013709.t1 |
| Gene Sequence |
| Protein sequence |
