Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011698.t1 | XP_003608551.2 | 85.7 | 489 | 62 | 3 | 26 | 508 | 4 | 490 | 3.30E-237 | 830.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011698.t1 | Q9FHP1 | 45.7 | 481 | 241 | 9 | 41 | 506 | 2 | 477 | 2.0e-102 | 374.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011698.t1 | G7JF79 | 85.7 | 489 | 62 | 3 | 26 | 508 | 4 | 490 | 2.4e-237 | 830.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene31860 | MS.gene011698 | PPI |
| MS.gene011698 | MS.gene02506 | PPI |
| MS.gene011698 | MS.gene052926 | PPI |
| MS.gene011698 | MS.gene02630 | PPI |
| MS.gene011698 | MS.gene026670 | PPI |
| MS.gene93159 | MS.gene011698 | PPI |
| MS.gene33646 | MS.gene011698 | PPI |
| MS.gene013709 | MS.gene011698 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011698.t1 | MTR_4g097380 | 85.685 | 489 | 62 | 3 | 26 | 508 | 4 | 490 | 0.0 | 833 |
| MS.gene011698.t1 | MTR_5g015170 | 49.697 | 495 | 213 | 7 | 41 | 508 | 1 | 486 | 1.57e-160 | 465 |
| MS.gene011698.t1 | MTR_3g088885 | 39.243 | 423 | 234 | 8 | 48 | 461 | 7 | 415 | 3.77e-97 | 301 |
| MS.gene011698.t1 | MTR_7g028050 | 38.280 | 465 | 256 | 7 | 50 | 508 | 1 | 440 | 1.80e-96 | 299 |
| MS.gene011698.t1 | MTR_5g047260 | 39.168 | 457 | 233 | 13 | 36 | 475 | 2 | 430 | 2.76e-92 | 288 |
| MS.gene011698.t1 | MTR_1g029520 | 38.806 | 402 | 234 | 5 | 66 | 461 | 254 | 649 | 1.43e-87 | 283 |
| MS.gene011698.t1 | MTR_7g022470 | 35.637 | 463 | 271 | 8 | 50 | 508 | 10 | 449 | 6.29e-87 | 275 |
| MS.gene011698.t1 | MTR_5g011580 | 36.967 | 422 | 225 | 8 | 46 | 458 | 2 | 391 | 4.11e-80 | 257 |
| MS.gene011698.t1 | MTR_4g101950 | 37.010 | 408 | 226 | 5 | 53 | 456 | 9 | 389 | 3.85e-79 | 254 |
| MS.gene011698.t1 | MTR_5g047260 | 38.961 | 385 | 188 | 13 | 36 | 401 | 2 | 358 | 4.07e-72 | 233 |
| MS.gene011698.t1 | MTR_5g047260 | 42.020 | 307 | 150 | 9 | 36 | 337 | 2 | 285 | 3.88e-69 | 224 |
| MS.gene011698.t1 | MTR_7g028050 | 36.023 | 347 | 200 | 5 | 166 | 508 | 9 | 337 | 1.85e-59 | 199 |
| MS.gene011698.t1 | MTR_1g012740 | 41.509 | 106 | 53 | 4 | 41 | 140 | 1 | 103 | 2.66e-15 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011698.t1 | AT5G65890 | 45.946 | 481 | 240 | 10 | 41 | 506 | 2 | 477 | 1.24e-127 | 380 |
| MS.gene011698.t1 | AT5G65890 | 45.946 | 481 | 240 | 10 | 41 | 506 | 2 | 477 | 1.24e-127 | 380 |
| MS.gene011698.t1 | AT5G65890 | 43.488 | 430 | 222 | 9 | 93 | 506 | 1 | 425 | 4.98e-101 | 310 |
| MS.gene011698.t1 | AT5G65890 | 43.488 | 430 | 222 | 9 | 93 | 506 | 1 | 425 | 4.98e-101 | 310 |
| MS.gene011698.t1 | AT1G76990 | 40.878 | 433 | 225 | 9 | 41 | 461 | 1 | 414 | 3.93e-100 | 309 |
| MS.gene011698.t1 | AT1G76990 | 40.878 | 433 | 225 | 9 | 41 | 461 | 1 | 414 | 3.93e-100 | 309 |
| MS.gene011698.t1 | AT1G76990 | 40.878 | 433 | 225 | 9 | 41 | 461 | 1 | 414 | 3.93e-100 | 309 |
| MS.gene011698.t1 | AT1G76990 | 40.878 | 433 | 225 | 9 | 41 | 461 | 1 | 414 | 3.93e-100 | 309 |
| MS.gene011698.t1 | AT1G76990 | 40.878 | 433 | 225 | 9 | 41 | 461 | 1 | 414 | 3.93e-100 | 309 |
| MS.gene011698.t1 | AT1G69040 | 38.155 | 477 | 262 | 11 | 40 | 508 | 2 | 453 | 6.14e-94 | 293 |
| MS.gene011698.t1 | AT1G69040 | 38.544 | 467 | 255 | 10 | 50 | 508 | 7 | 449 | 9.85e-94 | 292 |
| MS.gene011698.t1 | AT5G25320 | 36.508 | 504 | 266 | 12 | 48 | 507 | 7 | 500 | 1.68e-93 | 293 |
| MS.gene011698.t1 | AT4G22780 | 40.291 | 412 | 207 | 7 | 53 | 456 | 9 | 389 | 9.28e-89 | 280 |
| MS.gene011698.t1 | AT4G22780 | 40.291 | 412 | 207 | 7 | 53 | 456 | 9 | 389 | 9.28e-89 | 280 |
| MS.gene011698.t1 | AT3G01990 | 38.647 | 414 | 227 | 7 | 51 | 458 | 3 | 395 | 2.94e-87 | 275 |
| MS.gene011698.t1 | AT3G01990 | 38.647 | 414 | 227 | 7 | 51 | 458 | 3 | 395 | 2.94e-87 | 275 |
| MS.gene011698.t1 | AT3G01990 | 38.647 | 414 | 227 | 7 | 51 | 458 | 3 | 395 | 3.47e-87 | 275 |
| MS.gene011698.t1 | AT2G03730 | 37.131 | 474 | 257 | 12 | 49 | 508 | 10 | 456 | 3.67e-87 | 276 |
| MS.gene011698.t1 | AT2G03730 | 37.131 | 474 | 257 | 12 | 49 | 508 | 10 | 456 | 3.67e-87 | 276 |
| MS.gene011698.t1 | AT3G01990 | 38.647 | 414 | 227 | 7 | 51 | 458 | 17 | 409 | 3.71e-87 | 275 |
| MS.gene011698.t1 | AT3G01990 | 38.647 | 414 | 227 | 7 | 51 | 458 | 17 | 409 | 3.71e-87 | 275 |
| MS.gene011698.t1 | AT3G01990 | 38.647 | 414 | 227 | 7 | 51 | 458 | 17 | 409 | 5.36e-87 | 275 |
| MS.gene011698.t1 | AT1G12420 | 36.797 | 462 | 255 | 7 | 53 | 508 | 9 | 439 | 3.57e-85 | 270 |
| MS.gene011698.t1 | AT5G25320 | 35.319 | 470 | 254 | 11 | 79 | 507 | 1 | 461 | 9.67e-82 | 261 |
| MS.gene011698.t1 | AT5G65890 | 42.241 | 348 | 188 | 7 | 170 | 506 | 18 | 363 | 1.77e-75 | 242 |
| MS.gene011698.t1 | AT5G25320 | 39.142 | 373 | 183 | 10 | 48 | 385 | 7 | 370 | 1.78e-69 | 227 |
| MS.gene011698.t1 | AT3G01990 | 38.261 | 345 | 184 | 7 | 51 | 388 | 17 | 339 | 1.48e-66 | 218 |
| MS.gene011698.t1 | AT3G01990 | 38.261 | 345 | 184 | 7 | 51 | 388 | 17 | 339 | 1.56e-66 | 218 |
| MS.gene011698.t1 | AT3G01990 | 38.372 | 344 | 185 | 7 | 51 | 388 | 3 | 325 | 1.56e-66 | 218 |
| MS.gene011698.t1 | AT3G01990 | 40.690 | 290 | 147 | 6 | 51 | 337 | 3 | 270 | 2.92e-61 | 203 |
| MS.gene011698.t1 | AT3G01990 | 40.690 | 290 | 147 | 6 | 51 | 337 | 17 | 284 | 3.04e-61 | 204 |
| MS.gene011698.t1 | AT1G12420 | 33.668 | 398 | 227 | 7 | 117 | 508 | 1 | 367 | 2.66e-59 | 200 |
Find 133 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTCACAATTCTCTTTATA+TGG | 0.213801 | 8.3:-22395011 | MS.gene011698:CDS |
| TGCAATGTTGCAGGGATTAA+AGG | 0.229472 | 8.3:-22395242 | MS.gene011698:intron |
| AGCGTCTCATCAACAATTTC+AGG | 0.251482 | 8.3:-22394904 | MS.gene011698:CDS |
| TTTCTCTCCCCTTCCTTCAT+TGG | 0.266843 | 8.3:+22396339 | None:intergenic |
| CCATTGTTTCGTAGAGGATA+TGG | 0.274112 | 8.3:-22397525 | MS.gene011698:CDS |
| TTCTGATGGCGGATGGTTAA+TGG | 0.291811 | 8.3:-22397033 | MS.gene011698:CDS |
| GCTTCTGATTAAGATCTAAT+TGG | 0.298334 | 8.3:+22394881 | None:intergenic |
| ATCAGAAGAAATGTATGATT+TGG | 0.303876 | 8.3:+22397049 | None:intergenic |
| TCTATAACAAGAATTGAGTT+TGG | 0.333688 | 8.3:-22395148 | MS.gene011698:CDS |
| TTGCTATTGGAAGCATGATT+TGG | 0.335740 | 8.3:-22394937 | MS.gene011698:CDS |
| GATACGAGGGGCGAGATTAC+TGG | 0.336479 | 8.3:-22396144 | MS.gene011698:CDS |
| AACATCTCTACTATTGTTAC+TGG | 0.356942 | 8.3:+22394970 | None:intergenic |
| ATCGTTGATTGGCCCAGGTC+TGG | 0.363632 | 8.3:+22396411 | None:intergenic |
| TTCTATGTTACAGATTGTTC+AGG | 0.369312 | 8.3:-22395097 | MS.gene011698:CDS |
| AATTGGTGGTTCAGTTGCTT+TGG | 0.375279 | 8.3:-22395032 | MS.gene011698:CDS |
| GCAGCTATGGAATCTTTGTT+AGG | 0.380890 | 8.3:-22397598 | MS.gene011698:CDS |
| CATTGGCCTCTATCACATTC+CGG | 0.382607 | 8.3:+22396356 | None:intergenic |
| CATGCCTGCCACGGGGATAA+TGG | 0.385693 | 8.3:-22396214 | MS.gene011698:CDS |
| TTCTGCCATGGGGCTGTTTG+AGG | 0.387039 | 8.3:+22396028 | None:intergenic |
| ATCCGTTCCTATCACCTCTA+TGG | 0.404945 | 8.3:+22396555 | None:intergenic |
| CACCGGCTGCGTACATCATC+TGG | 0.407191 | 8.3:+22396251 | None:intergenic |
| AGAGATATCAGTGGTACTAA+TGG | 0.411256 | 8.3:-22396515 | MS.gene011698:CDS |
| AATCGCTCTCTATCGTTGAT+TGG | 0.426266 | 8.3:+22396400 | None:intergenic |
| TGTATGATTTGGAAATTGTA+AGG | 0.426999 | 8.3:+22397060 | None:intergenic |
| AAACAGCCCCATGGCAGAAC+AGG | 0.434204 | 8.3:-22396024 | MS.gene011698:intron |
| ATTAGCACTCAAAACAAAAC+GGG | 0.440329 | 8.3:-22395214 | MS.gene011698:CDS |
| TATAGCAGCGATTAAACATA+AGG | 0.449093 | 8.3:+22395423 | None:intergenic |
| TGTTACAGATTGTTCAGGTC+AGG | 0.451595 | 8.3:-22395092 | MS.gene011698:CDS |
| AAATCATACATTTCTTCTGA+TGG | 0.460360 | 8.3:-22397047 | MS.gene011698:CDS |
| TGGAGTACCTGTTCTGCCAT+GGG | 0.465527 | 8.3:+22396017 | None:intergenic |
| GAGCACAAAAGGCGGTATGA+TGG | 0.467835 | 8.3:-22396187 | MS.gene011698:CDS |
| AACTTTGTCATGATGGGTCC+AGG | 0.467895 | 8.3:+22396462 | None:intergenic |
| CGTATCTATCCACTGAAACA+TGG | 0.468562 | 8.3:+22396161 | None:intergenic |
| ATCAGTGGTACTAATGGACT+TGG | 0.469012 | 8.3:-22396509 | MS.gene011698:CDS |
| ACCGCCATTATCCCCGTGGC+AGG | 0.470635 | 8.3:+22396210 | None:intergenic |
| ATGGCAACATTTGCTTCTTG+TGG | 0.473553 | 8.3:+22396574 | None:intergenic |
| CCAGGTCTGGATGCATCCTC+CGG | 0.476009 | 8.3:+22396424 | None:intergenic |
| CCGGAGGATGCATCCAGACC+TGG | 0.479668 | 8.3:-22396424 | MS.gene011698:CDS |
| ATAATGGCGGTGAGCACAAA+AGG | 0.480235 | 8.3:-22396198 | MS.gene011698:CDS |
| TTCCATGTGAAGGATCAGAT+AGG | 0.483105 | 8.3:-22396925 | MS.gene011698:CDS |
| GAAGGGGAGAGAAAGATATG+AGG | 0.483444 | 8.3:-22396330 | MS.gene011698:CDS |
| GGTCTAGATCTGTCAACGTC+TGG | 0.484026 | 8.3:+22397081 | None:intergenic |
| TCCGGATCTGATCCACGACT+TGG | 0.485359 | 8.3:+22396374 | None:intergenic |
| AGCACAAAAGGCGGTATGAT+GGG | 0.485604 | 8.3:-22396186 | MS.gene011698:CDS |
| CCCAAGTCGTGGATCAGATC+CGG | 0.485712 | 8.3:-22396375 | MS.gene011698:CDS |
| AGTTGCATGCATTATCTATC+CGG | 0.496145 | 8.3:-22396443 | MS.gene011698:CDS |
| TCTCTATCGTTGATTGGCCC+AGG | 0.496551 | 8.3:+22396406 | None:intergenic |
| TGCATGCAACTTTGTCATGA+TGG | 0.497131 | 8.3:+22396455 | None:intergenic |
| ACAATATCAAACAACAACTT+AGG | 0.497406 | 8.3:+22396094 | None:intergenic |
| CATTAGCACTCAAAACAAAA+CGG | 0.498818 | 8.3:-22395215 | MS.gene011698:CDS |
| GATATCTCTGAAAACAAGCC+AGG | 0.502489 | 8.3:+22396529 | None:intergenic |
| GGTATGACTGTGACCGGTGG+TGG | 0.502522 | 8.3:+22396288 | None:intergenic |
| AAGAATTGAGTTTGGAGTAG+AGG | 0.506027 | 8.3:-22395140 | MS.gene011698:CDS |
| AAACACACATGGGATACTAT+TGG | 0.508487 | 8.3:-22397111 | MS.gene011698:CDS |
| AGAGTTGTCATGCCTGCCAC+GGG | 0.509705 | 8.3:-22396222 | MS.gene011698:CDS |
| GGTCGGTGAATGTGAGAAGC+CGG | 0.511766 | 8.3:-22396123 | MS.gene011698:CDS |
| CTGGAGTACCTGTTCTGCCA+TGG | 0.511849 | 8.3:+22396016 | None:intergenic |
| CTCTATCGATGTGAGGCTGC+TGG | 0.518271 | 8.3:+22397492 | None:intergenic |
| CCGTTCGGTATGACTGTGAC+CGG | 0.520048 | 8.3:+22396282 | None:intergenic |
| ACATCATATCTGCAAAAGCC+TGG | 0.524651 | 8.3:-22396480 | MS.gene011698:CDS |
| GTTTCTGAACTATGCAGCTA+TGG | 0.525263 | 8.3:-22397611 | MS.gene011698:CDS |
| GTATCTATCCACTGAAACAT+GGG | 0.527029 | 8.3:+22396162 | None:intergenic |
| GATTATATTTAGAACTACCT+TGG | 0.527210 | 8.3:+22395476 | None:intergenic |
| CATCTGGTGGAGCCTCCGTT+CGG | 0.533464 | 8.3:+22396267 | None:intergenic |
| ATGCTTCCAATAGCAAAAGT+TGG | 0.535215 | 8.3:+22394944 | None:intergenic |
| GTAGAGGATGAAACAGCAAT+AGG | 0.536431 | 8.3:-22395124 | MS.gene011698:CDS |
| ACACGCGTAATTCATGAGAA+TGG | 0.538292 | 8.3:-22395175 | MS.gene011698:CDS |
| TCAGATCCGGAATGTGATAG+AGG | 0.538363 | 8.3:-22396362 | MS.gene011698:CDS |
| ACATTTCTTCTGATGGCGGA+TGG | 0.545160 | 8.3:-22397040 | MS.gene011698:CDS |
| AGAAGCAAATGTTGCCATAG+AGG | 0.545216 | 8.3:-22396569 | MS.gene011698:CDS |
| CAGAAACTGCACGGTGGTGA+AGG | 0.545407 | 8.3:-22397248 | MS.gene011698:intron |
| CACCAGATGATGTACGCAGC+CGG | 0.553985 | 8.3:-22396253 | MS.gene011698:CDS |
| TCCATGTGAAGGATCAGATA+GGG | 0.556332 | 8.3:-22396924 | MS.gene011698:CDS |
| GTCGGTGAATGTGAGAAGCC+GGG | 0.557556 | 8.3:-22396122 | MS.gene011698:CDS |
| AATGTTGCCATAGAGGTGAT+AGG | 0.562183 | 8.3:-22396562 | MS.gene011698:CDS |
| TCTCGTGAATCACATTGAGC+AGG | 0.562429 | 8.3:-22396881 | MS.gene011698:intron |
| TGATAGAGGCCAATGAAGGA+AGG | 0.566933 | 8.3:-22396348 | MS.gene011698:CDS |
| TAGTATAGTACCTAGGTGGA+TGG | 0.567313 | 8.3:+22397444 | None:intergenic |
| AACAGTGCAACACTGTTGCA+AGG | 0.570985 | 8.3:-22396599 | MS.gene011698:CDS |
| GCGTGCTCACATGCAATATG+AGG | 0.577713 | 8.3:-22396069 | MS.gene011698:CDS |
| TCCCTATCTGATCCTTCACA+TGG | 0.579315 | 8.3:+22396923 | None:intergenic |
| CGGAGGATGCATCCAGACCT+GGG | 0.580119 | 8.3:-22396423 | MS.gene011698:CDS |
| ACAACAACTTAGGACGATCC+CGG | 0.582160 | 8.3:+22396104 | None:intergenic |
| GAGAGTTGTCATGCCTGCCA+CGG | 0.582444 | 8.3:-22396223 | MS.gene011698:CDS |
| GTGATAGGAACGGATCAACC+TGG | 0.590820 | 8.3:-22396547 | MS.gene011698:CDS |
| CGGCTGCGTACATCATCTGG+TGG | 0.590925 | 8.3:+22396254 | None:intergenic |
| ATAGAGGCCAATGAAGGAAG+GGG | 0.594093 | 8.3:-22396346 | MS.gene011698:CDS |
| GCATGCAACTTTGTCATGAT+GGG | 0.595221 | 8.3:+22396456 | None:intergenic |
| CCGGATCTGATCCACGACTT+GGG | 0.597922 | 8.3:+22396375 | None:intergenic |
| TCATACATTTCTTCTGATGG+CGG | 0.599693 | 8.3:-22397044 | MS.gene011698:CDS |
| AATGTGATAGAGGCCAATGA+AGG | 0.600130 | 8.3:-22396352 | MS.gene011698:CDS |
| TGATGGGGCCCATGTTTCAG+TGG | 0.600905 | 8.3:-22396170 | MS.gene011698:CDS |
| GTTGAACCATTGTTTCGTAG+AGG | 0.602637 | 8.3:-22397531 | MS.gene011698:CDS |
| GATAGAGGCCAATGAAGGAA+GGG | 0.603133 | 8.3:-22396347 | MS.gene011698:CDS |
| ATTATCAGCCAACAAAACTC+AGG | 0.608881 | 8.3:-22397553 | MS.gene011698:CDS |
| ATTGATAGAGCAAACACACA+TGG | 0.612436 | 8.3:-22397122 | MS.gene011698:CDS |
| ACATGGGATACTATTGGAGA+TGG | 0.616958 | 8.3:-22397105 | MS.gene011698:CDS |
| CCATATCCTCTACGAAACAA+TGG | 0.621848 | 8.3:+22397525 | None:intergenic |
| ACAGTGCAACACTGTTGCAA+GGG | 0.628413 | 8.3:-22396598 | MS.gene011698:CDS |
| GCACAAAAGGCGGTATGATG+GGG | 0.631001 | 8.3:-22396185 | MS.gene011698:CDS |
| GATAATCGATGACTGATGCA+TGG | 0.633541 | 8.3:+22397570 | None:intergenic |
| GCCTGCCACGGGGATAATGG+CGG | 0.633723 | 8.3:-22396211 | MS.gene011698:CDS |
| AGAGCGATTAGCCCAAGTCG+TGG | 0.638739 | 8.3:-22396386 | MS.gene011698:CDS |
| ACAACAAAACCGAAAAGCAA+AGG | 0.638898 | 8.3:-22395450 | MS.gene011698:CDS |
| AAGAAAGAATCCATCCACCT+AGG | 0.641830 | 8.3:-22397454 | MS.gene011698:intron |
| TGCCATAGAGGTGATAGGAA+CGG | 0.641917 | 8.3:-22396557 | MS.gene011698:CDS |
| GTTTCAGTGGATAGATACGA+GGG | 0.644538 | 8.3:-22396157 | MS.gene011698:CDS |
| TGATTCATGCAGAAACTGCA+CGG | 0.646213 | 8.3:-22397257 | MS.gene011698:CDS |
| TCAGTGGTACTAATGGACTT+GGG | 0.647191 | 8.3:-22396508 | MS.gene011698:CDS |
| GGAGTACCTGTTCTGCCATG+GGG | 0.647486 | 8.3:+22396018 | None:intergenic |
| TCAATTTCTCTATCGATGTG+AGG | 0.653378 | 8.3:+22397485 | None:intergenic |
| TTGATAGAGCAAACACACAT+GGG | 0.653467 | 8.3:-22397121 | MS.gene011698:CDS |
| ATGACAACTCTCGTAGTCAC+CGG | 0.657396 | 8.3:+22396234 | None:intergenic |
| TGTTACCTCAAACAGCCCCA+TGG | 0.664469 | 8.3:-22396033 | MS.gene011698:CDS |
| TGCATGCATTATCTATCCGG+AGG | 0.669422 | 8.3:-22396440 | MS.gene011698:CDS |
| TGTTTCAGTGGATAGATACG+AGG | 0.681409 | 8.3:-22396158 | MS.gene011698:CDS |
| GAGTACTTTATAAGGAACCA+AGG | 0.682714 | 8.3:-22395493 | MS.gene011698:intron |
| CCGGTCACAGTCATACCGAA+CGG | 0.683868 | 8.3:-22396282 | MS.gene011698:CDS |
| AACTTAGTATAGTACCTAGG+TGG | 0.691109 | 8.3:+22397440 | None:intergenic |
| CAAAACGGGGATACTATCGA+AGG | 0.692191 | 8.3:-22395200 | MS.gene011698:CDS |
| ATGGCGGTGAGCACAAAAGG+CGG | 0.698927 | 8.3:-22396195 | MS.gene011698:CDS |
| ACTATTGTTACTGGATGACG+AGG | 0.699074 | 8.3:+22394979 | None:intergenic |
| TTCGGTATGACTGTGACCGG+TGG | 0.700481 | 8.3:+22396285 | None:intergenic |
| GCTCACCGCCATTATCCCCG+TGG | 0.702272 | 8.3:+22396206 | None:intergenic |
| GTCACAGTCATACCGAACGG+AGG | 0.707524 | 8.3:-22396279 | MS.gene011698:CDS |
| AATTGTTGATGAGACGCTCG+AGG | 0.729605 | 8.3:+22394909 | None:intergenic |
| GCAATATGAGGTGTTTCATG+CGG | 0.731122 | 8.3:-22396057 | MS.gene011698:CDS |
| GATGGCGGATGGTTAATGGA+TGG | 0.732506 | 8.3:-22397029 | MS.gene011698:intron |
| TTAGCACTCAAAACAAAACG+GGG | 0.740475 | 8.3:-22395213 | MS.gene011698:CDS |
| TTTCAGTGGATAGATACGAG+GGG | 0.743621 | 8.3:-22396156 | MS.gene011698:CDS |
| CGAGGGGCGAGATTACTGGT+CGG | 0.745864 | 8.3:-22396140 | MS.gene011698:CDS |
| GAGTTGTCATGCCTGCCACG+GGG | 0.748483 | 8.3:-22396221 | MS.gene011698:CDS |
| TTCATGCAGAAACTGCACGG+TGG | 0.839251 | 8.3:-22397254 | MS.gene011698:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATTAATTGAAAAATC+TGG | + | chr8.3:22396521-22396540 | None:intergenic | 10.0% |
| !! | AATTAAGTAAAGTTAAATTA+AGG | + | chr8.3:22395313-22395332 | None:intergenic | 10.0% |
| !! | ATCAAAACCTAATTTAAATA+TGG | + | chr8.3:22396783-22396802 | None:intergenic | 15.0% |
| !! | GTTAAGATTAATAATAGTAT+CGG | + | chr8.3:22397203-22397222 | None:intergenic | 15.0% |
| !!! | ATGATGATGAATTAATATTT+TGG | + | chr8.3:22396852-22396871 | None:intergenic | 15.0% |
| !!! | TTTTCAATTAATTATTTGCA+AGG | - | chr8.3:22396524-22396543 | MS.gene011698:CDS | 15.0% |
| !! | AAAAAAAGTAACCAAGTTAT+TGG | - | chr8.3:22396676-22396695 | MS.gene011698:intron | 20.0% |
| !! | AAACCTAATTTAAATATGGT+TGG | + | chr8.3:22396779-22396798 | None:intergenic | 20.0% |
| !! | AACCTAATTTAAATATGGTT+GGG | + | chr8.3:22396778-22396797 | None:intergenic | 20.0% |
| !! | TCAATACTCTAATTTAAAGA+CGG | + | chr8.3:22396977-22396996 | None:intergenic | 20.0% |
| !!! | AAATAGTGCATATCTTTTTT+GGG | + | chr8.3:22395144-22395163 | None:intergenic | 20.0% |
| !!! | GAATAGACTTTAAAATGATA+AGG | - | chr8.3:22396633-22396652 | MS.gene011698:CDS | 20.0% |
| !!! | TGCAATTCTAAGATTATTTT+TGG | - | chr8.3:22395556-22395575 | MS.gene011698:intron | 20.0% |
| ! | AAATCATACATTTCTTCTGA+TGG | - | chr8.3:22395468-22395487 | MS.gene011698:CDS | 25.0% |
| ! | ACAATATCAAACAACAACTT+AGG | + | chr8.3:22396424-22396443 | None:intergenic | 25.0% |
| ! | ATATATGAAACAAGAAACAC+GGG | + | chr8.3:22395217-22395236 | None:intergenic | 25.0% |
| ! | ATCACTATTCAATTAATGTG+TGG | - | chr8.3:22396600-22396619 | MS.gene011698:CDS | 25.0% |
| ! | ATCAGAAGAAATGTATGATT+TGG | + | chr8.3:22395469-22395488 | None:intergenic | 25.0% |
| ! | CAATACTCTAATTTAAAGAC+GGG | + | chr8.3:22396976-22396995 | None:intergenic | 25.0% |
| ! | CATATATGAAACAAGAAACA+CGG | + | chr8.3:22395218-22395237 | None:intergenic | 25.0% |
| ! | TAATTTAAATATGGTTGGGA+GGG | + | chr8.3:22396774-22396793 | None:intergenic | 25.0% |
| ! | TCTATAACAAGAATTGAGTT+TGG | - | chr8.3:22397367-22397386 | MS.gene011698:intron | 25.0% |
| ! | TTAAAGTCTATTCATGTTTG+TGG | + | chr8.3:22396626-22396645 | None:intergenic | 25.0% |
| ! | TTGATAAAAAGAGAAATTGG+TGG | - | chr8.3:22397469-22397488 | MS.gene011698:CDS | 25.0% |
| !! | ATATTGGTGCAATTTTTATG+TGG | - | chr8.3:22396556-22396575 | MS.gene011698:CDS | 25.0% |
| !! | GATTATATTTAGAACTACCT+TGG | + | chr8.3:22397042-22397061 | None:intergenic | 25.0% |
| !! | TGTATGATTTGGAAATTGTA+AGG | + | chr8.3:22395458-22395477 | None:intergenic | 25.0% |
| !! | TTGGATTTTTGCATTTACAA+TGG | - | chr8.3:22397170-22397189 | MS.gene011698:intron | 25.0% |
| !!! | CAAATAGTGCATATCTTTTT+TGG | + | chr8.3:22395145-22395164 | None:intergenic | 25.0% |
| !!! | GAGTTGATAAAAAGAGAAAT+TGG | - | chr8.3:22397466-22397485 | MS.gene011698:CDS | 25.0% |
| AACATCTCTACTATTGTTAC+TGG | + | chr8.3:22397548-22397567 | None:intergenic | 30.0% | |
| AATTTAAATATGGTTGGGAG+GGG | + | chr8.3:22396773-22396792 | None:intergenic | 30.0% | |
| ACAAACTTAGTATAGTACCT+AGG | + | chr8.3:22395081-22395100 | None:intergenic | 30.0% | |
| ATTAGCACTCAAAACAAAAC+GGG | - | chr8.3:22397301-22397320 | MS.gene011698:intron | 30.0% | |
| CATTAGCACTCAAAACAAAA+CGG | - | chr8.3:22397300-22397319 | MS.gene011698:intron | 30.0% | |
| CTAATTTAAATATGGTTGGG+AGG | + | chr8.3:22396775-22396794 | None:intergenic | 30.0% | |
| CTCCCAACCATATTTAAATT+AGG | - | chr8.3:22396773-22396792 | MS.gene011698:intron | 30.0% | |
| GGTTCACAATTCTCTTTATA+TGG | - | chr8.3:22397504-22397523 | MS.gene011698:CDS | 30.0% | |
| TATAGCAGCGATTAAACATA+AGG | + | chr8.3:22397095-22397114 | None:intergenic | 30.0% | |
| TATCAATCTGTGAACACAAA+TGG | + | chr8.3:22395380-22395399 | None:intergenic | 30.0% | |
| TATTTGATTGTTAGTTCAGC+CGG | - | chr8.3:22395159-22395178 | MS.gene011698:CDS | 30.0% | |
| TGCAAGGACAAAAGATATAT+TGG | - | chr8.3:22396540-22396559 | MS.gene011698:CDS | 30.0% | |
| TGTACACATTGTTTATGTTG+AGG | + | chr8.3:22395531-22395550 | None:intergenic | 30.0% | |
| TTCTATGTTACAGATTGTTC+AGG | - | chr8.3:22397418-22397437 | MS.gene011698:intron | 30.0% | |
| TTGCTCTCATATTTCATGTT+TGG | - | chr8.3:22395666-22395685 | MS.gene011698:intron | 30.0% | |
| ! | AGATTAGTCATCGCAAATAT+TGG | + | chr8.3:22396715-22396734 | None:intergenic | 30.0% |
| ! | TCTTGTTTCATATATGTGCA+GGG | - | chr8.3:22395222-22395241 | MS.gene011698:CDS | 30.0% |
| ! | TTCTTGTTTCATATATGTGC+AGG | - | chr8.3:22395221-22395240 | MS.gene011698:CDS | 30.0% |
| !! | GTTATACCAACTTTTGCTAT+TGG | - | chr8.3:22397565-22397584 | MS.gene011698:CDS | 30.0% |
| !! | TTACACAGGAGTACTTTATA+AGG | - | chr8.3:22397014-22397033 | MS.gene011698:intron | 30.0% |
| AAACACACATGGGATACTAT+TGG | - | chr8.3:22395404-22395423 | MS.gene011698:intron | 35.0% | |
| AACTTAGTATAGTACCTAGG+TGG | + | chr8.3:22395078-22395097 | None:intergenic | 35.0% | |
| ACAACAAAACCGAAAAGCAA+AGG | - | chr8.3:22397065-22397084 | MS.gene011698:CDS | 35.0% | |
| AGAGATATCAGTGGTACTAA+TGG | - | chr8.3:22396000-22396019 | MS.gene011698:intron | 35.0% | |
| AGTTGCATGCATTATCTATC+CGG | - | chr8.3:22396072-22396091 | MS.gene011698:CDS | 35.0% | |
| ATGCTTCCAATAGCAAAAGT+TGG | + | chr8.3:22397574-22397593 | None:intergenic | 35.0% | |
| ATTATCAGCCAACAAAACTC+AGG | - | chr8.3:22394962-22394981 | MS.gene011698:CDS | 35.0% | |
| ATTGATAGAGCAAACACACA+TGG | - | chr8.3:22395393-22395412 | MS.gene011698:intron | 35.0% | |
| CAATGTATCATGTGTTACAC+AGG | - | chr8.3:22397000-22397019 | MS.gene011698:intron | 35.0% | |
| GAGTACTTTATAAGGAACCA+AGG | - | chr8.3:22397022-22397041 | MS.gene011698:intron | 35.0% | |
| GTATCTATCCACTGAAACAT+GGG | + | chr8.3:22396356-22396375 | None:intergenic | 35.0% | |
| TATTGCATTGCAATGTTGCA+GGG | - | chr8.3:22397265-22397284 | MS.gene011698:CDS | 35.0% | |
| TCAATTTCTCTATCGATGTG+AGG | + | chr8.3:22395033-22395052 | None:intergenic | 35.0% | |
| TCATACATTTCTTCTGATGG+CGG | - | chr8.3:22395471-22395490 | MS.gene011698:CDS | 35.0% | |
| TCCAATAACAAAAGCCTTCA+AGG | + | chr8.3:22397155-22397174 | None:intergenic | 35.0% | |
| TTAATCCATAGCATGAACTC+CGG | + | chr8.3:22395181-22395200 | None:intergenic | 35.0% | |
| TTAGCACTCAAAACAAAACG+GGG | - | chr8.3:22397302-22397321 | MS.gene011698:intron | 35.0% | |
| TTAGTCATCGCAAATATTGG+TGG | + | chr8.3:22396712-22396731 | None:intergenic | 35.0% | |
| TTATTGCATTGCAATGTTGC+AGG | - | chr8.3:22397264-22397283 | MS.gene011698:CDS | 35.0% | |
| TTGATAGAGCAAACACACAT+GGG | - | chr8.3:22395394-22395413 | MS.gene011698:intron | 35.0% | |
| TTTGCATTTACAATGGTTCC+TGG | - | chr8.3:22397177-22397196 | MS.gene011698:intron | 35.0% | |
| ! | AAGAATTGAGTTTGGAGTAG+AGG | - | chr8.3:22397375-22397394 | MS.gene011698:intron | 35.0% |
| ! | TTGCTATTGGAAGCATGATT+TGG | - | chr8.3:22397578-22397597 | MS.gene011698:CDS | 35.0% |
| !! | ACCTTGAAGGCTTTTGTTAT+TGG | - | chr8.3:22397151-22397170 | MS.gene011698:intron | 35.0% |
| !! | CTTGTTTTCAGAGATATCAG+TGG | - | chr8.3:22395991-22396010 | MS.gene011698:intron | 35.0% |
| !! | GATTAATAATAGTATCGGCC+AGG | + | chr8.3:22397198-22397217 | None:intergenic | 35.0% |
| AAGAAAGAATCCATCCACCT+AGG | - | chr8.3:22395061-22395080 | MS.gene011698:CDS | 40.0% | |
| AATCGCTCTCTATCGTTGAT+TGG | + | chr8.3:22396118-22396137 | None:intergenic | 40.0% | |
| AATGTGATAGAGGCCAATGA+AGG | - | chr8.3:22396163-22396182 | MS.gene011698:CDS | 40.0% | |
| AATGTTGCCATAGAGGTGAT+AGG | - | chr8.3:22395953-22395972 | MS.gene011698:intron | 40.0% | |
| ACACGCGTAATTCATGAGAA+TGG | - | chr8.3:22397340-22397359 | MS.gene011698:intron | 40.0% | |
| ACATCATATCTGCAAAAGCC+TGG | - | chr8.3:22396035-22396054 | MS.gene011698:CDS | 40.0% | |
| ACATGGGATACTATTGGAGA+TGG | - | chr8.3:22395410-22395429 | MS.gene011698:CDS | 40.0% | |
| ACGACGAGAGATATTGAACT+AGG | + | chr8.3:22395110-22395129 | None:intergenic | 40.0% | |
| ACTATTGTTACTGGATGACG+AGG | + | chr8.3:22397539-22397558 | None:intergenic | 40.0% | |
| AGAAGCAAATGTTGCCATAG+AGG | - | chr8.3:22395946-22395965 | MS.gene011698:intron | 40.0% | |
| AGCCTTCAAGGTATGAATCA+TGG | + | chr8.3:22397143-22397162 | None:intergenic | 40.0% | |
| AGCGTCTCATCAACAATTTC+AGG | - | chr8.3:22397611-22397630 | MS.gene011698:CDS | 40.0% | |
| ATGGCAACATTTGCTTCTTG+TGG | + | chr8.3:22395944-22395963 | None:intergenic | 40.0% | |
| ATGTTAAAAAGCTCCACCAC+CGG | - | chr8.3:22396214-22396233 | MS.gene011698:CDS | 40.0% | |
| CCATATCCTCTACGAAACAA+TGG | + | chr8.3:22394993-22395012 | None:intergenic | 40.0% | |
| CCATTGTTTCGTAGAGGATA+TGG | - | chr8.3:22394990-22395009 | MS.gene011698:CDS | 40.0% | |
| CGTATCTATCCACTGAAACA+TGG | + | chr8.3:22396357-22396376 | None:intergenic | 40.0% | |
| GATAATCGATGACTGATGCA+TGG | + | chr8.3:22394948-22394967 | None:intergenic | 40.0% | |
| GCAGCTATGGAATCTTTGTT+AGG | - | chr8.3:22394917-22394936 | MS.gene011698:CDS | 40.0% | |
| GCATGCAACTTTGTCATGAT+GGG | + | chr8.3:22396062-22396081 | None:intergenic | 40.0% | |
| GCCTTCAAGGTATGAATCAT+GGG | + | chr8.3:22397142-22397161 | None:intergenic | 40.0% | |
| GTAGAGGATGAAACAGCAAT+AGG | - | chr8.3:22397391-22397410 | MS.gene011698:intron | 40.0% | |
| GTTGAACCATTGTTTCGTAG+AGG | - | chr8.3:22394984-22395003 | MS.gene011698:CDS | 40.0% | |
| GTTTCAGTGGATAGATACGA+GGG | - | chr8.3:22396358-22396377 | MS.gene011698:CDS | 40.0% | |
| GTTTCTGAACTATGCAGCTA+TGG | - | chr8.3:22394904-22394923 | MS.gene011698:CDS | 40.0% | |
| TAGTATAGTACCTAGGTGGA+TGG | + | chr8.3:22395074-22395093 | None:intergenic | 40.0% | |
| TCCATGTGAAGGATCAGATA+GGG | - | chr8.3:22395591-22395610 | MS.gene011698:intron | 40.0% | |
| TCCCATGATTCATACCTTGA+AGG | - | chr8.3:22397138-22397157 | MS.gene011698:intron | 40.0% | |
| TGATTCATGCAGAAACTGCA+CGG | - | chr8.3:22395258-22395277 | MS.gene011698:intron | 40.0% | |
| TGCAATGTTGCAGGGATTAA+AGG | - | chr8.3:22397273-22397292 | MS.gene011698:CDS | 40.0% | |
| TGCATGCAACTTTGTCATGA+TGG | + | chr8.3:22396063-22396082 | None:intergenic | 40.0% | |
| TGTTACAGATTGTTCAGGTC+AGG | - | chr8.3:22397423-22397442 | MS.gene011698:intron | 40.0% | |
| TGTTTCAGTGGATAGATACG+AGG | - | chr8.3:22396357-22396376 | MS.gene011698:CDS | 40.0% | |
| TTCCATGTGAAGGATCAGAT+AGG | - | chr8.3:22395590-22395609 | MS.gene011698:intron | 40.0% | |
| TTTCAGTGGATAGATACGAG+GGG | - | chr8.3:22396359-22396378 | MS.gene011698:CDS | 40.0% | |
| ! | AATTGGTGGTTCAGTTGCTT+TGG | - | chr8.3:22397483-22397502 | MS.gene011698:CDS | 40.0% |
| ! | CATGACAGTTTTCCATGTGA+AGG | - | chr8.3:22395580-22395599 | MS.gene011698:intron | 40.0% |
| ! | GATATCTCTGAAAACAAGCC+AGG | + | chr8.3:22395989-22396008 | None:intergenic | 40.0% |
| ! | GCAATATGAGGTGTTTCATG+CGG | - | chr8.3:22396458-22396477 | MS.gene011698:CDS | 40.0% |
| !! | ATCAGTGGTACTAATGGACT+TGG | - | chr8.3:22396006-22396025 | MS.gene011698:intron | 40.0% |
| !! | TAAGGTGAGCCTTTGCTTTT+CGG | + | chr8.3:22397077-22397096 | None:intergenic | 40.0% |
| !! | TCAGTGGTACTAATGGACTT+GGG | - | chr8.3:22396007-22396026 | MS.gene011698:intron | 40.0% |
| !! | TGGTTCAACCTGAGTTTTGT+TGG | + | chr8.3:22394973-22394992 | None:intergenic | 40.0% |
| AACAGTGCAACACTGTTGCA+AGG | - | chr8.3:22395916-22395935 | MS.gene011698:intron | 45.0% | |
| ACAACAACTTAGGACGATCC+CGG | + | chr8.3:22396414-22396433 | None:intergenic | 45.0% | |
| ACACTATCCTGCGTTTGTAG+AGG | - | chr8.3:22395749-22395768 | MS.gene011698:intron | 45.0% | |
| ACAGTGCAACACTGTTGCAA+GGG | - | chr8.3:22395917-22395936 | MS.gene011698:intron | 45.0% | |
| AGCACAAAAGGCGGTATGAT+GGG | - | chr8.3:22396329-22396348 | MS.gene011698:CDS | 45.0% | |
| ATAATGGCGGTGAGCACAAA+AGG | - | chr8.3:22396317-22396336 | MS.gene011698:CDS | 45.0% | |
| ATAGAGGCCAATGAAGGAAG+GGG | - | chr8.3:22396169-22396188 | MS.gene011698:CDS | 45.0% | |
| ATCCGTTCCTATCACCTCTA+TGG | + | chr8.3:22395963-22395982 | None:intergenic | 45.0% | |
| ATGACAACTCTCGTAGTCAC+CGG | + | chr8.3:22396284-22396303 | None:intergenic | 45.0% | |
| CAAAACGGGGATACTATCGA+AGG | - | chr8.3:22397315-22397334 | MS.gene011698:intron | 45.0% | |
| CTTAGATCCTCTACAAACGC+AGG | + | chr8.3:22395759-22395778 | None:intergenic | 45.0% | |
| GAAGGGGAGAGAAAGATATG+AGG | - | chr8.3:22396185-22396204 | MS.gene011698:CDS | 45.0% | |
| GACACTTCGCACCAATAACT+TGG | + | chr8.3:22396690-22396709 | None:intergenic | 45.0% | |
| GAGACTCTACAAATGCAGCA+CGG | - | chr8.3:22395688-22395707 | MS.gene011698:intron | 45.0% | |
| GATAGAGGCCAATGAAGGAA+GGG | - | chr8.3:22396168-22396187 | MS.gene011698:CDS | 45.0% | |
| TCAGATCCGGAATGTGATAG+AGG | - | chr8.3:22396153-22396172 | MS.gene011698:CDS | 45.0% | |
| TCCCTATCTGATCCTTCACA+TGG | + | chr8.3:22395595-22395614 | None:intergenic | 45.0% | |
| TCTCGTGAATCACATTGAGC+AGG | - | chr8.3:22395634-22395653 | MS.gene011698:intron | 45.0% | |
| TGATAGAGGCCAATGAAGGA+AGG | - | chr8.3:22396167-22396186 | MS.gene011698:CDS | 45.0% | |
| TGCATGCATTATCTATCCGG+AGG | - | chr8.3:22396075-22396094 | MS.gene011698:CDS | 45.0% | |
| TGCCATAGAGGTGATAGGAA+CGG | - | chr8.3:22395958-22395977 | MS.gene011698:intron | 45.0% | |
| TTAAATATGGTTGGGAGGGG+AGG | + | chr8.3:22396770-22396789 | None:intergenic | 45.0% | |
| TTTCTCTCCCCTTCCTTCAT+TGG | + | chr8.3:22396179-22396198 | None:intergenic | 45.0% | |
| ! | AATTGTTGATGAGACGCTCG+AGG | + | chr8.3:22397609-22397628 | None:intergenic | 45.0% |
| ! | CATTGGCCTCTATCACATTC+CGG | + | chr8.3:22396162-22396181 | None:intergenic | 45.0% |
| !! | AACTTTGTCATGATGGGTCC+AGG | + | chr8.3:22396056-22396075 | None:intergenic | 45.0% |
| !! | ACATTTCTTCTGATGGCGGA+TGG | - | chr8.3:22395475-22395494 | MS.gene011698:CDS | 45.0% |
| !! | TTCTGATGGCGGATGGTTAA+TGG | - | chr8.3:22395482-22395501 | MS.gene011698:CDS | 45.0% |
| !! | TTAATATAAATTGTATTAAT+TGG | + | chr8.3:22396948-22396967 | None:intergenic | 5.0% |
| CTCTGCAGAGGAATCTGACA+GGG | - | chr8.3:22396733-22396752 | MS.gene011698:intron | 50.0% | |
| GAGCACAAAAGGCGGTATGA+TGG | - | chr8.3:22396328-22396347 | MS.gene011698:CDS | 50.0% | |
| GCACAAAAGGCGGTATGATG+GGG | - | chr8.3:22396330-22396349 | MS.gene011698:CDS | 50.0% | |
| GCGATGACTAATCTCTGCAG+AGG | - | chr8.3:22396721-22396740 | MS.gene011698:intron | 50.0% | |
| GCGTGCTCACATGCAATATG+AGG | - | chr8.3:22396446-22396465 | MS.gene011698:CDS | 50.0% | |
| GGTCTAGATCTGTCAACGTC+TGG | + | chr8.3:22395437-22395456 | None:intergenic | 50.0% | |
| GTGATAGGAACGGATCAACC+TGG | - | chr8.3:22395968-22395987 | MS.gene011698:intron | 50.0% | |
| TCTCTGCAGAGGAATCTGAC+AGG | - | chr8.3:22396732-22396751 | MS.gene011698:intron | 50.0% | |
| TGTTACCTCAAACAGCCCCA+TGG | - | chr8.3:22396482-22396501 | MS.gene011698:CDS | 50.0% | |
| TTCAGCCGGAGTTCATGCTA+TGG | - | chr8.3:22395173-22395192 | MS.gene011698:CDS | 50.0% | |
| TTCATGCAGAAACTGCACGG+TGG | - | chr8.3:22395261-22395280 | MS.gene011698:intron | 50.0% | |
| ! | TCTCTATCGTTGATTGGCCC+AGG | + | chr8.3:22396112-22396131 | None:intergenic | 50.0% |
| ! | TGGAGTACCTGTTCTGCCAT+GGG | + | chr8.3:22396501-22396520 | None:intergenic | 50.0% |
| !! | GATGGCGGATGGTTAATGGA+TGG | - | chr8.3:22395486-22395505 | MS.gene011698:intron | 50.0% |
| AAACAGCCCCATGGCAGAAC+AGG | - | chr8.3:22396491-22396510 | MS.gene011698:CDS | 55.0% | |
| AGAGTTGTCATGCCTGCCAC+GGG | - | chr8.3:22396293-22396312 | MS.gene011698:CDS | 55.0% | |
| ATGGCGGTGAGCACAAAAGG+CGG | - | chr8.3:22396320-22396339 | MS.gene011698:CDS | 55.0% | |
| CACCAGATGATGTACGCAGC+CGG | - | chr8.3:22396262-22396281 | MS.gene011698:CDS | 55.0% | |
| CAGAAACTGCACGGTGGTGA+AGG | - | chr8.3:22395267-22395286 | MS.gene011698:intron | 55.0% | |
| CCCAAGTCGTGGATCAGATC+CGG | - | chr8.3:22396140-22396159 | MS.gene011698:CDS | 55.0% | |
| CCGGATCTGATCCACGACTT+GGG | + | chr8.3:22396143-22396162 | None:intergenic | 55.0% | |
| CCGGTCACAGTCATACCGAA+CGG | - | chr8.3:22396233-22396252 | MS.gene011698:CDS | 55.0% | |
| CCGTTCGGTATGACTGTGAC+CGG | + | chr8.3:22396236-22396255 | None:intergenic | 55.0% | |
| CTCTATCGATGTGAGGCTGC+TGG | + | chr8.3:22395026-22395045 | None:intergenic | 55.0% | |
| GAGAGTTGTCATGCCTGCCA+CGG | - | chr8.3:22396292-22396311 | MS.gene011698:CDS | 55.0% | |
| GATACGAGGGGCGAGATTAC+TGG | - | chr8.3:22396371-22396390 | MS.gene011698:CDS | 55.0% | |
| GGTCGGTGAATGTGAGAAGC+CGG | - | chr8.3:22396392-22396411 | MS.gene011698:CDS | 55.0% | |
| GTCACAGTCATACCGAACGG+AGG | - | chr8.3:22396236-22396255 | MS.gene011698:CDS | 55.0% | |
| GTCGGTGAATGTGAGAAGCC+GGG | - | chr8.3:22396393-22396412 | MS.gene011698:CDS | 55.0% | |
| TCCGGATCTGATCCACGACT+TGG | + | chr8.3:22396144-22396163 | None:intergenic | 55.0% | |
| TGATGGGGCCCATGTTTCAG+TGG | - | chr8.3:22396345-22396364 | MS.gene011698:CDS | 55.0% | |
| TTCGGTATGACTGTGACCGG+TGG | + | chr8.3:22396233-22396252 | None:intergenic | 55.0% | |
| TTCTGCCATGGGGCTGTTTG+AGG | + | chr8.3:22396490-22396509 | None:intergenic | 55.0% | |
| ! | AGAGCGATTAGCCCAAGTCG+TGG | - | chr8.3:22396129-22396148 | MS.gene011698:CDS | 55.0% |
| ! | ATCGTTGATTGGCCCAGGTC+TGG | + | chr8.3:22396107-22396126 | None:intergenic | 55.0% |
| ! | CTGGAGTACCTGTTCTGCCA+TGG | + | chr8.3:22396502-22396521 | None:intergenic | 55.0% |
| ! | GGAGTACCTGTTCTGCCATG+GGG | + | chr8.3:22396500-22396519 | None:intergenic | 55.0% |
| CATCTGGTGGAGCCTCCGTT+CGG | + | chr8.3:22396251-22396270 | None:intergenic | 60.0% | |
| CATGCCTGCCACGGGGATAA+TGG | - | chr8.3:22396301-22396320 | MS.gene011698:CDS | 60.0% | |
| CCAGGTCTGGATGCATCCTC+CGG | + | chr8.3:22396094-22396113 | None:intergenic | 60.0% | |
| CGAGGGGCGAGATTACTGGT+CGG | - | chr8.3:22396375-22396394 | MS.gene011698:CDS | 60.0% | |
| CGGAGGATGCATCCAGACCT+GGG | - | chr8.3:22396092-22396111 | MS.gene011698:CDS | 60.0% | |
| CGGCTGCGTACATCATCTGG+TGG | + | chr8.3:22396264-22396283 | None:intergenic | 60.0% | |
| GAGTTGTCATGCCTGCCACG+GGG | - | chr8.3:22396294-22396313 | MS.gene011698:CDS | 60.0% | |
| GGTATGACTGTGACCGGTGG+TGG | + | chr8.3:22396230-22396249 | None:intergenic | 60.0% | |
| GGTTGGGAGGGGAGGACTAA+AGG | + | chr8.3:22396762-22396781 | None:intergenic | 60.0% | |
| ! | CACCGGCTGCGTACATCATC+TGG | + | chr8.3:22396267-22396286 | None:intergenic | 60.0% |
| ACCGCCATTATCCCCGTGGC+AGG | + | chr8.3:22396308-22396327 | None:intergenic | 65.0% | |
| CCGGAGGATGCATCCAGACC+TGG | - | chr8.3:22396091-22396110 | MS.gene011698:CDS | 65.0% | |
| GCTCACCGCCATTATCCCCG+TGG | + | chr8.3:22396312-22396331 | None:intergenic | 65.0% | |
| ! | GCCTGCCACGGGGATAATGG+CGG | - | chr8.3:22396304-22396323 | MS.gene011698:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 22394889 | 22397648 | 22394889 | ID=MS.gene011698 |
| chr8.3 | mRNA | 22394889 | 22397648 | 22394889 | ID=MS.gene011698.t1;Parent=MS.gene011698 |
| chr8.3 | exon | 22397455 | 22397648 | 22397455 | ID=MS.gene011698.t1.exon1;Parent=MS.gene011698.t1 |
| chr8.3 | CDS | 22397455 | 22397648 | 22397455 | ID=cds.MS.gene011698.t1;Parent=MS.gene011698.t1 |
| chr8.3 | exon | 22397249 | 22397294 | 22397249 | ID=MS.gene011698.t1.exon2;Parent=MS.gene011698.t1 |
| chr8.3 | CDS | 22397249 | 22397294 | 22397249 | ID=cds.MS.gene011698.t1;Parent=MS.gene011698.t1 |
| chr8.3 | exon | 22397030 | 22397144 | 22397030 | ID=MS.gene011698.t1.exon3;Parent=MS.gene011698.t1 |
| chr8.3 | CDS | 22397030 | 22397144 | 22397030 | ID=cds.MS.gene011698.t1;Parent=MS.gene011698.t1 |
| chr8.3 | exon | 22396882 | 22396949 | 22396882 | ID=MS.gene011698.t1.exon4;Parent=MS.gene011698.t1 |
| chr8.3 | CDS | 22396882 | 22396949 | 22396882 | ID=cds.MS.gene011698.t1;Parent=MS.gene011698.t1 |
| chr8.3 | exon | 22396025 | 22396668 | 22396025 | ID=MS.gene011698.t1.exon5;Parent=MS.gene011698.t1 |
| chr8.3 | CDS | 22396025 | 22396668 | 22396025 | ID=cds.MS.gene011698.t1;Parent=MS.gene011698.t1 |
| chr8.3 | exon | 22395405 | 22395501 | 22395405 | ID=MS.gene011698.t1.exon6;Parent=MS.gene011698.t1 |
| chr8.3 | CDS | 22395405 | 22395501 | 22395405 | ID=cds.MS.gene011698.t1;Parent=MS.gene011698.t1 |
| chr8.3 | exon | 22394889 | 22395251 | 22394889 | ID=MS.gene011698.t1.exon7;Parent=MS.gene011698.t1 |
| chr8.3 | CDS | 22394889 | 22395251 | 22394889 | ID=cds.MS.gene011698.t1;Parent=MS.gene011698.t1 |
| Gene Sequence |
| Protein sequence |
