Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06206.t1 | RHN43535.1 | 99.7 | 316 | 1 | 0 | 1 | 316 | 1 | 316 | 2.30E-172 | 614.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06206.t1 | O48726 | 69.2 | 299 | 90 | 2 | 4 | 301 | 2 | 299 | 1.9e-111 | 403.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06206.t1 | G7LIU7 | 99.7 | 316 | 1 | 0 | 1 | 316 | 1 | 316 | 1.7e-172 | 614.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050277 | MS.gene06206 | 0.80267 | 5.02E-49 | -1.69E-46 |
| MS.gene05134 | MS.gene06206 | 0.812963 | 3.25E-51 | -1.69E-46 |
| MS.gene057140 | MS.gene06206 | 0.80624 | 9.05E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene06206 | MS.gene058594 | PPI |
| MS.gene06206 | MS.gene57118 | PPI |
| MS.gene06206 | MS.gene62646 | PPI |
| MS.gene06206 | MS.gene015610 | PPI |
| MS.gene06206 | MS.gene74847 | PPI |
| MS.gene06206 | MS.gene95863 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06206.t1 | MTR_8g101230 | 99.684 | 316 | 1 | 0 | 1 | 316 | 1 | 316 | 0.0 | 632 |
| MS.gene06206.t1 | MTR_8g101230 | 97.785 | 316 | 1 | 1 | 1 | 316 | 1 | 310 | 0.0 | 612 |
| MS.gene06206.t1 | MTR_8g101230 | 99.636 | 275 | 1 | 0 | 1 | 275 | 1 | 275 | 0.0 | 551 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06206.t1 | AT2G26590 | 67.732 | 313 | 86 | 3 | 4 | 315 | 2 | 300 | 5.56e-147 | 416 |
| MS.gene06206.t1 | AT2G26590 | 67.732 | 313 | 86 | 3 | 4 | 315 | 2 | 300 | 5.56e-147 | 416 |
| MS.gene06206.t1 | AT2G26590 | 67.732 | 313 | 86 | 3 | 4 | 315 | 2 | 300 | 5.56e-147 | 416 |
| MS.gene06206.t1 | AT2G26590 | 66.134 | 313 | 87 | 4 | 4 | 315 | 2 | 296 | 1.02e-140 | 399 |
Find 70 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATGTCACTAGAGGGAAAA+AGG | 0.228102 | 4.2:+3655230 | MS.gene06206:CDS |
| ATCTTCTGGTCCAGTTAAAT+TGG | 0.244685 | 4.2:+3659074 | MS.gene06206:CDS |
| TAACATTACCTCTGGTAAAT+AGG | 0.276133 | 4.2:-3659625 | None:intergenic |
| CAGATAGATTTGTCCCAGTT+TGG | 0.317934 | 4.2:+3659891 | MS.gene06206:CDS |
| ATGACAGAAAGTTCTTCTTC+TGG | 0.336325 | 4.2:+3657367 | MS.gene06206:CDS |
| TACTTGGATCAATTCCAAAC+TGG | 0.345350 | 4.2:-3659905 | None:intergenic |
| TGGAGATCTGCCAATTTAAC+TGG | 0.349597 | 4.2:-3659084 | None:intergenic |
| ACTAGCGATGTAACATCTTC+TGG | 0.352930 | 4.2:+3659060 | MS.gene06206:CDS |
| GAGATTATTACCTGGATTGC+AGG | 0.356564 | 4.2:-3654964 | None:intergenic |
| GGCTACTTGGATTCATCCAT+TGG | 0.381548 | 4.2:-3660468 | None:intergenic |
| TGATCTGATATTGCCATTGA+TGG | 0.395309 | 4.2:+3659572 | MS.gene06206:CDS |
| ACTAGAAACTTACATTTACT+TGG | 0.408411 | 4.2:-3659921 | None:intergenic |
| GATTAGGTTAATCAAACATC+TGG | 0.417400 | 4.2:+3657315 | MS.gene06206:intron |
| GATTACCTCAACAGACCATT+AGG | 0.418595 | 4.2:+3657542 | MS.gene06206:CDS |
| ACGAGTCCTTTGCGTGCATC+AGG | 0.422741 | 4.2:-3655259 | None:intergenic |
| GGAATCTAGGCAAGATGATC+AGG | 0.427826 | 4.2:+3660422 | MS.gene06206:CDS |
| TCTCCAAGTCTGAGGAATCT+AGG | 0.438245 | 4.2:+3660409 | MS.gene06206:CDS |
| AAGTAGCCTGCCAGGCTACT+TGG | 0.438982 | 4.2:-3660481 | None:intergenic |
| GTTGCATCCACACCAAAGTT+CGG | 0.439990 | 4.2:-3659039 | None:intergenic |
| CAATGTTGCTCAATATTCTC+TGG | 0.443937 | 4.2:-3659104 | None:intergenic |
| TTGCATCCACACCAAAGTTC+GGG | 0.455855 | 4.2:-3659038 | None:intergenic |
| TCGCTGCAGGTACTTCGAAC+AGG | 0.457627 | 4.2:+3659867 | MS.gene06206:intron |
| GCTACTTGGATTCATCCATT+GGG | 0.458064 | 4.2:-3660467 | None:intergenic |
| AAAGTTCTTCTTCTGGATGC+AGG | 0.461672 | 4.2:+3657374 | MS.gene06206:CDS |
| GCCAAGTGATTACCTTCGTC+AGG | 0.468536 | 4.2:-3659239 | None:intergenic |
| ATCAATGGCAATATCAGATC+AGG | 0.469632 | 4.2:-3659570 | None:intergenic |
| AAGGACTCGTTCGCATTGCT+AGG | 0.470556 | 4.2:+3655272 | MS.gene06206:CDS |
| CTGTTGACAGGAAACTCTCC+TGG | 0.487004 | 4.2:+3655192 | MS.gene06206:intron |
| TTGGTCTCCAGAAGATATAT+TGG | 0.495383 | 4.2:+3659720 | MS.gene06206:CDS |
| AACAACTCCAATATATCTTC+TGG | 0.501293 | 4.2:-3659727 | None:intergenic |
| AATGGTAACGTCTCCATCAA+TGG | 0.501612 | 4.2:-3659585 | None:intergenic |
| ATTCTATGATGTAGGGTACT+TGG | 0.504079 | 4.2:+3659701 | MS.gene06206:intron |
| TTGCCTAGATTCCTCAGACT+TGG | 0.504515 | 4.2:-3660412 | None:intergenic |
| GCTTGAAGTTTCTGAAGATA+CGG | 0.509208 | 4.2:+3658803 | MS.gene06206:CDS |
| GTTGGAAAGAGCTGCAAACT+TGG | 0.509813 | 4.2:+3659011 | MS.gene06206:intron |
| AACTTGGTTGTCCCGAACTT+TGG | 0.511711 | 4.2:+3659027 | MS.gene06206:CDS |
| TTCTCACTAACAGAGCTCCT+TGG | 0.514456 | 4.2:+3658753 | MS.gene06206:intron |
| CAGAGAATATTGAGCAACAT+TGG | 0.515670 | 4.2:+3659105 | MS.gene06206:CDS |
| AGCAACATTGGACCTGCTGC+AGG | 0.516938 | 4.2:+3659117 | MS.gene06206:CDS |
| ATTGATGGAGACGTTACCAT+TGG | 0.528804 | 4.2:+3659587 | MS.gene06206:CDS |
| ACTTGGATCAATTCCAAACT+GGG | 0.539991 | 4.2:-3659904 | None:intergenic |
| GAAGCTAGACGCTGCTCCAA+TGG | 0.546492 | 4.2:-3659603 | None:intergenic |
| ATCTCAATCTTGTACCCCAA+TGG | 0.549644 | 4.2:+3660452 | MS.gene06206:CDS |
| GGTTAATCAAACATCTGGAA+GGG | 0.549885 | 4.2:+3657320 | MS.gene06206:intron |
| TTCAGAAACTTCAAGCGGAA+GGG | 0.552715 | 4.2:-3658796 | None:intergenic |
| TCTACTTGCTGACGGAAAGG+TGG | 0.554317 | 4.2:-3659757 | None:intergenic |
| GATTGCAGGAAAAGCGTCGA+TGG | 0.560072 | 4.2:-3654950 | None:intergenic |
| TGTAACTTATTACCTGCAGC+AGG | 0.562977 | 4.2:-3659129 | None:intergenic |
| CTACTTGCTGACGGAAAGGT+GGG | 0.563809 | 4.2:-3659756 | None:intergenic |
| GAATCTACTTGCTGACGGAA+AGG | 0.566905 | 4.2:-3659760 | None:intergenic |
| CTTCAGAAACTTCAAGCGGA+AGG | 0.572912 | 4.2:-3658797 | None:intergenic |
| TCAAGCGGAAGGGATACATC+AGG | 0.576564 | 4.2:-3658786 | None:intergenic |
| ACTCTCCTGGAGTTTCGTGC+TGG | 0.579564 | 4.2:+3655205 | MS.gene06206:CDS |
| TAAAAGAATCTACTTGCTGA+CGG | 0.580735 | 4.2:-3659765 | None:intergenic |
| AGGTTAATCAAACATCTGGA+AGG | 0.590396 | 4.2:+3657319 | MS.gene06206:intron |
| TGCTGGTAAAATGTCACTAG+AGG | 0.593216 | 4.2:+3655222 | MS.gene06206:CDS |
| ATTTAATTAGGCTTTGAACT+CGG | 0.598507 | 4.2:+3659534 | MS.gene06206:intron |
| AGGACTCGTTCGCATTGCTA+GGG | 0.600668 | 4.2:+3655273 | MS.gene06206:CDS |
| GCTGGTAAAATGTCACTAGA+GGG | 0.629870 | 4.2:+3655223 | MS.gene06206:CDS |
| GTAGTTCCTGATGCACGCAA+AGG | 0.629923 | 4.2:+3655253 | MS.gene06206:CDS |
| GGTTGTCCCGAACTTTGGTG+TGG | 0.640547 | 4.2:+3659032 | MS.gene06206:CDS |
| TTGAAGATGACATCTCATCC+AGG | 0.641031 | 4.2:+3658826 | MS.gene06206:CDS |
| TCTAGCTTCCTATTTACCAG+AGG | 0.641283 | 4.2:+3659617 | MS.gene06206:CDS |
| GGATTCTGTCTCCAAGTCTG+AGG | 0.641302 | 4.2:+3660401 | MS.gene06206:CDS |
| CTACTTGGATTCATCCATTG+GGG | 0.648704 | 4.2:-3660466 | None:intergenic |
| ACTTACCTAATGGTCTGTTG+AGG | 0.651428 | 4.2:-3657547 | None:intergenic |
| AGCATTCTTGATCCTGACGA+AGG | 0.660593 | 4.2:+3659227 | MS.gene06206:CDS |
| CATCAGGTTCTTCTTCACCA+AGG | 0.686746 | 4.2:-3658770 | None:intergenic |
| GTATCTTCAGAAACTTCAAG+CGG | 0.690380 | 4.2:-3658801 | None:intergenic |
| TCAGATAATATTTCCGAACG+AGG | 0.696593 | 4.2:+3657200 | MS.gene06206:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAAACAAAAAATGA+AGG | + | chr4.2:3660249-3660268 | MS.gene06206:intron | 10.0% |
| !! | ATTAGTAAATGAAATTTATA+GGG | + | chr4.2:3655973-3655992 | MS.gene06206:intron | 10.0% |
| !! | TATTAGTAAATGAAATTTAT+AGG | + | chr4.2:3655972-3655991 | MS.gene06206:intron | 10.0% |
| !! | TATTTACAAGATTATAAATA+AGG | + | chr4.2:3657745-3657764 | MS.gene06206:intron | 10.0% |
| !! | TTATAAAAAATATTAGCAAA+AGG | + | chr4.2:3659481-3659500 | MS.gene06206:intron | 10.0% |
| !! | AACAGCAATTATATATATTT+GGG | - | chr4.2:3655534-3655553 | None:intergenic | 15.0% |
| !! | ATCAAAATCAATAACAATTA+AGG | - | chr4.2:3659969-3659988 | None:intergenic | 15.0% |
| !! | ATGAAATGTAAAAAAGAAAA+AGG | - | chr4.2:3659815-3659834 | None:intergenic | 15.0% |
| !! | ATTTCATTTCAAAAGATATT+CGG | + | chr4.2:3659828-3659847 | MS.gene06206:intron | 15.0% |
| !! | CTAAAAAAAAAAAATTGACA+TGG | - | chr4.2:3657921-3657940 | None:intergenic | 15.0% |
| !! | TGAAATGTAAAAAAGAAAAA+GGG | - | chr4.2:3659814-3659833 | None:intergenic | 15.0% |
| !! | TTAGTAAATGAAATTTATAG+GGG | + | chr4.2:3655974-3655993 | MS.gene06206:intron | 15.0% |
| !!! | ATTTGAGACAAAAAATTAAT+CGG | - | chr4.2:3655675-3655694 | None:intergenic | 15.0% |
| !!! | CATGTCAATTTTTTTTTTTT+AGG | + | chr4.2:3657919-3657938 | MS.gene06206:intron | 15.0% |
| !!! | TTGTACATAATTTATTTTCA+TGG | + | chr4.2:3658290-3658309 | MS.gene06206:intron | 15.0% |
| !! | AAAATCAATAACAATTAAGG+TGG | - | chr4.2:3659966-3659985 | None:intergenic | 20.0% |
| !! | AGATCTAAAGATTTATAAGT+TGG | + | chr4.2:3656933-3656952 | MS.gene06206:intron | 20.0% |
| !! | ATGAATCAAAACCAAATAAA+AGG | - | chr4.2:3658626-3658645 | None:intergenic | 20.0% |
| !! | CATATCATCAAAAAAGTAAT+AGG | - | chr4.2:3659202-3659221 | None:intergenic | 20.0% |
| !! | CTATGAAAAATAAACACTAA+AGG | - | chr4.2:3656008-3656027 | None:intergenic | 20.0% |
| !! | CTTATTTATAAAGATAACGT+GGG | + | chr4.2:3656112-3656131 | MS.gene06206:intron | 20.0% |
| !! | GAACAGCAATTATATATATT+TGG | - | chr4.2:3655535-3655554 | None:intergenic | 20.0% |
| !! | TATATATTTGGGAAGAAAAA+AGG | - | chr4.2:3655523-3655542 | None:intergenic | 20.0% |
| !! | TTCGTTAAAAAATGCATATT+AGG | + | chr4.2:3658527-3658546 | MS.gene06206:intron | 20.0% |
| !!! | AAAGTATTTCCATTTGATTA+TGG | + | chr4.2:3658412-3658431 | MS.gene06206:intron | 20.0% |
| !!! | AGATTCTTTTACTTATGTAA+AGG | + | chr4.2:3659777-3659796 | MS.gene06206:intron | 20.0% |
| !!! | ATTTATTCACATTTTCCATT+TGG | + | chr4.2:3660068-3660087 | MS.gene06206:intron | 20.0% |
| !!! | CTAAAAGTTTGTTTTTTTGT+TGG | + | chr4.2:3658993-3659012 | MS.gene06206:intron | 20.0% |
| !!! | TTATAAGTTGGATAGAAATA+TGG | + | chr4.2:3656945-3656964 | MS.gene06206:intron | 20.0% |
| !!! | TTTGGATATTCAAATGTTTT+CGG | + | chr4.2:3658856-3658875 | MS.gene06206:intron | 20.0% |
| !!! | TTTTTTATGCTATGATTGAT+CGG | + | chr4.2:3655159-3655178 | MS.gene06206:intron | 20.0% |
| ! | AACTTAGTACAACTTAGTAT+TGG | + | chr4.2:3658002-3658021 | MS.gene06206:intron | 25.0% |
| ! | AAGATAAAGAGATTATTACC+TGG | - | chr4.2:3654975-3654994 | None:intergenic | 25.0% |
| ! | AATGTAAAAAAGAAAAAGGG+AGG | - | chr4.2:3659811-3659830 | None:intergenic | 25.0% |
| ! | ACCAAAGAAAACTACTATAT+GGG | - | chr4.2:3655713-3655732 | None:intergenic | 25.0% |
| ! | ACTAGAAACTTACATTTACT+TGG | - | chr4.2:3659924-3659943 | None:intergenic | 25.0% |
| ! | ACTTAGTACAACTTAGTATT+GGG | + | chr4.2:3658003-3658022 | MS.gene06206:intron | 25.0% |
| ! | AGCATCAAAATAAATACAGA+AGG | - | chr4.2:3657157-3657176 | None:intergenic | 25.0% |
| ! | AGCTTAATAGCTAACAAATA+TGG | + | chr4.2:3656331-3656350 | MS.gene06206:intron | 25.0% |
| ! | AGGATTATAAATGACAACAT+TGG | + | chr4.2:3656826-3656845 | MS.gene06206:intron | 25.0% |
| ! | ATCATCAAGTCAAAATACTT+AGG | - | chr4.2:3657431-3657450 | None:intergenic | 25.0% |
| ! | ATGGAAAATGTGAATAAATG+TGG | - | chr4.2:3660067-3660086 | None:intergenic | 25.0% |
| ! | ATGTAAAAAAGAAAAAGGGA+GGG | - | chr4.2:3659810-3659829 | None:intergenic | 25.0% |
| ! | ATGTAGTATTCTATGATGTA+GGG | + | chr4.2:3659694-3659713 | MS.gene06206:intron | 25.0% |
| ! | CCACGTTATCTTTATAAATA+AGG | - | chr4.2:3656114-3656133 | None:intergenic | 25.0% |
| ! | CGTAACCATACTAATATATT+TGG | - | chr4.2:3658559-3658578 | None:intergenic | 25.0% |
| ! | GAAAGCCAAATATATTAGTA+TGG | + | chr4.2:3658551-3658570 | MS.gene06206:intron | 25.0% |
| ! | GGAACAACTAATATTTCAAT+TGG | - | chr4.2:3657136-3657155 | None:intergenic | 25.0% |
| ! | TAGAATTTGTATAGAATAGC+TGG | + | chr4.2:3655648-3655667 | MS.gene06206:intron | 25.0% |
| ! | TAGATTCCTATACACAATAA+AGG | - | chr4.2:3657484-3657503 | None:intergenic | 25.0% |
| ! | TATCTATTTATTTACCTGAC+TGG | + | chr4.2:3658967-3658986 | MS.gene06206:intron | 25.0% |
| ! | TCATCAAGTCAAAATACTTA+GGG | - | chr4.2:3657430-3657449 | None:intergenic | 25.0% |
| ! | TGCTTTACTCTTAATATCTT+GGG | + | chr4.2:3657244-3657263 | MS.gene06206:intron | 25.0% |
| ! | TGGAAAATGTGAATAAATGT+GGG | - | chr4.2:3660066-3660085 | None:intergenic | 25.0% |
| ! | TTAATTAATGCAAAGAAGCT+AGG | + | chr4.2:3657893-3657912 | MS.gene06206:intron | 25.0% |
| ! | TTACACGGTTTAAATATCTT+GGG | + | chr4.2:3656545-3656564 | MS.gene06206:intron | 25.0% |
| ! | TTATCATTGTGACATACTAA+AGG | - | chr4.2:3656202-3656221 | None:intergenic | 25.0% |
| ! | TTCAACAATGCAAATTCAAA+GGG | - | chr4.2:3655356-3655375 | None:intergenic | 25.0% |
| !! | ATAATTGCTGTTCATTTGAA+TGG | + | chr4.2:3655542-3655561 | MS.gene06206:intron | 25.0% |
| !! | CAGTTTTCTTGCATTTAATT+AGG | + | chr4.2:3659522-3659541 | MS.gene06206:intron | 25.0% |
| !! | CCTTATTTATAAAGATAACG+TGG | + | chr4.2:3656111-3656130 | MS.gene06206:intron | 25.0% |
| !!! | ATTTAATTAGGCTTTGAACT+CGG | + | chr4.2:3659534-3659553 | MS.gene06206:intron | 25.0% |
| !!! | CGCTTAATTTATTTTCTTGT+TGG | - | chr4.2:3656756-3656775 | None:intergenic | 25.0% |
| !!! | TAAAAAGTGTTGTCAAATAG+TGG | + | chr4.2:3658180-3658199 | MS.gene06206:intron | 25.0% |
| !!! | TACTGAAACAATAGCTTTAT+AGG | - | chr4.2:3656246-3656265 | None:intergenic | 25.0% |
| !!! | TATTTTCTGAGAATTACTAC+TGG | + | chr4.2:3660289-3660308 | MS.gene06206:intron | 25.0% |
| !!! | TCTTGGGTATGATTATTTTA+TGG | + | chr4.2:3657260-3657279 | MS.gene06206:intron | 25.0% |
| !!! | TGCATTTTTTAACGAAATCT+AGG | - | chr4.2:3658523-3658542 | None:intergenic | 25.0% |
| AAAATGTGAATAAATGTGGG+AGG | - | chr4.2:3660063-3660082 | None:intergenic | 30.0% | |
| AACAACTCCAATATATCTTC+TGG | - | chr4.2:3659730-3659749 | None:intergenic | 30.0% | |
| AAGTCAAAATAATAGAGGTC+TGG | - | chr4.2:3657075-3657094 | None:intergenic | 30.0% | |
| AATATTATCTGATCCTGTGT+TGG | - | chr4.2:3657192-3657211 | None:intergenic | 30.0% | |
| AATGAAGGAAAAAAGATACG+AGG | + | chr4.2:3660264-3660283 | MS.gene06206:intron | 30.0% | |
| ACAAGCAATGTTGTCAATAA+CGG | - | chr4.2:3658274-3658293 | None:intergenic | 30.0% | |
| ACAGTCTTAATAGATAGCAA+GGG | - | chr4.2:3659277-3659296 | None:intergenic | 30.0% | |
| ACCTATAGTAGAAAAGATTG+TGG | + | chr4.2:3656865-3656884 | MS.gene06206:intron | 30.0% | |
| AGATATTAAGAGTAAAGCAG+TGG | - | chr4.2:3657243-3657262 | None:intergenic | 30.0% | |
| AGATCTCAACACAGTTAAAA+GGG | - | chr4.2:3659177-3659196 | None:intergenic | 30.0% | |
| AGCACTTTAATGACAGAAAA+TGG | - | chr4.2:3658443-3658462 | None:intergenic | 30.0% | |
| AGCTTACAATTCAAAGCAAA+AGG | - | chr4.2:3657579-3657598 | None:intergenic | 30.0% | |
| ATCTTACTCTTACACATATG+TGG | + | chr4.2:3658487-3658506 | MS.gene06206:intron | 30.0% | |
| CAATTCTGCTTACTTAAGAA+TGG | + | chr4.2:3657643-3657662 | MS.gene06206:intron | 30.0% | |
| CACTTTAATGACAGAAAATG+GGG | - | chr4.2:3658441-3658460 | None:intergenic | 30.0% | |
| CATGTAGTATTCTATGATGT+AGG | + | chr4.2:3659693-3659712 | MS.gene06206:intron | 30.0% | |
| CTAAGTTGTACTAAGTTGTT+TGG | - | chr4.2:3657999-3658018 | None:intergenic | 30.0% | |
| CTACATGAATCACTAAACAA+AGG | - | chr4.2:3659680-3659699 | None:intergenic | 30.0% | |
| CTATATGGGTCAAATAGAAT+TGG | + | chr4.2:3655901-3655920 | MS.gene06206:intron | 30.0% | |
| CTGCTTTACTCTTAATATCT+TGG | + | chr4.2:3657243-3657262 | MS.gene06206:intron | 30.0% | |
| CTTCAACAATGCAAATTCAA+AGG | - | chr4.2:3655357-3655376 | None:intergenic | 30.0% | |
| GACCAAAGAAAACTACTATA+TGG | - | chr4.2:3655714-3655733 | None:intergenic | 30.0% | |
| GATTAGGTTAATCAAACATC+TGG | + | chr4.2:3657315-3657334 | MS.gene06206:intron | 30.0% | |
| GATTATATATTTATCGCTGC+AGG | + | chr4.2:3659854-3659873 | MS.gene06206:intron | 30.0% | |
| GCACTTTAATGACAGAAAAT+GGG | - | chr4.2:3658442-3658461 | None:intergenic | 30.0% | |
| GTATTTCCATTTGATTATGG+TGG | + | chr4.2:3658415-3658434 | MS.gene06206:intron | 30.0% | |
| GTGGTAAAATTAGACAAGAT+AGG | + | chr4.2:3656806-3656825 | MS.gene06206:intron | 30.0% | |
| GTTACACGGTTTAAATATCT+TGG | + | chr4.2:3656544-3656563 | MS.gene06206:intron | 30.0% | |
| TAAACCAAGTTAACCTTTGT+AGG | + | chr4.2:3656444-3656463 | MS.gene06206:intron | 30.0% | |
| TAAACCATGGAATTTAAGCT+GGG | + | chr4.2:3656610-3656629 | MS.gene06206:intron | 30.0% | |
| TAACATTACCTCTGGTAAAT+AGG | - | chr4.2:3659628-3659647 | None:intergenic | 30.0% | |
| TAGAAAAGATTGTGGAAACT+AGG | + | chr4.2:3656873-3656892 | MS.gene06206:intron | 30.0% | |
| TAGGCAAATAGCTAAATGTA+TGG | + | chr4.2:3658675-3658694 | MS.gene06206:intron | 30.0% | |
| TATCTATTAAGACTGTGTGA+TGG | + | chr4.2:3659281-3659300 | MS.gene06206:intron | 30.0% | |
| TATTTAAACCGTGTAACTTG+TGG | - | chr4.2:3656541-3656560 | None:intergenic | 30.0% | |
| TGCACATTGTTGTCAAATAA+CGG | + | chr4.2:3658103-3658122 | MS.gene06206:intron | 30.0% | |
| TGGTATTTGATAGAACACTA+TGG | + | chr4.2:3656965-3656984 | MS.gene06206:intron | 30.0% | |
| TGTGTAAGAGTAAGATCATA+TGG | - | chr4.2:3658483-3658502 | None:intergenic | 30.0% | |
| TGTGTGTCTATTATGGATAT+TGG | + | chr4.2:3656082-3656101 | MS.gene06206:intron | 30.0% | |
| TGTTTCAGTATATTACTTGC+AGG | + | chr4.2:3656256-3656275 | MS.gene06206:intron | 30.0% | |
| TTCAAAGTTTCATGTCTTGT+AGG | + | chr4.2:3660184-3660203 | MS.gene06206:intron | 30.0% | |
| TTGCCAAGTCAAAATAATAG+AGG | - | chr4.2:3657080-3657099 | None:intergenic | 30.0% | |
| TTGCTAATGAGTACAATACT+TGG | + | chr4.2:3660156-3660175 | MS.gene06206:intron | 30.0% | |
| ! | ACAAATTTGCTTTCTAGTAC+TGG | + | chr4.2:3660114-3660133 | MS.gene06206:intron | 30.0% |
| ! | CACATTTTCCATTTGGTATA+CGG | + | chr4.2:3660075-3660094 | MS.gene06206:intron | 30.0% |
| ! | TAAAAGAATCTACTTGCTGA+CGG | - | chr4.2:3659768-3659787 | None:intergenic | 30.0% |
| ! | TCCACAATCTTTTCTACTAT+AGG | - | chr4.2:3656869-3656888 | None:intergenic | 30.0% |
| ! | TCCCATATAGTAGTTTTCTT+TGG | + | chr4.2:3655709-3655728 | MS.gene06206:intron | 30.0% |
| ! | TCTACTATGGTGTTTCTAAT+GGG | + | chr4.2:3655787-3655806 | MS.gene06206:intron | 30.0% |
| ! | TTCAAGTCAAATTTTAAGCC+AGG | + | chr4.2:3655104-3655123 | MS.gene06206:intron | 30.0% |
| !! | AGAACTTGATTTGCAAAAAC+AGG | + | chr4.2:3655621-3655640 | MS.gene06206:intron | 30.0% |
| !! | ATGACAGAAAATTTTGATGC+TGG | + | chr4.2:3658597-3658616 | MS.gene06206:intron | 30.0% |
| !! | TGGCTTAAAATTTGACTTGA+AGG | - | chr4.2:3655105-3655124 | None:intergenic | 30.0% |
| !!! | AGACCTCTATTATTTTGACT+TGG | + | chr4.2:3657074-3657093 | MS.gene06206:intron | 30.0% |
| !!! | ATGGTTTTGAACAACCATTT+AGG | + | chr4.2:3658072-3658091 | MS.gene06206:intron | 30.0% |
| !!! | TTGTCTTTTCTAGAACAAAC+TGG | - | chr4.2:3656138-3656157 | None:intergenic | 30.0% |
| AAAACTGTATCCCATGATGA+GGG | + | chr4.2:3659415-3659434 | MS.gene06206:intron | 35.0% | |
| AAAATACTTAGGGAGACAAG+TGG | - | chr4.2:3657420-3657439 | None:intergenic | 35.0% | |
| AAATGTCACTAGAGGGAAAA+AGG | + | chr4.2:3655230-3655249 | MS.gene06206:CDS | 35.0% | |
| AAGGAGAGATACTTACCTAA+TGG | - | chr4.2:3657560-3657579 | None:intergenic | 35.0% | |
| AATGTCACTAGAGGGAAAAA+GGG | + | chr4.2:3655231-3655250 | MS.gene06206:CDS | 35.0% | |
| ACTGTCTCGTACAACATTAT+CGG | - | chr4.2:3656715-3656734 | None:intergenic | 35.0% | |
| ACTTGGATCAATTCCAAACT+GGG | - | chr4.2:3659907-3659926 | None:intergenic | 35.0% | |
| AGAGAGAGAGAGAGTTAATA+AGG | - | chr4.2:3656045-3656064 | None:intergenic | 35.0% | |
| AGATATGCAATGCACTAGTA+AGG | - | chr4.2:3658952-3658971 | None:intergenic | 35.0% | |
| AGCTGCTATGACATAAAAGA+TGG | - | chr4.2:3655850-3655869 | None:intergenic | 35.0% | |
| AGGCTTACACGTTAATAGAA+AGG | - | chr4.2:3657603-3657622 | None:intergenic | 35.0% | |
| AGGTTAATCAAACATCTGGA+AGG | + | chr4.2:3657319-3657338 | MS.gene06206:intron | 35.0% | |
| ATAGAAGGAGATGTAAACCA+TGG | + | chr4.2:3656597-3656616 | MS.gene06206:intron | 35.0% | |
| ATAGAGTGAGTGTGTTTCAA+AGG | - | chr4.2:3655885-3655904 | None:intergenic | 35.0% | |
| ATATTCTGACCTCTGATTCT+TGG | + | chr4.2:3657289-3657308 | MS.gene06206:intron | 35.0% | |
| ATCAATGGCAATATCAGATC+AGG | - | chr4.2:3659573-3659592 | None:intergenic | 35.0% | |
| ATCTTCTGGTCCAGTTAAAT+TGG | + | chr4.2:3659074-3659093 | MS.gene06206:CDS | 35.0% | |
| ATGACAGAAAGTTCTTCTTC+TGG | + | chr4.2:3657367-3657386 | MS.gene06206:CDS | 35.0% | |
| ATGGTTGTTCAAAACCATAC+AGG | - | chr4.2:3658070-3658089 | None:intergenic | 35.0% | |
| ATTAGTATGGTTACGTACAC+AGG | + | chr4.2:3658564-3658583 | MS.gene06206:intron | 35.0% | |
| CAAAGATGAAGATGTTGAGT+TGG | + | chr4.2:3656779-3656798 | MS.gene06206:intron | 35.0% | |
| CAATGTTGCTCAATATTCTC+TGG | - | chr4.2:3659107-3659126 | None:intergenic | 35.0% | |
| CACAGTCTTAATAGATAGCA+AGG | - | chr4.2:3659278-3659297 | None:intergenic | 35.0% | |
| CAGAGAATATTGAGCAACAT+TGG | + | chr4.2:3659105-3659124 | MS.gene06206:CDS | 35.0% | |
| CAGATCTCAACACAGTTAAA+AGG | - | chr4.2:3659178-3659197 | None:intergenic | 35.0% | |
| CATTCCATAGTGCTAAACAA+CGG | + | chr4.2:3656570-3656589 | MS.gene06206:intron | 35.0% | |
| CATTGGTATAACATTACCTC+TGG | - | chr4.2:3659636-3659655 | None:intergenic | 35.0% | |
| CCTATACACAATAAAGGTTC+AGG | - | chr4.2:3657478-3657497 | None:intergenic | 35.0% | |
| CCTGAACCTTTATTGTGTAT+AGG | + | chr4.2:3657475-3657494 | MS.gene06206:intron | 35.0% | |
| CTAAACAACGGAGAAATAGA+AGG | + | chr4.2:3656582-3656601 | MS.gene06206:intron | 35.0% | |
| CTAATCAAACCAAGAATCAG+AGG | - | chr4.2:3657301-3657320 | None:intergenic | 35.0% | |
| GAAACACACTCACTCTATAT+GGG | + | chr4.2:3655887-3655906 | MS.gene06206:intron | 35.0% | |
| GAATATCCAAACTAAGTACC+TGG | - | chr4.2:3658847-3658866 | None:intergenic | 35.0% | |
| GATATGCAATGCACTAGTAA+GGG | - | chr4.2:3658951-3658970 | None:intergenic | 35.0% | |
| GCAAAACAATAGCAGTTTGT+TGG | - | chr4.2:3658146-3658165 | None:intergenic | 35.0% | |
| GGTTAATCAAACATCTGGAA+GGG | + | chr4.2:3657320-3657339 | MS.gene06206:intron | 35.0% | |
| GTAAACCATGGAATTTAAGC+TGG | + | chr4.2:3656609-3656628 | MS.gene06206:intron | 35.0% | |
| GTATCCTACAAAGGTTAACT+TGG | - | chr4.2:3656451-3656470 | None:intergenic | 35.0% | |
| GTATCTTCAGAAACTTCAAG+CGG | - | chr4.2:3658804-3658823 | None:intergenic | 35.0% | |
| GTCATATACCACAAGTTACA+CGG | + | chr4.2:3656530-3656549 | MS.gene06206:intron | 35.0% | |
| GTTAGAAGTGAACAAGTGTT+GGG | + | chr4.2:3656356-3656375 | MS.gene06206:intron | 35.0% | |
| TAAAAGATGGTACTCGTCTT+AGG | - | chr4.2:3655837-3655856 | None:intergenic | 35.0% | |
| TACTTGGATCAATTCCAAAC+TGG | - | chr4.2:3659908-3659927 | None:intergenic | 35.0% | |
| TAGAGTGAGTGTGTTTCAAA+GGG | - | chr4.2:3655884-3655903 | None:intergenic | 35.0% | |
| TATATTACTTGCAGGACCTA+TGG | + | chr4.2:3656264-3656283 | MS.gene06206:intron | 35.0% | |
| TATGCCTTCTGTGTGAATTT+AGG | - | chr4.2:3656424-3656443 | None:intergenic | 35.0% | |
| TCAAAGGGATGTTAAAAGCA+AGG | - | chr4.2:3655341-3655360 | None:intergenic | 35.0% | |
| TCAGATAATATTTCCGAACG+AGG | + | chr4.2:3657200-3657219 | MS.gene06206:CDS | 35.0% | |
| TCATTGTGACATACTAAAGG+AGG | - | chr4.2:3656199-3656218 | None:intergenic | 35.0% | |
| TCTTAAGTAAGCAGAATTGC+AGG | - | chr4.2:3657642-3657661 | None:intergenic | 35.0% | |
| TGAAACACACTCACTCTATA+TGG | + | chr4.2:3655886-3655905 | MS.gene06206:intron | 35.0% | |
| TGACTCATCGTAGAATTGAT+AGG | + | chr4.2:3655594-3655613 | MS.gene06206:intron | 35.0% | |
| TGATCTGATATTGCCATTGA+TGG | + | chr4.2:3659572-3659591 | MS.gene06206:CDS | 35.0% | |
| TGGTTGTTCAAAACCATACA+GGG | - | chr4.2:3658069-3658088 | None:intergenic | 35.0% | |
| TGTACCTAAATTCACACAGA+AGG | + | chr4.2:3656417-3656436 | MS.gene06206:intron | 35.0% | |
| TGTGCACAAGTATTCCTAAA+TGG | - | chr4.2:3658089-3658108 | None:intergenic | 35.0% | |
| TGTGTTTCAAAGGGTAAGTT+GGG | - | chr4.2:3655875-3655894 | None:intergenic | 35.0% | |
| TGTTAGAAGTGAACAAGTGT+TGG | + | chr4.2:3656355-3656374 | MS.gene06206:intron | 35.0% | |
| TGTTTGAACGTATCCTACAA+AGG | - | chr4.2:3656460-3656479 | None:intergenic | 35.0% | |
| TTGGTCTCCAGAAGATATAT+TGG | + | chr4.2:3659720-3659739 | MS.gene06206:CDS | 35.0% | |
| TTTCATGTCTTGTAGGTTTC+AGG | + | chr4.2:3660191-3660210 | MS.gene06206:intron | 35.0% | |
| ! | AATTTTAAGCCAGGAAGATC+TGG | + | chr4.2:3655113-3655132 | MS.gene06206:intron | 35.0% |
| ! | ATTCTATGATGTAGGGTACT+TGG | + | chr4.2:3659701-3659720 | MS.gene06206:intron | 35.0% |
| ! | ATTTTAAGCCAGGAAGATCT+GGG | + | chr4.2:3655114-3655133 | MS.gene06206:intron | 35.0% |
| ! | CTCTACTATGGTGTTTCTAA+TGG | + | chr4.2:3655786-3655805 | MS.gene06206:intron | 35.0% |
| ! | CTCTGATTCTTGGTTTGATT+AGG | + | chr4.2:3657299-3657318 | MS.gene06206:intron | 35.0% |
| ! | GATGCTGGTAACCTTTTATT+TGG | + | chr4.2:3658612-3658631 | MS.gene06206:intron | 35.0% |
| ! | GCTTGAAGTTTCTGAAGATA+CGG | + | chr4.2:3658803-3658822 | MS.gene06206:CDS | 35.0% |
| !! | ATTTGACTTGAAGGTTACAG+TGG | - | chr4.2:3655096-3655115 | None:intergenic | 35.0% |
| !! | GTTCACAGTTTTGTCTTTTC+TGG | + | chr4.2:3660368-3660387 | MS.gene06206:CDS | 35.0% |
| !! | TTTGCCTATGTCACTTTGAA+AGG | - | chr4.2:3658663-3658682 | None:intergenic | 35.0% |
| !!! | AAGTGGTTGTTTTTGTCTCA+GGG | + | chr4.2:3655435-3655454 | MS.gene06206:intron | 35.0% |
| AAACTGTATCCCATGATGAG+GGG | + | chr4.2:3659416-3659435 | MS.gene06206:intron | 40.0% | |
| AAAGTTCTTCTTCTGGATGC+AGG | + | chr4.2:3657374-3657393 | MS.gene06206:CDS | 40.0% | |
| AAGCTGGGTGGTTAAAATAG+AGG | + | chr4.2:3656625-3656644 | MS.gene06206:intron | 40.0% | |
| ACTAGCGATGTAACATCTTC+TGG | + | chr4.2:3659060-3659079 | MS.gene06206:CDS | 40.0% | |
| ACTTACCTAATGGTCTGTTG+AGG | - | chr4.2:3657550-3657569 | None:intergenic | 40.0% | |
| AGATGGAGGAAATGTTGGAT+CGG | - | chr4.2:3655760-3655779 | None:intergenic | 40.0% | |
| AGATTGTGGAAACTAGGCTT+AGG | + | chr4.2:3656879-3656898 | MS.gene06206:intron | 40.0% | |
| ATACTAAAGGAGGAAAGTGG+AGG | - | chr4.2:3656189-3656208 | None:intergenic | 40.0% | |
| ATACTAATGCCCCTCATCAT+GGG | - | chr4.2:3659428-3659447 | None:intergenic | 40.0% | |
| ATCTCAATCTTGTACCCCAA+TGG | + | chr4.2:3660452-3660471 | MS.gene06206:CDS | 40.0% | |
| ATGACAACATTGGAGAGAGT+TGG | + | chr4.2:3656836-3656855 | MS.gene06206:intron | 40.0% | |
| ATGTTGTCAATAACGGTCGT+CGG | - | chr4.2:3658267-3658286 | None:intergenic | 40.0% | |
| ATTGATGGAGACGTTACCAT+TGG | + | chr4.2:3659587-3659606 | MS.gene06206:CDS | 40.0% | |
| CAAAACTGTATCCCATGATG+AGG | + | chr4.2:3659414-3659433 | MS.gene06206:intron | 40.0% | |
| CAATGCACTAGTAAGGGATT+TGG | - | chr4.2:3658945-3658964 | None:intergenic | 40.0% | |
| CAGATAGATTTGTCCCAGTT+TGG | + | chr4.2:3659891-3659910 | MS.gene06206:CDS | 40.0% | |
| CCACTTCAACTAAAAACCAG+CGG | - | chr4.2:3655421-3655440 | None:intergenic | 40.0% | |
| CGAAAAGTCAATCGCTACAT+TGG | - | chr4.2:3659653-3659672 | None:intergenic | 40.0% | |
| CGTTGTTTAGCACTATGGAA+TGG | - | chr4.2:3656572-3656591 | None:intergenic | 40.0% | |
| CTACTTGGATTCATCCATTG+GGG | - | chr4.2:3660469-3660488 | None:intergenic | 40.0% | |
| CTCCAATCTAGTGTGTTGTA+GGG | + | chr4.2:3660025-3660044 | MS.gene06206:intron | 40.0% | |
| CTCTCGTTGTGTGTCTATTA+TGG | + | chr4.2:3656075-3656094 | MS.gene06206:intron | 40.0% | |
| CTGTGTGAATTTAGGTACAG+TGG | - | chr4.2:3656416-3656435 | None:intergenic | 40.0% | |
| GACATACTAAAGGAGGAAAG+TGG | - | chr4.2:3656192-3656211 | None:intergenic | 40.0% | |
| GAGATTATTACCTGGATTGC+AGG | - | chr4.2:3654967-3654986 | None:intergenic | 40.0% | |
| GATTACCTCAACAGACCATT+AGG | + | chr4.2:3657542-3657561 | MS.gene06206:CDS | 40.0% | |
| GCAACCTTTCAAAGTGACAT+AGG | + | chr4.2:3658656-3658675 | MS.gene06206:intron | 40.0% | |
| GCATTAGTATGCAGTTTGAC+GGG | + | chr4.2:3659438-3659457 | MS.gene06206:intron | 40.0% | |
| GCTGGTAAAATGTCACTAGA+GGG | + | chr4.2:3655223-3655242 | MS.gene06206:CDS | 40.0% | |
| GGCATTAGTATGCAGTTTGA+CGG | + | chr4.2:3659437-3659456 | MS.gene06206:intron | 40.0% | |
| GTGTGTTTCAAAGGGTAAGT+TGG | - | chr4.2:3655876-3655895 | None:intergenic | 40.0% | |
| GTGTTTCAAAGGGTAAGTTG+GGG | - | chr4.2:3655874-3655893 | None:intergenic | 40.0% | |
| TCTCATCCAGGTACTTAGTT+TGG | + | chr4.2:3658838-3658857 | MS.gene06206:intron | 40.0% | |
| TCTCCAATCTAGTGTGTTGT+AGG | + | chr4.2:3660024-3660043 | MS.gene06206:intron | 40.0% | |
| TGACAACATTGGAGAGAGTT+GGG | + | chr4.2:3656837-3656856 | MS.gene06206:intron | 40.0% | |
| TGCTCAAAAATAGCCTCGTT+CGG | - | chr4.2:3657216-3657235 | None:intergenic | 40.0% | |
| TGCTGGTAAAATGTCACTAG+AGG | + | chr4.2:3655222-3655241 | MS.gene06206:CDS | 40.0% | |
| TGGAGATCTGCCAATTTAAC+TGG | - | chr4.2:3659087-3659106 | None:intergenic | 40.0% | |
| TGTAACTTATTACCTGCAGC+AGG | - | chr4.2:3659132-3659151 | None:intergenic | 40.0% | |
| TGTTGGATCGGTCAAATAGT+TGG | - | chr4.2:3655748-3655767 | None:intergenic | 40.0% | |
| TTCAGAAACTTCAAGCGGAA+GGG | - | chr4.2:3658799-3658818 | None:intergenic | 40.0% | |
| TTCCAACTTTCACAAAGTGC+AGG | - | chr4.2:3656505-3656524 | None:intergenic | 40.0% | |
| TTCCATTTGGTATACGGTAG+AGG | + | chr4.2:3660081-3660100 | MS.gene06206:intron | 40.0% | |
| TTCCTGCACTTTGTGAAAGT+TGG | + | chr4.2:3656500-3656519 | MS.gene06206:intron | 40.0% | |
| TTCTCCGTTGTTTAGCACTA+TGG | - | chr4.2:3656577-3656596 | None:intergenic | 40.0% | |
| TTGAAGATGACATCTCATCC+AGG | + | chr4.2:3658826-3658845 | MS.gene06206:CDS | 40.0% | |
| ! | AATGGTAACGTCTCCATCAA+TGG | - | chr4.2:3659588-3659607 | None:intergenic | 40.0% |
| ! | CAAACTTTTAGTGTCCAGTC+AGG | - | chr4.2:3658984-3659003 | None:intergenic | 40.0% |
| ! | TCTAGCTTCCTATTTACCAG+AGG | + | chr4.2:3659617-3659636 | MS.gene06206:CDS | 40.0% |
| ! | TTAGGTGATTCGGAAATGTG+TGG | - | chr4.2:3655819-3655838 | None:intergenic | 40.0% |
| ! | TTTGCTTTCTAGTACTGGAG+TGG | + | chr4.2:3660119-3660138 | MS.gene06206:intron | 40.0% |
| !! | AAAGTACTGCTCAAGCTGAA+TGG | + | chr4.2:3656666-3656685 | MS.gene06206:intron | 40.0% |
| !! | AAGATGTTGAGTTGGATGTG+TGG | + | chr4.2:3656787-3656806 | MS.gene06206:intron | 40.0% |
| !! | CACAGTTTTGTCTTTTCTGG+AGG | + | chr4.2:3660371-3660390 | MS.gene06206:CDS | 40.0% |
| !! | GGTTTGTTATGTCTGTTGAC+AGG | + | chr4.2:3655180-3655199 | MS.gene06206:intron | 40.0% |
| !!! | AGGGACTAGTTCATTTTCAG+TGG | + | chr4.2:3655463-3655482 | MS.gene06206:CDS | 40.0% |
| !!! | CTGATTCTTTGTTTTCCCCT+TGG | + | chr4.2:3660338-3660357 | MS.gene06206:intron | 40.0% |
| !!! | GAAGTGGTTGTTTTTGTCTC+AGG | + | chr4.2:3655434-3655453 | MS.gene06206:intron | 40.0% |
| AAACAGACTCACGCATCTGT+AGG | - | chr4.2:3657800-3657819 | None:intergenic | 45.0% | |
| AACTGTGAACTTGTCTGCCA+AGG | - | chr4.2:3660358-3660377 | None:intergenic | 45.0% | |
| AACTTGGTTGTCCCGAACTT+TGG | + | chr4.2:3659027-3659046 | MS.gene06206:CDS | 45.0% | |
| AATAGAGGTCTGGAAAGAGC+AGG | - | chr4.2:3657065-3657084 | None:intergenic | 45.0% | |
| ACCACCCAGCTTAAATTCCA+TGG | - | chr4.2:3656617-3656636 | None:intergenic | 45.0% | |
| ACCATGGAATTTAAGCTGGG+TGG | + | chr4.2:3656613-3656632 | MS.gene06206:intron | 45.0% | |
| ACTGTGAACTTGTCTGCCAA+GGG | - | chr4.2:3660357-3660376 | None:intergenic | 45.0% | |
| AGCCTCTACCGTATACCAAA+TGG | - | chr4.2:3660086-3660105 | None:intergenic | 45.0% | |
| AGGACCTATGGAAACTGTTG+GGG | + | chr4.2:3656276-3656295 | MS.gene06206:intron | 45.0% | |
| ATGGGGCCACCATAATCAAA+TGG | - | chr4.2:3658424-3658443 | None:intergenic | 45.0% | |
| CAGGACCTATGGAAACTGTT+GGG | + | chr4.2:3656275-3656294 | MS.gene06206:intron | 45.0% | |
| CAGTACTTTCGTGTCACATG+AGG | - | chr4.2:3656655-3656674 | None:intergenic | 45.0% | |
| CATACTAATGCCCCTCATCA+TGG | - | chr4.2:3659429-3659448 | None:intergenic | 45.0% | |
| CATCAGGTTCTTCTTCACCA+AGG | - | chr4.2:3658773-3658792 | None:intergenic | 45.0% | |
| CCATAGTAGAGTTGAGCAGA+TGG | - | chr4.2:3655777-3655796 | None:intergenic | 45.0% | |
| CCATCTGCTCAACTCTACTA+TGG | + | chr4.2:3655774-3655793 | MS.gene06206:intron | 45.0% | |
| CGGTCAAATAGTTGGAGGTA+GGG | - | chr4.2:3655740-3655759 | None:intergenic | 45.0% | |
| CTTCAGAAACTTCAAGCGGA+AGG | - | chr4.2:3658800-3658819 | None:intergenic | 45.0% | |
| GACAACATTGGAGAGAGTTG+GGG | + | chr4.2:3656838-3656857 | MS.gene06206:intron | 45.0% | |
| GGAATCTAGGCAAGATGATC+AGG | + | chr4.2:3660422-3660441 | MS.gene06206:CDS | 45.0% | |
| GGAGAAGTAACAACTACAGC+TGG | - | chr4.2:3660009-3660028 | None:intergenic | 45.0% | |
| GGTACTCGTCTTAGGTGATT+CGG | - | chr4.2:3655829-3655848 | None:intergenic | 45.0% | |
| GTCCCTACAACACACTAGAT+TGG | - | chr4.2:3660030-3660049 | None:intergenic | 45.0% | |
| GTTGCATCCACACCAAAGTT+CGG | - | chr4.2:3659042-3659061 | None:intergenic | 45.0% | |
| GTTGGAAAGAGCTGCAAACT+TGG | + | chr4.2:3659011-3659030 | MS.gene06206:intron | 45.0% | |
| GTTGTACGAGACAGTGTTCT+AGG | + | chr4.2:3656720-3656739 | MS.gene06206:intron | 45.0% | |
| TAGTAGAGTTGAGCAGATGG+AGG | - | chr4.2:3655774-3655793 | None:intergenic | 45.0% | |
| TATCCGGTGCAAGTACATAC+CGG | - | chr4.2:3658042-3658061 | None:intergenic | 45.0% | |
| TCCTGACGAAGGTAATCACT+TGG | + | chr4.2:3659238-3659257 | MS.gene06206:intron | 45.0% | |
| TCGGTCAAATAGTTGGAGGT+AGG | - | chr4.2:3655741-3655760 | None:intergenic | 45.0% | |
| TCTCCAAGTCTGAGGAATCT+AGG | + | chr4.2:3660409-3660428 | MS.gene06206:CDS | 45.0% | |
| TGAGCAGATGGAGGAAATGT+TGG | - | chr4.2:3655765-3655784 | None:intergenic | 45.0% | |
| TGGATCGGTCAAATAGTTGG+AGG | - | chr4.2:3655745-3655764 | None:intergenic | 45.0% | |
| TTCTCACTAACAGAGCTCCT+TGG | + | chr4.2:3658753-3658772 | MS.gene06206:intron | 45.0% | |
| TTCTTCTTCTGGATGCAGGT+TGG | + | chr4.2:3657378-3657397 | MS.gene06206:intron | 45.0% | |
| TTCTTGACCTAAGCCAACAC+AGG | + | chr4.2:3657176-3657195 | MS.gene06206:intron | 45.0% | |
| TTGCATCCACACCAAAGTTC+GGG | - | chr4.2:3659041-3659060 | None:intergenic | 45.0% | |
| TTGCCTAGATTCCTCAGACT+TGG | - | chr4.2:3660415-3660434 | None:intergenic | 45.0% | |
| TTGTGGAAACTAGGCTTAGG+TGG | + | chr4.2:3656882-3656901 | MS.gene06206:intron | 45.0% | |
| ! | AACCATACAGGGTGCTTATC+CGG | - | chr4.2:3658058-3658077 | None:intergenic | 45.0% |
| ! | AAGCCTTGTCCTACTAAGTG+GGG | - | chr4.2:3657014-3657033 | None:intergenic | 45.0% |
| ! | AGCGTGTTACTCTTCACTTC+TGG | - | chr4.2:3658723-3658742 | None:intergenic | 45.0% |
| ! | CAAGCCTTGTCCTACTAAGT+GGG | - | chr4.2:3657015-3657034 | None:intergenic | 45.0% |
| ! | GAATCTACTTGCTGACGGAA+AGG | - | chr4.2:3659763-3659782 | None:intergenic | 45.0% |
| ! | TTTTACCAGCACGAAACTCC+AGG | - | chr4.2:3655213-3655232 | None:intergenic | 45.0% |
| ! | TTTTTGTCTCAGGGTGAGGA+GGG | + | chr4.2:3655444-3655463 | MS.gene06206:intron | 45.0% |
| !! | ATCTGATCCTGTGTTGGCTT+AGG | - | chr4.2:3657186-3657205 | None:intergenic | 45.0% |
| !!! | CCGCTGGTTTTTAGTTGAAG+TGG | + | chr4.2:3655418-3655437 | MS.gene06206:intron | 45.0% |
| !!! | GAACGAGGCTATTTTTGAGC+AGG | + | chr4.2:3657215-3657234 | MS.gene06206:CDS | 45.0% |
| !!! | GTTGTTTTTGTCTCAGGGTG+AGG | + | chr4.2:3655440-3655459 | MS.gene06206:intron | 45.0% |
| AAGGACTCGTTCGCATTGCT+AGG | + | chr4.2:3655272-3655291 | MS.gene06206:CDS | 50.0% | |
| ACTTCCATCCCAGATCTTCC+TGG | - | chr4.2:3655125-3655144 | None:intergenic | 50.0% | |
| AGAATTGCAGGATCGTCCAC+TGG | - | chr4.2:3657630-3657649 | None:intergenic | 50.0% | |
| AGGACTCGTTCGCATTGCTA+GGG | + | chr4.2:3655273-3655292 | MS.gene06206:CDS | 50.0% | |
| CAACCCCACTTAGTAGGACA+AGG | + | chr4.2:3657008-3657027 | MS.gene06206:intron | 50.0% | |
| CCACTTAGTAGGACAAGGCT+TGG | + | chr4.2:3657013-3657032 | MS.gene06206:intron | 50.0% | |
| CCTATGGAAACTGTTGGGGA+AGG | + | chr4.2:3656280-3656299 | MS.gene06206:intron | 50.0% | |
| CCTTCCCCAACAGTTTCCAT+AGG | - | chr4.2:3656283-3656302 | None:intergenic | 50.0% | |
| CGCTCGCTCTTTGCGTTTAT+TGG | + | chr4.2:3655020-3655039 | MS.gene06206:intron | 50.0% | |
| CTAAAAACCAGCGGCAGTCA+TGG | - | chr4.2:3655412-3655431 | None:intergenic | 50.0% | |
| CTGTGAACTTGTCTGCCAAG+GGG | - | chr4.2:3660356-3660375 | None:intergenic | 50.0% | |
| CTGTTGACAGGAAACTCTCC+TGG | + | chr4.2:3655192-3655211 | MS.gene06206:intron | 50.0% | |
| CTTGTCCTACTAAGTGGGGT+TGG | - | chr4.2:3657010-3657029 | None:intergenic | 50.0% | |
| GCAGGACCTATGGAAACTGT+TGG | + | chr4.2:3656274-3656293 | MS.gene06206:intron | 50.0% | |
| GCCAAGTGATTACCTTCGTC+AGG | - | chr4.2:3659242-3659261 | None:intergenic | 50.0% | |
| GGATTCTGTCTCCAAGTCTG+AGG | + | chr4.2:3660401-3660420 | MS.gene06206:CDS | 50.0% | |
| GTAGTTCCTGATGCACGCAA+AGG | + | chr4.2:3655253-3655272 | MS.gene06206:CDS | 50.0% | |
| TAAGCCAGGAAGATCTGGGA+TGG | + | chr4.2:3655118-3655137 | MS.gene06206:intron | 50.0% | |
| TCAAGCGGAAGGGATACATC+AGG | - | chr4.2:3658789-3658808 | None:intergenic | 50.0% | |
| TGTAGCCAACCCCACTTAGT+AGG | + | chr4.2:3657002-3657021 | MS.gene06206:intron | 50.0% | |
| TGTAGGTTTCAGGCGTGTGT+AGG | + | chr4.2:3660201-3660220 | MS.gene06206:intron | 50.0% | |
| ! | ACGTGTAAGCCTTATGCCAG+TGG | + | chr4.2:3657611-3657630 | MS.gene06206:intron | 50.0% |
| ! | CCAAGCCTTGTCCTACTAAG+TGG | - | chr4.2:3657016-3657035 | None:intergenic | 50.0% |
| ! | CTACTTGCTGACGGAAAGGT+GGG | - | chr4.2:3659759-3659778 | None:intergenic | 50.0% |
| ! | GTAGGACAAGGCTTGGTTGT+TGG | + | chr4.2:3657020-3657039 | MS.gene06206:intron | 50.0% |
| ! | GTTTTTGTCTCAGGGTGAGG+AGG | + | chr4.2:3655443-3655462 | MS.gene06206:intron | 50.0% |
| ! | TCTACTTGCTGACGGAAAGG+TGG | - | chr4.2:3659760-3659779 | None:intergenic | 50.0% |
| !! | AAGTACATACCGGCTCTACG+TGG | - | chr4.2:3658032-3658051 | None:intergenic | 50.0% |
| !! | AGTACATACCGGCTCTACGT+GGG | - | chr4.2:3658031-3658050 | None:intergenic | 50.0% |
| !! | AGTGGAGGAGTGTTGTTGCA+AGG | - | chr4.2:3656174-3656193 | None:intergenic | 50.0% |
| !! | GATTGCAGGAAAAGCGTCGA+TGG | - | chr4.2:3654953-3654972 | None:intergenic | 50.0% |
| !! | GTCTTTTCTGGAGGCTCTTG+AGG | + | chr4.2:3660380-3660399 | MS.gene06206:CDS | 50.0% |
| !! | GTGGAGGAGTGTTGTTGCAA+GGG | - | chr4.2:3656173-3656192 | None:intergenic | 50.0% |
| !! | TGGAGGAGTGTTGTTGCAAG+GGG | - | chr4.2:3656172-3656191 | None:intergenic | 50.0% |
| AACTCAACCATGACTGCCGC+TGG | + | chr4.2:3655402-3655421 | MS.gene06206:intron | 55.0% | |
| ACGAGTCCTTTGCGTGCATC+AGG | - | chr4.2:3655262-3655281 | None:intergenic | 55.0% | |
| ACTCTCCTGGAGTTTCGTGC+TGG | + | chr4.2:3655205-3655224 | MS.gene06206:CDS | 55.0% | |
| AGCAACATTGGACCTGCTGC+AGG | + | chr4.2:3659117-3659136 | MS.gene06206:CDS | 55.0% | |
| ATTGGGTACCCACGTAGAGC+CGG | + | chr4.2:3658020-3658039 | MS.gene06206:intron | 55.0% | |
| CACCGGATAAGCACCCTGTA+TGG | + | chr4.2:3658053-3658072 | MS.gene06206:intron | 55.0% | |
| CAGGATCGTCCACTGGCATA+AGG | - | chr4.2:3657623-3657642 | None:intergenic | 55.0% | |
| GAAGCTAGACGCTGCTCCAA+TGG | - | chr4.2:3659606-3659625 | None:intergenic | 55.0% | |
| GAGCCGGTATGTACTTGCAC+CGG | + | chr4.2:3658036-3658055 | MS.gene06206:intron | 55.0% | |
| GGTTGTCCCGAACTTTGGTG+TGG | + | chr4.2:3659032-3659051 | MS.gene06206:CDS | 55.0% | |
| TCGCTGCAGGTACTTCGAAC+AGG | + | chr4.2:3659867-3659886 | MS.gene06206:intron | 55.0% | |
| ! | CGACGCTTTTCCTGCAATCC+AGG | + | chr4.2:3654954-3654973 | MS.gene06206:CDS | 55.0% |
| !! | GGAGGAGTGTTGTTGCAAGG+GGG | - | chr4.2:3656171-3656190 | None:intergenic | 55.0% |
| GAGCGAGCGAGCGAGCGAAA+AGG | - | chr4.2:3655005-3655024 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 3654937 | 3660488 | 3654937 | ID=MS.gene06206 |
| chr4.2 | mRNA | 3654937 | 3660488 | 3654937 | ID=MS.gene06206.t1;Parent=MS.gene06206 |
| chr4.2 | exon | 3654937 | 3654975 | 3654937 | ID=MS.gene06206.t1.exon1;Parent=MS.gene06206.t1 |
| chr4.2 | CDS | 3654937 | 3654975 | 3654937 | ID=cds.MS.gene06206.t1;Parent=MS.gene06206.t1 |
| chr4.2 | exon | 3655202 | 3655294 | 3655202 | ID=MS.gene06206.t1.exon2;Parent=MS.gene06206.t1 |
| chr4.2 | CDS | 3655202 | 3655294 | 3655202 | ID=cds.MS.gene06206.t1;Parent=MS.gene06206.t1 |
| chr4.2 | exon | 3655456 | 3655515 | 3655456 | ID=MS.gene06206.t1.exon3;Parent=MS.gene06206.t1 |
| chr4.2 | CDS | 3655456 | 3655515 | 3655456 | ID=cds.MS.gene06206.t1;Parent=MS.gene06206.t1 |
| chr4.2 | exon | 3657198 | 3657236 | 3657198 | ID=MS.gene06206.t1.exon4;Parent=MS.gene06206.t1 |
| chr4.2 | CDS | 3657198 | 3657236 | 3657198 | ID=cds.MS.gene06206.t1;Parent=MS.gene06206.t1 |
| chr4.2 | exon | 3657321 | 3657395 | 3657321 | ID=MS.gene06206.t1.exon5;Parent=MS.gene06206.t1 |
| chr4.2 | CDS | 3657321 | 3657395 | 3657321 | ID=cds.MS.gene06206.t1;Parent=MS.gene06206.t1 |
| chr4.2 | exon | 3657497 | 3657563 | 3657497 | ID=MS.gene06206.t1.exon6;Parent=MS.gene06206.t1 |
| chr4.2 | CDS | 3657497 | 3657563 | 3657497 | ID=cds.MS.gene06206.t1;Parent=MS.gene06206.t1 |
| chr4.2 | exon | 3658766 | 3658847 | 3658766 | ID=MS.gene06206.t1.exon7;Parent=MS.gene06206.t1 |
| chr4.2 | CDS | 3658766 | 3658847 | 3658766 | ID=cds.MS.gene06206.t1;Parent=MS.gene06206.t1 |
| chr4.2 | exon | 3659020 | 3659138 | 3659020 | ID=MS.gene06206.t1.exon8;Parent=MS.gene06206.t1 |
| chr4.2 | CDS | 3659020 | 3659138 | 3659020 | ID=cds.MS.gene06206.t1;Parent=MS.gene06206.t1 |
| chr4.2 | exon | 3659225 | 3659248 | 3659225 | ID=MS.gene06206.t1.exon9;Parent=MS.gene06206.t1 |
| chr4.2 | CDS | 3659225 | 3659248 | 3659225 | ID=cds.MS.gene06206.t1;Parent=MS.gene06206.t1 |
| chr4.2 | exon | 3659544 | 3659638 | 3659544 | ID=MS.gene06206.t1.exon10;Parent=MS.gene06206.t1 |
| chr4.2 | CDS | 3659544 | 3659638 | 3659544 | ID=cds.MS.gene06206.t1;Parent=MS.gene06206.t1 |
| chr4.2 | exon | 3659715 | 3659792 | 3659715 | ID=MS.gene06206.t1.exon11;Parent=MS.gene06206.t1 |
| chr4.2 | CDS | 3659715 | 3659792 | 3659715 | ID=cds.MS.gene06206.t1;Parent=MS.gene06206.t1 |
| chr4.2 | exon | 3659876 | 3659930 | 3659876 | ID=MS.gene06206.t1.exon12;Parent=MS.gene06206.t1 |
| chr4.2 | CDS | 3659876 | 3659930 | 3659876 | ID=cds.MS.gene06206.t1;Parent=MS.gene06206.t1 |
| chr4.2 | exon | 3660364 | 3660488 | 3660364 | ID=MS.gene06206.t1.exon13;Parent=MS.gene06206.t1 |
| chr4.2 | CDS | 3660364 | 3660488 | 3660364 | ID=cds.MS.gene06206.t1;Parent=MS.gene06206.t1 |
| Gene Sequence |
| Protein sequence |
