Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75310.t1 | XP_013461985.1 | 99.8 | 418 | 1 | 0 | 1 | 418 | 41 | 458 | 4.60E-237 | 830.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75310.t1 | P28011 | 99.8 | 418 | 1 | 0 | 1 | 418 | 1 | 418 | 1.9e-239 | 829.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75310.t1 | A0A072V2E4 | 99.8 | 418 | 1 | 0 | 1 | 418 | 1 | 418 | 3.3e-237 | 830.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050353 | MS.gene75310 | 0.824568 | 7.52E-54 | -1.69E-46 |
| MS.gene050354 | MS.gene75310 | 0.823685 | 1.21E-53 | -1.69E-46 |
| MS.gene050800 | MS.gene75310 | 0.876292 | 1.57E-68 | -1.69E-46 |
| MS.gene050926 | MS.gene75310 | 0.823108 | 1.65E-53 | -1.69E-46 |
| MS.gene051113 | MS.gene75310 | 0.826504 | 2.62E-54 | -1.69E-46 |
| MS.gene051694 | MS.gene75310 | -0.835758 | 1.39E-56 | -1.69E-46 |
| MS.gene05234 | MS.gene75310 | 0.813682 | 2.26E-51 | -1.69E-46 |
| MS.gene053421 | MS.gene75310 | 0.805991 | 1.02E-49 | -1.69E-46 |
| MS.gene054435 | MS.gene75310 | 0.819075 | 1.40E-52 | -1.69E-46 |
| MS.gene054437 | MS.gene75310 | 0.829758 | 4.30E-55 | -1.69E-46 |
| MS.gene054447 | MS.gene75310 | 0.830453 | 2.91E-55 | -1.69E-46 |
| MS.gene056942 | MS.gene75310 | -0.809271 | 2.05E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene016021 | MS.gene75310 | PPI |
| MS.gene75310 | MS.gene060918 | PPI |
| MS.gene33167 | MS.gene75310 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75310.t1 | MTR_3g110065 | 99.761 | 418 | 1 | 0 | 1 | 418 | 41 | 458 | 0.0 | 856 |
| MS.gene75310.t1 | MTR_3g110065 | 99.761 | 418 | 1 | 0 | 1 | 418 | 1 | 418 | 0.0 | 855 |
| MS.gene75310.t1 | MTR_3g110065 | 99.744 | 391 | 1 | 0 | 1 | 391 | 41 | 431 | 0.0 | 804 |
| MS.gene75310.t1 | MTR_1g013050 | 56.250 | 400 | 173 | 2 | 12 | 410 | 59 | 457 | 1.25e-164 | 471 |
| MS.gene75310.t1 | MTR_4g080140 | 50.877 | 399 | 194 | 1 | 16 | 414 | 25 | 421 | 2.54e-146 | 422 |
| MS.gene75310.t1 | MTR_4g080130 | 48.622 | 399 | 196 | 3 | 16 | 413 | 20 | 410 | 1.36e-134 | 392 |
| MS.gene75310.t1 | MTR_4g014910 | 50.000 | 54 | 27 | 0 | 288 | 341 | 23 | 76 | 5.32e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75310.t1 | AT5G11520 | 81.731 | 416 | 76 | 0 | 1 | 416 | 32 | 447 | 0.0 | 731 |
| MS.gene75310.t1 | AT5G19550 | 83.127 | 403 | 68 | 0 | 15 | 417 | 2 | 404 | 0.0 | 717 |
| MS.gene75310.t1 | AT1G62800 | 72.772 | 404 | 110 | 0 | 15 | 418 | 2 | 405 | 0.0 | 640 |
| MS.gene75310.t1 | AT1G62800 | 72.277 | 404 | 110 | 1 | 15 | 418 | 2 | 403 | 0.0 | 632 |
| MS.gene75310.t1 | AT1G62800 | 70.710 | 338 | 99 | 0 | 15 | 352 | 2 | 339 | 0.0 | 525 |
| MS.gene75310.t1 | AT4G31990 | 54.545 | 396 | 178 | 2 | 16 | 410 | 51 | 445 | 2.87e-161 | 462 |
| MS.gene75310.t1 | AT4G31990 | 54.545 | 396 | 178 | 2 | 16 | 410 | 51 | 445 | 2.87e-161 | 462 |
| MS.gene75310.t1 | AT4G31990 | 54.545 | 396 | 178 | 2 | 16 | 410 | 46 | 440 | 9.15e-161 | 460 |
| MS.gene75310.t1 | AT4G31990 | 54.545 | 396 | 178 | 2 | 16 | 410 | 51 | 445 | 1.03e-160 | 461 |
| MS.gene75310.t1 | AT2G30970 | 52.174 | 391 | 185 | 1 | 24 | 414 | 39 | 427 | 8.00e-148 | 427 |
| MS.gene75310.t1 | AT2G30970 | 52.174 | 391 | 185 | 1 | 24 | 414 | 39 | 427 | 8.00e-148 | 427 |
Find 113 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACCCAAGTTGAGCTTAAT+TGG | 0.150989 | 3.3:+90365694 | None:intergenic |
| GCGAAGAACATGGGTCTTTA+TGG | 0.189310 | 3.3:-90363610 | MS.gene75310:CDS |
| TTTCTTTGACAGTGCTTATC+AGG | 0.256759 | 3.3:-90363973 | MS.gene75310:intron |
| AGTCACATTATCAAGCAAAT+TGG | 0.295698 | 3.3:-90362780 | MS.gene75310:CDS |
| ACCACTGTTCAAGGCTTATC+TGG | 0.296478 | 3.3:-90364565 | MS.gene75310:CDS |
| AGCCAGATGTGGGACTGTTT+TGG | 0.314178 | 3.3:+90362021 | None:intergenic |
| GCCCTGCTATTCAAGAGAAC+AGG | 0.323064 | 3.3:-90364591 | MS.gene75310:CDS |
| AAGTCAAGCCCTCGTGTTGC+TGG | 0.342959 | 3.3:+90364294 | None:intergenic |
| CATCAGATGTCAGGTATATA+TGG | 0.350575 | 3.3:+90362700 | None:intergenic |
| GATCTTGGTTCTGCCCCATC+TGG | 0.359579 | 3.3:-90364104 | MS.gene75310:CDS |
| TACTCAAGTCCTCCTATTCA+TGG | 0.370617 | 3.3:-90363244 | MS.gene75310:CDS |
| AAGGAGTATATTCCAATTGT+TGG | 0.372264 | 3.3:-90364874 | MS.gene75310:CDS |
| TGCTGATGGTGGAGAATTGC+TGG | 0.380748 | 3.3:-90363647 | MS.gene75310:CDS |
| ACAGGACTTCTTGAGGATCT+TGG | 0.382872 | 3.3:-90364119 | MS.gene75310:intron |
| TATACTTGCCAACACCTACT+TGG | 0.385684 | 3.3:-90364380 | MS.gene75310:CDS |
| GTACTGGTTCGCTAAGAGTT+GGG | 0.400671 | 3.3:-90364543 | MS.gene75310:CDS |
| CACCCAAGTTGAGCTTAATT+GGG | 0.413455 | 3.3:+90365695 | None:intergenic |
| CTCCAAAACAGTCCCACATC+TGG | 0.425931 | 3.3:-90362023 | MS.gene75310:CDS |
| ATTGGAATGTTTACTTTCAC+AGG | 0.428060 | 3.3:-90362762 | MS.gene75310:CDS |
| GTTCAAGGCTTATCTGGTAC+TGG | 0.432196 | 3.3:-90364559 | MS.gene75310:CDS |
| ACACCGAGGATAGGATCTTC+AGG | 0.432488 | 3.3:+90366169 | None:intergenic |
| ATACTTGCCAACACCTACTT+GGG | 0.432758 | 3.3:-90364379 | MS.gene75310:CDS |
| AAGTTGAGCTTAATTGGGCT+TGG | 0.436518 | 3.3:+90365700 | None:intergenic |
| AGGAGTATATTCCAATTGTT+GGG | 0.451682 | 3.3:-90364873 | MS.gene75310:CDS |
| TGCAGGAGGATTAGCATGGC+TGG | 0.453349 | 3.3:-90362052 | MS.gene75310:intron |
| AACAGGGTTACCACTGTTCA+AGG | 0.453722 | 3.3:-90364574 | MS.gene75310:CDS |
| ACCCTGTTCTCTTGAATAGC+AGG | 0.458243 | 3.3:+90364589 | None:intergenic |
| GTTCGTTTGTTTGTTGCTGA+TGG | 0.463816 | 3.3:-90363661 | MS.gene75310:CDS |
| TGATCCAACGCTTGAACAAT+GGG | 0.468112 | 3.3:-90364036 | MS.gene75310:CDS |
| CCATGTTCTTCGCATAACTC+TGG | 0.469261 | 3.3:+90363620 | None:intergenic |
| AAATCAGCGAGCCCAACAAT+TGG | 0.471038 | 3.3:+90364862 | None:intergenic |
| ACACGAGGGCTTGACTTTCA+AGG | 0.475131 | 3.3:-90364288 | MS.gene75310:intron |
| CATATATACCTGACATCTGA+TGG | 0.476268 | 3.3:-90362699 | MS.gene75310:CDS |
| TGACTGGACTATTGAGTTGA+AGG | 0.476617 | 3.3:-90363098 | MS.gene75310:CDS |
| ACAATGGATGCACCATGAAT+AGG | 0.476661 | 3.3:+90363232 | None:intergenic |
| CATTGAAATTTAAGCAACTC+GGG | 0.476742 | 3.3:+90361976 | None:intergenic |
| TGCTCCCATTGTTCAAGCGT+TGG | 0.479098 | 3.3:+90364032 | None:intergenic |
| GGTACTGGTTCGCTAAGAGT+TGG | 0.481361 | 3.3:-90364544 | MS.gene75310:CDS |
| GTCAAGATGGAAACTTGCTC+AGG | 0.481636 | 3.3:+90362732 | None:intergenic |
| AATAGGAGGACTTGAGTACA+TGG | 0.483790 | 3.3:+90363249 | None:intergenic |
| GCCAACTGAAACTTGTGATT+AGG | 0.484457 | 3.3:-90363273 | MS.gene75310:CDS |
| TCAGGGATTTGTACAATGAC+TGG | 0.487365 | 3.3:-90363114 | MS.gene75310:intron |
| ATGGTACTCTTTAGTCAAGA+TGG | 0.489731 | 3.3:+90362719 | None:intergenic |
| TTGATCCAACGCTTGAACAA+TGG | 0.495724 | 3.3:-90364037 | MS.gene75310:CDS |
| CTAACATGTCATTCAATAGT+TGG | 0.496646 | 3.3:+90365000 | None:intergenic |
| GAATAGGTACACCAGGTGAT+TGG | 0.497772 | 3.3:-90362803 | MS.gene75310:intron |
| TCAGCAACAAACAAACGAAC+AGG | 0.500179 | 3.3:+90363664 | None:intergenic |
| TCAGAAGAAGCGGTTGGAGA+AGG | 0.502905 | 3.3:+90366220 | None:intergenic |
| TACTGGTTCGCTAAGAGTTG+GGG | 0.504319 | 3.3:-90364542 | MS.gene75310:CDS |
| TGTCTTACCCATCAGATGTC+AGG | 0.505685 | 3.3:+90362691 | None:intergenic |
| TCACTACCTGTCCTTGAGAA+TGG | 0.510089 | 3.3:+90363204 | None:intergenic |
| AAGCCCAATTAAGCTCAACT+TGG | 0.516784 | 3.3:-90365698 | MS.gene75310:CDS |
| CGTTTGTTTGTTGCTGATGG+TGG | 0.521870 | 3.3:-90363658 | MS.gene75310:CDS |
| CCAGAGTTATGCGAAGAACA+TGG | 0.522554 | 3.3:-90363620 | MS.gene75310:CDS |
| CTTGAGAATGGCGGCCACAA+TGG | 0.525791 | 3.3:+90363216 | None:intergenic |
| ATTAAGCTCAACTTGGGTGT+TGG | 0.529955 | 3.3:-90365691 | MS.gene75310:CDS |
| ACGAACAAGATGAGCGAAGA+CGG | 0.531051 | 3.3:+90366195 | None:intergenic |
| ATCTGCATCTAGACTTCCAC+TGG | 0.543479 | 3.3:+90363693 | None:intergenic |
| CATGTTCTTCGCATAACTCT+GGG | 0.545873 | 3.3:+90363621 | None:intergenic |
| TGGCCGCCATTCTCAAGGAC+AGG | 0.547950 | 3.3:-90363210 | MS.gene75310:intron |
| ATAAGATTCTAACCTCAGTT+CGG | 0.549064 | 3.3:+90365662 | None:intergenic |
| TGATAAGCACTGTCAAAGAA+AGG | 0.550216 | 3.3:+90363975 | None:intergenic |
| TTTGTATGATTGCCCCAAGT+AGG | 0.551425 | 3.3:+90364366 | None:intergenic |
| AGTCAGCGGATGTTTCAAGC+AGG | 0.552000 | 3.3:-90363303 | MS.gene75310:CDS |
| GTTCCTTACAGGACTTCTTG+AGG | 0.552621 | 3.3:-90364126 | MS.gene75310:intron |
| ACATTGAAATTTAAGCAACT+CGG | 0.554651 | 3.3:+90361975 | None:intergenic |
| GCCTAATCACAAGTTTCAGT+TGG | 0.558972 | 3.3:+90363272 | None:intergenic |
| GCAAAACAACAGATCCAGAT+GGG | 0.564621 | 3.3:+90364090 | None:intergenic |
| TTTGATGCTTTACGTGCTAG+AGG | 0.574452 | 3.3:-90363037 | MS.gene75310:intron |
| ACGGAATCAGAAGAAGCGGT+TGG | 0.574811 | 3.3:+90366214 | None:intergenic |
| TGAAATGCTTACAATGCTCA+AGG | 0.575001 | 3.3:+90363573 | None:intergenic |
| CATTGTGGCCGCCATTCTCA+AGG | 0.579863 | 3.3:-90363215 | MS.gene75310:CDS |
| GGAAGGTAAACCCCTTGTGT+TGG | 0.582281 | 3.3:-90365045 | MS.gene75310:CDS |
| GCTCCTGAAGATCCTATCCT+CGG | 0.583735 | 3.3:-90366172 | MS.gene75310:CDS |
| TGCAATTGAATAGGTACACC+AGG | 0.584729 | 3.3:-90362810 | MS.gene75310:intron |
| CCCTGCTATTCAAGAGAACA+GGG | 0.585827 | 3.3:-90364590 | MS.gene75310:CDS |
| TACTATGCTCCAGCAACACG+AGG | 0.591280 | 3.3:-90364303 | MS.gene75310:CDS |
| AGCGTTGGATCAACACCAGT+AGG | 0.595444 | 3.3:+90364047 | None:intergenic |
| GGTCTTTATGGTGAACGTGT+TGG | 0.597249 | 3.3:-90363598 | MS.gene75310:CDS |
| AGCCCAATTAAGCTCAACTT+GGG | 0.600473 | 3.3:-90365697 | MS.gene75310:CDS |
| CCCTGTTCTCTTGAATAGCA+GGG | 0.601948 | 3.3:+90364590 | None:intergenic |
| GCCTCACAACATCCAACACA+AGG | 0.602594 | 3.3:+90365033 | None:intergenic |
| ATATATACCTGACATCTGAT+GGG | 0.603581 | 3.3:-90362698 | MS.gene75310:intron |
| GCATGTGCACATAACCCTAC+TGG | 0.605334 | 3.3:-90364062 | MS.gene75310:CDS |
| AACAAACATACACCGAGGAT+AGG | 0.605565 | 3.3:+90366160 | None:intergenic |
| ACCAGATAAGCCTTGAACAG+TGG | 0.611040 | 3.3:+90364564 | None:intergenic |
| GTCAGCGGATGTTTCAAGCA+GGG | 0.615517 | 3.3:-90363302 | MS.gene75310:CDS |
| TATTCATGGTGCATCCATTG+TGG | 0.615918 | 3.3:-90363230 | MS.gene75310:CDS |
| AGCAAAACAACAGATCCAGA+TGG | 0.618409 | 3.3:+90364089 | None:intergenic |
| GACTATTGAGTTGAAGGCAA+TGG | 0.618768 | 3.3:-90363092 | MS.gene75310:CDS |
| CAGAGTTATGCGAAGAACAT+GGG | 0.621421 | 3.3:-90363619 | MS.gene75310:CDS |
| ATGGATGCACCATGAATAGG+AGG | 0.622449 | 3.3:+90363235 | None:intergenic |
| TTGGAATGTTTACTTTCACA+GGG | 0.622534 | 3.3:-90362761 | MS.gene75310:CDS |
| GCGTTGGATCAACACCAGTA+GGG | 0.625083 | 3.3:+90364048 | None:intergenic |
| TGTATTGCATCAGCCAGATG+TGG | 0.629141 | 3.3:+90362010 | None:intergenic |
| ATTGTGCAGGAGGATTAGCA+TGG | 0.631015 | 3.3:-90362056 | MS.gene75310:intron |
| TCCCCAGGTCAGCAAGTCAG+CGG | 0.637569 | 3.3:-90363317 | MS.gene75310:intron |
| GTATTGCATCAGCCAGATGT+GGG | 0.644231 | 3.3:+90362011 | None:intergenic |
| GAAGACGGAATCAGAAGAAG+CGG | 0.647565 | 3.3:+90366210 | None:intergenic |
| CCCTTGTGTTGGATGTTGTG+AGG | 0.649198 | 3.3:-90365034 | MS.gene75310:CDS |
| GGTAACTGTCGCTTACAACA+AGG | 0.650998 | 3.3:-90365725 | MS.gene75310:CDS |
| TACTTGGGGCAATCATACAA+AGG | 0.652701 | 3.3:-90364364 | MS.gene75310:CDS |
| CTCACAACATCCAACACAAG+GGG | 0.662888 | 3.3:+90365035 | None:intergenic |
| TGATTGCCCCAAGTAGGTGT+TGG | 0.664181 | 3.3:+90364372 | None:intergenic |
| TACTTGCCAACACCTACTTG+GGG | 0.669923 | 3.3:-90364378 | MS.gene75310:CDS |
| TGTTGGTGCTTACCGAACTG+AGG | 0.670501 | 3.3:-90365674 | MS.gene75310:intron |
| ATAATGTGACTCCAATCACC+TGG | 0.679037 | 3.3:+90362792 | None:intergenic |
| CCTCACAACATCCAACACAA+GGG | 0.691571 | 3.3:+90365034 | None:intergenic |
| ACTGGTTCGCTAAGAGTTGG+GGG | 0.694356 | 3.3:-90364541 | MS.gene75310:CDS |
| CTACCTGTCCTTGAGAATGG+CGG | 0.699592 | 3.3:+90363207 | None:intergenic |
| ACTATGCTCCAGCAACACGA+GGG | 0.711939 | 3.3:-90364302 | MS.gene75310:CDS |
| CAAAACAACAGATCCAGATG+GGG | 0.713598 | 3.3:+90364091 | None:intergenic |
| ATAGGAGGACTTGAGTACAT+GGG | 0.714033 | 3.3:+90363250 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGCATAATAATTTAAAAAA+TGG | - | chr3.3:90362669-90362688 | MS.gene75310:intron | 10.0% |
| !! | TTAGTTAAAAAAATATAAAG+GGG | + | chr3.3:90363767-90363786 | None:intergenic | 10.0% |
| !!! | AAGAATTTATTTTGTTATTA+AGG | - | chr3.3:90365814-90365833 | MS.gene75310:intron | 10.0% |
| !!! | TTTTTTAAATTATTATGCAT+TGG | + | chr3.3:90362669-90362688 | None:intergenic | 10.0% |
| !! | CAAAAAAAAAAAAAAAACAC+AGG | + | chr3.3:90362451-90362470 | None:intergenic | 15.0% |
| !!! | GAATATTTTTTTTTTTTTGG+TGG | + | chr3.3:90363568-90363587 | None:intergenic | 15.0% |
| !! | AAATGAATGATTACACATAA+GGG | + | chr3.3:90366111-90366130 | None:intergenic | 20.0% |
| !! | AATATCACAAATCTTATGTT+AGG | - | chr3.3:90362950-90362969 | MS.gene75310:intron | 20.0% |
| !! | CATAATTGGATTTCATTTAA+TGG | - | chr3.3:90364062-90364081 | MS.gene75310:CDS | 20.0% |
| !! | TAAATGAATGATTACACATA+AGG | + | chr3.3:90366112-90366131 | None:intergenic | 20.0% |
| !! | TACATACTTTCAAAAATCTT+TGG | + | chr3.3:90365936-90365955 | None:intergenic | 20.0% |
| !! | TCAATACTCAATAACATAAT+TGG | - | chr3.3:90364048-90364067 | MS.gene75310:CDS | 20.0% |
| !! | TTATTAACAGCAAAAGAAAT+TGG | + | chr3.3:90365679-90365698 | None:intergenic | 20.0% |
| !! | TTCAATAAAAGAATATGCAT+TGG | + | chr3.3:90364470-90364489 | None:intergenic | 20.0% |
| !!! | AGGTTAGAATCTTATTTATT+TGG | - | chr3.3:90362572-90362591 | MS.gene75310:intron | 20.0% |
| !!! | ATTAAATGGAGACAATTTTA+TGG | - | chr3.3:90364680-90364699 | MS.gene75310:intron | 20.0% |
| !!! | ATTTATTTTGTTATTAAGGC+TGG | - | chr3.3:90365818-90365837 | MS.gene75310:intron | 20.0% |
| !!! | GGTTAGAATCTTATTTATTT+GGG | - | chr3.3:90362573-90362592 | MS.gene75310:intron | 20.0% |
| !!! | GTTTTCTCATAAACTATTTT+GGG | - | chr3.3:90362855-90362874 | MS.gene75310:intron | 20.0% |
| !!! | TAATCATCTTTTGCATAATT+TGG | - | chr3.3:90363015-90363034 | MS.gene75310:intron | 20.0% |
| !!! | TGTTTTCTCATAAACTATTT+TGG | - | chr3.3:90362854-90362873 | MS.gene75310:intron | 20.0% |
| !!! | TTAAATGGAGACAATTTTAT+GGG | - | chr3.3:90364681-90364700 | MS.gene75310:intron | 20.0% |
| !!! | TTTTCTCATAAACTATTTTG+GGG | - | chr3.3:90362856-90362875 | MS.gene75310:intron | 20.0% |
| ! | AAAAGATGATTATGCAGTAT+AGG | + | chr3.3:90363007-90363026 | None:intergenic | 25.0% |
| ! | AAGATTCAAGAGATTAGAAA+TGG | + | chr3.3:90364377-90364396 | None:intergenic | 25.0% |
| ! | ACTCTTTCTTTACTATCAAA+TGG | + | chr3.3:90362829-90362848 | None:intergenic | 25.0% |
| ! | AGGGAAAAAATCATATTGAA+TGG | + | chr3.3:90364748-90364767 | None:intergenic | 25.0% |
| ! | AGTTATGCATAATTTATGCA+AGG | - | chr3.3:90363531-90363550 | MS.gene75310:intron | 25.0% |
| ! | ATTGTAGAAAAGGAAAATCA+GGG | + | chr3.3:90364883-90364902 | None:intergenic | 25.0% |
| ! | CAACTCAAATAAATGTTTCA+TGG | + | chr3.3:90365383-90365402 | None:intergenic | 25.0% |
| ! | GGGAAAAAATCATATTGAAT+GGG | + | chr3.3:90364747-90364766 | None:intergenic | 25.0% |
| ! | TAATATTGCTGTATATCGTT+GGG | - | chr3.3:90363784-90363803 | MS.gene75310:intron | 25.0% |
| ! | TATTGATCATGATGCATATT+GGG | + | chr3.3:90364034-90364053 | None:intergenic | 25.0% |
| ! | TATTGTAGAAAAGGAAAATC+AGG | + | chr3.3:90364884-90364903 | None:intergenic | 25.0% |
| ! | TGACTTGATTAAGAGAATAA+TGG | + | chr3.3:90365748-90365767 | None:intergenic | 25.0% |
| ! | TTGATACAAATGCGAAAATA+AGG | + | chr3.3:90364000-90364019 | None:intergenic | 25.0% |
| !! | AAAAGAAAGTATAGTGAATC+AGG | + | chr3.3:90363254-90363273 | None:intergenic | 25.0% |
| !! | AAGCATTTCAAAGCATTAAA+TGG | - | chr3.3:90364666-90364685 | MS.gene75310:intron | 25.0% |
| !! | AATCGTCAGTAACAAAATTT+TGG | + | chr3.3:90362414-90362433 | None:intergenic | 25.0% |
| !! | AATCTTATTTATTTGGGATG+TGG | - | chr3.3:90362579-90362598 | MS.gene75310:intron | 25.0% |
| !! | TGAAATATATAGGCATTGTT+TGG | - | chr3.3:90362748-90362767 | MS.gene75310:CDS | 25.0% |
| !! | TTTTTCTACATAAAGAAGCT+TGG | - | chr3.3:90364827-90364846 | MS.gene75310:CDS | 25.0% |
| !!! | ACATCTATTTTTGTTCAACA+GGG | - | chr3.3:90364505-90364524 | MS.gene75310:intron | 25.0% |
| !!! | GTCTTCATTCTGAAATATAT+AGG | - | chr3.3:90362738-90362757 | MS.gene75310:CDS | 25.0% |
| !!! | GTTGCATTCTTTTTAGTTTA+AGG | - | chr3.3:90365992-90366011 | MS.gene75310:intron | 25.0% |
| AAAGTATGTACTGTTTGATG+TGG | - | chr3.3:90365946-90365965 | MS.gene75310:intron | 30.0% | |
| AAGAATATGCATTGGAGATA+TGG | + | chr3.3:90364462-90364481 | None:intergenic | 30.0% | |
| ACATGATTCAAATCATAAGC+AGG | + | chr3.3:90364768-90364787 | None:intergenic | 30.0% | |
| AGTCACATTATCAAGCAAAT+TGG | - | chr3.3:90365446-90365465 | MS.gene75310:intron | 30.0% | |
| ATAAGATTCTAACCTCAGTT+CGG | + | chr3.3:90362567-90362586 | None:intergenic | 30.0% | |
| ATATATACCTGACATCTGAT+GGG | - | chr3.3:90365528-90365547 | MS.gene75310:intron | 30.0% | |
| ATTGAATGGGATGAAATACA+AGG | + | chr3.3:90364734-90364753 | None:intergenic | 30.0% | |
| ATTGGAATGTTTACTTTCAC+AGG | - | chr3.3:90365464-90365483 | MS.gene75310:intron | 30.0% | |
| CATGATTCAAATCATAAGCA+GGG | + | chr3.3:90364767-90364786 | None:intergenic | 30.0% | |
| CTAACATGTCATTCAATAGT+TGG | + | chr3.3:90363229-90363248 | None:intergenic | 30.0% | |
| CTAATATTGCTGTATATCGT+TGG | - | chr3.3:90363783-90363802 | MS.gene75310:intron | 30.0% | |
| CTGTTGAACAAAAATAGATG+TGG | + | chr3.3:90364506-90364525 | None:intergenic | 30.0% | |
| GAAATATATATCCATGCTGT+AGG | + | chr3.3:90366082-90366101 | None:intergenic | 30.0% | |
| GATTGAATTTCAAAGCGATA+CGG | - | chr3.3:90362284-90362303 | MS.gene75310:intron | 30.0% | |
| GTCATTGAAAATGCATGTTA+AGG | - | chr3.3:90363037-90363056 | MS.gene75310:intron | 30.0% | |
| TAAGGAATGATAGATCGATA+AGG | - | chr3.3:90363055-90363074 | MS.gene75310:CDS | 30.0% | |
| TATTTCTCCTGCAATTGAAT+AGG | - | chr3.3:90365407-90365426 | MS.gene75310:intron | 30.0% | |
| TCTTAATGAGATGACGAAAT+TGG | + | chr3.3:90362165-90362184 | None:intergenic | 30.0% | |
| TGATAAAGAACTGTACAGAA+AGG | + | chr3.3:90365256-90365275 | None:intergenic | 30.0% | |
| TGTGTCTGTGTTTGAAAAAT+AGG | - | chr3.3:90362480-90362499 | MS.gene75310:intron | 30.0% | |
| TTCAAGAGATTAGAAATGGT+TGG | + | chr3.3:90364373-90364392 | None:intergenic | 30.0% | |
| TTGGAATGTTTACTTTCACA+GGG | - | chr3.3:90365465-90365484 | MS.gene75310:intron | 30.0% | |
| ! | AAGGAGTATATTCCAATTGT+TGG | - | chr3.3:90363352-90363371 | MS.gene75310:intron | 30.0% |
| ! | AGAATCTTTTGCAATTCCTT+TGG | - | chr3.3:90365225-90365244 | MS.gene75310:intron | 30.0% |
| ! | AGGAGTATATTCCAATTGTT+GGG | - | chr3.3:90363353-90363372 | MS.gene75310:intron | 30.0% |
| ! | GTAAAGCATCAAAAAGTTGT+TGG | + | chr3.3:90365182-90365201 | None:intergenic | 30.0% |
| ! | GTATTGATCATGATGCATAT+TGG | + | chr3.3:90364035-90364054 | None:intergenic | 30.0% |
| ! | TCAAAAACACATGTTACTTG+TGG | + | chr3.3:90364853-90364872 | None:intergenic | 30.0% |
| ! | TCATACAAAGGTTTTCAACT+TGG | - | chr3.3:90363874-90363893 | MS.gene75310:intron | 30.0% |
| !! | TGACTTGTGAGTTTTACTAA+TGG | - | chr3.3:90363142-90363161 | MS.gene75310:intron | 30.0% |
| !! | TTCTGTTCTGCATTGTTTTT+AGG | - | chr3.3:90363320-90363339 | MS.gene75310:intron | 30.0% |
| !! | TTGAGTGCTAAGCTTATTTT+TGG | - | chr3.3:90363394-90363413 | MS.gene75310:intron | 30.0% |
| !!! | CACATCTATTTTTGTTCAAC+AGG | - | chr3.3:90364504-90364523 | MS.gene75310:intron | 30.0% |
| AAAGAAATTGGACAACAGCA+TGG | + | chr3.3:90365667-90365686 | None:intergenic | 35.0% | |
| AAGAAAACAAACATACACCG+AGG | + | chr3.3:90362074-90362093 | None:intergenic | 35.0% | |
| AAGATCAAGGCAAACAAACA+CGG | + | chr3.3:90363814-90363833 | None:intergenic | 35.0% | |
| AGGGCTATGTTCAAAAAAGT+GGG | + | chr3.3:90363620-90363639 | None:intergenic | 35.0% | |
| ATAAAGGGGAGAGAAAGTTA+AGG | + | chr3.3:90363753-90363772 | None:intergenic | 35.0% | |
| ATAATGCGCTGAAAAGATCA+AGG | + | chr3.3:90363827-90363846 | None:intergenic | 35.0% | |
| ATCTGTAGTGATTAGTGATC+TGG | - | chr3.3:90364708-90364727 | MS.gene75310:intron | 35.0% | |
| ATGGTACTCTTTAGTCAAGA+TGG | + | chr3.3:90365510-90365529 | None:intergenic | 35.0% | |
| ATTGTACAAATCCCTGAAAG+AGG | + | chr3.3:90365109-90365128 | None:intergenic | 35.0% | |
| CATATATACCTGACATCTGA+TGG | - | chr3.3:90365527-90365546 | MS.gene75310:intron | 35.0% | |
| CATCAGATGTCAGGTATATA+TGG | + | chr3.3:90365529-90365548 | None:intergenic | 35.0% | |
| CATGCATTTGTTTATTGTGC+AGG | - | chr3.3:90366157-90366176 | MS.gene75310:intron | 35.0% | |
| TGAAATGCTTACAATGCTCA+AGG | + | chr3.3:90364656-90364675 | None:intergenic | 35.0% | |
| TTATGCAGTATAGGTCTGTT+TGG | + | chr3.3:90362998-90363017 | None:intergenic | 35.0% | |
| TTCAATTAGTTCAGACGAGT+AGG | - | chr3.3:90365575-90365594 | MS.gene75310:intron | 35.0% | |
| TTTCTTTGACAGTGCTTATC+AGG | - | chr3.3:90364253-90364272 | MS.gene75310:intron | 35.0% | |
| ! | CATGGATTATCCCAAGAAAT+GGG | + | chr3.3:90364407-90364426 | None:intergenic | 35.0% |
| ! | GGTAGAAGTATATTCTTGTG+TGG | + | chr3.3:90364441-90364460 | None:intergenic | 35.0% |
| ! | TGATAAGCACTGTCAAAGAA+AGG | + | chr3.3:90364254-90364273 | None:intergenic | 35.0% |
| !! | GGGAGCATTTATTGTAGAAA+AGG | + | chr3.3:90364893-90364912 | None:intergenic | 35.0% |
| !!! | TTTTTTTTGGTGGTGAACCT+CGG | + | chr3.3:90363558-90363577 | None:intergenic | 35.0% |
| AACAAACATACACCGAGGAT+AGG | + | chr3.3:90362069-90362088 | None:intergenic | 40.0% | |
| AAGAAGTCCTGTAAGGAACA+AGG | + | chr3.3:90364099-90364118 | None:intergenic | 40.0% | |
| AAGCCCAATTAAGCTCAACT+TGG | - | chr3.3:90362528-90362547 | MS.gene75310:intron | 40.0% | |
| AAGTGGGCAAAAGAACAGTT+AGG | + | chr3.3:90363604-90363623 | None:intergenic | 40.0% | |
| AAGTTGAGCTTAATTGGGCT+TGG | + | chr3.3:90362529-90362548 | None:intergenic | 40.0% | |
| AATAGGAGGACTTGAGTACA+TGG | + | chr3.3:90364980-90364999 | None:intergenic | 40.0% | |
| AATCCTTGAAAGATTCTCGC+AGG | + | chr3.3:90365354-90365373 | None:intergenic | 40.0% | |
| AATGCATGTCTCGAGTTATG+TGG | + | chr3.3:90366145-90366164 | None:intergenic | 40.0% | |
| ACAATGGATGCACCATGAAT+AGG | + | chr3.3:90364997-90365016 | None:intergenic | 40.0% | |
| ACCATTGAGAAACTTGTGTG+TGG | - | chr3.3:90364311-90364330 | MS.gene75310:CDS | 40.0% | |
| AGCAAAACAACAGATCCAGA+TGG | + | chr3.3:90364140-90364159 | None:intergenic | 40.0% | |
| AGCCCAATTAAGCTCAACTT+GGG | - | chr3.3:90362529-90362548 | MS.gene75310:intron | 40.0% | |
| AGTTGCAATGTGCAACATGT+TGG | - | chr3.3:90365705-90365724 | MS.gene75310:CDS | 40.0% | |
| ATAATGTGACTCCAATCACC+TGG | + | chr3.3:90365437-90365456 | None:intergenic | 40.0% | |
| ATACTTGCCAACACCTACTT+GGG | - | chr3.3:90363847-90363866 | MS.gene75310:intron | 40.0% | |
| ATAGGAGGACTTGAGTACAT+GGG | + | chr3.3:90364979-90364998 | None:intergenic | 40.0% | |
| ATTAAGCTCAACTTGGGTGT+TGG | - | chr3.3:90362535-90362554 | MS.gene75310:intron | 40.0% | |
| CAAAACAACAGATCCAGATG+GGG | + | chr3.3:90364138-90364157 | None:intergenic | 40.0% | |
| CAAATCACATGTGTCAGTGT+TGG | - | chr3.3:90362705-90362724 | MS.gene75310:CDS | 40.0% | |
| CAATATACTTCTGCTTCCCT+TGG | - | chr3.3:90365047-90365066 | MS.gene75310:CDS | 40.0% | |
| CAGAGTTATGCGAAGAACAT+GGG | - | chr3.3:90364607-90364626 | MS.gene75310:intron | 40.0% | |
| CAGGGCTATGTTCAAAAAAG+TGG | + | chr3.3:90363621-90363640 | None:intergenic | 40.0% | |
| CATAATTTATGCAAGGTCCG+AGG | - | chr3.3:90363538-90363557 | MS.gene75310:intron | 40.0% | |
| CATGTTCTTCGCATAACTCT+GGG | + | chr3.3:90364608-90364627 | None:intergenic | 40.0% | |
| CCATTTCTTGGGATAATCCA+TGG | - | chr3.3:90364405-90364424 | MS.gene75310:intron | 40.0% | |
| CTTGAAGCTTCCCATTTCTT+GGG | - | chr3.3:90364394-90364413 | MS.gene75310:intron | 40.0% | |
| GCAAAACAACAGATCCAGAT+GGG | + | chr3.3:90364139-90364158 | None:intergenic | 40.0% | |
| GCATTTGTTTATTGTGCAGG+AGG | - | chr3.3:90366160-90366179 | MS.gene75310:intron | 40.0% | |
| GCCAACTGAAACTTGTGATT+AGG | - | chr3.3:90364953-90364972 | MS.gene75310:intron | 40.0% | |
| GCCTAATCACAAGTTTCAGT+TGG | + | chr3.3:90364957-90364976 | None:intergenic | 40.0% | |
| GTTAATCTCTACCTACAGCA+TGG | - | chr3.3:90366068-90366087 | MS.gene75310:intron | 40.0% | |
| GTTCCAGTTAAGTGTGAACA+TGG | - | chr3.3:90365624-90365643 | MS.gene75310:intron | 40.0% | |
| GTTGCAATGTGCAACATGTT+GGG | - | chr3.3:90365706-90365725 | MS.gene75310:CDS | 40.0% | |
| TACTCAAGTCCTCCTATTCA+TGG | - | chr3.3:90364982-90365001 | MS.gene75310:intron | 40.0% | |
| TACTTGGGGCAATCATACAA+AGG | - | chr3.3:90363862-90363881 | MS.gene75310:intron | 40.0% | |
| TATACTTGCCAACACCTACT+TGG | - | chr3.3:90363846-90363865 | MS.gene75310:intron | 40.0% | |
| TATTCATGGTGCATCCATTG+TGG | - | chr3.3:90364996-90365015 | MS.gene75310:intron | 40.0% | |
| TCAGCAACAAACAAACGAAC+AGG | + | chr3.3:90364565-90364584 | None:intergenic | 40.0% | |
| TCAGGGATTTGTACAATGAC+TGG | - | chr3.3:90365112-90365131 | MS.gene75310:intron | 40.0% | |
| TCCACACACAAGTTTCTCAA+TGG | + | chr3.3:90364315-90364334 | None:intergenic | 40.0% | |
| TCTTGAAGCTTCCCATTTCT+TGG | - | chr3.3:90364393-90364412 | MS.gene75310:intron | 40.0% | |
| TGATCCAACGCTTGAACAAT+GGG | - | chr3.3:90364190-90364209 | MS.gene75310:intron | 40.0% | |
| TGCAATTGAATAGGTACACC+AGG | - | chr3.3:90365416-90365435 | MS.gene75310:intron | 40.0% | |
| TGGTGTACCTATTCAATTGC+AGG | + | chr3.3:90365417-90365436 | None:intergenic | 40.0% | |
| TGTGTGGACATTATTCACCA+TGG | + | chr3.3:90364425-90364444 | None:intergenic | 40.0% | |
| TTCTACAATAAATGCTCCCC+AGG | - | chr3.3:90364894-90364913 | MS.gene75310:intron | 40.0% | |
| TTGATCCAACGCTTGAACAA+TGG | - | chr3.3:90364189-90364208 | MS.gene75310:intron | 40.0% | |
| TTGCAATGTGCAACATGTTG+GGG | - | chr3.3:90365707-90365726 | MS.gene75310:CDS | 40.0% | |
| TTTGATGCTTTACGTGCTAG+AGG | - | chr3.3:90365189-90365208 | MS.gene75310:intron | 40.0% | |
| TTTGTATGATTGCCCCAAGT+AGG | + | chr3.3:90363863-90363882 | None:intergenic | 40.0% | |
| ! | ACAAAGGTTTTCAACTTGGC+AGG | - | chr3.3:90363878-90363897 | MS.gene75310:intron | 40.0% |
| ! | ACACCCAAGTTGAGCTTAAT+TGG | + | chr3.3:90362535-90362554 | None:intergenic | 40.0% |
| ! | CACCCAAGTTGAGCTTAATT+GGG | + | chr3.3:90362534-90362553 | None:intergenic | 40.0% |
| ! | CCATGGATTATCCCAAGAAA+TGG | + | chr3.3:90364408-90364427 | None:intergenic | 40.0% |
| ! | GTTCGTTTGTTTGTTGCTGA+TGG | - | chr3.3:90364565-90364584 | MS.gene75310:CDS | 40.0% |
| !! | GACTATTGAGTTGAAGGCAA+TGG | - | chr3.3:90365134-90365153 | MS.gene75310:intron | 40.0% |
| !! | TGACTGGACTATTGAGTTGA+AGG | - | chr3.3:90365128-90365147 | MS.gene75310:intron | 40.0% |
| !!! | ACTTGTTTTGCTCCTCTTTC+AGG | - | chr3.3:90365094-90365113 | MS.gene75310:intron | 40.0% |
| !!! | AGCTTATTTTTGGTGCAGAC+AGG | - | chr3.3:90363404-90363423 | MS.gene75310:intron | 40.0% |
| !!! | CTTGTTTTGCTCCTCTTTCA+GGG | - | chr3.3:90365095-90365114 | MS.gene75310:intron | 40.0% |
| !!! | TGTTTTTAGGTCACGCAACA+AGG | - | chr3.3:90363333-90363352 | MS.gene75310:intron | 40.0% |
| AAATCAGCGAGCCCAACAAT+TGG | + | chr3.3:90363367-90363386 | None:intergenic | 45.0% | |
| AACAGGGTTACCACTGTTCA+AGG | - | chr3.3:90363652-90363671 | MS.gene75310:CDS | 45.0% | |
| AAGTCCTGTAAGGAACAAGG+AGG | + | chr3.3:90364096-90364115 | None:intergenic | 45.0% | |
| AATGGCCTGTGATACTTACC+AGG | - | chr3.3:90363160-90363179 | MS.gene75310:intron | 45.0% | |
| ACAGGACTTCTTGAGGATCT+TGG | - | chr3.3:90364107-90364126 | MS.gene75310:CDS | 45.0% | |
| ACCACTGTTCAAGGCTTATC+TGG | - | chr3.3:90363661-90363680 | MS.gene75310:CDS | 45.0% | |
| ACCAGATAAGCCTTGAACAG+TGG | + | chr3.3:90363665-90363684 | None:intergenic | 45.0% | |
| ACCCTGTTCTCTTGAATAGC+AGG | + | chr3.3:90363640-90363659 | None:intergenic | 45.0% | |
| ACCTTCCTGGTAAGTATCAC+AGG | + | chr3.3:90363168-90363187 | None:intergenic | 45.0% | |
| ACGAACAAGATGAGCGAAGA+CGG | + | chr3.3:90362034-90362053 | None:intergenic | 45.0% | |
| AGTCCTGTAAGGAACAAGGA+GGG | + | chr3.3:90364095-90364114 | None:intergenic | 45.0% | |
| ATAACTGAGCTAAGCTCACG+GGG | + | chr3.3:90363517-90363536 | None:intergenic | 45.0% | |
| ATATGTCCAAGTCCAGCCAA+GGG | + | chr3.3:90365066-90365085 | None:intergenic | 45.0% | |
| ATCTGCATCTAGACTTCCAC+TGG | + | chr3.3:90364536-90364555 | None:intergenic | 45.0% | |
| ATGCTTTACGTGCTAGAGGT+TGG | - | chr3.3:90365193-90365212 | MS.gene75310:intron | 45.0% | |
| ATGGATGCACCATGAATAGG+AGG | + | chr3.3:90364994-90365013 | None:intergenic | 45.0% | |
| CATAACTGAGCTAAGCTCAC+GGG | + | chr3.3:90363518-90363537 | None:intergenic | 45.0% | |
| CCAGAGTTATGCGAAGAACA+TGG | - | chr3.3:90364606-90364625 | MS.gene75310:intron | 45.0% | |
| CCATGTTCTTCGCATAACTC+TGG | + | chr3.3:90364609-90364628 | None:intergenic | 45.0% | |
| CCCTGCTATTCAAGAGAACA+GGG | - | chr3.3:90363636-90363655 | MS.gene75310:CDS | 45.0% | |
| CCCTGTTCTCTTGAATAGCA+GGG | + | chr3.3:90363639-90363658 | None:intergenic | 45.0% | |
| CCTCACAACATCCAACACAA+GGG | + | chr3.3:90363195-90363214 | None:intergenic | 45.0% | |
| CTCACAACATCCAACACAAG+GGG | + | chr3.3:90363194-90363213 | None:intergenic | 45.0% | |
| GAAGACGGAATCAGAAGAAG+CGG | + | chr3.3:90362019-90362038 | None:intergenic | 45.0% | |
| GAATAGGTACACCAGGTGAT+TGG | - | chr3.3:90365423-90365442 | MS.gene75310:intron | 45.0% | |
| GATCCTCAAGAAGTCCTGTA+AGG | + | chr3.3:90364106-90364125 | None:intergenic | 45.0% | |
| GCACCATGTTCACACTTAAC+TGG | + | chr3.3:90365630-90365649 | None:intergenic | 45.0% | |
| GCATAACTGAGCTAAGCTCA+CGG | + | chr3.3:90363519-90363538 | None:intergenic | 45.0% | |
| GCGAAGAACATGGGTCTTTA+TGG | - | chr3.3:90364616-90364635 | MS.gene75310:intron | 45.0% | |
| GGTCTTTATGGTGAACGTGT+TGG | - | chr3.3:90364628-90364647 | MS.gene75310:intron | 45.0% | |
| GTACAGAAAGGACAAGCCAA+AGG | + | chr3.3:90365244-90365263 | None:intergenic | 45.0% | |
| GTATTGCATCAGCCAGATGT+GGG | + | chr3.3:90366218-90366237 | None:intergenic | 45.0% | |
| GTTCAAGGCTTATCTGGTAC+TGG | - | chr3.3:90363667-90363686 | MS.gene75310:CDS | 45.0% | |
| GTTCCTTACAGGACTTCTTG+AGG | - | chr3.3:90364100-90364119 | MS.gene75310:CDS | 45.0% | |
| TACTTGCCAACACCTACTTG+GGG | - | chr3.3:90363848-90363867 | MS.gene75310:intron | 45.0% | |
| TCACTACCTGTCCTTGAGAA+TGG | + | chr3.3:90365025-90365044 | None:intergenic | 45.0% | |
| TCTCCTGCGAGAATCTTTCA+AGG | - | chr3.3:90365348-90365367 | MS.gene75310:intron | 45.0% | |
| TGCAATGTGCAACATGTTGG+GGG | - | chr3.3:90365708-90365727 | MS.gene75310:CDS | 45.0% | |
| TGTATTGCATCAGCCAGATG+TGG | + | chr3.3:90366219-90366238 | None:intergenic | 45.0% | |
| TGTCTTACCCATCAGATGTC+AGG | + | chr3.3:90365538-90365557 | None:intergenic | 45.0% | |
| ! | ATTGTGCAGGAGGATTAGCA+TGG | - | chr3.3:90366170-90366189 | MS.gene75310:intron | 45.0% |
| ! | CGTTTGTTTGTTGCTGATGG+TGG | - | chr3.3:90364568-90364587 | MS.gene75310:CDS | 45.0% |
| ! | GGTAACTGTCGCTTACAACA+AGG | - | chr3.3:90362501-90362520 | MS.gene75310:intron | 45.0% |
| ! | GTCAAGATGGAAACTTGCTC+AGG | + | chr3.3:90365497-90365516 | None:intergenic | 45.0% |
| !! | GTACTGGTTCGCTAAGAGTT+GGG | - | chr3.3:90363683-90363702 | MS.gene75310:CDS | 45.0% |
| !! | TACTGGTTCGCTAAGAGTTG+GGG | - | chr3.3:90363684-90363703 | MS.gene75310:CDS | 45.0% |
| !! | ATTAGTTAAAAAAATATAAA+GGG | + | chr3.3:90363768-90363787 | None:intergenic | 5.0% |
| !! | TATTAGTTAAAAAAATATAA+AGG | + | chr3.3:90363769-90363788 | None:intergenic | 5.0% |
| !!! | TAAGAATATTTTTTTTTTTT+TGG | + | chr3.3:90363571-90363590 | None:intergenic | 5.0% |
| ACACAAGGGGTTTACCTTCC+TGG | + | chr3.3:90363181-90363200 | None:intergenic | 50.0% | |
| ACACCGAGGATAGGATCTTC+AGG | + | chr3.3:90362060-90362079 | None:intergenic | 50.0% | |
| ACACGAGGGCTTGACTTTCA+AGG | - | chr3.3:90363938-90363957 | MS.gene75310:intron | 50.0% | |
| ACGGAATCAGAAGAAGCGGT+TGG | + | chr3.3:90362015-90362034 | None:intergenic | 50.0% | |
| ACTATGCTCCAGCAACACGA+GGG | - | chr3.3:90363924-90363943 | MS.gene75310:intron | 50.0% | |
| AGTCAGCGGATGTTTCAAGC+AGG | - | chr3.3:90364923-90364942 | MS.gene75310:intron | 50.0% | |
| ATACTTCTGCTTCCCTTGGC+TGG | - | chr3.3:90365051-90365070 | MS.gene75310:intron | 50.0% | |
| CAGCATGGTACGCAAGCTAT+AGG | + | chr3.3:90365652-90365671 | None:intergenic | 50.0% | |
| CATATGTCCAAGTCCAGCCA+AGG | + | chr3.3:90365067-90365086 | None:intergenic | 50.0% | |
| CCCTTGTGTTGGATGTTGTG+AGG | - | chr3.3:90363192-90363211 | MS.gene75310:intron | 50.0% | |
| CTACCTGTCCTTGAGAATGG+CGG | + | chr3.3:90365022-90365041 | None:intergenic | 50.0% | |
| CTCCAAAACAGTCCCACATC+TGG | - | chr3.3:90366203-90366222 | MS.gene75310:CDS | 50.0% | |
| GCATGTGCACATAACCCTAC+TGG | - | chr3.3:90364164-90364183 | MS.gene75310:intron | 50.0% | |
| GCCCTGCTATTCAAGAGAAC+AGG | - | chr3.3:90363635-90363654 | MS.gene75310:CDS | 50.0% | |
| GCCTCACAACATCCAACACA+AGG | + | chr3.3:90363196-90363215 | None:intergenic | 50.0% | |
| GCCTGTGATACTTACCAGGA+AGG | - | chr3.3:90363164-90363183 | MS.gene75310:intron | 50.0% | |
| GCGTTGGATCAACACCAGTA+GGG | + | chr3.3:90364181-90364200 | None:intergenic | 50.0% | |
| GCTCCTGAAGATCCTATCCT+CGG | - | chr3.3:90362054-90362073 | MS.gene75310:intron | 50.0% | |
| GGAAGGTAAACCCCTTGTGT+TGG | - | chr3.3:90363181-90363200 | MS.gene75310:intron | 50.0% | |
| GTCAGCGGATGTTTCAAGCA+GGG | - | chr3.3:90364924-90364943 | MS.gene75310:intron | 50.0% | |
| GTCCTGTAAGGAACAAGGAG+GGG | + | chr3.3:90364094-90364113 | None:intergenic | 50.0% | |
| TACTATGCTCCAGCAACACG+AGG | - | chr3.3:90363923-90363942 | MS.gene75310:intron | 50.0% | |
| TCAGAAGAAGCGGTTGGAGA+AGG | + | chr3.3:90362009-90362028 | None:intergenic | 50.0% | |
| TCCTGTAAGGAACAAGGAGG+GGG | + | chr3.3:90364093-90364112 | None:intergenic | 50.0% | |
| TGATTGCCCCAAGTAGGTGT+TGG | + | chr3.3:90363857-90363876 | None:intergenic | 50.0% | |
| TGCTCCCATTGTTCAAGCGT+TGG | + | chr3.3:90364197-90364216 | None:intergenic | 50.0% | |
| ! | AGCCAGATGTGGGACTGTTT+TGG | + | chr3.3:90366208-90366227 | None:intergenic | 50.0% |
| ! | AGCGTTGGATCAACACCAGT+AGG | + | chr3.3:90364182-90364201 | None:intergenic | 50.0% |
| ! | CGATACGGTTCTGATGCTGA+TGG | - | chr3.3:90362299-90362318 | MS.gene75310:intron | 50.0% |
| ! | GTTCAACAGGGTTTTGCCAG+TGG | - | chr3.3:90364517-90364536 | MS.gene75310:CDS | 50.0% |
| ! | TGTTGGTGCTTACCGAACTG+AGG | - | chr3.3:90362552-90362571 | MS.gene75310:intron | 50.0% |
| !! | ACTGGTTCGCTAAGAGTTGG+GGG | - | chr3.3:90363685-90363704 | MS.gene75310:CDS | 50.0% |
| !! | GGTACTGGTTCGCTAAGAGT+TGG | - | chr3.3:90363682-90363701 | MS.gene75310:CDS | 50.0% |
| !! | TGCTGATGGTGGAGAATTGC+TGG | - | chr3.3:90364579-90364598 | MS.gene75310:CDS | 50.0% |
| AAGTCAAGCCCTCGTGTTGC+TGG | + | chr3.3:90363935-90363954 | None:intergenic | 55.0% | |
| CATTGTGGCCGCCATTCTCA+AGG | - | chr3.3:90365011-90365030 | MS.gene75310:CDS | 55.0% | |
| CTTGAGAATGGCGGCCACAA+TGG | + | chr3.3:90365013-90365032 | None:intergenic | 55.0% | |
| TCCCCCTCCTTGTTCCTTAC+AGG | - | chr3.3:90364089-90364108 | MS.gene75310:CDS | 55.0% | |
| ! | TGCAGGAGGATTAGCATGGC+TGG | - | chr3.3:90366174-90366193 | MS.gene75310:CDS | 55.0% |
| !! | ATCCGCTGACTTGCTGACCT+GGG | + | chr3.3:90364914-90364933 | None:intergenic | 55.0% |
| !! | GATCTTGGTTCTGCCCCATC+TGG | - | chr3.3:90364122-90364141 | MS.gene75310:intron | 55.0% |
| CTGCTTCCCTTGGCTGGACT+TGG | - | chr3.3:90365057-90365076 | MS.gene75310:intron | 60.0% | |
| TCCCCAGGTCAGCAAGTCAG+CGG | - | chr3.3:90364909-90364928 | MS.gene75310:intron | 60.0% | |
| TGGCCGCCATTCTCAAGGAC+AGG | - | chr3.3:90365016-90365035 | MS.gene75310:CDS | 60.0% | |
| !! | CATCCGCTGACTTGCTGACC+TGG | + | chr3.3:90364915-90364934 | None:intergenic | 60.0% |
| !! | TCCGCTGACTTGCTGACCTG+GGG | + | chr3.3:90364913-90364932 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 90361985 | 90366263 | 90361985 | ID=MS.gene75310 |
| chr3.3 | mRNA | 90361985 | 90366263 | 90361985 | ID=MS.gene75310.t1;Parent=MS.gene75310 |
| chr3.3 | exon | 90366171 | 90366263 | 90366171 | ID=MS.gene75310.t1.exon1;Parent=MS.gene75310.t1 |
| chr3.3 | CDS | 90366171 | 90366263 | 90366171 | ID=cds.MS.gene75310.t1;Parent=MS.gene75310.t1 |
| chr3.3 | exon | 90365675 | 90365746 | 90365675 | ID=MS.gene75310.t1.exon2;Parent=MS.gene75310.t1 |
| chr3.3 | CDS | 90365675 | 90365746 | 90365675 | ID=cds.MS.gene75310.t1;Parent=MS.gene75310.t1 |
| chr3.3 | exon | 90365005 | 90365066 | 90365005 | ID=MS.gene75310.t1.exon3;Parent=MS.gene75310.t1 |
| chr3.3 | CDS | 90365005 | 90365066 | 90365005 | ID=cds.MS.gene75310.t1;Parent=MS.gene75310.t1 |
| chr3.3 | exon | 90364823 | 90364906 | 90364823 | ID=MS.gene75310.t1.exon4;Parent=MS.gene75310.t1 |
| chr3.3 | CDS | 90364823 | 90364906 | 90364823 | ID=cds.MS.gene75310.t1;Parent=MS.gene75310.t1 |
| chr3.3 | exon | 90364513 | 90364612 | 90364513 | ID=MS.gene75310.t1.exon5;Parent=MS.gene75310.t1 |
| chr3.3 | CDS | 90364513 | 90364612 | 90364513 | ID=cds.MS.gene75310.t1;Parent=MS.gene75310.t1 |
| chr3.3 | exon | 90364289 | 90364409 | 90364289 | ID=MS.gene75310.t1.exon6;Parent=MS.gene75310.t1 |
| chr3.3 | CDS | 90364289 | 90364409 | 90364289 | ID=cds.MS.gene75310.t1;Parent=MS.gene75310.t1 |
| chr3.3 | exon | 90363974 | 90364137 | 90363974 | ID=MS.gene75310.t1.exon7;Parent=MS.gene75310.t1 |
| chr3.3 | CDS | 90363974 | 90364137 | 90363974 | ID=cds.MS.gene75310.t1;Parent=MS.gene75310.t1 |
| chr3.3 | exon | 90363585 | 90363722 | 90363585 | ID=MS.gene75310.t1.exon8;Parent=MS.gene75310.t1 |
| chr3.3 | CDS | 90363585 | 90363722 | 90363585 | ID=cds.MS.gene75310.t1;Parent=MS.gene75310.t1 |
| chr3.3 | exon | 90363211 | 90363332 | 90363211 | ID=MS.gene75310.t1.exon9;Parent=MS.gene75310.t1 |
| chr3.3 | CDS | 90363211 | 90363332 | 90363211 | ID=cds.MS.gene75310.t1;Parent=MS.gene75310.t1 |
| chr3.3 | exon | 90363038 | 90363132 | 90363038 | ID=MS.gene75310.t1.exon10;Parent=MS.gene75310.t1 |
| chr3.3 | CDS | 90363038 | 90363132 | 90363038 | ID=cds.MS.gene75310.t1;Parent=MS.gene75310.t1 |
| chr3.3 | exon | 90362699 | 90362819 | 90362699 | ID=MS.gene75310.t1.exon11;Parent=MS.gene75310.t1 |
| chr3.3 | CDS | 90362699 | 90362819 | 90362699 | ID=cds.MS.gene75310.t1;Parent=MS.gene75310.t1 |
| chr3.3 | exon | 90361985 | 90362069 | 90361985 | ID=MS.gene75310.t1.exon12;Parent=MS.gene75310.t1 |
| chr3.3 | CDS | 90361985 | 90362069 | 90361985 | ID=cds.MS.gene75310.t1;Parent=MS.gene75310.t1 |
| Gene Sequence |
| Protein sequence |
