Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016248.t1 | RHN46759.1 | 92.7 | 329 | 24 | 0 | 1 | 329 | 38 | 366 | 4.20E-177 | 630.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016248.t1 | Q40316 | 68.4 | 329 | 101 | 2 | 1 | 329 | 1 | 326 | 7.8e-132 | 471.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016248.t1 | A0A396H071 | 92.7 | 329 | 24 | 0 | 1 | 329 | 38 | 366 | 3.0e-177 | 630.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene56554 | MS.gene016248 | PPI |
| MS.gene96808 | MS.gene016248 | PPI |
| MS.gene40148 | MS.gene016248 | PPI |
| MS.gene031525 | MS.gene016248 | PPI |
| MS.gene40154 | MS.gene016248 | PPI |
| MS.gene016248 | MS.gene071398 | PPI |
| MS.gene006771 | MS.gene016248 | PPI |
| MS.gene028567 | MS.gene016248 | PPI |
| MS.gene071401 | MS.gene016248 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016248.t1 | MTR_7g074730 | 92.705 | 329 | 23 | 1 | 1 | 329 | 1 | 328 | 0.0 | 634 |
| MS.gene016248.t1 | MTR_7g074850 | 86.364 | 330 | 43 | 2 | 1 | 329 | 1 | 329 | 0.0 | 587 |
| MS.gene016248.t1 | MTR_7g074820 | 86.061 | 330 | 44 | 2 | 1 | 329 | 1 | 329 | 0.0 | 585 |
| MS.gene016248.t1 | MTR_7g074880 | 79.331 | 329 | 65 | 2 | 1 | 329 | 1 | 326 | 0.0 | 551 |
| MS.gene016248.t1 | MTR_7g074710 | 68.085 | 329 | 102 | 2 | 1 | 329 | 1 | 326 | 1.67e-170 | 476 |
| MS.gene016248.t1 | MTR_7g074870 | 75.610 | 287 | 68 | 1 | 43 | 329 | 4 | 288 | 6.15e-162 | 453 |
| MS.gene016248.t1 | MTR_4g023730 | 51.515 | 330 | 158 | 2 | 1 | 329 | 1 | 329 | 2.12e-113 | 332 |
| MS.gene016248.t1 | MTR_1g022440 | 46.273 | 322 | 169 | 4 | 8 | 329 | 8 | 325 | 1.15e-99 | 297 |
| MS.gene016248.t1 | MTR_1g022445 | 46.177 | 327 | 162 | 5 | 8 | 329 | 8 | 325 | 6.94e-96 | 287 |
| MS.gene016248.t1 | MTR_4g092080 | 40.000 | 335 | 188 | 5 | 1 | 327 | 7 | 336 | 5.98e-79 | 244 |
| MS.gene016248.t1 | MTR_4g081440 | 37.243 | 341 | 189 | 7 | 6 | 329 | 22 | 354 | 1.29e-73 | 231 |
| MS.gene016248.t1 | MTR_4g081440 | 37.243 | 341 | 188 | 8 | 6 | 329 | 18 | 349 | 3.90e-72 | 227 |
| MS.gene016248.t1 | MTR_2g101330 | 37.805 | 328 | 187 | 9 | 7 | 329 | 4 | 319 | 1.88e-66 | 212 |
| MS.gene016248.t1 | MTR_5g056600 | 36.000 | 325 | 194 | 9 | 9 | 329 | 5 | 319 | 1.20e-60 | 197 |
| MS.gene016248.t1 | MTR_8g062110 | 35.843 | 332 | 194 | 8 | 1 | 326 | 1 | 319 | 5.29e-59 | 192 |
| MS.gene016248.t1 | MTR_8g062110 | 35.843 | 332 | 194 | 8 | 1 | 326 | 10 | 328 | 8.29e-59 | 192 |
| MS.gene016248.t1 | MTR_8g062110 | 37.457 | 291 | 168 | 6 | 1 | 287 | 1 | 281 | 2.66e-57 | 187 |
| MS.gene016248.t1 | MTR_8g062440 | 35.542 | 332 | 196 | 8 | 4 | 329 | 3 | 322 | 2.73e-57 | 188 |
| MS.gene016248.t1 | MTR_8g062110 | 37.809 | 283 | 163 | 5 | 1 | 279 | 1 | 274 | 2.95e-57 | 187 |
| MS.gene016248.t1 | MTR_2g013230 | 34.844 | 353 | 193 | 10 | 1 | 329 | 1 | 340 | 1.73e-56 | 187 |
| MS.gene016248.t1 | MTR_3g005210 | 34.251 | 327 | 198 | 8 | 8 | 329 | 6 | 320 | 6.23e-56 | 184 |
| MS.gene016248.t1 | MTR_8g062440 | 35.629 | 334 | 192 | 9 | 4 | 329 | 3 | 321 | 1.38e-55 | 184 |
| MS.gene016248.t1 | MTR_8g062440 | 38.298 | 282 | 157 | 6 | 4 | 279 | 3 | 273 | 1.13e-53 | 179 |
| MS.gene016248.t1 | MTR_4g077130 | 34.615 | 338 | 195 | 11 | 1 | 328 | 1 | 322 | 7.27e-53 | 177 |
| MS.gene016248.t1 | MTR_2g013250 | 34.195 | 348 | 194 | 9 | 3 | 327 | 2 | 337 | 4.50e-52 | 175 |
| MS.gene016248.t1 | MTR_3g031650 | 34.328 | 335 | 187 | 12 | 8 | 329 | 5 | 319 | 1.04e-51 | 174 |
| MS.gene016248.t1 | MTR_3g005170 | 32.822 | 326 | 202 | 9 | 8 | 328 | 10 | 323 | 7.65e-51 | 171 |
| MS.gene016248.t1 | MTR_3g005170 | 35.145 | 276 | 168 | 6 | 8 | 280 | 10 | 277 | 2.27e-50 | 169 |
| MS.gene016248.t1 | MTR_5g072620 | 35.347 | 331 | 189 | 10 | 8 | 329 | 5 | 319 | 3.97e-50 | 169 |
| MS.gene016248.t1 | MTR_2g104960 | 36.196 | 326 | 188 | 14 | 8 | 329 | 20 | 329 | 1.17e-49 | 169 |
| MS.gene016248.t1 | MTR_2g013260 | 35.328 | 351 | 190 | 12 | 1 | 327 | 1 | 338 | 1.05e-48 | 167 |
| MS.gene016248.t1 | MTR_4g077100 | 34.507 | 284 | 174 | 7 | 1 | 280 | 3 | 278 | 6.42e-48 | 162 |
| MS.gene016248.t1 | MTR_4g077100 | 34.507 | 284 | 174 | 7 | 1 | 280 | 3 | 278 | 2.19e-47 | 162 |
| MS.gene016248.t1 | MTR_4g006940 | 33.636 | 330 | 199 | 13 | 4 | 329 | 13 | 326 | 2.88e-46 | 160 |
| MS.gene016248.t1 | MTR_3g031650 | 34.286 | 280 | 163 | 8 | 8 | 279 | 5 | 271 | 2.00e-45 | 156 |
| MS.gene016248.t1 | MTR_4g009040 | 33.129 | 326 | 201 | 9 | 7 | 329 | 12 | 323 | 7.93e-45 | 156 |
| MS.gene016248.t1 | MTR_7g117190 | 32.378 | 349 | 204 | 10 | 3 | 329 | 2 | 340 | 1.67e-44 | 155 |
| MS.gene016248.t1 | MTR_2g013260 | 36.093 | 302 | 161 | 9 | 1 | 279 | 1 | 293 | 2.01e-44 | 154 |
| MS.gene016248.t1 | MTR_4g009040 | 32.628 | 331 | 200 | 10 | 7 | 329 | 12 | 327 | 8.57e-44 | 153 |
| MS.gene016248.t1 | MTR_4g006940 | 35.000 | 280 | 167 | 8 | 4 | 281 | 13 | 279 | 1.00e-43 | 152 |
| MS.gene016248.t1 | MTR_4g006940 | 35.000 | 280 | 167 | 8 | 4 | 281 | 13 | 279 | 1.00e-43 | 152 |
| MS.gene016248.t1 | MTR_2g028620 | 32.749 | 342 | 185 | 14 | 8 | 329 | 10 | 326 | 1.38e-42 | 150 |
| MS.gene016248.t1 | MTR_7g117190 | 33.557 | 298 | 171 | 8 | 3 | 279 | 2 | 293 | 3.12e-40 | 143 |
| MS.gene016248.t1 | MTR_2g028620 | 34.643 | 280 | 164 | 9 | 8 | 279 | 10 | 278 | 1.18e-39 | 142 |
| MS.gene016248.t1 | MTR_4g009690 | 32.722 | 327 | 201 | 10 | 7 | 329 | 12 | 323 | 5.33e-39 | 140 |
| MS.gene016248.t1 | MTR_4g009690 | 32.722 | 327 | 200 | 10 | 7 | 329 | 12 | 322 | 6.50e-39 | 140 |
| MS.gene016248.t1 | MTR_3g005170 | 29.448 | 326 | 182 | 10 | 8 | 328 | 10 | 292 | 1.51e-35 | 130 |
| MS.gene016248.t1 | MTR_2g013230 | 32.016 | 253 | 137 | 9 | 101 | 329 | 9 | 250 | 7.67e-27 | 106 |
| MS.gene016248.t1 | MTR_8g062110 | 31.858 | 226 | 138 | 6 | 106 | 326 | 19 | 233 | 6.92e-26 | 103 |
| MS.gene016248.t1 | MTR_0164s0070 | 37.984 | 129 | 77 | 2 | 7 | 134 | 4 | 130 | 1.55e-25 | 102 |
| MS.gene016248.t1 | MTR_5g029990 | 26.619 | 278 | 170 | 7 | 8 | 276 | 12 | 264 | 5.77e-24 | 99.8 |
| MS.gene016248.t1 | MTR_8g062110 | 33.898 | 177 | 107 | 3 | 106 | 279 | 19 | 188 | 6.46e-24 | 97.1 |
| MS.gene016248.t1 | MTR_6g406250 | 28.571 | 266 | 161 | 10 | 4 | 256 | 51 | 300 | 3.27e-22 | 95.9 |
| MS.gene016248.t1 | MTR_7g074865 | 87.500 | 40 | 5 | 0 | 1 | 40 | 1 | 40 | 6.70e-20 | 82.8 |
| MS.gene016248.t1 | MTR_6g406250 | 29.075 | 227 | 132 | 8 | 4 | 217 | 51 | 261 | 7.73e-20 | 87.8 |
| MS.gene016248.t1 | MTR_2g013260 | 32.669 | 251 | 134 | 11 | 101 | 327 | 28 | 267 | 4.75e-19 | 85.9 |
| MS.gene016248.t1 | MTR_7g117190 | 30.508 | 236 | 134 | 9 | 116 | 329 | 3 | 230 | 1.36e-18 | 83.6 |
| MS.gene016248.t1 | MTR_3g101500 | 27.604 | 192 | 118 | 5 | 7 | 198 | 3 | 173 | 1.70e-12 | 66.2 |
| MS.gene016248.t1 | MTR_0685s0030 | 33.621 | 116 | 74 | 2 | 165 | 280 | 3 | 115 | 6.36e-12 | 62.4 |
| MS.gene016248.t1 | MTR_0685s0030 | 33.621 | 116 | 74 | 2 | 165 | 280 | 3 | 115 | 1.39e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016248.t1 | AT2G45400 | 53.191 | 329 | 147 | 4 | 6 | 329 | 38 | 364 | 7.24e-114 | 334 |
| MS.gene016248.t1 | AT2G45400 | 54.093 | 281 | 123 | 3 | 6 | 281 | 38 | 317 | 1.87e-100 | 299 |
| MS.gene016248.t1 | AT5G42800 | 46.746 | 338 | 158 | 6 | 1 | 329 | 1 | 325 | 3.92e-97 | 292 |
| MS.gene016248.t1 | AT2G45400 | 52.041 | 294 | 134 | 4 | 41 | 329 | 16 | 307 | 4.02e-94 | 282 |
| MS.gene016248.t1 | AT4G35420 | 39.759 | 332 | 186 | 8 | 1 | 329 | 1 | 321 | 8.76e-80 | 246 |
| MS.gene016248.t1 | AT2G45400 | 56.221 | 217 | 90 | 2 | 6 | 217 | 38 | 254 | 2.04e-79 | 243 |
| MS.gene016248.t1 | AT1G61720 | 40.120 | 334 | 187 | 7 | 4 | 329 | 9 | 337 | 1.57e-75 | 236 |
| MS.gene016248.t1 | AT1G68540 | 37.538 | 325 | 189 | 10 | 10 | 329 | 6 | 321 | 8.00e-59 | 192 |
| MS.gene016248.t1 | AT4G27250 | 31.953 | 338 | 207 | 5 | 2 | 321 | 6 | 338 | 2.71e-57 | 189 |
| MS.gene016248.t1 | AT1G09480 | 35.843 | 332 | 200 | 7 | 1 | 329 | 1 | 322 | 3.25e-57 | 188 |
| MS.gene016248.t1 | AT4G27250 | 32.229 | 332 | 204 | 5 | 2 | 321 | 6 | 328 | 4.59e-57 | 188 |
| MS.gene016248.t1 | AT1G09480 | 36.656 | 311 | 185 | 6 | 1 | 308 | 48 | 349 | 7.81e-57 | 188 |
| MS.gene016248.t1 | AT2G02400 | 35.119 | 336 | 189 | 11 | 4 | 329 | 2 | 318 | 3.98e-56 | 185 |
| MS.gene016248.t1 | AT1G09490 | 37.282 | 287 | 169 | 6 | 1 | 284 | 1 | 279 | 8.44e-56 | 184 |
| MS.gene016248.t1 | AT5G58490 | 36.095 | 338 | 177 | 10 | 8 | 329 | 9 | 323 | 1.47e-55 | 184 |
| MS.gene016248.t1 | AT1G09510 | 36.778 | 329 | 195 | 8 | 1 | 326 | 1 | 319 | 7.18e-55 | 182 |
| MS.gene016248.t1 | AT1G25460 | 35.494 | 324 | 195 | 7 | 10 | 329 | 6 | 319 | 3.30e-54 | 180 |
| MS.gene016248.t1 | AT1G51410 | 32.727 | 330 | 209 | 7 | 3 | 329 | 4 | 323 | 1.38e-53 | 179 |
| MS.gene016248.t1 | AT5G19440 | 35.347 | 331 | 196 | 10 | 4 | 328 | 5 | 323 | 7.03e-53 | 177 |
| MS.gene016248.t1 | AT1G76470 | 36.792 | 318 | 191 | 7 | 5 | 320 | 4 | 313 | 2.19e-52 | 176 |
| MS.gene016248.t1 | AT1G66800 | 37.363 | 273 | 161 | 7 | 4 | 275 | 3 | 266 | 1.57e-51 | 173 |
| MS.gene016248.t1 | AT1G09500 | 35.689 | 283 | 170 | 6 | 1 | 279 | 1 | 275 | 9.60e-51 | 170 |
| MS.gene016248.t1 | AT1G09500 | 35.417 | 288 | 174 | 6 | 1 | 284 | 1 | 280 | 2.10e-50 | 170 |
| MS.gene016248.t1 | AT1G15950 | 36.196 | 326 | 188 | 11 | 8 | 329 | 13 | 322 | 2.69e-50 | 171 |
| MS.gene016248.t1 | AT1G15950 | 36.196 | 326 | 188 | 11 | 8 | 329 | 13 | 322 | 2.69e-50 | 171 |
| MS.gene016248.t1 | AT1G15950 | 36.306 | 314 | 181 | 10 | 8 | 317 | 13 | 311 | 3.16e-48 | 165 |
| MS.gene016248.t1 | AT1G15950 | 38.849 | 278 | 151 | 10 | 8 | 281 | 13 | 275 | 1.08e-46 | 159 |
| MS.gene016248.t1 | AT2G33590 | 33.642 | 324 | 191 | 11 | 5 | 321 | 6 | 312 | 1.08e-46 | 160 |
| MS.gene016248.t1 | AT1G15950 | 38.710 | 279 | 152 | 10 | 8 | 282 | 13 | 276 | 1.44e-46 | 159 |
| MS.gene016248.t1 | AT1G15950 | 38.710 | 279 | 152 | 10 | 8 | 282 | 13 | 276 | 2.01e-46 | 159 |
| MS.gene016248.t1 | AT1G80820 | 35.061 | 328 | 189 | 14 | 8 | 329 | 8 | 317 | 5.96e-45 | 156 |
| MS.gene016248.t1 | AT2G33600 | 35.938 | 320 | 189 | 11 | 5 | 321 | 6 | 312 | 2.74e-43 | 152 |
| MS.gene016248.t1 | AT1G80820 | 36.331 | 278 | 158 | 9 | 8 | 281 | 8 | 270 | 1.01e-41 | 146 |
| MS.gene016248.t1 | AT1G09490 | 34.387 | 253 | 156 | 5 | 35 | 284 | 3 | 248 | 3.86e-41 | 145 |
| MS.gene016248.t1 | AT1G09500 | 33.200 | 250 | 156 | 6 | 39 | 284 | 4 | 246 | 1.09e-35 | 131 |
| MS.gene016248.t1 | AT1G68540 | 34.842 | 221 | 133 | 7 | 113 | 329 | 1 | 214 | 7.59e-31 | 116 |
| MS.gene016248.t1 | AT2G23910 | 27.451 | 306 | 200 | 10 | 9 | 306 | 11 | 302 | 1.48e-29 | 115 |
| MS.gene016248.t1 | AT2G23910 | 26.978 | 278 | 185 | 8 | 9 | 282 | 11 | 274 | 4.72e-27 | 107 |
| MS.gene016248.t1 | AT2G23910 | 26.812 | 276 | 184 | 8 | 9 | 280 | 11 | 272 | 6.70e-27 | 107 |
| MS.gene016248.t1 | AT4G30470 | 26.144 | 306 | 201 | 10 | 9 | 305 | 11 | 300 | 1.75e-24 | 101 |
| MS.gene016248.t1 | AT1G15950 | 33.043 | 230 | 137 | 10 | 106 | 329 | 6 | 224 | 1.04e-22 | 95.5 |
| MS.gene016248.t1 | AT5G14700 | 28.421 | 285 | 162 | 11 | 2 | 264 | 49 | 313 | 5.30e-22 | 95.5 |
| MS.gene016248.t1 | AT2G23910 | 26.038 | 265 | 176 | 9 | 50 | 306 | 16 | 268 | 3.70e-19 | 86.3 |
| MS.gene016248.t1 | AT5G14700 | 28.704 | 216 | 120 | 8 | 2 | 198 | 49 | 249 | 4.74e-19 | 86.3 |
| MS.gene016248.t1 | AT4G33360 | 26.736 | 288 | 167 | 10 | 7 | 280 | 2 | 259 | 2.26e-17 | 82.0 |
| MS.gene016248.t1 | AT4G33360 | 27.083 | 288 | 166 | 10 | 7 | 280 | 14 | 271 | 2.66e-17 | 82.0 |
| MS.gene016248.t1 | AT4G33360 | 26.736 | 288 | 167 | 10 | 7 | 280 | 14 | 271 | 2.76e-17 | 81.3 |
Find 62 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGCTGCATTGAAACTTTC+TGG | 0.117961 | 7.1:+28210487 | None:intergenic |
| AATTCACTAGCTTTCTTATT+TGG | 0.119579 | 7.1:-28210067 | MS.gene016248:intron |
| GAGAAAGCTGTTCTTGAATT+TGG | 0.151014 | 7.1:-28210178 | MS.gene016248:CDS |
| TTCATATTCTAGAGAGCTTA+TGG | 0.191999 | 7.1:-28208536 | MS.gene016248:intron |
| GAGCAATTGTACCTCCCTTT+TGG | 0.241092 | 7.1:+28208737 | None:intergenic |
| GGTAGCTAACATCTTTCTTT+TGG | 0.266690 | 7.1:+28210569 | None:intergenic |
| CTTAGAACTTTGAAACCTTT+TGG | 0.267896 | 7.1:-28210232 | MS.gene016248:CDS |
| AGAGAGCTTATGGGAGTTAA+AGG | 0.273617 | 7.1:-28208526 | MS.gene016248:CDS |
| TTCATTTGTCCTAAGCTTCC+TGG | 0.274323 | 7.1:-28210100 | MS.gene016248:CDS |
| ACTGGAGGTACAGGGTTTAT+TGG | 0.300052 | 7.1:-28211982 | MS.gene016248:CDS |
| AGAACCATTGATGGAGCATT+AGG | 0.319772 | 7.1:-28210385 | MS.gene016248:CDS |
| ATGTAATGGATGAAAGTTAT+TGG | 0.353449 | 7.1:-28210270 | MS.gene016248:CDS |
| GAAGTTAAATGTGGAAGCTT+AGG | 0.375861 | 7.1:+28208502 | None:intergenic |
| ATTTGGAGAACAACATGGTT+TGG | 0.377334 | 7.1:-28210161 | MS.gene016248:CDS |
| AATTGAATGTTGCAAGGAAA+AGG | 0.383505 | 7.1:-28208416 | MS.gene016248:CDS |
| GTACAGGGTTTATTGGTTCA+TGG | 0.397157 | 7.1:-28211975 | MS.gene016248:CDS |
| TCATATTCTAGAGAGCTTAT+GGG | 0.397986 | 7.1:-28208535 | MS.gene016248:intron |
| TTGCTGCATTGAAACTTTCT+GGG | 0.400104 | 7.1:+28210488 | None:intergenic |
| TCGTTCTCTTCAAAATCAAT+TGG | 0.419138 | 7.1:+28210430 | None:intergenic |
| CAAGTTCATGTATAGCTTTG+AGG | 0.424452 | 7.1:-28208455 | MS.gene016248:CDS |
| AAAGGAAGAGTTTGTGTGAC+TGG | 0.438296 | 7.1:-28212000 | MS.gene016248:CDS |
| CTTGAACATCCTAATCCAAA+AGG | 0.439060 | 7.1:-28208752 | MS.gene016248:CDS |
| GTTTGTGTGACTGGAGGTAC+AGG | 0.443705 | 7.1:-28211991 | MS.gene016248:CDS |
| TCATCAATAGTTGCAATGAA+TGG | 0.444162 | 7.1:+28208713 | None:intergenic |
| CGTCATCAACATGCACCATA+TGG | 0.451162 | 7.1:+28208798 | None:intergenic |
| AATTCCTAATGCTCCATCAA+TGG | 0.462695 | 7.1:+28210381 | None:intergenic |
| AGTTTCAATGCAGCAATTGA+AGG | 0.465129 | 7.1:-28210481 | MS.gene016248:CDS |
| GGCAGCCTCTCGTCTCCATA+TGG | 0.466564 | 7.1:-28208813 | MS.gene016248:CDS |
| TAACAGCGTAACCATCTTCA+AGG | 0.473218 | 7.1:+28211938 | None:intergenic |
| TAAACTGAGCCAGGAAGCTT+AGG | 0.474959 | 7.1:+28210091 | None:intergenic |
| TCAAAGAAACTGATGGATGC+TGG | 0.475623 | 7.1:-28208481 | MS.gene016248:CDS |
| ATCAAGAGACTCCTTGAAGA+TGG | 0.485072 | 7.1:-28211949 | MS.gene016248:CDS |
| TAGCTTTGAGGAAATGTTTG+AGG | 0.486426 | 7.1:-28208443 | MS.gene016248:CDS |
| AGACAAAGAAGAAGATGTAA+TGG | 0.491149 | 7.1:-28210284 | MS.gene016248:CDS |
| ATTGAATGTTGCAAGGAAAA+GGG | 0.495429 | 7.1:-28208415 | MS.gene016248:CDS |
| GCAGCAATTGAAGGGTGCAT+TGG | 0.498418 | 7.1:-28210472 | MS.gene016248:CDS |
| AGCTTTGAGGAAATGTTTGA+GGG | 0.501932 | 7.1:-28208442 | MS.gene016248:CDS |
| AGGAAGCTTAGGACAAATGA+AGG | 0.508649 | 7.1:+28210102 | None:intergenic |
| AAGAGTGTAGTAATGGAAGA+AGG | 0.524348 | 7.1:-28212024 | None:intergenic |
| AGTGAATTATAAACTGAGCC+AGG | 0.528708 | 7.1:+28210082 | None:intergenic |
| TTTAACTTCAAAGAAACTGA+TGG | 0.529224 | 7.1:-28208488 | MS.gene016248:CDS |
| AAGGGTCCAACAACAAAACT+TGG | 0.536983 | 7.1:+28210121 | None:intergenic |
| ACAGCATATGACCAACCAAA+AGG | 0.537340 | 7.1:+28210217 | None:intergenic |
| CTTGAATTTGGAGAACAACA+TGG | 0.539504 | 7.1:-28210166 | MS.gene016248:CDS |
| TTGAACATCCTAATCCAAAA+GGG | 0.565903 | 7.1:-28208751 | MS.gene016248:CDS |
| GTTTCAATGCAGCAATTGAA+GGG | 0.573950 | 7.1:-28210480 | MS.gene016248:CDS |
| TGTAGAACTCACTTGGATGT+TGG | 0.581215 | 7.1:+28208647 | None:intergenic |
| TGATATTGACAATAGTCCAT+TGG | 0.582137 | 7.1:-28208834 | MS.gene016248:CDS |
| ACCACTGTTAGATCTAATCC+AGG | 0.585583 | 7.1:-28211913 | MS.gene016248:intron |
| GTAGTAATGGAAGAAGGGAA+AGG | 0.589604 | 7.1:-28212018 | None:intergenic |
| TGGAGACGAGAGGCTGCCAA+TGG | 0.597283 | 7.1:+28208818 | None:intergenic |
| AGTTTCTTTGAAGTTAAATG+TGG | 0.603651 | 7.1:+28208493 | None:intergenic |
| GGGCGCAATTGAATGTTGCA+AGG | 0.611585 | 7.1:-28208422 | MS.gene016248:CDS |
| AGAGTGTAGTAATGGAAGAA+GGG | 0.620327 | 7.1:-28212023 | None:intergenic |
| TTTGTGTGACTGGAGGTACA+GGG | 0.633409 | 7.1:-28211990 | MS.gene016248:CDS |
| AACATCCTAATCCAAAAGGG+AGG | 0.662110 | 7.1:-28208748 | MS.gene016248:CDS |
| AATCAATTGGAGTAGCTGTG+TGG | 0.667434 | 7.1:+28210443 | None:intergenic |
| GGAAGCTTAGGACAAATGAA+GGG | 0.696483 | 7.1:+28210103 | None:intergenic |
| ATGCACCATATGGAGACGAG+AGG | 0.702189 | 7.1:+28208808 | None:intergenic |
| GGAAGAGTTTGTGTGACTGG+AGG | 0.702220 | 7.1:-28211997 | MS.gene016248:CDS |
| ATGCATTTGGAAGATTTGTG+AGG | 0.707774 | 7.1:+28210548 | None:intergenic |
| ACCTGGATTAGATCTAACAG+TGG | 0.730654 | 7.1:+28211912 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAATAAACTCTTAT+AGG | + | chr7.1:28211497-28211516 | None:intergenic | 10.0% |
| !! | AAAAATAAAATAAAAAACTG+AGG | - | chr7.1:28209488-28209507 | MS.gene016248:intron | 10.0% |
| !! | ACTATATATAAAGAAAATAA+GGG | + | chr7.1:28209372-28209391 | None:intergenic | 10.0% |
| !! | AGATAAAAAAGTTAATAATA+AGG | - | chr7.1:28209537-28209556 | MS.gene016248:intron | 10.0% |
| !! | TACTATATATAAAGAAAATA+AGG | + | chr7.1:28209373-28209392 | None:intergenic | 10.0% |
| !! | TAGAAAATGATTTAAATTAA+GGG | - | chr7.1:28209609-28209628 | MS.gene016248:intron | 10.0% |
| !!! | AAATATACTACAATTTTTTT+AGG | + | chr7.1:28211426-28211445 | None:intergenic | 10.0% |
| !!! | AATACAAAATATTTTAACAA+AGG | - | chr7.1:28208696-28208715 | MS.gene016248:CDS | 10.0% |
| !!! | AATATACTACAATTTTTTTA+GGG | + | chr7.1:28211425-28211444 | None:intergenic | 10.0% |
| !!! | ATAAGAGTTTATTTTTTTTT+GGG | - | chr7.1:28211497-28211516 | MS.gene016248:intron | 10.0% |
| !!! | ATTTTATACAAAAAGTTTAA+AGG | - | chr7.1:28211022-28211041 | MS.gene016248:intron | 10.0% |
| !!! | TAGTTTATTTTTTTCAAAAA+GGG | + | chr7.1:28208534-28208553 | None:intergenic | 10.0% |
| !!! | TATAAGAGTTTATTTTTTTT+TGG | - | chr7.1:28211496-28211515 | MS.gene016248:intron | 10.0% |
| !!! | TTAGTTTATTTTTTTCAAAA+AGG | + | chr7.1:28208535-28208554 | None:intergenic | 10.0% |
| !!! | TTTTTATCTTATTTTTTTCT+AGG | + | chr7.1:28209526-28209545 | None:intergenic | 10.0% |
| !! | AAAATCATGTATGTAAATAA+AGG | + | chr7.1:28211234-28211253 | None:intergenic | 15.0% |
| !! | AACAAAAATGACATATAATT+TGG | + | chr7.1:28209752-28209771 | None:intergenic | 15.0% |
| !! | AATTAATGAAAATTAACAAG+TGG | - | chr7.1:28211543-28211562 | MS.gene016248:intron | 15.0% |
| !! | AATTTAAATGAATGACAAAA+TGG | - | chr7.1:28211150-28211169 | MS.gene016248:intron | 15.0% |
| !! | ATGAAAATACAAAAATTTGA+TGG | + | chr7.1:28208563-28208582 | None:intergenic | 15.0% |
| !! | ATTTAGTTAAGTTATTAACA+TGG | + | chr7.1:28211816-28211835 | None:intergenic | 15.0% |
| !! | CTATATATAAAGAAAATAAG+GGG | + | chr7.1:28209371-28209390 | None:intergenic | 15.0% |
| !! | GTAGAAAATGATTTAAATTA+AGG | - | chr7.1:28209608-28209627 | MS.gene016248:intron | 15.0% |
| !!! | AGTTTATTTTTTTCAAAAAG+GGG | + | chr7.1:28208533-28208552 | None:intergenic | 15.0% |
| !!! | ATATACTACAATTTTTTTAG+GGG | + | chr7.1:28211424-28211443 | None:intergenic | 15.0% |
| !!! | ATGTAAATTTTAACCTTTAA+CGG | + | chr7.1:28209721-28209740 | None:intergenic | 15.0% |
| !!! | ATTTTATATAAGGGTATAAT+TGG | - | chr7.1:28209310-28209329 | MS.gene016248:intron | 15.0% |
| !!! | ATTTTTTTTTCTTTTCTCAA+AGG | - | chr7.1:28210675-28210694 | MS.gene016248:intron | 15.0% |
| !!! | TACACATATTTATTCTAAAA+TGG | + | chr7.1:28209116-28209135 | None:intergenic | 15.0% |
| !!! | TTTGTATTCAAAATTTTACT+AGG | + | chr7.1:28210478-28210497 | None:intergenic | 15.0% |
| !! | AATAAGATTATATCAAAGAC+AGG | + | chr7.1:28208789-28208808 | None:intergenic | 20.0% |
| !! | ACCAAAATTATGTAAATAGA+AGG | - | chr7.1:28209825-28209844 | MS.gene016248:intron | 20.0% |
| !! | ATAAGATTATATCAAAGACA+GGG | + | chr7.1:28208788-28208807 | None:intergenic | 20.0% |
| !! | CTATAATAATGTAATATCGT+TGG | + | chr7.1:28209287-28209306 | None:intergenic | 20.0% |
| !! | GATATATACTAATAAATGTG+AGG | + | chr7.1:28210925-28210944 | None:intergenic | 20.0% |
| !! | TAATAAAAAGTCAACTTCAA+CGG | - | chr7.1:28211373-28211392 | MS.gene016248:intron | 20.0% |
| !! | TATACAAAAAGTTTAAAGGA+AGG | - | chr7.1:28211026-28211045 | MS.gene016248:intron | 20.0% |
| !! | TGTCTTTGATATAATCTTAT+TGG | - | chr7.1:28208788-28208807 | MS.gene016248:CDS | 20.0% |
| !! | TTCAATAAATACATATGACA+TGG | - | chr7.1:28210773-28210792 | MS.gene016248:intron | 20.0% |
| !!! | AATTTTGACATAGTTTTTGA+AGG | + | chr7.1:28211203-28211222 | None:intergenic | 20.0% |
| !!! | ATCTTATTTTTTTCTAGGTT+AGG | + | chr7.1:28209521-28209540 | None:intergenic | 20.0% |
| !!! | ATGTTGGTATTTTAAATGTA+GGG | + | chr7.1:28211757-28211776 | None:intergenic | 20.0% |
| !!! | ATTTTGACATAGTTTTTGAA+GGG | + | chr7.1:28211202-28211221 | None:intergenic | 20.0% |
| !!! | CAACTAGTACATTTTATTAA+TGG | - | chr7.1:28210698-28210717 | MS.gene016248:intron | 20.0% |
| !!! | CTTTTTTTCAATTTTTCTCT+CGG | - | chr7.1:28208914-28208933 | MS.gene016248:intron | 20.0% |
| !!! | TATACAACTATTTTTTTGAC+TGG | + | chr7.1:28211456-28211475 | None:intergenic | 20.0% |
| ! | AGAATTATGTTTATGCATCA+AGG | - | chr7.1:28209662-28209681 | MS.gene016248:intron | 25.0% |
| ! | AGTTTAAAGGAAGGTAAAAT+TGG | - | chr7.1:28211035-28211054 | MS.gene016248:intron | 25.0% |
| ! | ATATGTCTAACTTATTTCAC+TGG | - | chr7.1:28208861-28208880 | MS.gene016248:intron | 25.0% |
| ! | ATTAATATGTAGAACTCACT+TGG | + | chr7.1:28211780-28211799 | None:intergenic | 25.0% |
| ! | TTAAGTTATTAACATGGAGA+AGG | + | chr7.1:28211810-28211829 | None:intergenic | 25.0% |
| ! | TTAATTGATCAACAACAACA+TGG | - | chr7.1:28211331-28211350 | MS.gene016248:intron | 25.0% |
| !! | AAAGAAAATAAGGGGTTTTT+GGG | + | chr7.1:28209363-28209382 | None:intergenic | 25.0% |
| !! | AGCAATGAATGTTTAAAACA+CGG | + | chr7.1:28210594-28210613 | None:intergenic | 25.0% |
| !! | CTATTTAAGATTGTGACATT+CGG | - | chr7.1:28208943-28208962 | MS.gene016248:intron | 25.0% |
| !! | GCCTTCTATTTACATAATTT+TGG | + | chr7.1:28209829-28209848 | None:intergenic | 25.0% |
| !! | GTATTCAAAATTTTACTAGG+TGG | + | chr7.1:28210475-28210494 | None:intergenic | 25.0% |
| !! | TAAAGAAAATAAGGGGTTTT+TGG | + | chr7.1:28209364-28209383 | None:intergenic | 25.0% |
| !! | TCTTCTACTTCTAATTTTGT+TGG | + | chr7.1:28209163-28209182 | None:intergenic | 25.0% |
| !! | TTTAACTTCAAAGAAACTGA+TGG | - | chr7.1:28211929-28211948 | MS.gene016248:CDS | 25.0% |
| !!! | AATATTTTAACAAAGGACCT+AGG | - | chr7.1:28208703-28208722 | MS.gene016248:CDS | 25.0% |
| !!! | AATTCACTAGCTTTCTTATT+TGG | - | chr7.1:28210350-28210369 | MS.gene016248:CDS | 25.0% |
| !!! | ACCATGTGATTTTAATACAA+CGG | - | chr7.1:28210510-28210529 | MS.gene016248:CDS | 25.0% |
| !!! | AGTTTCTTTGAAGTTAAATG+TGG | + | chr7.1:28211927-28211946 | None:intergenic | 25.0% |
| !!! | ATATTTTAACAAAGGACCTA+GGG | - | chr7.1:28208704-28208723 | MS.gene016248:CDS | 25.0% |
| !!! | ATGTAATGGATGAAAGTTAT+TGG | - | chr7.1:28210147-28210166 | MS.gene016248:CDS | 25.0% |
| !!! | GATGTTGGTATTTTAAATGT+AGG | + | chr7.1:28211758-28211777 | None:intergenic | 25.0% |
| !!! | TATTTTAAATGTAGGGTACT+TGG | + | chr7.1:28211750-28211769 | None:intergenic | 25.0% |
| !!! | TGTTGCTTTTCAAAGAATTT+TGG | + | chr7.1:28210898-28210917 | None:intergenic | 25.0% |
| !!! | TGTTTTAAACATTCATTGCT+TGG | - | chr7.1:28210594-28210613 | MS.gene016248:intron | 25.0% |
| !!! | TTTTGACATAGTTTTTGAAG+GGG | + | chr7.1:28211201-28211220 | None:intergenic | 25.0% |
| AAAGATTAAGCAAACCACAA+AGG | - | chr7.1:28209191-28209210 | MS.gene016248:intron | 30.0% | |
| AAATACCTTATATGTACTCG+TGG | - | chr7.1:28210843-28210862 | MS.gene016248:intron | 30.0% | |
| AAATATTCCTCTAACTAAGC+CGG | - | chr7.1:28209563-28209582 | MS.gene016248:intron | 30.0% | |
| AATAGAAAAGTCCTCTGAAT+AGG | - | chr7.1:28209006-28209025 | MS.gene016248:intron | 30.0% | |
| AATTGAATGTTGCAAGGAAA+AGG | - | chr7.1:28212001-28212020 | MS.gene016248:CDS | 30.0% | |
| ACCGTTGTATTAAAATCACA+TGG | + | chr7.1:28210514-28210533 | None:intergenic | 30.0% | |
| AGACAAAGAAGAAGATGTAA+TGG | - | chr7.1:28210133-28210152 | MS.gene016248:CDS | 30.0% | |
| ATCAACACTATCGTTATGAT+GGG | - | chr7.1:28210948-28210967 | MS.gene016248:intron | 30.0% | |
| ATTGAATGTTGCAAGGAAAA+GGG | - | chr7.1:28212002-28212021 | MS.gene016248:CDS | 30.0% | |
| TATCAACACTATCGTTATGA+TGG | - | chr7.1:28210947-28210966 | MS.gene016248:intron | 30.0% | |
| TCATCAATAGTTGCAATGAA+TGG | + | chr7.1:28211707-28211726 | None:intergenic | 30.0% | |
| TCGTTCTCTTCAAAATCAAT+TGG | + | chr7.1:28209990-28210009 | None:intergenic | 30.0% | |
| TGATATTGACAATAGTCCAT+TGG | - | chr7.1:28211583-28211602 | MS.gene016248:intron | 30.0% | |
| TGATTAAAACCTCGTGAAAA+TGG | - | chr7.1:28211279-28211298 | MS.gene016248:intron | 30.0% | |
| TGTAGTGTACACTAAGAATA+AGG | - | chr7.1:28209132-28209151 | MS.gene016248:intron | 30.0% | |
| TTGAACATCCTAATCCAAAA+GGG | - | chr7.1:28211666-28211685 | MS.gene016248:intron | 30.0% | |
| ! | AGTGTGTCAAACACTAATTT+TGG | - | chr7.1:28208812-28208831 | MS.gene016248:CDS | 30.0% |
| ! | GAATGTTTAAAACACGGATT+TGG | + | chr7.1:28210588-28210607 | None:intergenic | 30.0% |
| ! | TATTCAGAGGACTTTTCTAT+TGG | + | chr7.1:28209007-28209026 | None:intergenic | 30.0% |
| ! | TCATATTCTAGAGAGCTTAT+GGG | - | chr7.1:28211882-28211901 | MS.gene016248:intron | 30.0% |
| ! | TTCATATTCTAGAGAGCTTA+TGG | - | chr7.1:28211881-28211900 | MS.gene016248:intron | 30.0% |
| !!! | ACATGGAATTTTTTTGCATG+TGG | - | chr7.1:28210790-28210809 | MS.gene016248:intron | 30.0% |
| !!! | ACTATTTTTTTGACTGGACT+TGG | + | chr7.1:28211450-28211469 | None:intergenic | 30.0% |
| !!! | CTAATACCAAGTTTTGTTGT+TGG | - | chr7.1:28210290-28210309 | MS.gene016248:CDS | 30.0% |
| !!! | CTTAGAACTTTGAAACCTTT+TGG | - | chr7.1:28210185-28210204 | MS.gene016248:CDS | 30.0% |
| AATTCCTAATGCTCCATCAA+TGG | + | chr7.1:28210039-28210058 | None:intergenic | 35.0% | |
| AGTGAATTATAAACTGAGCC+AGG | + | chr7.1:28210338-28210357 | None:intergenic | 35.0% | |
| AGTTTCAATGCAGCAATTGA+AGG | - | chr7.1:28209936-28209955 | MS.gene016248:intron | 35.0% | |
| ATGCATTTGGAAGATTTGTG+AGG | + | chr7.1:28209872-28209891 | None:intergenic | 35.0% | |
| ATTGCTGCATTGAAACTTTC+TGG | + | chr7.1:28209933-28209952 | None:intergenic | 35.0% | |
| ATTTGGAGAACAACATGGTT+TGG | - | chr7.1:28210256-28210275 | MS.gene016248:CDS | 35.0% | |
| CTTGAACATCCTAATCCAAA+AGG | - | chr7.1:28211665-28211684 | MS.gene016248:intron | 35.0% | |
| CTTGAATTTGGAGAACAACA+TGG | - | chr7.1:28210251-28210270 | MS.gene016248:CDS | 35.0% | |
| GAAGTTAAATGTGGAAGCTT+AGG | + | chr7.1:28211918-28211937 | None:intergenic | 35.0% | |
| GAGAAAGCTGTTCTTGAATT+TGG | - | chr7.1:28210239-28210258 | MS.gene016248:CDS | 35.0% | |
| GTGACAAAAAGAACCATTGA+TGG | - | chr7.1:28210023-28210042 | MS.gene016248:intron | 35.0% | |
| GTTTCAATGCAGCAATTGAA+GGG | - | chr7.1:28209937-28209956 | MS.gene016248:intron | 35.0% | |
| TTAAGATTGTGACATTCGGT+TGG | - | chr7.1:28208947-28208966 | MS.gene016248:intron | 35.0% | |
| TTGCTGCATTGAAACTTTCT+GGG | + | chr7.1:28209932-28209951 | None:intergenic | 35.0% | |
| ! | AAAGAACATCCATTTTCACG+AGG | + | chr7.1:28211291-28211310 | None:intergenic | 35.0% |
| ! | CAAGTTCATGTATAGCTTTG+AGG | - | chr7.1:28211962-28211981 | MS.gene016248:CDS | 35.0% |
| ! | CTTTTTGTCACTATTTCCTC+TGG | + | chr7.1:28210014-28210033 | None:intergenic | 35.0% |
| ! | GGTAGCTAACATCTTTCTTT+TGG | + | chr7.1:28209851-28209870 | None:intergenic | 35.0% |
| ! | TGCTATAGCATCACACTTTT+TGG | - | chr7.1:28209687-28209706 | MS.gene016248:intron | 35.0% |
| ! | TTTTATCCTCCTTGAATGGT+GGG | - | chr7.1:28209586-28209605 | MS.gene016248:intron | 35.0% |
| !! | AGCTTTGAGGAAATGTTTGA+GGG | - | chr7.1:28211975-28211994 | MS.gene016248:CDS | 35.0% |
| !! | TAGCTTTGAGGAAATGTTTG+AGG | - | chr7.1:28211974-28211993 | MS.gene016248:CDS | 35.0% |
| !! | TTTTTCAAAAAGGGGTTACC+TGG | + | chr7.1:28208525-28208544 | None:intergenic | 35.0% |
| !!! | CTTAGCTTTTGAGATGCATT+TGG | + | chr7.1:28209885-28209904 | None:intergenic | 35.0% |
| !!! | GAACTTTGAAACCTTTTGGT+TGG | - | chr7.1:28210189-28210208 | MS.gene016248:CDS | 35.0% |
| AAAGGAAGAGTTTGTGTGAC+TGG | - | chr7.1:28208417-28208436 | MS.gene016248:CDS | 40.0% | |
| AACATCCTAATCCAAAAGGG+AGG | - | chr7.1:28211669-28211688 | MS.gene016248:intron | 40.0% | |
| AAGGGTCCAACAACAAAACT+TGG | + | chr7.1:28210299-28210318 | None:intergenic | 40.0% | |
| AATCAATTGGAGTAGCTGTG+TGG | + | chr7.1:28209977-28209996 | None:intergenic | 40.0% | |
| ACAGCATATGACCAACCAAA+AGG | + | chr7.1:28210203-28210222 | None:intergenic | 40.0% | |
| ACCACTGTTAGATCTAATCC+AGG | - | chr7.1:28208504-28208523 | MS.gene016248:CDS | 40.0% | |
| ACTGCTCTTCGAAGAATTGT+TGG | - | chr7.1:28210736-28210755 | MS.gene016248:intron | 40.0% | |
| AGAGAGCTTATGGGAGTTAA+AGG | - | chr7.1:28211891-28211910 | MS.gene016248:intron | 40.0% | |
| AGGAAGCTTAGGACAAATGA+AGG | + | chr7.1:28210318-28210337 | None:intergenic | 40.0% | |
| ATCAAGAGACTCCTTGAAGA+TGG | - | chr7.1:28208468-28208487 | MS.gene016248:CDS | 40.0% | |
| ATTACTACACTCCTCCTTTG+TGG | + | chr7.1:28209208-28209227 | None:intergenic | 40.0% | |
| ATTTCCACAGACCTATTCAG+AGG | + | chr7.1:28209020-28209039 | None:intergenic | 40.0% | |
| CCATTCAAGGAGGATAAAAC+CGG | + | chr7.1:28209585-28209604 | None:intergenic | 40.0% | |
| GAGCAAGAAAATTAAGCCCT+AGG | + | chr7.1:28208723-28208742 | None:intergenic | 40.0% | |
| GATTAAGCAAACCACAAAGG+AGG | - | chr7.1:28209194-28209213 | MS.gene016248:intron | 40.0% | |
| GGAAGCTTAGGACAAATGAA+GGG | + | chr7.1:28210317-28210336 | None:intergenic | 40.0% | |
| GTTAGCCACGAGTACATATA+AGG | + | chr7.1:28210851-28210870 | None:intergenic | 40.0% | |
| TAACAGCGTAACCATCTTCA+AGG | + | chr7.1:28208482-28208501 | None:intergenic | 40.0% | |
| TGGCTAACTTTCATCTGTGT+TGG | - | chr7.1:28210863-28210882 | MS.gene016248:intron | 40.0% | |
| TGTAGAACTCACTTGGATGT+TGG | + | chr7.1:28211773-28211792 | None:intergenic | 40.0% | |
| TTCATTTGTCCTAAGCTTCC+TGG | - | chr7.1:28210317-28210336 | MS.gene016248:CDS | 40.0% | |
| ! | ACAAAGGAGGAGTGTAGTAA+TGG | - | chr7.1:28209207-28209226 | MS.gene016248:intron | 40.0% |
| ! | ACACGGATTTGGATTAGATG+CGG | + | chr7.1:28210577-28210596 | None:intergenic | 40.0% |
| ! | ACCTGGATTAGATCTAACAG+TGG | + | chr7.1:28208508-28208527 | None:intergenic | 40.0% |
| ! | AGAACCATTGATGGAGCATT+AGG | - | chr7.1:28210032-28210051 | MS.gene016248:intron | 40.0% |
| ! | AGGAGTGTAGTAATGGAAGA+TGG | - | chr7.1:28209214-28209233 | MS.gene016248:intron | 40.0% |
| ! | CATTTTCTACCCACCATTCA+AGG | + | chr7.1:28209598-28209617 | None:intergenic | 40.0% |
| ! | GATAAAACCGGCTTAGTTAG+AGG | + | chr7.1:28209573-28209592 | None:intergenic | 40.0% |
| ! | GTTTTATCCTCCTTGAATGG+TGG | - | chr7.1:28209585-28209604 | MS.gene016248:intron | 40.0% |
| ! | TCAAAGAAACTGATGGATGC+TGG | - | chr7.1:28211936-28211955 | MS.gene016248:CDS | 40.0% |
| ! | TTGTACCTCCCTTTTGGATT+AGG | + | chr7.1:28211677-28211696 | None:intergenic | 40.0% |
| !! | GTACAGGGTTTATTGGTTCA+TGG | - | chr7.1:28208442-28208461 | MS.gene016248:CDS | 40.0% |
| !! | TTTTGAAGAGAACGAACCAG+AGG | - | chr7.1:28209995-28210014 | MS.gene016248:intron | 40.0% |
| AAGTCCTCTGAATAGGTCTG+TGG | - | chr7.1:28209013-28209032 | MS.gene016248:intron | 45.0% | |
| AAGTGGAAGTTGTTGCATGC+AGG | - | chr7.1:28211560-28211579 | MS.gene016248:intron | 45.0% | |
| CGTCATCAACATGCACCATA+TGG | + | chr7.1:28211622-28211641 | None:intergenic | 45.0% | |
| GTGCTTACTGCAATGATCGT+AGG | - | chr7.1:28210540-28210559 | MS.gene016248:CDS | 45.0% | |
| TAAACTGAGCCAGGAAGCTT+AGG | + | chr7.1:28210329-28210348 | None:intergenic | 45.0% | |
| TATTTCACTGGACCGAGCTT+CGG | - | chr7.1:28208873-28208892 | MS.gene016248:intron | 45.0% | |
| TTTCTACCCACCATTCAAGG+AGG | + | chr7.1:28209595-28209614 | None:intergenic | 45.0% | |
| ! | ACTGGAGGTACAGGGTTTAT+TGG | - | chr7.1:28208435-28208454 | MS.gene016248:CDS | 45.0% |
| ! | GAGCAATTGTACCTCCCTTT+TGG | + | chr7.1:28211683-28211702 | None:intergenic | 45.0% |
| ! | TTTGGTGCACTCTCCGTTAA+AGG | - | chr7.1:28209705-28209724 | MS.gene016248:intron | 45.0% |
| ! | TTTGTGTGACTGGAGGTACA+GGG | - | chr7.1:28208427-28208446 | MS.gene016248:CDS | 45.0% |
| !! | CCGGTTTTATCCTCCTTGAA+TGG | - | chr7.1:28209582-28209601 | MS.gene016248:intron | 45.0% |
| !! | TTTTGATAGCAGCCGAAGCT+CGG | + | chr7.1:28208888-28208907 | None:intergenic | 45.0% |
| !! | ATATTTAATAAAAAAAAAGT+TGG | - | chr7.1:28209409-28209428 | MS.gene016248:intron | 5.0% |
| !!! | ATTATAGAAAATTTTATATA+AGG | - | chr7.1:28209300-28209319 | MS.gene016248:intron | 5.0% |
| !!! | TTAATTTAAAAATCTTTTAT+AGG | + | chr7.1:28211529-28211548 | None:intergenic | 5.0% |
| !!! | TTATAGAAAATTTTATATAA+GGG | - | chr7.1:28209301-28209320 | MS.gene016248:intron | 5.0% |
| ATGCACCATATGGAGACGAG+AGG | + | chr7.1:28211612-28211631 | None:intergenic | 50.0% | |
| GGAAGAGTTTGTGTGACTGG+AGG | - | chr7.1:28208420-28208439 | MS.gene016248:CDS | 50.0% | |
| GGGCGCAATTGAATGTTGCA+AGG | - | chr7.1:28211995-28212014 | MS.gene016248:CDS | 50.0% | |
| ! | GCAGCAATTGAAGGGTGCAT+TGG | - | chr7.1:28209945-28209964 | MS.gene016248:intron | 50.0% |
| ! | GTTTGTGTGACTGGAGGTAC+AGG | - | chr7.1:28208426-28208445 | MS.gene016248:CDS | 50.0% |
| GGCAGCCTCTCGTCTCCATA+TGG | - | chr7.1:28211604-28211623 | MS.gene016248:intron | 60.0% | |
| TGGAGACGAGAGGCTGCCAA+TGG | + | chr7.1:28211602-28211621 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 28208405 | 28212034 | 28208405 | ID=MS.gene016248 |
| chr7.1 | mRNA | 28208405 | 28212034 | 28208405 | ID=MS.gene016248.t1;Parent=MS.gene016248 |
| chr7.1 | exon | 28211914 | 28212034 | 28211914 | ID=MS.gene016248.t1.exon1;Parent=MS.gene016248.t1 |
| chr7.1 | CDS | 28211914 | 28212034 | 28211914 | ID=cds.MS.gene016248.t1;Parent=MS.gene016248.t1 |
| chr7.1 | exon | 28210068 | 28210595 | 28210068 | ID=MS.gene016248.t1.exon2;Parent=MS.gene016248.t1 |
| chr7.1 | CDS | 28210068 | 28210595 | 28210068 | ID=cds.MS.gene016248.t1;Parent=MS.gene016248.t1 |
| chr7.1 | exon | 28208659 | 28208857 | 28208659 | ID=MS.gene016248.t1.exon3;Parent=MS.gene016248.t1 |
| chr7.1 | CDS | 28208659 | 28208857 | 28208659 | ID=cds.MS.gene016248.t1;Parent=MS.gene016248.t1 |
| chr7.1 | exon | 28208405 | 28208546 | 28208405 | ID=MS.gene016248.t1.exon4;Parent=MS.gene016248.t1 |
| chr7.1 | CDS | 28208405 | 28208546 | 28208405 | ID=cds.MS.gene016248.t1;Parent=MS.gene016248.t1 |
| Gene Sequence |
| Protein sequence |
