Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40148.t1 | ADK95116.1 | 99.7 | 291 | 1 | 0 | 93 | 383 | 44 | 334 | 1.20E-159 | 572.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40148.t1 | D7U6G6 | 72.8 | 294 | 80 | 0 | 93 | 386 | 44 | 337 | 7.6e-126 | 451.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40148.t1 | E0AE70 | 99.7 | 291 | 1 | 0 | 93 | 383 | 44 | 334 | 8.8e-160 | 572.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene92810 | MS.gene40148 | PPI |
| MS.gene27776 | MS.gene40148 | PPI |
| MS.gene40148 | MS.gene92808 | PPI |
| MS.gene40148 | MS.gene016248 | PPI |
| MS.gene40148 | MS.gene27778 | PPI |
| MS.gene40148 | MS.gene27554 | PPI |
| MS.gene40148 | MS.gene27552 | PPI |
| MS.gene40148 | MS.gene27550 | PPI |
| MS.gene40148 | MS.gene27779 | PPI |
| MS.gene92809 | MS.gene40148 | PPI |
| MS.gene40148 | MS.gene56554 | PPI |
| MS.gene40148 | MS.gene016245 | PPI |
| MS.gene40148 | MS.gene016246 | PPI |
| MS.gene031525 | MS.gene40148 | PPI |
| MS.gene27553 | MS.gene40148 | PPI |
| MS.gene40148 | MS.gene92812 | PPI |
| MS.gene40148 | MS.gene27775 | PPI |
| MS.gene27551 | MS.gene40148 | PPI |
| MS.gene016249 | MS.gene40148 | PPI |
| MS.gene006771 | MS.gene40148 | PPI |
| MS.gene40148 | MS.gene92811 | PPI |
| MS.gene40148 | MS.gene96808 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40148.t1 | MTR_4g092080 | 94.845 | 291 | 15 | 0 | 93 | 383 | 46 | 336 | 0.0 | 575 |
| MS.gene40148.t1 | MTR_1g022440 | 40.741 | 297 | 165 | 4 | 93 | 387 | 40 | 327 | 6.61e-78 | 244 |
| MS.gene40148.t1 | MTR_1g022445 | 43.003 | 293 | 156 | 4 | 97 | 387 | 44 | 327 | 2.08e-77 | 242 |
| MS.gene40148.t1 | MTR_7g074820 | 39.427 | 279 | 160 | 4 | 109 | 385 | 58 | 329 | 1.51e-62 | 204 |
| MS.gene40148.t1 | MTR_7g074880 | 37.276 | 279 | 163 | 4 | 109 | 385 | 58 | 326 | 9.99e-60 | 196 |
| MS.gene40148.t1 | MTR_7g074730 | 35.971 | 278 | 168 | 3 | 110 | 385 | 59 | 328 | 1.00e-59 | 196 |
| MS.gene40148.t1 | MTR_7g074850 | 37.276 | 279 | 166 | 3 | 109 | 385 | 58 | 329 | 6.53e-59 | 194 |
| MS.gene40148.t1 | MTR_4g081440 | 37.370 | 289 | 172 | 3 | 97 | 376 | 57 | 345 | 2.75e-58 | 194 |
| MS.gene40148.t1 | MTR_4g081440 | 37.793 | 299 | 156 | 6 | 97 | 376 | 53 | 340 | 5.40e-58 | 192 |
| MS.gene40148.t1 | MTR_7g074870 | 36.299 | 281 | 163 | 4 | 109 | 385 | 20 | 288 | 1.80e-56 | 187 |
| MS.gene40148.t1 | MTR_7g074710 | 35.125 | 279 | 169 | 3 | 109 | 385 | 58 | 326 | 2.89e-56 | 187 |
| MS.gene40148.t1 | MTR_2g101330 | 35.052 | 291 | 175 | 8 | 97 | 385 | 41 | 319 | 1.30e-50 | 173 |
| MS.gene40148.t1 | MTR_3g005210 | 37.282 | 287 | 164 | 7 | 97 | 380 | 42 | 315 | 1.95e-48 | 167 |
| MS.gene40148.t1 | MTR_8g062440 | 37.906 | 277 | 156 | 6 | 91 | 364 | 39 | 302 | 6.29e-48 | 166 |
| MS.gene40148.t1 | MTR_8g062110 | 36.860 | 293 | 167 | 8 | 91 | 380 | 40 | 317 | 7.94e-48 | 165 |
| MS.gene40148.t1 | MTR_8g062110 | 36.860 | 293 | 167 | 8 | 91 | 380 | 49 | 326 | 9.24e-48 | 166 |
| MS.gene40148.t1 | MTR_8g062440 | 37.500 | 272 | 154 | 6 | 91 | 360 | 39 | 296 | 2.72e-47 | 164 |
| MS.gene40148.t1 | MTR_8g062440 | 38.267 | 277 | 154 | 7 | 91 | 364 | 39 | 301 | 3.77e-47 | 164 |
| MS.gene40148.t1 | MTR_3g005170 | 36.177 | 293 | 171 | 7 | 93 | 382 | 42 | 321 | 4.42e-47 | 163 |
| MS.gene40148.t1 | MTR_3g005170 | 39.113 | 248 | 137 | 5 | 93 | 338 | 42 | 277 | 4.63e-47 | 162 |
| MS.gene40148.t1 | MTR_8g062110 | 38.956 | 249 | 136 | 6 | 91 | 337 | 40 | 274 | 6.36e-47 | 162 |
| MS.gene40148.t1 | MTR_8g062110 | 38.956 | 249 | 136 | 6 | 91 | 337 | 40 | 274 | 7.44e-47 | 162 |
| MS.gene40148.t1 | MTR_4g077100 | 38.571 | 280 | 150 | 8 | 91 | 364 | 42 | 305 | 1.78e-46 | 162 |
| MS.gene40148.t1 | MTR_4g077130 | 37.857 | 280 | 152 | 8 | 91 | 364 | 40 | 303 | 2.73e-46 | 161 |
| MS.gene40148.t1 | MTR_4g077100 | 40.000 | 250 | 135 | 6 | 91 | 338 | 42 | 278 | 8.64e-46 | 159 |
| MS.gene40148.t1 | MTR_4g023730 | 31.690 | 284 | 174 | 5 | 109 | 385 | 59 | 329 | 7.68e-43 | 152 |
| MS.gene40148.t1 | MTR_3g014200 | 92.754 | 69 | 5 | 0 | 1 | 69 | 1 | 69 | 1.80e-42 | 144 |
| MS.gene40148.t1 | MTR_4g009040 | 35.811 | 296 | 165 | 10 | 97 | 386 | 48 | 324 | 1.57e-41 | 149 |
| MS.gene40148.t1 | MTR_5g072620 | 32.890 | 301 | 176 | 9 | 93 | 385 | 37 | 319 | 2.06e-39 | 143 |
| MS.gene40148.t1 | MTR_4g009040 | 35.333 | 300 | 165 | 11 | 97 | 386 | 48 | 328 | 2.38e-39 | 143 |
| MS.gene40148.t1 | MTR_4g092090 | 93.220 | 59 | 4 | 0 | 11 | 69 | 11 | 69 | 9.63e-37 | 129 |
| MS.gene40148.t1 | MTR_4g092090 | 93.220 | 59 | 4 | 0 | 11 | 69 | 23 | 81 | 1.07e-36 | 129 |
| MS.gene40148.t1 | MTR_3g005170 | 35.833 | 240 | 139 | 6 | 145 | 382 | 64 | 290 | 1.30e-35 | 132 |
| MS.gene40148.t1 | MTR_4g009690 | 35.254 | 295 | 167 | 9 | 97 | 386 | 48 | 323 | 1.95e-35 | 132 |
| MS.gene40148.t1 | MTR_2g013230 | 28.772 | 285 | 194 | 5 | 109 | 385 | 57 | 340 | 2.21e-35 | 133 |
| MS.gene40148.t1 | MTR_5g056600 | 29.831 | 295 | 186 | 9 | 97 | 385 | 40 | 319 | 3.39e-35 | 132 |
| MS.gene40148.t1 | MTR_2g104960 | 35.959 | 292 | 167 | 10 | 97 | 385 | 55 | 329 | 1.00e-34 | 131 |
| MS.gene40148.t1 | MTR_3g031650 | 31.208 | 298 | 175 | 9 | 96 | 383 | 40 | 317 | 1.45e-34 | 130 |
| MS.gene40148.t1 | MTR_2g028620 | 31.419 | 296 | 181 | 11 | 99 | 387 | 48 | 328 | 9.33e-34 | 128 |
| MS.gene40148.t1 | MTR_4g009690 | 35.135 | 296 | 167 | 10 | 97 | 386 | 48 | 324 | 1.14e-33 | 128 |
| MS.gene40148.t1 | MTR_4g006940 | 33.219 | 292 | 175 | 9 | 97 | 385 | 52 | 326 | 2.96e-33 | 127 |
| MS.gene40148.t1 | MTR_2g013260 | 29.123 | 285 | 189 | 6 | 109 | 383 | 57 | 338 | 3.22e-33 | 127 |
| MS.gene40148.t1 | MTR_2g028620 | 33.333 | 243 | 146 | 8 | 99 | 337 | 48 | 278 | 1.18e-32 | 125 |
| MS.gene40148.t1 | MTR_4g006940 | 35.102 | 245 | 142 | 6 | 97 | 340 | 52 | 280 | 1.77e-32 | 123 |
| MS.gene40148.t1 | MTR_4g006940 | 35.102 | 245 | 142 | 6 | 97 | 340 | 52 | 280 | 1.77e-32 | 123 |
| MS.gene40148.t1 | MTR_7g117190 | 28.669 | 293 | 193 | 6 | 105 | 385 | 52 | 340 | 6.65e-32 | 123 |
| MS.gene40148.t1 | MTR_3g031650 | 31.325 | 249 | 147 | 6 | 96 | 337 | 40 | 271 | 1.37e-31 | 121 |
| MS.gene40148.t1 | MTR_8g062110 | 34.764 | 233 | 136 | 6 | 150 | 380 | 13 | 231 | 1.52e-31 | 120 |
| MS.gene40148.t1 | MTR_2g013250 | 28.014 | 282 | 194 | 5 | 110 | 383 | 57 | 337 | 2.76e-31 | 122 |
| MS.gene40148.t1 | MTR_8g062110 | 36.649 | 191 | 107 | 4 | 148 | 337 | 11 | 188 | 9.88e-31 | 116 |
| MS.gene40148.t1 | MTR_2g013260 | 30.672 | 238 | 153 | 5 | 110 | 337 | 58 | 293 | 5.12e-29 | 114 |
| MS.gene40148.t1 | MTR_7g117190 | 29.317 | 249 | 161 | 5 | 105 | 341 | 52 | 297 | 1.75e-27 | 110 |
| MS.gene40148.t1 | MTR_2g013230 | 28.033 | 239 | 163 | 5 | 155 | 385 | 13 | 250 | 4.86e-27 | 108 |
| MS.gene40148.t1 | MTR_2g013260 | 28.452 | 239 | 158 | 6 | 155 | 383 | 32 | 267 | 2.25e-24 | 101 |
| MS.gene40148.t1 | MTR_7g117190 | 28.017 | 232 | 151 | 6 | 166 | 385 | 3 | 230 | 2.16e-21 | 92.4 |
| MS.gene40148.t1 | MTR_3g011130 | 41.176 | 119 | 65 | 4 | 151 | 267 | 30 | 145 | 1.36e-16 | 76.6 |
| MS.gene40148.t1 | MTR_0685s0030 | 33.553 | 152 | 85 | 3 | 217 | 364 | 3 | 142 | 4.44e-16 | 75.5 |
| MS.gene40148.t1 | MTR_0685s0030 | 35.246 | 122 | 70 | 1 | 217 | 338 | 3 | 115 | 2.11e-15 | 72.4 |
| MS.gene40148.t1 | MTR_0164s0070 | 36.283 | 113 | 68 | 4 | 96 | 204 | 40 | 152 | 1.98e-14 | 72.0 |
| MS.gene40148.t1 | MTR_6g406250 | 28.767 | 219 | 120 | 9 | 110 | 314 | 104 | 300 | 4.78e-14 | 73.2 |
| MS.gene40148.t1 | MTR_5g029990 | 25.573 | 262 | 169 | 8 | 109 | 365 | 57 | 297 | 1.86e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40148.t1 | AT1G61720 | 59.122 | 296 | 120 | 1 | 91 | 386 | 44 | 338 | 2.45e-121 | 355 |
| MS.gene40148.t1 | AT5G42800 | 41.414 | 297 | 162 | 5 | 91 | 385 | 39 | 325 | 1.73e-77 | 244 |
| MS.gene40148.t1 | AT4G35420 | 38.514 | 296 | 168 | 7 | 91 | 385 | 39 | 321 | 1.93e-58 | 193 |
| MS.gene40148.t1 | AT4G27250 | 38.710 | 279 | 160 | 5 | 110 | 377 | 60 | 338 | 5.49e-55 | 185 |
| MS.gene40148.t1 | AT4G27250 | 38.351 | 279 | 151 | 7 | 110 | 377 | 60 | 328 | 5.77e-51 | 174 |
| MS.gene40148.t1 | AT1G51410 | 35.350 | 314 | 179 | 9 | 80 | 386 | 28 | 324 | 1.90e-48 | 167 |
| MS.gene40148.t1 | AT2G45400 | 33.224 | 304 | 189 | 6 | 89 | 385 | 11 | 307 | 5.67e-48 | 165 |
| MS.gene40148.t1 | AT2G45400 | 33.571 | 280 | 175 | 4 | 110 | 385 | 92 | 364 | 5.60e-47 | 164 |
| MS.gene40148.t1 | AT1G09510 | 40.336 | 238 | 128 | 5 | 97 | 332 | 44 | 269 | 6.56e-46 | 160 |
| MS.gene40148.t1 | AT1G09490 | 37.402 | 254 | 143 | 6 | 87 | 337 | 3 | 243 | 2.70e-43 | 152 |
| MS.gene40148.t1 | AT5G19440 | 35.172 | 290 | 172 | 7 | 97 | 383 | 46 | 322 | 3.21e-43 | 153 |
| MS.gene40148.t1 | AT1G09490 | 38.525 | 244 | 134 | 6 | 97 | 337 | 44 | 274 | 2.00e-42 | 151 |
| MS.gene40148.t1 | AT1G09480 | 39.574 | 235 | 126 | 6 | 97 | 328 | 44 | 265 | 6.40e-42 | 150 |
| MS.gene40148.t1 | AT1G09480 | 39.574 | 235 | 126 | 6 | 97 | 328 | 91 | 312 | 1.40e-41 | 150 |
| MS.gene40148.t1 | AT2G33600 | 37.024 | 289 | 164 | 9 | 91 | 377 | 40 | 312 | 2.02e-41 | 148 |
| MS.gene40148.t1 | AT1G66800 | 35.154 | 293 | 162 | 9 | 97 | 382 | 44 | 315 | 2.25e-41 | 148 |
| MS.gene40148.t1 | AT2G33590 | 35.336 | 283 | 167 | 8 | 97 | 377 | 44 | 312 | 4.24e-41 | 147 |
| MS.gene40148.t1 | AT2G45400 | 34.764 | 233 | 142 | 3 | 110 | 339 | 92 | 317 | 2.63e-40 | 145 |
| MS.gene40148.t1 | AT1G09500 | 37.705 | 244 | 127 | 7 | 97 | 332 | 44 | 270 | 4.48e-39 | 141 |
| MS.gene40148.t1 | AT1G09500 | 37.705 | 244 | 127 | 7 | 97 | 332 | 10 | 236 | 6.23e-39 | 141 |
| MS.gene40148.t1 | AT2G02400 | 31.313 | 297 | 174 | 11 | 99 | 385 | 42 | 318 | 8.25e-39 | 141 |
| MS.gene40148.t1 | AT1G09500 | 36.187 | 257 | 139 | 7 | 97 | 345 | 44 | 283 | 1.22e-38 | 141 |
| MS.gene40148.t1 | AT5G58490 | 32.867 | 286 | 154 | 10 | 97 | 361 | 45 | 313 | 1.09e-34 | 130 |
| MS.gene40148.t1 | AT1G25460 | 28.826 | 281 | 183 | 6 | 109 | 385 | 52 | 319 | 1.33e-33 | 127 |
| MS.gene40148.t1 | AT1G68540 | 29.682 | 283 | 177 | 10 | 110 | 385 | 54 | 321 | 1.35e-33 | 127 |
| MS.gene40148.t1 | AT1G15950 | 36.694 | 248 | 140 | 7 | 97 | 343 | 48 | 279 | 6.12e-32 | 122 |
| MS.gene40148.t1 | AT1G80820 | 34.247 | 292 | 172 | 10 | 97 | 385 | 43 | 317 | 3.63e-31 | 121 |
| MS.gene40148.t1 | AT1G76470 | 32.765 | 293 | 185 | 7 | 97 | 387 | 42 | 324 | 5.34e-31 | 120 |
| MS.gene40148.t1 | AT1G15950 | 34.247 | 292 | 172 | 10 | 97 | 385 | 48 | 322 | 1.19e-30 | 120 |
| MS.gene40148.t1 | AT1G15950 | 34.247 | 292 | 172 | 10 | 97 | 385 | 48 | 322 | 1.19e-30 | 120 |
| MS.gene40148.t1 | AT1G15950 | 35.055 | 271 | 157 | 9 | 97 | 364 | 48 | 302 | 7.26e-30 | 118 |
| MS.gene40148.t1 | AT1G80820 | 36.327 | 245 | 139 | 7 | 97 | 340 | 43 | 271 | 1.46e-29 | 115 |
| MS.gene40148.t1 | AT1G15950 | 35.918 | 245 | 140 | 7 | 97 | 340 | 48 | 276 | 2.04e-29 | 115 |
| MS.gene40148.t1 | AT1G15950 | 36.066 | 244 | 139 | 7 | 97 | 339 | 48 | 275 | 3.64e-29 | 115 |
| MS.gene40148.t1 | AT2G45400 | 35.976 | 164 | 102 | 2 | 110 | 270 | 92 | 255 | 9.66e-25 | 102 |
| MS.gene40148.t1 | AT1G15950 | 32.489 | 237 | 145 | 7 | 151 | 385 | 1 | 224 | 1.06e-22 | 96.3 |
| MS.gene40148.t1 | AT1G68540 | 27.193 | 228 | 147 | 8 | 163 | 385 | 1 | 214 | 5.86e-22 | 93.6 |
| MS.gene40148.t1 | AT4G25315 | 62.319 | 69 | 25 | 1 | 1 | 69 | 1 | 68 | 9.62e-22 | 89.7 |
| MS.gene40148.t1 | AT2G23910 | 32.075 | 159 | 94 | 4 | 156 | 314 | 69 | 213 | 2.50e-19 | 87.4 |
| MS.gene40148.t1 | AT2G23910 | 32.075 | 159 | 94 | 4 | 156 | 314 | 103 | 247 | 3.75e-19 | 87.0 |
| MS.gene40148.t1 | AT2G23910 | 32.075 | 159 | 94 | 4 | 156 | 314 | 103 | 247 | 4.29e-19 | 87.0 |
| MS.gene40148.t1 | AT2G23910 | 32.075 | 159 | 94 | 4 | 156 | 314 | 103 | 247 | 4.48e-19 | 87.4 |
| MS.gene40148.t1 | AT4G30470 | 28.495 | 186 | 113 | 6 | 130 | 314 | 80 | 246 | 1.30e-17 | 83.2 |
| MS.gene40148.t1 | AT4G25315 | 47.727 | 88 | 26 | 2 | 1 | 69 | 1 | 87 | 9.74e-17 | 76.6 |
| MS.gene40148.t1 | AT5G14700 | 29.231 | 195 | 113 | 8 | 129 | 314 | 127 | 305 | 2.19e-11 | 65.1 |
Find 71 sgRNAs with CRISPR-Local
Find 361 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATAACTGTCGCGGTAAA+TGG | 0.205854 | 4.3:+22193880 | MS.gene40148:CDS |
| GATTATCAACTTTGCCTTGC+TGG | 0.226247 | 4.3:-22199634 | None:intergenic |
| TACTGCCGCATTTGATAAAC+TGG | 0.258041 | 4.3:-22193840 | None:intergenic |
| ATCAAATGCGGCAGTATTAC+AGG | 0.275072 | 4.3:+22193847 | MS.gene40148:CDS |
| CCTCATAGCACTGCAAAGTT+TGG | 0.275725 | 4.3:+22197973 | MS.gene40148:CDS |
| CGAAGGGACTGGTCATATTA+TGG | 0.276006 | 4.3:+22198370 | MS.gene40148:CDS |
| ACCAACCTCGACTTGAGATT+TGG | 0.293709 | 4.3:-22193940 | None:intergenic |
| CCAACCTCGACTTGAGATTT+GGG | 0.322144 | 4.3:-22193939 | None:intergenic |
| TTCAATACACCTTTGATTGC+TGG | 0.333253 | 4.3:-22198263 | None:intergenic |
| TCTTCAAATACTCCAGAGTT+TGG | 0.365279 | 4.3:-22199719 | None:intergenic |
| CTCGACTTGAGATTTGGGTT+TGG | 0.382849 | 4.3:-22193934 | None:intergenic |
| TTCCTTTCAAAGCATTTATG+AGG | 0.388148 | 4.3:-22199202 | None:intergenic |
| ATTCCCATGGAAACACTAGA+TGG | 0.394524 | 4.3:-22199063 | None:intergenic |
| TCTGAAAAGCTTATCAAAGA+AGG | 0.411453 | 4.3:+22199660 | MS.gene40148:CDS |
| CTCATAGCACTGCAAAGTTT+GGG | 0.415377 | 4.3:+22197974 | MS.gene40148:CDS |
| TATCAAAATCTACTTCTTCA+AGG | 0.417228 | 4.3:-22199751 | None:intergenic |
| ATGGGAATGTCACTTCTAAC+AGG | 0.424075 | 4.3:+22199078 | MS.gene40148:CDS |
| CTCAAAAGTGCTAGCTGAAA+AGG | 0.425883 | 4.3:+22198951 | MS.gene40148:CDS |
| GTGATACCTACTCTAACAAT+TGG | 0.428631 | 4.3:+22199018 | MS.gene40148:CDS |
| ACAAGTTCACATCCTGCTAT+AGG | 0.437816 | 4.3:-22198049 | None:intergenic |
| TGATTCTGCCAGCTGATGTT+GGG | 0.454233 | 4.3:-22195846 | None:intergenic |
| AAAGGAATGCAGATCCTGTC+AGG | 0.463412 | 4.3:+22199218 | MS.gene40148:CDS |
| CTGAGAAACTTAGCAAGCTC+AGG | 0.468414 | 4.3:-22199350 | None:intergenic |
| GTGATTCTGCCAGCTGATGT+TGG | 0.472600 | 4.3:-22195847 | None:intergenic |
| TATCCCATCTAGTGTTTCCA+TGG | 0.473150 | 4.3:+22199059 | MS.gene40148:CDS |
| TTCCTCATAAATGCTTTGAA+AGG | 0.475020 | 4.3:+22199200 | MS.gene40148:CDS |
| TGACTTCAAGCTTACTCAGT+TGG | 0.478141 | 4.3:-22199398 | None:intergenic |
| ATGCGGCAGTATTACAGGCT+TGG | 0.485797 | 4.3:+22193852 | MS.gene40148:CDS |
| CCAAACTTTGCAGTGCTATG+AGG | 0.494447 | 4.3:-22197973 | None:intergenic |
| GATGAAGTCCCAACATCAGC+TGG | 0.502526 | 4.3:+22195838 | MS.gene40148:intron |
| ATATTATGGATGAAACCAAC+TGG | 0.503991 | 4.3:+22198384 | MS.gene40148:CDS |
| CTGAAAAGCTTATCAAAGAA+GGG | 0.506098 | 4.3:+22199661 | MS.gene40148:CDS |
| TCTTGAGAGGCAAAGTTCAC+AGG | 0.513934 | 4.3:-22198088 | None:intergenic |
| CGATAATTTGCGTTTCATTG+TGG | 0.520266 | 4.3:-22193685 | None:intergenic |
| CACTGCAAAGCCACCCACTT+GGG | 0.520500 | 4.3:+22198427 | MS.gene40148:CDS |
| TCTGGAGTATTTGAAGACTC+AGG | 0.526497 | 4.3:+22199725 | MS.gene40148:CDS |
| CTGCTACAAATATATGAGCT+CGG | 0.536593 | 4.3:-22199274 | None:intergenic |
| TGCTAGCTGAAAAGGCTGCA+TGG | 0.537823 | 4.3:+22198959 | MS.gene40148:CDS |
| TGATGGATATCGAACCTGAC+AGG | 0.542607 | 4.3:-22199232 | None:intergenic |
| TCGAACACTTTGATGCACTC+TGG | 0.542742 | 4.3:+22193712 | MS.gene40148:CDS |
| CTGGAGTATTTGAAGACTCA+GGG | 0.551188 | 4.3:+22199726 | MS.gene40148:CDS |
| AGTTCACAGGTGTAGCAAGT+TGG | 0.553446 | 4.3:-22198075 | None:intergenic |
| GAAGGACCAATTGTTAGAGT+AGG | 0.556874 | 4.3:-22199024 | None:intergenic |
| AAACTCAACATCAGACCAGT+TGG | 0.559402 | 4.3:-22198399 | None:intergenic |
| ACTGACTAGCTGGAAGGAAG+AGG | 0.561724 | 4.3:-22195892 | None:intergenic |
| ATGATAAAACCAGCAATCAA+AGG | 0.568131 | 4.3:+22198254 | MS.gene40148:CDS |
| ACACTGCAAAGCCACCCACT+TGG | 0.573692 | 4.3:+22198426 | MS.gene40148:CDS |
| AATATCCTCGACATGAGTGA+TGG | 0.579257 | 4.3:-22199249 | None:intergenic |
| GTCGCGGTAAATGGAAAGCA+TGG | 0.579467 | 4.3:+22193889 | MS.gene40148:CDS |
| TGTAGTTATGTCGTCAGAGA+AGG | 0.583277 | 4.3:+22193650 | None:intergenic |
| ATAAACGAACTCGAAGGGAC+TGG | 0.592956 | 4.3:+22198359 | MS.gene40148:CDS |
| ATTTGATGATTGCTCCAGCA+AGG | 0.593062 | 4.3:+22199620 | MS.gene40148:CDS |
| ATCCCATCTAGTGTTTCCAT+GGG | 0.594221 | 4.3:+22199060 | MS.gene40148:CDS |
| GGGATATCTTGTGTTAGAGA+AGG | 0.600247 | 4.3:-22199042 | None:intergenic |
| GAAGGGTTCAGTTTCAAGCA+TGG | 0.601008 | 4.3:+22199678 | MS.gene40148:CDS |
| ACCTACCTCGGGATCTTGAG+AGG | 0.609339 | 4.3:-22198101 | None:intergenic |
| GGTTCTCTTGATAACTGTCG+CGG | 0.618772 | 4.3:+22193873 | MS.gene40148:CDS |
| TTCCCATGGAAACACTAGAT+GGG | 0.620353 | 4.3:-22199062 | None:intergenic |
| GTGACTATAAACGAACTCGA+AGG | 0.630121 | 4.3:+22198353 | MS.gene40148:CDS |
| ACTGCCGCATTTGATAAACT+GGG | 0.632430 | 4.3:-22193839 | None:intergenic |
| TGACTATAAACGAACTCGAA+GGG | 0.632588 | 4.3:+22198354 | MS.gene40148:CDS |
| CTTTGCCTCTCAAGATCCCG+AGG | 0.635384 | 4.3:+22198096 | MS.gene40148:CDS |
| TGTTAGAAGTGACATTCCCA+TGG | 0.640999 | 4.3:-22199076 | None:intergenic |
| CAGCCCCAGTTTATCAAATG+CGG | 0.642365 | 4.3:+22193835 | MS.gene40148:intron |
| GATATCCATCACTCATGTCG+AGG | 0.645745 | 4.3:+22199244 | MS.gene40148:CDS |
| GCAGAAACTGACTAGCTGGA+AGG | 0.647146 | 4.3:-22195898 | None:intergenic |
| AGAATCACTCAGAGTGACAG+AGG | 0.659658 | 4.3:+22195862 | MS.gene40148:CDS |
| GGAGTATTTGAAGACTCAGG+GGG | 0.662530 | 4.3:+22199728 | MS.gene40148:CDS |
| CAAACCCAAATCTCAAGTCG+AGG | 0.664433 | 4.3:+22193935 | MS.gene40148:CDS |
| TGGAGTATTTGAAGACTCAG+GGG | 0.686930 | 4.3:+22199727 | MS.gene40148:CDS |
| CTGCCGCATTTGATAAACTG+GGG | 0.687116 | 4.3:-22193838 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAGTATAATAGTAAAAAA+TGG | + | chr4.3:22197054-22197073 | MS.gene40148:intron | 10.0% |
| !! | CATATATATATATAATTGTA+AGG | - | chr4.3:22195340-22195359 | None:intergenic | 10.0% |
| !!! | TATATTAATTTGTTTGATTA+CGG | + | chr4.3:22195995-22196014 | MS.gene40148:intron | 10.0% |
| !! | AATTTGGTATAAACTTTATT+TGG | - | chr4.3:22196406-22196425 | None:intergenic | 15.0% |
| !! | ATATGTTCAAAATCTTTAAA+GGG | + | chr4.3:22193995-22194014 | MS.gene40148:intron | 15.0% |
| !! | CTTCAAAAATTAATTCAATT+AGG | - | chr4.3:22198166-22198185 | None:intergenic | 15.0% |
| !! | TATATGTTCAAAATCTTTAA+AGG | + | chr4.3:22193994-22194013 | MS.gene40148:intron | 15.0% |
| !! | TGCAATTCATATATATATTA+TGG | - | chr4.3:22198780-22198799 | None:intergenic | 15.0% |
| !!! | AAACAGTTTTTAACTTTTTA+TGG | - | chr4.3:22197244-22197263 | None:intergenic | 15.0% |
| !!! | AGATTATTTTGACATAAAAT+GGG | + | chr4.3:22198478-22198497 | MS.gene40148:intron | 15.0% |
| !!! | CACACAATATTTTAATATTT+TGG | - | chr4.3:22197529-22197548 | None:intergenic | 15.0% |
| !! | AATCCTTAAACCATTTAATT+TGG | - | chr4.3:22199114-22199133 | None:intergenic | 20.0% |
| !! | ATAACCATTTAAATTGTTGT+CGG | - | chr4.3:22198514-22198533 | None:intergenic | 20.0% |
| !! | ATAGTAAAAAATGGAAAATC+AGG | + | chr4.3:22197063-22197082 | MS.gene40148:intron | 20.0% |
| !! | ATATATAAATTAGCCATTGA+TGG | - | chr4.3:22193979-22193998 | None:intergenic | 20.0% |
| !! | TAAAATTGAATACATGGTTA+TGG | + | chr4.3:22198540-22198559 | MS.gene40148:intron | 20.0% |
| !! | TAAAGTTTATACCAAATTGA+AGG | + | chr4.3:22196408-22196427 | MS.gene40148:intron | 20.0% |
| !! | TATATAAATTAGCCATTGAT+GGG | - | chr4.3:22193978-22193997 | None:intergenic | 20.0% |
| !! | TATATATAATTGTAAGGTAC+AGG | - | chr4.3:22195334-22195353 | None:intergenic | 20.0% |
| !! | TATGGTTAAGATTTCAAATA+AGG | + | chr4.3:22198558-22198577 | MS.gene40148:intron | 20.0% |
| !! | TCTGCTCATAAATTTAATAA+TGG | + | chr4.3:22196941-22196960 | MS.gene40148:intron | 20.0% |
| !! | TTTGGTAAAGAACAATATAT+AGG | + | chr4.3:22196833-22196852 | MS.gene40148:intron | 20.0% |
| !!! | ATCTCAATTTTATATTTTGC+AGG | + | chr4.3:22199170-22199189 | MS.gene40148:intron | 20.0% |
| !!! | ATTTTCATTCTTATTTTCTG+CGG | + | chr4.3:22196445-22196464 | MS.gene40148:intron | 20.0% |
| !!! | ATTTTTGAAGTATATGCATT+TGG | + | chr4.3:22198176-22198195 | MS.gene40148:intron | 20.0% |
| !!! | CAGATTATTTTGACATAAAA+TGG | + | chr4.3:22198477-22198496 | MS.gene40148:intron | 20.0% |
| !!! | CATTTTATGTCAAAATAATC+TGG | - | chr4.3:22198479-22198498 | None:intergenic | 20.0% |
| !!! | TAGATCAATGTTATTTTCTT+CGG | - | chr4.3:22198992-22199011 | None:intergenic | 20.0% |
| !!! | TCGTGTTTAATTTTTTTCAA+TGG | + | chr4.3:22198735-22198754 | MS.gene40148:intron | 20.0% |
| !!! | TCTTTGAAATTTATCCATTA+TGG | - | chr4.3:22196639-22196658 | None:intergenic | 20.0% |
| !!! | TTATTGCCTTATAATTTTAC+TGG | + | chr4.3:22196353-22196372 | MS.gene40148:intron | 20.0% |
| !!! | TTTTAACCGTAATGAAATTT+TGG | + | chr4.3:22196561-22196580 | MS.gene40148:intron | 20.0% |
| ! | AAAAAATGAAACTTTGCCTT+AGG | - | chr4.3:22199592-22199611 | None:intergenic | 25.0% |
| ! | AAACATTTCTAATAGCTTAG+AGG | + | chr4.3:22196697-22196716 | MS.gene40148:intron | 25.0% |
| ! | AAACCACCAGTAAAATTATA+AGG | - | chr4.3:22196362-22196381 | None:intergenic | 25.0% |
| ! | AAATTATCATCAAAATGTGC+AGG | + | chr4.3:22198918-22198937 | MS.gene40148:intron | 25.0% |
| ! | AACAATATATAGGAATAGAG+GGG | + | chr4.3:22196843-22196862 | MS.gene40148:intron | 25.0% |
| ! | AATGATTATTTCATAGTGCT+CGG | + | chr4.3:22199490-22199509 | MS.gene40148:intron | 25.0% |
| ! | AATTATCATCAAAATGTGCA+GGG | + | chr4.3:22198919-22198938 | MS.gene40148:intron | 25.0% |
| ! | ACACAAACTTTATCAATACT+GGG | - | chr4.3:22193803-22193822 | None:intergenic | 25.0% |
| ! | ACGGTTATGTTAATTATTAG+TGG | + | chr4.3:22196014-22196033 | MS.gene40148:intron | 25.0% |
| ! | ACTAAAGACCAAATGAATAA+TGG | - | chr4.3:22195751-22195770 | None:intergenic | 25.0% |
| ! | AGAACAATATATAGGAATAG+AGG | + | chr4.3:22196841-22196860 | MS.gene40148:intron | 25.0% |
| ! | ATACAATTGAATGAAGATAG+AGG | - | chr4.3:22196587-22196606 | None:intergenic | 25.0% |
| ! | ATACATTACCTATCTTTCAA+AGG | + | chr4.3:22199540-22199559 | MS.gene40148:intron | 25.0% |
| ! | ATCATTTATGTACTCAACTT+AGG | + | chr4.3:22198856-22198875 | MS.gene40148:intron | 25.0% |
| ! | ATGAGTATATCTTGAAAAGT+TGG | - | chr4.3:22196883-22196902 | None:intergenic | 25.0% |
| ! | CAAACAAATAGAAAAGAAGA+AGG | + | chr4.3:22197324-22197343 | MS.gene40148:intron | 25.0% |
| ! | CATATATATATTATGGTCAG+TGG | - | chr4.3:22198773-22198792 | None:intergenic | 25.0% |
| ! | CGATAAATTTGACAAAATCA+TGG | - | chr4.3:22197816-22197835 | None:intergenic | 25.0% |
| ! | GAACAATATATAGGAATAGA+GGG | + | chr4.3:22196842-22196861 | MS.gene40148:intron | 25.0% |
| ! | GAATTAGAAATGATGACATT+AGG | + | chr4.3:22194311-22194330 | MS.gene40148:intron | 25.0% |
| ! | GAGTGTAAATTAACATATGA+TGG | + | chr4.3:22197294-22197313 | MS.gene40148:intron | 25.0% |
| ! | GATGTTAAATAGAGTAGTTA+TGG | - | chr4.3:22196742-22196761 | None:intergenic | 25.0% |
| ! | GGGTATATTTCATTGTTAAA+AGG | - | chr4.3:22194662-22194681 | None:intergenic | 25.0% |
| ! | GGTTAAATATTCTTTGAACT+TGG | + | chr4.3:22194016-22194035 | MS.gene40148:intron | 25.0% |
| ! | TAAGGACAAATAGAACAAAA+AGG | - | chr4.3:22194043-22194062 | None:intergenic | 25.0% |
| ! | TAATTTGGTCAAAATTACAG+TGG | - | chr4.3:22197785-22197804 | None:intergenic | 25.0% |
| ! | TACACTTGAACTAATGTATT+TGG | - | chr4.3:22194272-22194291 | None:intergenic | 25.0% |
| ! | TATTATCTTGGATGAAATGA+TGG | - | chr4.3:22195810-22195829 | None:intergenic | 25.0% |
| ! | TCAACTGAAAATAAAAACTG+AGG | + | chr4.3:22194690-22194709 | MS.gene40148:intron | 25.0% |
| ! | TGAAAAACAGCCAAATTAAA+TGG | + | chr4.3:22199101-22199120 | MS.gene40148:intron | 25.0% |
| ! | TGAATTAGCGATTAAAAAAC+TGG | - | chr4.3:22197555-22197574 | None:intergenic | 25.0% |
| ! | TTCAAATTGTTGTCGATATT+TGG | + | chr4.3:22198813-22198832 | MS.gene40148:intron | 25.0% |
| !! | AGATTTCAAATAAGGTATCA+TGG | + | chr4.3:22198566-22198585 | MS.gene40148:intron | 25.0% |
| !! | ATTTTCAGTTGAAAGATACA+GGG | - | chr4.3:22194682-22194701 | None:intergenic | 25.0% |
| !! | CAAAACAAACTGTTACATTT+TGG | - | chr4.3:22197164-22197183 | None:intergenic | 25.0% |
| !! | CCAATTAGAAATGATAATGA+GGG | - | chr4.3:22198895-22198914 | None:intergenic | 25.0% |
| !! | GCAGTTTAAAATTGAATACA+TGG | + | chr4.3:22198534-22198553 | MS.gene40148:intron | 25.0% |
| !! | TAACGAATTATTTGAAGTGT+TGG | + | chr4.3:22196969-22196988 | MS.gene40148:intron | 25.0% |
| !! | TATTTTCAGTTGAAAGATAC+AGG | - | chr4.3:22194683-22194702 | None:intergenic | 25.0% |
| !! | TCCAATTAGAAATGATAATG+AGG | - | chr4.3:22198896-22198915 | None:intergenic | 25.0% |
| !! | TGTCTGATATTCATTTTCAT+AGG | + | chr4.3:22196538-22196557 | MS.gene40148:intron | 25.0% |
| !! | TTATATGTGGCTTTTAGATT+TGG | - | chr4.3:22195076-22195095 | None:intergenic | 25.0% |
| !! | TTTTTCCTTTTGAATACTCA+CGG | - | chr4.3:22194959-22194978 | None:intergenic | 25.0% |
| !!! | AACAAAGCCATATTTTTATG+GGG | - | chr4.3:22194156-22194175 | None:intergenic | 25.0% |
| !!! | CAACAAAGCCATATTTTTAT+GGG | - | chr4.3:22194157-22194176 | None:intergenic | 25.0% |
| !!! | CTGTAATTTTGACCAAATTA+CGG | + | chr4.3:22197785-22197804 | MS.gene40148:intron | 25.0% |
| !!! | GTTTTTTAATCGCTAATTCA+TGG | + | chr4.3:22197555-22197574 | MS.gene40148:intron | 25.0% |
| !!! | TTACGAATTTTTTATCCATG+AGG | - | chr4.3:22194866-22194885 | None:intergenic | 25.0% |
| AAACTGTACGAGAAACTATT+AGG | + | chr4.3:22194467-22194486 | MS.gene40148:intron | 30.0% | |
| AAATGGTTTAAGGATTTCCA+AGG | + | chr4.3:22199118-22199137 | MS.gene40148:intron | 30.0% | |
| AACTGAAGATCAAATGACTT+TGG | - | chr4.3:22194197-22194216 | None:intergenic | 30.0% | |
| AAGTGTAATTTACTGTAGAC+GGG | + | chr4.3:22194285-22194304 | MS.gene40148:intron | 30.0% | |
| AATTCTGAATTGAGAAGACT+TGG | + | chr4.3:22196481-22196500 | MS.gene40148:intron | 30.0% | |
| ACGCAAAAAAGTTATGTTTC+GGG | - | chr4.3:22193762-22193781 | None:intergenic | 30.0% | |
| ACGTATATTTGAACACAGTT+TGG | + | chr4.3:22198651-22198670 | MS.gene40148:intron | 30.0% | |
| AGAATCAAACTAAGACATGA+AGG | - | chr4.3:22194998-22195017 | None:intergenic | 30.0% | |
| AGAATGAAAATCTTGCTTTC+TGG | - | chr4.3:22196436-22196455 | None:intergenic | 30.0% | |
| AGCACTTATAGTAGAAAAGA+TGG | + | chr4.3:22194348-22194367 | MS.gene40148:intron | 30.0% | |
| AGTCAACTTAAAAGAAGACT+CGG | - | chr4.3:22195243-22195262 | None:intergenic | 30.0% | |
| AGTGTGTTAGGTTTATCATA+AGG | - | chr4.3:22194061-22194080 | None:intergenic | 30.0% | |
| ATATTATGGATGAAACCAAC+TGG | + | chr4.3:22198384-22198403 | MS.gene40148:CDS | 30.0% | |
| ATCAATATATTTCGATCGTG+TGG | - | chr4.3:22195782-22195801 | None:intergenic | 30.0% | |
| ATGATAAAACCAGCAATCAA+AGG | + | chr4.3:22198254-22198273 | MS.gene40148:CDS | 30.0% | |
| ATGTTCAGTGAATGGTTAAT+AGG | - | chr4.3:22198592-22198611 | None:intergenic | 30.0% | |
| CAAAACTGGCAAAAAATGTA+TGG | + | chr4.3:22196281-22196300 | MS.gene40148:intron | 30.0% | |
| CAAGTGTAATTTACTGTAGA+CGG | + | chr4.3:22194284-22194303 | MS.gene40148:intron | 30.0% | |
| CAATTCAGAATTCAATGTGA+AGG | - | chr4.3:22196473-22196492 | None:intergenic | 30.0% | |
| CAATTTATAGCATTTGCCTT+TGG | - | chr4.3:22195140-22195159 | None:intergenic | 30.0% | |
| CACACAAACTTTATCAATAC+TGG | - | chr4.3:22193804-22193823 | None:intergenic | 30.0% | |
| CAGCCAAATTAAATGGTTTA+AGG | + | chr4.3:22199108-22199127 | MS.gene40148:intron | 30.0% | |
| CATCTGAGGATATATTATCT+TGG | - | chr4.3:22195822-22195841 | None:intergenic | 30.0% | |
| CCCTCATTATCATTTCTAAT+TGG | + | chr4.3:22198892-22198911 | MS.gene40148:intron | 30.0% | |
| CTGAAAAGCTTATCAAAGAA+GGG | + | chr4.3:22199661-22199680 | MS.gene40148:CDS | 30.0% | |
| GAAATAATCATTGTTCTCTG+TGG | - | chr4.3:22199482-22199501 | None:intergenic | 30.0% | |
| GACGCAAAAAAGTTATGTTT+CGG | - | chr4.3:22193763-22193782 | None:intergenic | 30.0% | |
| GAGAATGACATTCAAAATCT+TGG | - | chr4.3:22198621-22198640 | None:intergenic | 30.0% | |
| GGATCTATAGATAAATGAGT+TGG | + | chr4.3:22194492-22194511 | MS.gene40148:intron | 30.0% | |
| GTCATGAAAGAAGAGTTATT+TGG | - | chr4.3:22197222-22197241 | None:intergenic | 30.0% | |
| GTTCAAGTAACTGAACAATT+TGG | + | chr4.3:22197183-22197202 | MS.gene40148:intron | 30.0% | |
| GTTTCCGACAACAATTTAAA+TGG | + | chr4.3:22198507-22198526 | MS.gene40148:intron | 30.0% | |
| TACAAAATACCCAAACATCA+GGG | + | chr4.3:22195178-22195197 | MS.gene40148:intron | 30.0% | |
| TAGAGGCCAAAATTTCATTA+CGG | - | chr4.3:22196570-22196589 | None:intergenic | 30.0% | |
| TATACTCATTGATGTCATCA+TGG | + | chr4.3:22196894-22196913 | MS.gene40148:intron | 30.0% | |
| TCAAATATACGTGAAAAACG+TGG | - | chr4.3:22198643-22198662 | None:intergenic | 30.0% | |
| TCCTACTTAACAAATGTTCT+TGG | + | chr4.3:22196156-22196175 | MS.gene40148:intron | 30.0% | |
| TCTGAAAAGCTTATCAAAGA+AGG | + | chr4.3:22199660-22199679 | MS.gene40148:CDS | 30.0% | |
| TGTTGTCTAAATGACCATAA+TGG | + | chr4.3:22196622-22196641 | MS.gene40148:intron | 30.0% | |
| TTGTCACTCCATTATTCATT+TGG | + | chr4.3:22195740-22195759 | MS.gene40148:intron | 30.0% | |
| TTTCTGAACTGAAAAGCAAA+AGG | - | chr4.3:22195027-22195046 | None:intergenic | 30.0% | |
| ! | AAACTAGACTTAGGTTGTTT+GGG | + | chr4.3:22194374-22194393 | MS.gene40148:intron | 30.0% |
| ! | AGGAAAATCCTTTGAAAGAT+AGG | - | chr4.3:22199551-22199570 | None:intergenic | 30.0% |
| ! | ATTGATGTCATCATGGATTA+TGG | + | chr4.3:22196901-22196920 | MS.gene40148:intron | 30.0% |
| ! | GACAACAATTTGAAACTGAA+TGG | - | chr4.3:22198807-22198826 | None:intergenic | 30.0% |
| ! | GACACATGCAAATTCTTTTT+GGG | - | chr4.3:22197633-22197652 | None:intergenic | 30.0% |
| ! | TCCAAGAACATTTGTTAAGT+AGG | - | chr4.3:22196160-22196179 | None:intergenic | 30.0% |
| ! | TGACACATGCAAATTCTTTT+TGG | - | chr4.3:22197634-22197653 | None:intergenic | 30.0% |
| ! | TGACAGTTGTACAATCTTTT+TGG | + | chr4.3:22196815-22196834 | MS.gene40148:intron | 30.0% |
| ! | TGGTTTTTGATAGAACACTA+TGG | + | chr4.3:22194524-22194543 | MS.gene40148:intron | 30.0% |
| ! | TGTAGAAGATCTGAAACTAT+GGG | - | chr4.3:22195612-22195631 | None:intergenic | 30.0% |
| ! | TTCCTCATAAATGCTTTGAA+AGG | + | chr4.3:22199200-22199219 | MS.gene40148:CDS | 30.0% |
| ! | TTCCTTTCAAAGCATTTATG+AGG | - | chr4.3:22199205-22199224 | None:intergenic | 30.0% |
| ! | TTGCCTTATAATTTTACTGG+TGG | + | chr4.3:22196356-22196375 | MS.gene40148:intron | 30.0% |
| !! | AAGTTTGATTTTTACCCAAG+TGG | - | chr4.3:22198444-22198463 | None:intergenic | 30.0% |
| !! | AGTTTGATTTTTACCCAAGT+GGG | - | chr4.3:22198443-22198462 | None:intergenic | 30.0% |
| !! | CCAACAAAGCCATATTTTTA+TGG | - | chr4.3:22194158-22194177 | None:intergenic | 30.0% |
| !! | CCATAAAAATATGGCTTTGT+TGG | + | chr4.3:22194155-22194174 | MS.gene40148:intron | 30.0% |
| !! | TTATGGTGTAAGTTGGTAAA+TGG | + | chr4.3:22196918-22196937 | MS.gene40148:intron | 30.0% |
| !!! | AAAGCTTGTTTTTAAGCATC+TGG | - | chr4.3:22195545-22195564 | None:intergenic | 30.0% |
| !!! | CGCTATTGAAGTAGTTTTAT+AGG | + | chr4.3:22197865-22197884 | MS.gene40148:intron | 30.0% |
| !!! | CTGTTACATTTTGGTGTTTA+AGG | - | chr4.3:22197155-22197174 | None:intergenic | 30.0% |
| !!! | CTTCTTTTAAGTTGACTACA+CGG | + | chr4.3:22195246-22195265 | MS.gene40148:intron | 30.0% |
| !!! | TTTTTTGCGTCTTTTACTAG+TGG | + | chr4.3:22193772-22193791 | MS.gene40148:intron | 30.0% |
| AAATGCAGTGAGATTAAGAG+AGG | - | chr4.3:22195505-22195524 | None:intergenic | 35.0% | |
| AACTACTTCAATAGCGAGAT+AGG | - | chr4.3:22197861-22197880 | None:intergenic | 35.0% | |
| AATCAAAAAAGCCACACATC+TGG | + | chr4.3:22196231-22196250 | MS.gene40148:intron | 35.0% | |
| ACTACAAGCTTGTGAAGTAA+AGG | - | chr4.3:22195378-22195397 | None:intergenic | 35.0% | |
| AGATGGTAGAAACTAGACTT+AGG | + | chr4.3:22194365-22194384 | MS.gene40148:intron | 35.0% | |
| ATATATAGGAATAGAGGGGA+TGG | + | chr4.3:22196847-22196866 | MS.gene40148:intron | 35.0% | |
| ATCAAGCAGTTGCTTGAAAA+GGG | + | chr4.3:22197388-22197407 | MS.gene40148:intron | 35.0% | |
| ATCCTGAATACTTCTCAAGT+TGG | - | chr4.3:22195970-22195989 | None:intergenic | 35.0% | |
| ATCTTAAACCTCATTGACCA+CGG | - | chr4.3:22198716-22198735 | None:intergenic | 35.0% | |
| ATGAAATGGTTGCAAATGTG+GGG | - | chr4.3:22195424-22195443 | None:intergenic | 35.0% | |
| ATGACATTAGGTAGAGAGTT+GGG | + | chr4.3:22194323-22194342 | MS.gene40148:intron | 35.0% | |
| ATGGTCATTTAGACAACACA+TGG | - | chr4.3:22196620-22196639 | None:intergenic | 35.0% | |
| CAAAATGACTTTCCTCATTC+AGG | - | chr4.3:22196320-22196339 | None:intergenic | 35.0% | |
| CAACCATTTCATCACTTGTT+GGG | + | chr4.3:22195432-22195451 | MS.gene40148:intron | 35.0% | |
| CCTCAAAACAAGTTAGTAAG+TGG | - | chr4.3:22195689-22195708 | None:intergenic | 35.0% | |
| CTACAAAATACCCAAACATC+AGG | + | chr4.3:22195177-22195196 | MS.gene40148:intron | 35.0% | |
| CTCTATCACATACACTTAAG+AGG | + | chr4.3:22196761-22196780 | MS.gene40148:intron | 35.0% | |
| CTGCTACAAATATATGAGCT+CGG | - | chr4.3:22199277-22199296 | None:intergenic | 35.0% | |
| GAACAGGATAGCAGAATAAA+TGG | - | chr4.3:22195715-22195734 | None:intergenic | 35.0% | |
| GAGAGGATGATGTTTATATG+TGG | - | chr4.3:22195089-22195108 | None:intergenic | 35.0% | |
| GATATGAAGCTTCACAAAAC+TGG | + | chr4.3:22196267-22196286 | MS.gene40148:intron | 35.0% | |
| GATGAAATGGTTGCAAATGT+GGG | - | chr4.3:22195425-22195444 | None:intergenic | 35.0% | |
| GGCAAATGCTATAAATTGCA+TGG | + | chr4.3:22195142-22195161 | MS.gene40148:intron | 35.0% | |
| GGTTAATGATGTTCAGTGAA+TGG | - | chr4.3:22198600-22198619 | None:intergenic | 35.0% | |
| GTATTGGACAAAATTCACTG+AGG | - | chr4.3:22194776-22194795 | None:intergenic | 35.0% | |
| GTGATACCTACTCTAACAAT+TGG | + | chr4.3:22199018-22199037 | MS.gene40148:CDS | 35.0% | |
| TAAATCATAACACGTCTCTG+CGG | - | chr4.3:22194633-22194652 | None:intergenic | 35.0% | |
| TAAGTAGGAGAACACTAGAA+TGG | - | chr4.3:22196145-22196164 | None:intergenic | 35.0% | |
| TATCCCAACAAGTGATGAAA+TGG | - | chr4.3:22195438-22195457 | None:intergenic | 35.0% | |
| TCCTGAATACTTCTCAAGTT+GGG | - | chr4.3:22195969-22195988 | None:intergenic | 35.0% | |
| TCTTCAAATACTCCAGAGTT+TGG | - | chr4.3:22199722-22199741 | None:intergenic | 35.0% | |
| TGACTATAAACGAACTCGAA+GGG | + | chr4.3:22198354-22198373 | MS.gene40148:CDS | 35.0% | |
| TGATAAACCTAACACACTCT+TGG | + | chr4.3:22194063-22194082 | MS.gene40148:intron | 35.0% | |
| TGATGAAATGGTTGCAAATG+TGG | - | chr4.3:22195426-22195445 | None:intergenic | 35.0% | |
| TGTACGAGAAACTATTAGGA+AGG | + | chr4.3:22194471-22194490 | MS.gene40148:intron | 35.0% | |
| TGTGCTTAAGAGATTGTGTT+TGG | - | chr4.3:22197741-22197760 | None:intergenic | 35.0% | |
| TTAGATTTGGCATCAAGACT+TGG | - | chr4.3:22195063-22195082 | None:intergenic | 35.0% | |
| TTCAATACACCTTTGATTGC+TGG | - | chr4.3:22198266-22198285 | None:intergenic | 35.0% | |
| TTCTACAGAGACTGAATATC+AGG | + | chr4.3:22195625-22195644 | MS.gene40148:intron | 35.0% | |
| TTGTTGGCCCCATAAAAATA+TGG | + | chr4.3:22194146-22194165 | MS.gene40148:intron | 35.0% | |
| ! | AAAGTTATGTTTCGGGTGAA+TGG | - | chr4.3:22193755-22193774 | None:intergenic | 35.0% |
| ! | AAATGAGTTGGAGAAAGACA+TGG | + | chr4.3:22194504-22194523 | MS.gene40148:intron | 35.0% |
| ! | ACTTGTTGATATTGAGTCAC+TGG | + | chr4.3:22197105-22197124 | MS.gene40148:intron | 35.0% |
| ! | AGGTGTTTCTGTAGCAAAAT+AGG | + | chr4.3:22194798-22194817 | MS.gene40148:intron | 35.0% |
| ! | ATCAGCATTAGTTTCTCCTA+AGG | + | chr4.3:22199573-22199592 | MS.gene40148:intron | 35.0% |
| ! | ATGGGCTTTTCTTTATCTGT+AGG | - | chr4.3:22195594-22195613 | None:intergenic | 35.0% |
| ! | ATGTTTGGGTATTTTGTAGC+TGG | - | chr4.3:22195176-22195195 | None:intergenic | 35.0% |
| ! | CGATAATTTGCGTTTCATTG+TGG | - | chr4.3:22193688-22193707 | None:intergenic | 35.0% |
| ! | CTGTAGAAGATCTGAAACTA+TGG | - | chr4.3:22195613-22195632 | None:intergenic | 35.0% |
| ! | GAAACTAGACTTAGGTTGTT+TGG | + | chr4.3:22194373-22194392 | MS.gene40148:intron | 35.0% |
| ! | GTGAATTTTGTCCAATACAC+AGG | + | chr4.3:22194778-22194797 | MS.gene40148:intron | 35.0% |
| ! | GTGTTGCTGGTGAATTAATT+TGG | + | chr4.3:22195658-22195677 | MS.gene40148:intron | 35.0% |
| ! | GTTTCTCGTACAGTTTTTCT+AGG | - | chr4.3:22194463-22194482 | None:intergenic | 35.0% |
| ! | TAAATTAGCCATTGATGGGT+AGG | - | chr4.3:22193974-22193993 | None:intergenic | 35.0% |
| ! | TAGAAATGATAATGAGGGCA+GGG | - | chr4.3:22198890-22198909 | None:intergenic | 35.0% |
| ! | TCATGGATTATGGTGTAAGT+TGG | + | chr4.3:22196911-22196930 | MS.gene40148:intron | 35.0% |
| ! | TGAAACTTTTGACCAAACTC+TGG | + | chr4.3:22199707-22199726 | MS.gene40148:CDS | 35.0% |
| ! | TGTTTGGGTATTTTGTAGCT+GGG | - | chr4.3:22195175-22195194 | None:intergenic | 35.0% |
| ! | TTAGAAATGATAATGAGGGC+AGG | - | chr4.3:22198891-22198910 | None:intergenic | 35.0% |
| !! | GCTTTGTTTATAGGAGGAAA+GGG | - | chr4.3:22194931-22194950 | None:intergenic | 35.0% |
| !! | GTCTCAAAACAAGAAGTACT+AGG | + | chr4.3:22197835-22197854 | MS.gene40148:intron | 35.0% |
| !!! | CATTGATTTTGACAGTTCAG+TGG | + | chr4.3:22195217-22195236 | MS.gene40148:intron | 35.0% |
| !!! | CCACTTACTAACTTGTTTTG+AGG | + | chr4.3:22195686-22195705 | MS.gene40148:intron | 35.0% |
| !!! | TCTTAAGCACATGTTTTGAC+CGG | + | chr4.3:22197750-22197769 | MS.gene40148:intron | 35.0% |
| AAACTCAACATCAGACCAGT+TGG | - | chr4.3:22198402-22198421 | None:intergenic | 40.0% | |
| AAGGAAAAACAGTGCGAAGT+TGG | + | chr4.3:22194970-22194989 | MS.gene40148:intron | 40.0% | |
| AATACTACTGTTAGAGACCC+AGG | + | chr4.3:22197421-22197440 | MS.gene40148:intron | 40.0% | |
| AATATCCTCGACATGAGTGA+TGG | - | chr4.3:22199252-22199271 | None:intergenic | 40.0% | |
| ACAAGTTCACATCCTGCTAT+AGG | - | chr4.3:22198052-22198071 | None:intergenic | 40.0% | |
| ACTGCCGCATTTGATAAACT+GGG | - | chr4.3:22193842-22193861 | None:intergenic | 40.0% | |
| AGATGTTAAGAGAGAGACCT+GGG | - | chr4.3:22197441-22197460 | None:intergenic | 40.0% | |
| AGTCAGATCACTAGAGTTAG+GGG | + | chr4.3:22194433-22194452 | MS.gene40148:intron | 40.0% | |
| ATCAAATGCGGCAGTATTAC+AGG | + | chr4.3:22193847-22193866 | MS.gene40148:CDS | 40.0% | |
| ATCATGGTGACACCGTAATT+TGG | - | chr4.3:22197800-22197819 | None:intergenic | 40.0% | |
| ATCCCATCTAGTGTTTCCAT+GGG | + | chr4.3:22199060-22199079 | MS.gene40148:CDS | 40.0% | |
| ATCGATTGACCCTGATGTTT+GGG | - | chr4.3:22195190-22195209 | None:intergenic | 40.0% | |
| ATCTTCAGTTGTCATCTGCT+TGG | + | chr4.3:22194207-22194226 | MS.gene40148:intron | 40.0% | |
| ATTCCCATGGAAACACTAGA+TGG | - | chr4.3:22199066-22199085 | None:intergenic | 40.0% | |
| ATTGTAAGGTACAGGCAGTA+TGG | - | chr4.3:22195326-22195345 | None:intergenic | 40.0% | |
| ATTTCGATCGTGTGGAACAT+TGG | - | chr4.3:22195774-22195793 | None:intergenic | 40.0% | |
| CATTTAGACAAGCCTGAATG+AGG | + | chr4.3:22196305-22196324 | MS.gene40148:intron | 40.0% | |
| CTACAGAAACACCTGTGTAT+TGG | - | chr4.3:22194792-22194811 | None:intergenic | 40.0% | |
| CTCATAGCACTGCAAAGTTT+GGG | + | chr4.3:22197974-22197993 | MS.gene40148:CDS | 40.0% | |
| CTTCTCCGTGAGTATTCAAA+AGG | + | chr4.3:22194951-22194970 | MS.gene40148:intron | 40.0% | |
| GAAGGACCAATTGTTAGAGT+AGG | - | chr4.3:22199027-22199046 | None:intergenic | 40.0% | |
| GAGAAGACTAGTAGATCAGA+TGG | + | chr4.3:22194405-22194424 | MS.gene40148:intron | 40.0% | |
| GAGACTGAATATCAGGCTAT+TGG | + | chr4.3:22195632-22195651 | MS.gene40148:intron | 40.0% | |
| GAGTCAGATCACTAGAGTTA+GGG | + | chr4.3:22194432-22194451 | MS.gene40148:intron | 40.0% | |
| GAGTCTTTGTGTATTGTCCT+TGG | - | chr4.3:22199138-22199157 | None:intergenic | 40.0% | |
| GATCAAGCAGTTGCTTGAAA+AGG | + | chr4.3:22197387-22197406 | MS.gene40148:intron | 40.0% | |
| GATGACATTAGGTAGAGAGT+TGG | + | chr4.3:22194322-22194341 | MS.gene40148:intron | 40.0% | |
| GATTATCAACTTTGCCTTGC+TGG | - | chr4.3:22199637-22199656 | None:intergenic | 40.0% | |
| GCAACCATTTCATCACTTGT+TGG | + | chr4.3:22195431-22195450 | MS.gene40148:intron | 40.0% | |
| GCAGAAAAAGAATCAGCTTC+TGG | + | chr4.3:22199293-22199312 | MS.gene40148:CDS | 40.0% | |
| GGAGAAACTAATGCTGATGA+AGG | - | chr4.3:22199571-22199590 | None:intergenic | 40.0% | |
| GGATACTTAAACACATTGCC+AGG | + | chr4.3:22195453-22195472 | MS.gene40148:intron | 40.0% | |
| GGGATATCTTGTGTTAGAGA+AGG | - | chr4.3:22199045-22199064 | None:intergenic | 40.0% | |
| GTGAATAAAATACCTCAGCC+TGG | - | chr4.3:22195474-22195493 | None:intergenic | 40.0% | |
| GTGACTATAAACGAACTCGA+AGG | + | chr4.3:22198353-22198372 | MS.gene40148:CDS | 40.0% | |
| GTTCGAAAATTCCAGATGTG+TGG | - | chr4.3:22196245-22196264 | None:intergenic | 40.0% | |
| GTTTAGCAATCAACCTACCT+CGG | - | chr4.3:22198116-22198135 | None:intergenic | 40.0% | |
| TAATGCTTGAGACTGAAGCA+CGG | - | chr4.3:22195291-22195310 | None:intergenic | 40.0% | |
| TACTGCCGCATTTGATAAAC+TGG | - | chr4.3:22193843-22193862 | None:intergenic | 40.0% | |
| TATAGCATTTGCCTTTGGTG+TGG | - | chr4.3:22195135-22195154 | None:intergenic | 40.0% | |
| TATCCCATCTAGTGTTTCCA+TGG | + | chr4.3:22199059-22199078 | MS.gene40148:CDS | 40.0% | |
| TCCTATTTCCTACCCATCAA+TGG | + | chr4.3:22193963-22193982 | MS.gene40148:intron | 40.0% | |
| TGACATTAGGTAGAGAGTTG+GGG | + | chr4.3:22194324-22194343 | MS.gene40148:intron | 40.0% | |
| TGACTTCAAGCTTACTCAGT+TGG | - | chr4.3:22199401-22199420 | None:intergenic | 40.0% | |
| TGCAAATGTGGGGTACAAAT+TGG | - | chr4.3:22195414-22195433 | None:intergenic | 40.0% | |
| TGGAGTGACAATCTAAGAAC+AGG | - | chr4.3:22195731-22195750 | None:intergenic | 40.0% | |
| TGTTAGAAGTGACATTCCCA+TGG | - | chr4.3:22199079-22199098 | None:intergenic | 40.0% | |
| TTCCCATGGAAACACTAGAT+GGG | - | chr4.3:22199065-22199084 | None:intergenic | 40.0% | |
| TTCTCAGCTTAGACAGTAAG+AGG | - | chr4.3:22195930-22195949 | None:intergenic | 40.0% | |
| TTGAGCGAATACAACTCTCT+TGG | + | chr4.3:22196108-22196127 | MS.gene40148:intron | 40.0% | |
| TTGTAAGGTACAGGCAGTAT+GGG | - | chr4.3:22195325-22195344 | None:intergenic | 40.0% | |
| TTTAGCAATCAACCTACCTC+GGG | - | chr4.3:22198115-22198134 | None:intergenic | 40.0% | |
| TTTGAACTTTGCAGCTTCAG+AGG | - | chr4.3:22199453-22199472 | None:intergenic | 40.0% | |
| ! | AAGAAGAAGGCATGTGTGAT+AGG | + | chr4.3:22197337-22197356 | MS.gene40148:intron | 40.0% |
| ! | AAGTCTTATCCCACTAAGTG+GGG | - | chr4.3:22194573-22194592 | None:intergenic | 40.0% |
| ! | ATGCCAAAAGGTGTATAGAG+AGG | - | chr4.3:22195106-22195125 | None:intergenic | 40.0% |
| ! | ATGGGAATGTCACTTCTAAC+AGG | + | chr4.3:22199078-22199097 | MS.gene40148:CDS | 40.0% |
| ! | ATTTGATGATTGCTCCAGCA+AGG | + | chr4.3:22199620-22199639 | MS.gene40148:CDS | 40.0% |
| ! | CAAGTCTTATCCCACTAAGT+GGG | - | chr4.3:22194574-22194593 | None:intergenic | 40.0% |
| ! | CATCCTCTCTATACACCTTT+TGG | + | chr4.3:22195100-22195119 | MS.gene40148:intron | 40.0% |
| ! | CTGGAGTATTTGAAGACTCA+GGG | + | chr4.3:22199726-22199745 | MS.gene40148:CDS | 40.0% |
| ! | CTTTTGAATACTCACGGAGA+AGG | - | chr4.3:22194953-22194972 | None:intergenic | 40.0% |
| ! | TATCGATTGACCCTGATGTT+TGG | - | chr4.3:22195191-22195210 | None:intergenic | 40.0% |
| ! | TCTGGAGTATTTGAAGACTC+AGG | + | chr4.3:22199725-22199744 | MS.gene40148:CDS | 40.0% |
| ! | TGGAGTATTTGAAGACTCAG+GGG | + | chr4.3:22199727-22199746 | MS.gene40148:CDS | 40.0% |
| ! | TTGATAACTGTCGCGGTAAA+TGG | + | chr4.3:22193880-22193899 | MS.gene40148:CDS | 40.0% |
| ! | TTGATTTTTACCCAAGTGGG+TGG | - | chr4.3:22198440-22198459 | None:intergenic | 40.0% |
| !! | ACGGAGAAGGCTTTGTTTAT+AGG | - | chr4.3:22194940-22194959 | None:intergenic | 40.0% |
| !! | CTCAAAAGTGCTAGCTGAAA+AGG | + | chr4.3:22198951-22198970 | MS.gene40148:CDS | 40.0% |
| !! | GAGAAGGCTTTGTTTATAGG+AGG | - | chr4.3:22194937-22194956 | None:intergenic | 40.0% |
| !! | GATTTTGATGCTCCTATAGC+AGG | + | chr4.3:22198037-22198056 | MS.gene40148:CDS | 40.0% |
| !! | GGACATGGAAATAGCTTTGT+TGG | + | chr4.3:22194130-22194149 | MS.gene40148:intron | 40.0% |
| !! | GGCTTTGTTTATAGGAGGAA+AGG | - | chr4.3:22194932-22194951 | None:intergenic | 40.0% |
| !! | GGGTACAAATTGGCTTTAGA+TGG | - | chr4.3:22195404-22195423 | None:intergenic | 40.0% |
| !! | GTTTTTAAGCATCTGGTGTC+TGG | - | chr4.3:22195538-22195557 | None:intergenic | 40.0% |
| !! | TCCCAACTTGAGAAGTATTC+AGG | + | chr4.3:22195965-22195984 | MS.gene40148:intron | 40.0% |
| !! | TGAGGTGATATACTGACTTG+AGG | - | chr4.3:22194733-22194752 | None:intergenic | 40.0% |
| AAACTGAGGAGTCTCTCTCA+AGG | + | chr4.3:22194704-22194723 | MS.gene40148:intron | 45.0% | |
| AAAGGAATGCAGATCCTGTC+AGG | + | chr4.3:22199218-22199237 | MS.gene40148:CDS | 45.0% | |
| AAGAGCAGAAACTGACTAGC+TGG | - | chr4.3:22195905-22195924 | None:intergenic | 45.0% | |
| AGAATCACTCAGAGTGACAG+AGG | + | chr4.3:22195862-22195881 | MS.gene40148:CDS | 45.0% | |
| AGTTCACAGGTGTAGCAAGT+TGG | - | chr4.3:22198078-22198097 | None:intergenic | 45.0% | |
| ATAAACGAACTCGAAGGGAC+TGG | + | chr4.3:22198359-22198378 | MS.gene40148:CDS | 45.0% | |
| ATTACAGTGGCACACTTCTC+CGG | - | chr4.3:22197772-22197791 | None:intergenic | 45.0% | |
| ATTTGAACACCTGAAAGCCG+TGG | + | chr4.3:22198696-22198715 | MS.gene40148:intron | 45.0% | |
| CAAACCCAAATCTCAAGTCG+AGG | + | chr4.3:22193935-22193954 | MS.gene40148:CDS | 45.0% | |
| CAGCCCCAGTTTATCAAATG+CGG | + | chr4.3:22193835-22193854 | MS.gene40148:intron | 45.0% | |
| CAGTATATCACCTCACTTCG+TGG | + | chr4.3:22194738-22194757 | MS.gene40148:intron | 45.0% | |
| CCAAACTTTGCAGTGCTATG+AGG | - | chr4.3:22197976-22197995 | None:intergenic | 45.0% | |
| CCACTTAGTGGGATAAGACT+TGG | + | chr4.3:22194572-22194591 | MS.gene40148:intron | 45.0% | |
| CCTCATAGCACTGCAAAGTT+TGG | + | chr4.3:22197973-22197992 | MS.gene40148:CDS | 45.0% | |
| CTGAGAAACTTAGCAAGCTC+AGG | - | chr4.3:22199353-22199372 | None:intergenic | 45.0% | |
| CTGCCGCATTTGATAAACTG+GGG | - | chr4.3:22193841-22193860 | None:intergenic | 45.0% | |
| GAAGGGTTCAGTTTCAAGCA+TGG | + | chr4.3:22199678-22199697 | MS.gene40148:CDS | 45.0% | |
| GACCTATAGCTCACAAAGTC+AGG | + | chr4.3:22194109-22194128 | MS.gene40148:intron | 45.0% | |
| GACTAGTAGATCAGATGGAG+AGG | + | chr4.3:22194410-22194429 | MS.gene40148:intron | 45.0% | |
| GAGATGTTAAGAGAGAGACC+TGG | - | chr4.3:22197442-22197461 | None:intergenic | 45.0% | |
| GATATCCATCACTCATGTCG+AGG | + | chr4.3:22199244-22199263 | MS.gene40148:CDS | 45.0% | |
| GCTATATGTAACCCATGTGC+AGG | + | chr4.3:22196187-22196206 | MS.gene40148:intron | 45.0% | |
| GGAGTCAGATCACTAGAGTT+AGG | + | chr4.3:22194431-22194450 | MS.gene40148:intron | 45.0% | |
| GTACATGATGTGCATCCTCA+TGG | + | chr4.3:22194848-22194867 | MS.gene40148:intron | 45.0% | |
| GTCCTGACTTTGTGAGCTAT+AGG | - | chr4.3:22194114-22194133 | None:intergenic | 45.0% | |
| GTGTGGCTAAAGATGCCAAA+AGG | - | chr4.3:22195118-22195137 | None:intergenic | 45.0% | |
| TAGCTCACAAAGTCAGGACA+TGG | + | chr4.3:22194115-22194134 | MS.gene40148:intron | 45.0% | |
| TCGAACACTTTGATGCACTC+TGG | + | chr4.3:22193712-22193731 | MS.gene40148:CDS | 45.0% | |
| TCTTGAGAGGCAAAGTTCAC+AGG | - | chr4.3:22198091-22198110 | None:intergenic | 45.0% | |
| TGATGTTGGGACTTCATCTG+AGG | - | chr4.3:22195836-22195855 | None:intergenic | 45.0% | |
| TGATTCTGCCAGCTGATGTT+GGG | - | chr4.3:22195849-22195868 | None:intergenic | 45.0% | |
| TTAAACACATTGCCAGGCTG+AGG | + | chr4.3:22195459-22195478 | MS.gene40148:intron | 45.0% | |
| TTGATTTCTCACGAGCTTCG+AGG | - | chr4.3:22196217-22196236 | None:intergenic | 45.0% | |
| TTTGGCATCAAGACTTGGCT+TGG | - | chr4.3:22195058-22195077 | None:intergenic | 45.0% | |
| ! | AAGAAGGCATGTGTGATAGG+TGG | + | chr4.3:22197340-22197359 | MS.gene40148:intron | 45.0% |
| ! | ACCAACCTCGACTTGAGATT+TGG | - | chr4.3:22193943-22193962 | None:intergenic | 45.0% |
| ! | AGGCTATTGGTTAGTGTTGC+TGG | + | chr4.3:22195645-22195664 | MS.gene40148:intron | 45.0% |
| ! | CCAACCTCGACTTGAGATTT+GGG | - | chr4.3:22193942-22193961 | None:intergenic | 45.0% |
| ! | CCAAGTCTTATCCCACTAAG+TGG | - | chr4.3:22194575-22194594 | None:intergenic | 45.0% |
| ! | CTCGACTTGAGATTTGGGTT+TGG | - | chr4.3:22193937-22193956 | None:intergenic | 45.0% |
| ! | GCCATTGATGGGTAGGAAAT+AGG | - | chr4.3:22193967-22193986 | None:intergenic | 45.0% |
| ! | GCTTTCTGGTGCCTTCAATT+TGG | - | chr4.3:22196422-22196441 | None:intergenic | 45.0% |
| ! | GGAGTATTTGAAGACTCAGG+GGG | + | chr4.3:22199728-22199747 | MS.gene40148:CDS | 45.0% |
| ! | GGTTCTCTTGATAACTGTCG+CGG | + | chr4.3:22193873-22193892 | MS.gene40148:CDS | 45.0% |
| ! | TGAGAAGCCAAGAGTGTGTT+AGG | - | chr4.3:22194073-22194092 | None:intergenic | 45.0% |
| ! | TGATGGATATCGAACCTGAC+AGG | - | chr4.3:22199235-22199254 | None:intergenic | 45.0% |
| ! | TTGGGTATTTTGTAGCTGGG+AGG | - | chr4.3:22195172-22195191 | None:intergenic | 45.0% |
| !! | CGAAGGGACTGGTCATATTA+TGG | + | chr4.3:22198370-22198389 | MS.gene40148:CDS | 45.0% |
| !!! | TCAGCTAGCACTTTTGAGAC+AGG | - | chr4.3:22198949-22198968 | None:intergenic | 45.0% |
| ATGCGGCAGTATTACAGGCT+TGG | + | chr4.3:22193852-22193871 | MS.gene40148:CDS | 50.0% | |
| ATGGCGTCGTTTGAGTCATG+TGG | + | chr4.3:22194543-22194562 | MS.gene40148:intron | 50.0% | |
| CCCAAATCTCAAGTCGAGGT+TGG | + | chr4.3:22193939-22193958 | MS.gene40148:intron | 50.0% | |
| GATGAAGTCCCAACATCAGC+TGG | + | chr4.3:22195838-22195857 | MS.gene40148:intron | 50.0% | |
| GGAGGAAAGGGACTGTTGAT+AGG | - | chr4.3:22194919-22194938 | None:intergenic | 50.0% | |
| GGCATCTTTAGCCACACCAA+AGG | + | chr4.3:22195121-22195140 | MS.gene40148:intron | 50.0% | |
| GTCGCGGTAAATGGAAAGCA+TGG | + | chr4.3:22193889-22193908 | MS.gene40148:CDS | 50.0% | |
| GTGATTCTGCCAGCTGATGT+TGG | - | chr4.3:22195850-22195869 | None:intergenic | 50.0% | |
| TGCTAGCTGAAAAGGCTGCA+TGG | + | chr4.3:22198959-22198978 | MS.gene40148:CDS | 50.0% | |
| TTCGAGGACTTCCTGCACAT+GGG | - | chr4.3:22196201-22196220 | None:intergenic | 50.0% | |
| ! | ACTGACTAGCTGGAAGGAAG+AGG | - | chr4.3:22195895-22195914 | None:intergenic | 50.0% |
| ! | GCAGAAACTGACTAGCTGGA+AGG | - | chr4.3:22195901-22195920 | None:intergenic | 50.0% |
| !!! | GATAGGTGGCACTGGTTTTG+TGG | + | chr4.3:22197354-22197373 | MS.gene40148:intron | 50.0% |
| ACACTGCAAAGCCACCCACT+TGG | + | chr4.3:22198426-22198445 | MS.gene40148:CDS | 55.0% | |
| ACCTACCTCGGGATCTTGAG+AGG | - | chr4.3:22198104-22198123 | None:intergenic | 55.0% | |
| ATGTGGCTGACCCCACTTAG+TGG | + | chr4.3:22194560-22194579 | MS.gene40148:intron | 55.0% | |
| CACCTCACTTCGTGGTCGTT+GGG | + | chr4.3:22194746-22194765 | MS.gene40148:intron | 55.0% | |
| CACTGCAAAGCCACCCACTT+GGG | + | chr4.3:22198427-22198446 | MS.gene40148:CDS | 55.0% | |
| CCTCATTGACCACGGCTTTC+AGG | - | chr4.3:22198708-22198727 | None:intergenic | 55.0% | |
| CCTGAAAGCCGTGGTCAATG+AGG | + | chr4.3:22198705-22198724 | MS.gene40148:intron | 55.0% | |
| CTTCGAGGACTTCCTGCACA+TGG | - | chr4.3:22196202-22196221 | None:intergenic | 55.0% | |
| CTTTGCCTCTCAAGATCCCG+AGG | + | chr4.3:22198096-22198115 | MS.gene40148:CDS | 55.0% | |
| GCATGTGTGATAGGTGGCAC+TGG | + | chr4.3:22197346-22197365 | MS.gene40148:intron | 55.0% | |
| TCACCTCACTTCGTGGTCGT+TGG | + | chr4.3:22194745-22194764 | MS.gene40148:intron | 55.0% | |
| TGTGGCTGACCCCACTTAGT+GGG | + | chr4.3:22194561-22194580 | MS.gene40148:intron | 55.0% | |
| TTCCCAACGACCACGAAGTG+AGG | - | chr4.3:22194751-22194770 | None:intergenic | 55.0% | |
| GCCTCTCAAGATCCCGAGGT+AGG | + | chr4.3:22198100-22198119 | MS.gene40148:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 22193657 | 22199764 | 22193657 | ID=MS.gene40148 |
| chr4.3 | mRNA | 22193657 | 22199764 | 22193657 | ID=MS.gene40148.t1;Parent=MS.gene40148 |
| chr4.3 | exon | 22193657 | 22193744 | 22193657 | ID=MS.gene40148.t1.exon1;Parent=MS.gene40148.t1 |
| chr4.3 | CDS | 22193657 | 22193744 | 22193657 | ID=cds.MS.gene40148.t1;Parent=MS.gene40148.t1 |
| chr4.3 | exon | 22193838 | 22193956 | 22193838 | ID=MS.gene40148.t1.exon2;Parent=MS.gene40148.t1 |
| chr4.3 | CDS | 22193838 | 22193956 | 22193838 | ID=cds.MS.gene40148.t1;Parent=MS.gene40148.t1 |
| chr4.3 | exon | 22195839 | 22195908 | 22195839 | ID=MS.gene40148.t1.exon3;Parent=MS.gene40148.t1 |
| chr4.3 | CDS | 22195839 | 22195908 | 22195839 | ID=cds.MS.gene40148.t1;Parent=MS.gene40148.t1 |
| chr4.3 | exon | 22197951 | 22198117 | 22197951 | ID=MS.gene40148.t1.exon4;Parent=MS.gene40148.t1 |
| chr4.3 | CDS | 22197951 | 22198117 | 22197951 | ID=cds.MS.gene40148.t1;Parent=MS.gene40148.t1 |
| chr4.3 | exon | 22198248 | 22198448 | 22198248 | ID=MS.gene40148.t1.exon5;Parent=MS.gene40148.t1 |
| chr4.3 | CDS | 22198248 | 22198448 | 22198248 | ID=cds.MS.gene40148.t1;Parent=MS.gene40148.t1 |
| chr4.3 | exon | 22198940 | 22199099 | 22198940 | ID=MS.gene40148.t1.exon6;Parent=MS.gene40148.t1 |
| chr4.3 | CDS | 22198940 | 22199099 | 22198940 | ID=cds.MS.gene40148.t1;Parent=MS.gene40148.t1 |
| chr4.3 | exon | 22199192 | 22199405 | 22199192 | ID=MS.gene40148.t1.exon7;Parent=MS.gene40148.t1 |
| chr4.3 | CDS | 22199192 | 22199405 | 22199192 | ID=cds.MS.gene40148.t1;Parent=MS.gene40148.t1 |
| chr4.3 | exon | 22199620 | 22199764 | 22199620 | ID=MS.gene40148.t1.exon8;Parent=MS.gene40148.t1 |
| chr4.3 | CDS | 22199620 | 22199764 | 22199620 | ID=cds.MS.gene40148.t1;Parent=MS.gene40148.t1 |
| Gene Sequence |
| Protein sequence |