Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40148.t1 | ADK95116.1 | 99.7 | 291 | 1 | 0 | 93 | 383 | 44 | 334 | 1.20E-159 | 572.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40148.t1 | D7U6G6 | 72.8 | 294 | 80 | 0 | 93 | 386 | 44 | 337 | 7.6e-126 | 451.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40148.t1 | E0AE70 | 99.7 | 291 | 1 | 0 | 93 | 383 | 44 | 334 | 8.8e-160 | 572.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene92810 | MS.gene40148 | PPI |
MS.gene27776 | MS.gene40148 | PPI |
MS.gene40148 | MS.gene92808 | PPI |
MS.gene40148 | MS.gene016248 | PPI |
MS.gene40148 | MS.gene27778 | PPI |
MS.gene40148 | MS.gene27554 | PPI |
MS.gene40148 | MS.gene27552 | PPI |
MS.gene40148 | MS.gene27550 | PPI |
MS.gene40148 | MS.gene27779 | PPI |
MS.gene92809 | MS.gene40148 | PPI |
MS.gene40148 | MS.gene56554 | PPI |
MS.gene40148 | MS.gene016245 | PPI |
MS.gene40148 | MS.gene016246 | PPI |
MS.gene031525 | MS.gene40148 | PPI |
MS.gene27553 | MS.gene40148 | PPI |
MS.gene40148 | MS.gene92812 | PPI |
MS.gene40148 | MS.gene27775 | PPI |
MS.gene27551 | MS.gene40148 | PPI |
MS.gene016249 | MS.gene40148 | PPI |
MS.gene006771 | MS.gene40148 | PPI |
MS.gene40148 | MS.gene92811 | PPI |
MS.gene40148 | MS.gene96808 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40148.t1 | MTR_4g092080 | 94.845 | 291 | 15 | 0 | 93 | 383 | 46 | 336 | 0.0 | 575 |
MS.gene40148.t1 | MTR_1g022440 | 40.741 | 297 | 165 | 4 | 93 | 387 | 40 | 327 | 6.61e-78 | 244 |
MS.gene40148.t1 | MTR_1g022445 | 43.003 | 293 | 156 | 4 | 97 | 387 | 44 | 327 | 2.08e-77 | 242 |
MS.gene40148.t1 | MTR_7g074820 | 39.427 | 279 | 160 | 4 | 109 | 385 | 58 | 329 | 1.51e-62 | 204 |
MS.gene40148.t1 | MTR_7g074880 | 37.276 | 279 | 163 | 4 | 109 | 385 | 58 | 326 | 9.99e-60 | 196 |
MS.gene40148.t1 | MTR_7g074730 | 35.971 | 278 | 168 | 3 | 110 | 385 | 59 | 328 | 1.00e-59 | 196 |
MS.gene40148.t1 | MTR_7g074850 | 37.276 | 279 | 166 | 3 | 109 | 385 | 58 | 329 | 6.53e-59 | 194 |
MS.gene40148.t1 | MTR_4g081440 | 37.370 | 289 | 172 | 3 | 97 | 376 | 57 | 345 | 2.75e-58 | 194 |
MS.gene40148.t1 | MTR_4g081440 | 37.793 | 299 | 156 | 6 | 97 | 376 | 53 | 340 | 5.40e-58 | 192 |
MS.gene40148.t1 | MTR_7g074870 | 36.299 | 281 | 163 | 4 | 109 | 385 | 20 | 288 | 1.80e-56 | 187 |
MS.gene40148.t1 | MTR_7g074710 | 35.125 | 279 | 169 | 3 | 109 | 385 | 58 | 326 | 2.89e-56 | 187 |
MS.gene40148.t1 | MTR_2g101330 | 35.052 | 291 | 175 | 8 | 97 | 385 | 41 | 319 | 1.30e-50 | 173 |
MS.gene40148.t1 | MTR_3g005210 | 37.282 | 287 | 164 | 7 | 97 | 380 | 42 | 315 | 1.95e-48 | 167 |
MS.gene40148.t1 | MTR_8g062440 | 37.906 | 277 | 156 | 6 | 91 | 364 | 39 | 302 | 6.29e-48 | 166 |
MS.gene40148.t1 | MTR_8g062110 | 36.860 | 293 | 167 | 8 | 91 | 380 | 40 | 317 | 7.94e-48 | 165 |
MS.gene40148.t1 | MTR_8g062110 | 36.860 | 293 | 167 | 8 | 91 | 380 | 49 | 326 | 9.24e-48 | 166 |
MS.gene40148.t1 | MTR_8g062440 | 37.500 | 272 | 154 | 6 | 91 | 360 | 39 | 296 | 2.72e-47 | 164 |
MS.gene40148.t1 | MTR_8g062440 | 38.267 | 277 | 154 | 7 | 91 | 364 | 39 | 301 | 3.77e-47 | 164 |
MS.gene40148.t1 | MTR_3g005170 | 36.177 | 293 | 171 | 7 | 93 | 382 | 42 | 321 | 4.42e-47 | 163 |
MS.gene40148.t1 | MTR_3g005170 | 39.113 | 248 | 137 | 5 | 93 | 338 | 42 | 277 | 4.63e-47 | 162 |
MS.gene40148.t1 | MTR_8g062110 | 38.956 | 249 | 136 | 6 | 91 | 337 | 40 | 274 | 6.36e-47 | 162 |
MS.gene40148.t1 | MTR_8g062110 | 38.956 | 249 | 136 | 6 | 91 | 337 | 40 | 274 | 7.44e-47 | 162 |
MS.gene40148.t1 | MTR_4g077100 | 38.571 | 280 | 150 | 8 | 91 | 364 | 42 | 305 | 1.78e-46 | 162 |
MS.gene40148.t1 | MTR_4g077130 | 37.857 | 280 | 152 | 8 | 91 | 364 | 40 | 303 | 2.73e-46 | 161 |
MS.gene40148.t1 | MTR_4g077100 | 40.000 | 250 | 135 | 6 | 91 | 338 | 42 | 278 | 8.64e-46 | 159 |
MS.gene40148.t1 | MTR_4g023730 | 31.690 | 284 | 174 | 5 | 109 | 385 | 59 | 329 | 7.68e-43 | 152 |
MS.gene40148.t1 | MTR_3g014200 | 92.754 | 69 | 5 | 0 | 1 | 69 | 1 | 69 | 1.80e-42 | 144 |
MS.gene40148.t1 | MTR_4g009040 | 35.811 | 296 | 165 | 10 | 97 | 386 | 48 | 324 | 1.57e-41 | 149 |
MS.gene40148.t1 | MTR_5g072620 | 32.890 | 301 | 176 | 9 | 93 | 385 | 37 | 319 | 2.06e-39 | 143 |
MS.gene40148.t1 | MTR_4g009040 | 35.333 | 300 | 165 | 11 | 97 | 386 | 48 | 328 | 2.38e-39 | 143 |
MS.gene40148.t1 | MTR_4g092090 | 93.220 | 59 | 4 | 0 | 11 | 69 | 11 | 69 | 9.63e-37 | 129 |
MS.gene40148.t1 | MTR_4g092090 | 93.220 | 59 | 4 | 0 | 11 | 69 | 23 | 81 | 1.07e-36 | 129 |
MS.gene40148.t1 | MTR_3g005170 | 35.833 | 240 | 139 | 6 | 145 | 382 | 64 | 290 | 1.30e-35 | 132 |
MS.gene40148.t1 | MTR_4g009690 | 35.254 | 295 | 167 | 9 | 97 | 386 | 48 | 323 | 1.95e-35 | 132 |
MS.gene40148.t1 | MTR_2g013230 | 28.772 | 285 | 194 | 5 | 109 | 385 | 57 | 340 | 2.21e-35 | 133 |
MS.gene40148.t1 | MTR_5g056600 | 29.831 | 295 | 186 | 9 | 97 | 385 | 40 | 319 | 3.39e-35 | 132 |
MS.gene40148.t1 | MTR_2g104960 | 35.959 | 292 | 167 | 10 | 97 | 385 | 55 | 329 | 1.00e-34 | 131 |
MS.gene40148.t1 | MTR_3g031650 | 31.208 | 298 | 175 | 9 | 96 | 383 | 40 | 317 | 1.45e-34 | 130 |
MS.gene40148.t1 | MTR_2g028620 | 31.419 | 296 | 181 | 11 | 99 | 387 | 48 | 328 | 9.33e-34 | 128 |
MS.gene40148.t1 | MTR_4g009690 | 35.135 | 296 | 167 | 10 | 97 | 386 | 48 | 324 | 1.14e-33 | 128 |
MS.gene40148.t1 | MTR_4g006940 | 33.219 | 292 | 175 | 9 | 97 | 385 | 52 | 326 | 2.96e-33 | 127 |
MS.gene40148.t1 | MTR_2g013260 | 29.123 | 285 | 189 | 6 | 109 | 383 | 57 | 338 | 3.22e-33 | 127 |
MS.gene40148.t1 | MTR_2g028620 | 33.333 | 243 | 146 | 8 | 99 | 337 | 48 | 278 | 1.18e-32 | 125 |
MS.gene40148.t1 | MTR_4g006940 | 35.102 | 245 | 142 | 6 | 97 | 340 | 52 | 280 | 1.77e-32 | 123 |
MS.gene40148.t1 | MTR_4g006940 | 35.102 | 245 | 142 | 6 | 97 | 340 | 52 | 280 | 1.77e-32 | 123 |
MS.gene40148.t1 | MTR_7g117190 | 28.669 | 293 | 193 | 6 | 105 | 385 | 52 | 340 | 6.65e-32 | 123 |
MS.gene40148.t1 | MTR_3g031650 | 31.325 | 249 | 147 | 6 | 96 | 337 | 40 | 271 | 1.37e-31 | 121 |
MS.gene40148.t1 | MTR_8g062110 | 34.764 | 233 | 136 | 6 | 150 | 380 | 13 | 231 | 1.52e-31 | 120 |
MS.gene40148.t1 | MTR_2g013250 | 28.014 | 282 | 194 | 5 | 110 | 383 | 57 | 337 | 2.76e-31 | 122 |
MS.gene40148.t1 | MTR_8g062110 | 36.649 | 191 | 107 | 4 | 148 | 337 | 11 | 188 | 9.88e-31 | 116 |
MS.gene40148.t1 | MTR_2g013260 | 30.672 | 238 | 153 | 5 | 110 | 337 | 58 | 293 | 5.12e-29 | 114 |
MS.gene40148.t1 | MTR_7g117190 | 29.317 | 249 | 161 | 5 | 105 | 341 | 52 | 297 | 1.75e-27 | 110 |
MS.gene40148.t1 | MTR_2g013230 | 28.033 | 239 | 163 | 5 | 155 | 385 | 13 | 250 | 4.86e-27 | 108 |
MS.gene40148.t1 | MTR_2g013260 | 28.452 | 239 | 158 | 6 | 155 | 383 | 32 | 267 | 2.25e-24 | 101 |
MS.gene40148.t1 | MTR_7g117190 | 28.017 | 232 | 151 | 6 | 166 | 385 | 3 | 230 | 2.16e-21 | 92.4 |
MS.gene40148.t1 | MTR_3g011130 | 41.176 | 119 | 65 | 4 | 151 | 267 | 30 | 145 | 1.36e-16 | 76.6 |
MS.gene40148.t1 | MTR_0685s0030 | 33.553 | 152 | 85 | 3 | 217 | 364 | 3 | 142 | 4.44e-16 | 75.5 |
MS.gene40148.t1 | MTR_0685s0030 | 35.246 | 122 | 70 | 1 | 217 | 338 | 3 | 115 | 2.11e-15 | 72.4 |
MS.gene40148.t1 | MTR_0164s0070 | 36.283 | 113 | 68 | 4 | 96 | 204 | 40 | 152 | 1.98e-14 | 72.0 |
MS.gene40148.t1 | MTR_6g406250 | 28.767 | 219 | 120 | 9 | 110 | 314 | 104 | 300 | 4.78e-14 | 73.2 |
MS.gene40148.t1 | MTR_5g029990 | 25.573 | 262 | 169 | 8 | 109 | 365 | 57 | 297 | 1.86e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40148.t1 | AT1G61720 | 59.122 | 296 | 120 | 1 | 91 | 386 | 44 | 338 | 2.45e-121 | 355 |
MS.gene40148.t1 | AT5G42800 | 41.414 | 297 | 162 | 5 | 91 | 385 | 39 | 325 | 1.73e-77 | 244 |
MS.gene40148.t1 | AT4G35420 | 38.514 | 296 | 168 | 7 | 91 | 385 | 39 | 321 | 1.93e-58 | 193 |
MS.gene40148.t1 | AT4G27250 | 38.710 | 279 | 160 | 5 | 110 | 377 | 60 | 338 | 5.49e-55 | 185 |
MS.gene40148.t1 | AT4G27250 | 38.351 | 279 | 151 | 7 | 110 | 377 | 60 | 328 | 5.77e-51 | 174 |
MS.gene40148.t1 | AT1G51410 | 35.350 | 314 | 179 | 9 | 80 | 386 | 28 | 324 | 1.90e-48 | 167 |
MS.gene40148.t1 | AT2G45400 | 33.224 | 304 | 189 | 6 | 89 | 385 | 11 | 307 | 5.67e-48 | 165 |
MS.gene40148.t1 | AT2G45400 | 33.571 | 280 | 175 | 4 | 110 | 385 | 92 | 364 | 5.60e-47 | 164 |
MS.gene40148.t1 | AT1G09510 | 40.336 | 238 | 128 | 5 | 97 | 332 | 44 | 269 | 6.56e-46 | 160 |
MS.gene40148.t1 | AT1G09490 | 37.402 | 254 | 143 | 6 | 87 | 337 | 3 | 243 | 2.70e-43 | 152 |
MS.gene40148.t1 | AT5G19440 | 35.172 | 290 | 172 | 7 | 97 | 383 | 46 | 322 | 3.21e-43 | 153 |
MS.gene40148.t1 | AT1G09490 | 38.525 | 244 | 134 | 6 | 97 | 337 | 44 | 274 | 2.00e-42 | 151 |
MS.gene40148.t1 | AT1G09480 | 39.574 | 235 | 126 | 6 | 97 | 328 | 44 | 265 | 6.40e-42 | 150 |
MS.gene40148.t1 | AT1G09480 | 39.574 | 235 | 126 | 6 | 97 | 328 | 91 | 312 | 1.40e-41 | 150 |
MS.gene40148.t1 | AT2G33600 | 37.024 | 289 | 164 | 9 | 91 | 377 | 40 | 312 | 2.02e-41 | 148 |
MS.gene40148.t1 | AT1G66800 | 35.154 | 293 | 162 | 9 | 97 | 382 | 44 | 315 | 2.25e-41 | 148 |
MS.gene40148.t1 | AT2G33590 | 35.336 | 283 | 167 | 8 | 97 | 377 | 44 | 312 | 4.24e-41 | 147 |
MS.gene40148.t1 | AT2G45400 | 34.764 | 233 | 142 | 3 | 110 | 339 | 92 | 317 | 2.63e-40 | 145 |
MS.gene40148.t1 | AT1G09500 | 37.705 | 244 | 127 | 7 | 97 | 332 | 44 | 270 | 4.48e-39 | 141 |
MS.gene40148.t1 | AT1G09500 | 37.705 | 244 | 127 | 7 | 97 | 332 | 10 | 236 | 6.23e-39 | 141 |
MS.gene40148.t1 | AT2G02400 | 31.313 | 297 | 174 | 11 | 99 | 385 | 42 | 318 | 8.25e-39 | 141 |
MS.gene40148.t1 | AT1G09500 | 36.187 | 257 | 139 | 7 | 97 | 345 | 44 | 283 | 1.22e-38 | 141 |
MS.gene40148.t1 | AT5G58490 | 32.867 | 286 | 154 | 10 | 97 | 361 | 45 | 313 | 1.09e-34 | 130 |
MS.gene40148.t1 | AT1G25460 | 28.826 | 281 | 183 | 6 | 109 | 385 | 52 | 319 | 1.33e-33 | 127 |
MS.gene40148.t1 | AT1G68540 | 29.682 | 283 | 177 | 10 | 110 | 385 | 54 | 321 | 1.35e-33 | 127 |
MS.gene40148.t1 | AT1G15950 | 36.694 | 248 | 140 | 7 | 97 | 343 | 48 | 279 | 6.12e-32 | 122 |
MS.gene40148.t1 | AT1G80820 | 34.247 | 292 | 172 | 10 | 97 | 385 | 43 | 317 | 3.63e-31 | 121 |
MS.gene40148.t1 | AT1G76470 | 32.765 | 293 | 185 | 7 | 97 | 387 | 42 | 324 | 5.34e-31 | 120 |
MS.gene40148.t1 | AT1G15950 | 34.247 | 292 | 172 | 10 | 97 | 385 | 48 | 322 | 1.19e-30 | 120 |
MS.gene40148.t1 | AT1G15950 | 34.247 | 292 | 172 | 10 | 97 | 385 | 48 | 322 | 1.19e-30 | 120 |
MS.gene40148.t1 | AT1G15950 | 35.055 | 271 | 157 | 9 | 97 | 364 | 48 | 302 | 7.26e-30 | 118 |
MS.gene40148.t1 | AT1G80820 | 36.327 | 245 | 139 | 7 | 97 | 340 | 43 | 271 | 1.46e-29 | 115 |
MS.gene40148.t1 | AT1G15950 | 35.918 | 245 | 140 | 7 | 97 | 340 | 48 | 276 | 2.04e-29 | 115 |
MS.gene40148.t1 | AT1G15950 | 36.066 | 244 | 139 | 7 | 97 | 339 | 48 | 275 | 3.64e-29 | 115 |
MS.gene40148.t1 | AT2G45400 | 35.976 | 164 | 102 | 2 | 110 | 270 | 92 | 255 | 9.66e-25 | 102 |
MS.gene40148.t1 | AT1G15950 | 32.489 | 237 | 145 | 7 | 151 | 385 | 1 | 224 | 1.06e-22 | 96.3 |
MS.gene40148.t1 | AT1G68540 | 27.193 | 228 | 147 | 8 | 163 | 385 | 1 | 214 | 5.86e-22 | 93.6 |
MS.gene40148.t1 | AT4G25315 | 62.319 | 69 | 25 | 1 | 1 | 69 | 1 | 68 | 9.62e-22 | 89.7 |
MS.gene40148.t1 | AT2G23910 | 32.075 | 159 | 94 | 4 | 156 | 314 | 69 | 213 | 2.50e-19 | 87.4 |
MS.gene40148.t1 | AT2G23910 | 32.075 | 159 | 94 | 4 | 156 | 314 | 103 | 247 | 3.75e-19 | 87.0 |
MS.gene40148.t1 | AT2G23910 | 32.075 | 159 | 94 | 4 | 156 | 314 | 103 | 247 | 4.29e-19 | 87.0 |
MS.gene40148.t1 | AT2G23910 | 32.075 | 159 | 94 | 4 | 156 | 314 | 103 | 247 | 4.48e-19 | 87.4 |
MS.gene40148.t1 | AT4G30470 | 28.495 | 186 | 113 | 6 | 130 | 314 | 80 | 246 | 1.30e-17 | 83.2 |
MS.gene40148.t1 | AT4G25315 | 47.727 | 88 | 26 | 2 | 1 | 69 | 1 | 87 | 9.74e-17 | 76.6 |
MS.gene40148.t1 | AT5G14700 | 29.231 | 195 | 113 | 8 | 129 | 314 | 127 | 305 | 2.19e-11 | 65.1 |
Find 71 sgRNAs with CRISPR-Local
Find 361 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGATAACTGTCGCGGTAAA+TGG | 0.205854 | 4.3:+22193880 | MS.gene40148:CDS |
GATTATCAACTTTGCCTTGC+TGG | 0.226247 | 4.3:-22199634 | None:intergenic |
TACTGCCGCATTTGATAAAC+TGG | 0.258041 | 4.3:-22193840 | None:intergenic |
ATCAAATGCGGCAGTATTAC+AGG | 0.275072 | 4.3:+22193847 | MS.gene40148:CDS |
CCTCATAGCACTGCAAAGTT+TGG | 0.275725 | 4.3:+22197973 | MS.gene40148:CDS |
CGAAGGGACTGGTCATATTA+TGG | 0.276006 | 4.3:+22198370 | MS.gene40148:CDS |
ACCAACCTCGACTTGAGATT+TGG | 0.293709 | 4.3:-22193940 | None:intergenic |
CCAACCTCGACTTGAGATTT+GGG | 0.322144 | 4.3:-22193939 | None:intergenic |
TTCAATACACCTTTGATTGC+TGG | 0.333253 | 4.3:-22198263 | None:intergenic |
TCTTCAAATACTCCAGAGTT+TGG | 0.365279 | 4.3:-22199719 | None:intergenic |
CTCGACTTGAGATTTGGGTT+TGG | 0.382849 | 4.3:-22193934 | None:intergenic |
TTCCTTTCAAAGCATTTATG+AGG | 0.388148 | 4.3:-22199202 | None:intergenic |
ATTCCCATGGAAACACTAGA+TGG | 0.394524 | 4.3:-22199063 | None:intergenic |
TCTGAAAAGCTTATCAAAGA+AGG | 0.411453 | 4.3:+22199660 | MS.gene40148:CDS |
CTCATAGCACTGCAAAGTTT+GGG | 0.415377 | 4.3:+22197974 | MS.gene40148:CDS |
TATCAAAATCTACTTCTTCA+AGG | 0.417228 | 4.3:-22199751 | None:intergenic |
ATGGGAATGTCACTTCTAAC+AGG | 0.424075 | 4.3:+22199078 | MS.gene40148:CDS |
CTCAAAAGTGCTAGCTGAAA+AGG | 0.425883 | 4.3:+22198951 | MS.gene40148:CDS |
GTGATACCTACTCTAACAAT+TGG | 0.428631 | 4.3:+22199018 | MS.gene40148:CDS |
ACAAGTTCACATCCTGCTAT+AGG | 0.437816 | 4.3:-22198049 | None:intergenic |
TGATTCTGCCAGCTGATGTT+GGG | 0.454233 | 4.3:-22195846 | None:intergenic |
AAAGGAATGCAGATCCTGTC+AGG | 0.463412 | 4.3:+22199218 | MS.gene40148:CDS |
CTGAGAAACTTAGCAAGCTC+AGG | 0.468414 | 4.3:-22199350 | None:intergenic |
GTGATTCTGCCAGCTGATGT+TGG | 0.472600 | 4.3:-22195847 | None:intergenic |
TATCCCATCTAGTGTTTCCA+TGG | 0.473150 | 4.3:+22199059 | MS.gene40148:CDS |
TTCCTCATAAATGCTTTGAA+AGG | 0.475020 | 4.3:+22199200 | MS.gene40148:CDS |
TGACTTCAAGCTTACTCAGT+TGG | 0.478141 | 4.3:-22199398 | None:intergenic |
ATGCGGCAGTATTACAGGCT+TGG | 0.485797 | 4.3:+22193852 | MS.gene40148:CDS |
CCAAACTTTGCAGTGCTATG+AGG | 0.494447 | 4.3:-22197973 | None:intergenic |
GATGAAGTCCCAACATCAGC+TGG | 0.502526 | 4.3:+22195838 | MS.gene40148:intron |
ATATTATGGATGAAACCAAC+TGG | 0.503991 | 4.3:+22198384 | MS.gene40148:CDS |
CTGAAAAGCTTATCAAAGAA+GGG | 0.506098 | 4.3:+22199661 | MS.gene40148:CDS |
TCTTGAGAGGCAAAGTTCAC+AGG | 0.513934 | 4.3:-22198088 | None:intergenic |
CGATAATTTGCGTTTCATTG+TGG | 0.520266 | 4.3:-22193685 | None:intergenic |
CACTGCAAAGCCACCCACTT+GGG | 0.520500 | 4.3:+22198427 | MS.gene40148:CDS |
TCTGGAGTATTTGAAGACTC+AGG | 0.526497 | 4.3:+22199725 | MS.gene40148:CDS |
CTGCTACAAATATATGAGCT+CGG | 0.536593 | 4.3:-22199274 | None:intergenic |
TGCTAGCTGAAAAGGCTGCA+TGG | 0.537823 | 4.3:+22198959 | MS.gene40148:CDS |
TGATGGATATCGAACCTGAC+AGG | 0.542607 | 4.3:-22199232 | None:intergenic |
TCGAACACTTTGATGCACTC+TGG | 0.542742 | 4.3:+22193712 | MS.gene40148:CDS |
CTGGAGTATTTGAAGACTCA+GGG | 0.551188 | 4.3:+22199726 | MS.gene40148:CDS |
AGTTCACAGGTGTAGCAAGT+TGG | 0.553446 | 4.3:-22198075 | None:intergenic |
GAAGGACCAATTGTTAGAGT+AGG | 0.556874 | 4.3:-22199024 | None:intergenic |
AAACTCAACATCAGACCAGT+TGG | 0.559402 | 4.3:-22198399 | None:intergenic |
ACTGACTAGCTGGAAGGAAG+AGG | 0.561724 | 4.3:-22195892 | None:intergenic |
ATGATAAAACCAGCAATCAA+AGG | 0.568131 | 4.3:+22198254 | MS.gene40148:CDS |
ACACTGCAAAGCCACCCACT+TGG | 0.573692 | 4.3:+22198426 | MS.gene40148:CDS |
AATATCCTCGACATGAGTGA+TGG | 0.579257 | 4.3:-22199249 | None:intergenic |
GTCGCGGTAAATGGAAAGCA+TGG | 0.579467 | 4.3:+22193889 | MS.gene40148:CDS |
TGTAGTTATGTCGTCAGAGA+AGG | 0.583277 | 4.3:+22193650 | None:intergenic |
ATAAACGAACTCGAAGGGAC+TGG | 0.592956 | 4.3:+22198359 | MS.gene40148:CDS |
ATTTGATGATTGCTCCAGCA+AGG | 0.593062 | 4.3:+22199620 | MS.gene40148:CDS |
ATCCCATCTAGTGTTTCCAT+GGG | 0.594221 | 4.3:+22199060 | MS.gene40148:CDS |
GGGATATCTTGTGTTAGAGA+AGG | 0.600247 | 4.3:-22199042 | None:intergenic |
GAAGGGTTCAGTTTCAAGCA+TGG | 0.601008 | 4.3:+22199678 | MS.gene40148:CDS |
ACCTACCTCGGGATCTTGAG+AGG | 0.609339 | 4.3:-22198101 | None:intergenic |
GGTTCTCTTGATAACTGTCG+CGG | 0.618772 | 4.3:+22193873 | MS.gene40148:CDS |
TTCCCATGGAAACACTAGAT+GGG | 0.620353 | 4.3:-22199062 | None:intergenic |
GTGACTATAAACGAACTCGA+AGG | 0.630121 | 4.3:+22198353 | MS.gene40148:CDS |
ACTGCCGCATTTGATAAACT+GGG | 0.632430 | 4.3:-22193839 | None:intergenic |
TGACTATAAACGAACTCGAA+GGG | 0.632588 | 4.3:+22198354 | MS.gene40148:CDS |
CTTTGCCTCTCAAGATCCCG+AGG | 0.635384 | 4.3:+22198096 | MS.gene40148:CDS |
TGTTAGAAGTGACATTCCCA+TGG | 0.640999 | 4.3:-22199076 | None:intergenic |
CAGCCCCAGTTTATCAAATG+CGG | 0.642365 | 4.3:+22193835 | MS.gene40148:intron |
GATATCCATCACTCATGTCG+AGG | 0.645745 | 4.3:+22199244 | MS.gene40148:CDS |
GCAGAAACTGACTAGCTGGA+AGG | 0.647146 | 4.3:-22195898 | None:intergenic |
AGAATCACTCAGAGTGACAG+AGG | 0.659658 | 4.3:+22195862 | MS.gene40148:CDS |
GGAGTATTTGAAGACTCAGG+GGG | 0.662530 | 4.3:+22199728 | MS.gene40148:CDS |
CAAACCCAAATCTCAAGTCG+AGG | 0.664433 | 4.3:+22193935 | MS.gene40148:CDS |
TGGAGTATTTGAAGACTCAG+GGG | 0.686930 | 4.3:+22199727 | MS.gene40148:CDS |
CTGCCGCATTTGATAAACTG+GGG | 0.687116 | 4.3:-22193838 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTAGTATAATAGTAAAAAA+TGG | + | chr4.3:22197054-22197073 | MS.gene40148:intron | 10.0% |
!! | CATATATATATATAATTGTA+AGG | - | chr4.3:22195340-22195359 | None:intergenic | 10.0% |
!!! | TATATTAATTTGTTTGATTA+CGG | + | chr4.3:22195995-22196014 | MS.gene40148:intron | 10.0% |
!! | AATTTGGTATAAACTTTATT+TGG | - | chr4.3:22196406-22196425 | None:intergenic | 15.0% |
!! | ATATGTTCAAAATCTTTAAA+GGG | + | chr4.3:22193995-22194014 | MS.gene40148:intron | 15.0% |
!! | CTTCAAAAATTAATTCAATT+AGG | - | chr4.3:22198166-22198185 | None:intergenic | 15.0% |
!! | TATATGTTCAAAATCTTTAA+AGG | + | chr4.3:22193994-22194013 | MS.gene40148:intron | 15.0% |
!! | TGCAATTCATATATATATTA+TGG | - | chr4.3:22198780-22198799 | None:intergenic | 15.0% |
!!! | AAACAGTTTTTAACTTTTTA+TGG | - | chr4.3:22197244-22197263 | None:intergenic | 15.0% |
!!! | AGATTATTTTGACATAAAAT+GGG | + | chr4.3:22198478-22198497 | MS.gene40148:intron | 15.0% |
!!! | CACACAATATTTTAATATTT+TGG | - | chr4.3:22197529-22197548 | None:intergenic | 15.0% |
!! | AATCCTTAAACCATTTAATT+TGG | - | chr4.3:22199114-22199133 | None:intergenic | 20.0% |
!! | ATAACCATTTAAATTGTTGT+CGG | - | chr4.3:22198514-22198533 | None:intergenic | 20.0% |
!! | ATAGTAAAAAATGGAAAATC+AGG | + | chr4.3:22197063-22197082 | MS.gene40148:intron | 20.0% |
!! | ATATATAAATTAGCCATTGA+TGG | - | chr4.3:22193979-22193998 | None:intergenic | 20.0% |
!! | TAAAATTGAATACATGGTTA+TGG | + | chr4.3:22198540-22198559 | MS.gene40148:intron | 20.0% |
!! | TAAAGTTTATACCAAATTGA+AGG | + | chr4.3:22196408-22196427 | MS.gene40148:intron | 20.0% |
!! | TATATAAATTAGCCATTGAT+GGG | - | chr4.3:22193978-22193997 | None:intergenic | 20.0% |
!! | TATATATAATTGTAAGGTAC+AGG | - | chr4.3:22195334-22195353 | None:intergenic | 20.0% |
!! | TATGGTTAAGATTTCAAATA+AGG | + | chr4.3:22198558-22198577 | MS.gene40148:intron | 20.0% |
!! | TCTGCTCATAAATTTAATAA+TGG | + | chr4.3:22196941-22196960 | MS.gene40148:intron | 20.0% |
!! | TTTGGTAAAGAACAATATAT+AGG | + | chr4.3:22196833-22196852 | MS.gene40148:intron | 20.0% |
!!! | ATCTCAATTTTATATTTTGC+AGG | + | chr4.3:22199170-22199189 | MS.gene40148:intron | 20.0% |
!!! | ATTTTCATTCTTATTTTCTG+CGG | + | chr4.3:22196445-22196464 | MS.gene40148:intron | 20.0% |
!!! | ATTTTTGAAGTATATGCATT+TGG | + | chr4.3:22198176-22198195 | MS.gene40148:intron | 20.0% |
!!! | CAGATTATTTTGACATAAAA+TGG | + | chr4.3:22198477-22198496 | MS.gene40148:intron | 20.0% |
!!! | CATTTTATGTCAAAATAATC+TGG | - | chr4.3:22198479-22198498 | None:intergenic | 20.0% |
!!! | TAGATCAATGTTATTTTCTT+CGG | - | chr4.3:22198992-22199011 | None:intergenic | 20.0% |
!!! | TCGTGTTTAATTTTTTTCAA+TGG | + | chr4.3:22198735-22198754 | MS.gene40148:intron | 20.0% |
!!! | TCTTTGAAATTTATCCATTA+TGG | - | chr4.3:22196639-22196658 | None:intergenic | 20.0% |
!!! | TTATTGCCTTATAATTTTAC+TGG | + | chr4.3:22196353-22196372 | MS.gene40148:intron | 20.0% |
!!! | TTTTAACCGTAATGAAATTT+TGG | + | chr4.3:22196561-22196580 | MS.gene40148:intron | 20.0% |
! | AAAAAATGAAACTTTGCCTT+AGG | - | chr4.3:22199592-22199611 | None:intergenic | 25.0% |
! | AAACATTTCTAATAGCTTAG+AGG | + | chr4.3:22196697-22196716 | MS.gene40148:intron | 25.0% |
! | AAACCACCAGTAAAATTATA+AGG | - | chr4.3:22196362-22196381 | None:intergenic | 25.0% |
! | AAATTATCATCAAAATGTGC+AGG | + | chr4.3:22198918-22198937 | MS.gene40148:intron | 25.0% |
! | AACAATATATAGGAATAGAG+GGG | + | chr4.3:22196843-22196862 | MS.gene40148:intron | 25.0% |
! | AATGATTATTTCATAGTGCT+CGG | + | chr4.3:22199490-22199509 | MS.gene40148:intron | 25.0% |
! | AATTATCATCAAAATGTGCA+GGG | + | chr4.3:22198919-22198938 | MS.gene40148:intron | 25.0% |
! | ACACAAACTTTATCAATACT+GGG | - | chr4.3:22193803-22193822 | None:intergenic | 25.0% |
! | ACGGTTATGTTAATTATTAG+TGG | + | chr4.3:22196014-22196033 | MS.gene40148:intron | 25.0% |
! | ACTAAAGACCAAATGAATAA+TGG | - | chr4.3:22195751-22195770 | None:intergenic | 25.0% |
! | AGAACAATATATAGGAATAG+AGG | + | chr4.3:22196841-22196860 | MS.gene40148:intron | 25.0% |
! | ATACAATTGAATGAAGATAG+AGG | - | chr4.3:22196587-22196606 | None:intergenic | 25.0% |
! | ATACATTACCTATCTTTCAA+AGG | + | chr4.3:22199540-22199559 | MS.gene40148:intron | 25.0% |
! | ATCATTTATGTACTCAACTT+AGG | + | chr4.3:22198856-22198875 | MS.gene40148:intron | 25.0% |
! | ATGAGTATATCTTGAAAAGT+TGG | - | chr4.3:22196883-22196902 | None:intergenic | 25.0% |
! | CAAACAAATAGAAAAGAAGA+AGG | + | chr4.3:22197324-22197343 | MS.gene40148:intron | 25.0% |
! | CATATATATATTATGGTCAG+TGG | - | chr4.3:22198773-22198792 | None:intergenic | 25.0% |
! | CGATAAATTTGACAAAATCA+TGG | - | chr4.3:22197816-22197835 | None:intergenic | 25.0% |
! | GAACAATATATAGGAATAGA+GGG | + | chr4.3:22196842-22196861 | MS.gene40148:intron | 25.0% |
! | GAATTAGAAATGATGACATT+AGG | + | chr4.3:22194311-22194330 | MS.gene40148:intron | 25.0% |
! | GAGTGTAAATTAACATATGA+TGG | + | chr4.3:22197294-22197313 | MS.gene40148:intron | 25.0% |
! | GATGTTAAATAGAGTAGTTA+TGG | - | chr4.3:22196742-22196761 | None:intergenic | 25.0% |
! | GGGTATATTTCATTGTTAAA+AGG | - | chr4.3:22194662-22194681 | None:intergenic | 25.0% |
! | GGTTAAATATTCTTTGAACT+TGG | + | chr4.3:22194016-22194035 | MS.gene40148:intron | 25.0% |
! | TAAGGACAAATAGAACAAAA+AGG | - | chr4.3:22194043-22194062 | None:intergenic | 25.0% |
! | TAATTTGGTCAAAATTACAG+TGG | - | chr4.3:22197785-22197804 | None:intergenic | 25.0% |
! | TACACTTGAACTAATGTATT+TGG | - | chr4.3:22194272-22194291 | None:intergenic | 25.0% |
! | TATTATCTTGGATGAAATGA+TGG | - | chr4.3:22195810-22195829 | None:intergenic | 25.0% |
! | TCAACTGAAAATAAAAACTG+AGG | + | chr4.3:22194690-22194709 | MS.gene40148:intron | 25.0% |
! | TGAAAAACAGCCAAATTAAA+TGG | + | chr4.3:22199101-22199120 | MS.gene40148:intron | 25.0% |
! | TGAATTAGCGATTAAAAAAC+TGG | - | chr4.3:22197555-22197574 | None:intergenic | 25.0% |
! | TTCAAATTGTTGTCGATATT+TGG | + | chr4.3:22198813-22198832 | MS.gene40148:intron | 25.0% |
!! | AGATTTCAAATAAGGTATCA+TGG | + | chr4.3:22198566-22198585 | MS.gene40148:intron | 25.0% |
!! | ATTTTCAGTTGAAAGATACA+GGG | - | chr4.3:22194682-22194701 | None:intergenic | 25.0% |
!! | CAAAACAAACTGTTACATTT+TGG | - | chr4.3:22197164-22197183 | None:intergenic | 25.0% |
!! | CCAATTAGAAATGATAATGA+GGG | - | chr4.3:22198895-22198914 | None:intergenic | 25.0% |
!! | GCAGTTTAAAATTGAATACA+TGG | + | chr4.3:22198534-22198553 | MS.gene40148:intron | 25.0% |
!! | TAACGAATTATTTGAAGTGT+TGG | + | chr4.3:22196969-22196988 | MS.gene40148:intron | 25.0% |
!! | TATTTTCAGTTGAAAGATAC+AGG | - | chr4.3:22194683-22194702 | None:intergenic | 25.0% |
!! | TCCAATTAGAAATGATAATG+AGG | - | chr4.3:22198896-22198915 | None:intergenic | 25.0% |
!! | TGTCTGATATTCATTTTCAT+AGG | + | chr4.3:22196538-22196557 | MS.gene40148:intron | 25.0% |
!! | TTATATGTGGCTTTTAGATT+TGG | - | chr4.3:22195076-22195095 | None:intergenic | 25.0% |
!! | TTTTTCCTTTTGAATACTCA+CGG | - | chr4.3:22194959-22194978 | None:intergenic | 25.0% |
!!! | AACAAAGCCATATTTTTATG+GGG | - | chr4.3:22194156-22194175 | None:intergenic | 25.0% |
!!! | CAACAAAGCCATATTTTTAT+GGG | - | chr4.3:22194157-22194176 | None:intergenic | 25.0% |
!!! | CTGTAATTTTGACCAAATTA+CGG | + | chr4.3:22197785-22197804 | MS.gene40148:intron | 25.0% |
!!! | GTTTTTTAATCGCTAATTCA+TGG | + | chr4.3:22197555-22197574 | MS.gene40148:intron | 25.0% |
!!! | TTACGAATTTTTTATCCATG+AGG | - | chr4.3:22194866-22194885 | None:intergenic | 25.0% |
AAACTGTACGAGAAACTATT+AGG | + | chr4.3:22194467-22194486 | MS.gene40148:intron | 30.0% | |
AAATGGTTTAAGGATTTCCA+AGG | + | chr4.3:22199118-22199137 | MS.gene40148:intron | 30.0% | |
AACTGAAGATCAAATGACTT+TGG | - | chr4.3:22194197-22194216 | None:intergenic | 30.0% | |
AAGTGTAATTTACTGTAGAC+GGG | + | chr4.3:22194285-22194304 | MS.gene40148:intron | 30.0% | |
AATTCTGAATTGAGAAGACT+TGG | + | chr4.3:22196481-22196500 | MS.gene40148:intron | 30.0% | |
ACGCAAAAAAGTTATGTTTC+GGG | - | chr4.3:22193762-22193781 | None:intergenic | 30.0% | |
ACGTATATTTGAACACAGTT+TGG | + | chr4.3:22198651-22198670 | MS.gene40148:intron | 30.0% | |
AGAATCAAACTAAGACATGA+AGG | - | chr4.3:22194998-22195017 | None:intergenic | 30.0% | |
AGAATGAAAATCTTGCTTTC+TGG | - | chr4.3:22196436-22196455 | None:intergenic | 30.0% | |
AGCACTTATAGTAGAAAAGA+TGG | + | chr4.3:22194348-22194367 | MS.gene40148:intron | 30.0% | |
AGTCAACTTAAAAGAAGACT+CGG | - | chr4.3:22195243-22195262 | None:intergenic | 30.0% | |
AGTGTGTTAGGTTTATCATA+AGG | - | chr4.3:22194061-22194080 | None:intergenic | 30.0% | |
ATATTATGGATGAAACCAAC+TGG | + | chr4.3:22198384-22198403 | MS.gene40148:CDS | 30.0% | |
ATCAATATATTTCGATCGTG+TGG | - | chr4.3:22195782-22195801 | None:intergenic | 30.0% | |
ATGATAAAACCAGCAATCAA+AGG | + | chr4.3:22198254-22198273 | MS.gene40148:CDS | 30.0% | |
ATGTTCAGTGAATGGTTAAT+AGG | - | chr4.3:22198592-22198611 | None:intergenic | 30.0% | |
CAAAACTGGCAAAAAATGTA+TGG | + | chr4.3:22196281-22196300 | MS.gene40148:intron | 30.0% | |
CAAGTGTAATTTACTGTAGA+CGG | + | chr4.3:22194284-22194303 | MS.gene40148:intron | 30.0% | |
CAATTCAGAATTCAATGTGA+AGG | - | chr4.3:22196473-22196492 | None:intergenic | 30.0% | |
CAATTTATAGCATTTGCCTT+TGG | - | chr4.3:22195140-22195159 | None:intergenic | 30.0% | |
CACACAAACTTTATCAATAC+TGG | - | chr4.3:22193804-22193823 | None:intergenic | 30.0% | |
CAGCCAAATTAAATGGTTTA+AGG | + | chr4.3:22199108-22199127 | MS.gene40148:intron | 30.0% | |
CATCTGAGGATATATTATCT+TGG | - | chr4.3:22195822-22195841 | None:intergenic | 30.0% | |
CCCTCATTATCATTTCTAAT+TGG | + | chr4.3:22198892-22198911 | MS.gene40148:intron | 30.0% | |
CTGAAAAGCTTATCAAAGAA+GGG | + | chr4.3:22199661-22199680 | MS.gene40148:CDS | 30.0% | |
GAAATAATCATTGTTCTCTG+TGG | - | chr4.3:22199482-22199501 | None:intergenic | 30.0% | |
GACGCAAAAAAGTTATGTTT+CGG | - | chr4.3:22193763-22193782 | None:intergenic | 30.0% | |
GAGAATGACATTCAAAATCT+TGG | - | chr4.3:22198621-22198640 | None:intergenic | 30.0% | |
GGATCTATAGATAAATGAGT+TGG | + | chr4.3:22194492-22194511 | MS.gene40148:intron | 30.0% | |
GTCATGAAAGAAGAGTTATT+TGG | - | chr4.3:22197222-22197241 | None:intergenic | 30.0% | |
GTTCAAGTAACTGAACAATT+TGG | + | chr4.3:22197183-22197202 | MS.gene40148:intron | 30.0% | |
GTTTCCGACAACAATTTAAA+TGG | + | chr4.3:22198507-22198526 | MS.gene40148:intron | 30.0% | |
TACAAAATACCCAAACATCA+GGG | + | chr4.3:22195178-22195197 | MS.gene40148:intron | 30.0% | |
TAGAGGCCAAAATTTCATTA+CGG | - | chr4.3:22196570-22196589 | None:intergenic | 30.0% | |
TATACTCATTGATGTCATCA+TGG | + | chr4.3:22196894-22196913 | MS.gene40148:intron | 30.0% | |
TCAAATATACGTGAAAAACG+TGG | - | chr4.3:22198643-22198662 | None:intergenic | 30.0% | |
TCCTACTTAACAAATGTTCT+TGG | + | chr4.3:22196156-22196175 | MS.gene40148:intron | 30.0% | |
TCTGAAAAGCTTATCAAAGA+AGG | + | chr4.3:22199660-22199679 | MS.gene40148:CDS | 30.0% | |
TGTTGTCTAAATGACCATAA+TGG | + | chr4.3:22196622-22196641 | MS.gene40148:intron | 30.0% | |
TTGTCACTCCATTATTCATT+TGG | + | chr4.3:22195740-22195759 | MS.gene40148:intron | 30.0% | |
TTTCTGAACTGAAAAGCAAA+AGG | - | chr4.3:22195027-22195046 | None:intergenic | 30.0% | |
! | AAACTAGACTTAGGTTGTTT+GGG | + | chr4.3:22194374-22194393 | MS.gene40148:intron | 30.0% |
! | AGGAAAATCCTTTGAAAGAT+AGG | - | chr4.3:22199551-22199570 | None:intergenic | 30.0% |
! | ATTGATGTCATCATGGATTA+TGG | + | chr4.3:22196901-22196920 | MS.gene40148:intron | 30.0% |
! | GACAACAATTTGAAACTGAA+TGG | - | chr4.3:22198807-22198826 | None:intergenic | 30.0% |
! | GACACATGCAAATTCTTTTT+GGG | - | chr4.3:22197633-22197652 | None:intergenic | 30.0% |
! | TCCAAGAACATTTGTTAAGT+AGG | - | chr4.3:22196160-22196179 | None:intergenic | 30.0% |
! | TGACACATGCAAATTCTTTT+TGG | - | chr4.3:22197634-22197653 | None:intergenic | 30.0% |
! | TGACAGTTGTACAATCTTTT+TGG | + | chr4.3:22196815-22196834 | MS.gene40148:intron | 30.0% |
! | TGGTTTTTGATAGAACACTA+TGG | + | chr4.3:22194524-22194543 | MS.gene40148:intron | 30.0% |
! | TGTAGAAGATCTGAAACTAT+GGG | - | chr4.3:22195612-22195631 | None:intergenic | 30.0% |
! | TTCCTCATAAATGCTTTGAA+AGG | + | chr4.3:22199200-22199219 | MS.gene40148:CDS | 30.0% |
! | TTCCTTTCAAAGCATTTATG+AGG | - | chr4.3:22199205-22199224 | None:intergenic | 30.0% |
! | TTGCCTTATAATTTTACTGG+TGG | + | chr4.3:22196356-22196375 | MS.gene40148:intron | 30.0% |
!! | AAGTTTGATTTTTACCCAAG+TGG | - | chr4.3:22198444-22198463 | None:intergenic | 30.0% |
!! | AGTTTGATTTTTACCCAAGT+GGG | - | chr4.3:22198443-22198462 | None:intergenic | 30.0% |
!! | CCAACAAAGCCATATTTTTA+TGG | - | chr4.3:22194158-22194177 | None:intergenic | 30.0% |
!! | CCATAAAAATATGGCTTTGT+TGG | + | chr4.3:22194155-22194174 | MS.gene40148:intron | 30.0% |
!! | TTATGGTGTAAGTTGGTAAA+TGG | + | chr4.3:22196918-22196937 | MS.gene40148:intron | 30.0% |
!!! | AAAGCTTGTTTTTAAGCATC+TGG | - | chr4.3:22195545-22195564 | None:intergenic | 30.0% |
!!! | CGCTATTGAAGTAGTTTTAT+AGG | + | chr4.3:22197865-22197884 | MS.gene40148:intron | 30.0% |
!!! | CTGTTACATTTTGGTGTTTA+AGG | - | chr4.3:22197155-22197174 | None:intergenic | 30.0% |
!!! | CTTCTTTTAAGTTGACTACA+CGG | + | chr4.3:22195246-22195265 | MS.gene40148:intron | 30.0% |
!!! | TTTTTTGCGTCTTTTACTAG+TGG | + | chr4.3:22193772-22193791 | MS.gene40148:intron | 30.0% |
AAATGCAGTGAGATTAAGAG+AGG | - | chr4.3:22195505-22195524 | None:intergenic | 35.0% | |
AACTACTTCAATAGCGAGAT+AGG | - | chr4.3:22197861-22197880 | None:intergenic | 35.0% | |
AATCAAAAAAGCCACACATC+TGG | + | chr4.3:22196231-22196250 | MS.gene40148:intron | 35.0% | |
ACTACAAGCTTGTGAAGTAA+AGG | - | chr4.3:22195378-22195397 | None:intergenic | 35.0% | |
AGATGGTAGAAACTAGACTT+AGG | + | chr4.3:22194365-22194384 | MS.gene40148:intron | 35.0% | |
ATATATAGGAATAGAGGGGA+TGG | + | chr4.3:22196847-22196866 | MS.gene40148:intron | 35.0% | |
ATCAAGCAGTTGCTTGAAAA+GGG | + | chr4.3:22197388-22197407 | MS.gene40148:intron | 35.0% | |
ATCCTGAATACTTCTCAAGT+TGG | - | chr4.3:22195970-22195989 | None:intergenic | 35.0% | |
ATCTTAAACCTCATTGACCA+CGG | - | chr4.3:22198716-22198735 | None:intergenic | 35.0% | |
ATGAAATGGTTGCAAATGTG+GGG | - | chr4.3:22195424-22195443 | None:intergenic | 35.0% | |
ATGACATTAGGTAGAGAGTT+GGG | + | chr4.3:22194323-22194342 | MS.gene40148:intron | 35.0% | |
ATGGTCATTTAGACAACACA+TGG | - | chr4.3:22196620-22196639 | None:intergenic | 35.0% | |
CAAAATGACTTTCCTCATTC+AGG | - | chr4.3:22196320-22196339 | None:intergenic | 35.0% | |
CAACCATTTCATCACTTGTT+GGG | + | chr4.3:22195432-22195451 | MS.gene40148:intron | 35.0% | |
CCTCAAAACAAGTTAGTAAG+TGG | - | chr4.3:22195689-22195708 | None:intergenic | 35.0% | |
CTACAAAATACCCAAACATC+AGG | + | chr4.3:22195177-22195196 | MS.gene40148:intron | 35.0% | |
CTCTATCACATACACTTAAG+AGG | + | chr4.3:22196761-22196780 | MS.gene40148:intron | 35.0% | |
CTGCTACAAATATATGAGCT+CGG | - | chr4.3:22199277-22199296 | None:intergenic | 35.0% | |
GAACAGGATAGCAGAATAAA+TGG | - | chr4.3:22195715-22195734 | None:intergenic | 35.0% | |
GAGAGGATGATGTTTATATG+TGG | - | chr4.3:22195089-22195108 | None:intergenic | 35.0% | |
GATATGAAGCTTCACAAAAC+TGG | + | chr4.3:22196267-22196286 | MS.gene40148:intron | 35.0% | |
GATGAAATGGTTGCAAATGT+GGG | - | chr4.3:22195425-22195444 | None:intergenic | 35.0% | |
GGCAAATGCTATAAATTGCA+TGG | + | chr4.3:22195142-22195161 | MS.gene40148:intron | 35.0% | |
GGTTAATGATGTTCAGTGAA+TGG | - | chr4.3:22198600-22198619 | None:intergenic | 35.0% | |
GTATTGGACAAAATTCACTG+AGG | - | chr4.3:22194776-22194795 | None:intergenic | 35.0% | |
GTGATACCTACTCTAACAAT+TGG | + | chr4.3:22199018-22199037 | MS.gene40148:CDS | 35.0% | |
TAAATCATAACACGTCTCTG+CGG | - | chr4.3:22194633-22194652 | None:intergenic | 35.0% | |
TAAGTAGGAGAACACTAGAA+TGG | - | chr4.3:22196145-22196164 | None:intergenic | 35.0% | |
TATCCCAACAAGTGATGAAA+TGG | - | chr4.3:22195438-22195457 | None:intergenic | 35.0% | |
TCCTGAATACTTCTCAAGTT+GGG | - | chr4.3:22195969-22195988 | None:intergenic | 35.0% | |
TCTTCAAATACTCCAGAGTT+TGG | - | chr4.3:22199722-22199741 | None:intergenic | 35.0% | |
TGACTATAAACGAACTCGAA+GGG | + | chr4.3:22198354-22198373 | MS.gene40148:CDS | 35.0% | |
TGATAAACCTAACACACTCT+TGG | + | chr4.3:22194063-22194082 | MS.gene40148:intron | 35.0% | |
TGATGAAATGGTTGCAAATG+TGG | - | chr4.3:22195426-22195445 | None:intergenic | 35.0% | |
TGTACGAGAAACTATTAGGA+AGG | + | chr4.3:22194471-22194490 | MS.gene40148:intron | 35.0% | |
TGTGCTTAAGAGATTGTGTT+TGG | - | chr4.3:22197741-22197760 | None:intergenic | 35.0% | |
TTAGATTTGGCATCAAGACT+TGG | - | chr4.3:22195063-22195082 | None:intergenic | 35.0% | |
TTCAATACACCTTTGATTGC+TGG | - | chr4.3:22198266-22198285 | None:intergenic | 35.0% | |
TTCTACAGAGACTGAATATC+AGG | + | chr4.3:22195625-22195644 | MS.gene40148:intron | 35.0% | |
TTGTTGGCCCCATAAAAATA+TGG | + | chr4.3:22194146-22194165 | MS.gene40148:intron | 35.0% | |
! | AAAGTTATGTTTCGGGTGAA+TGG | - | chr4.3:22193755-22193774 | None:intergenic | 35.0% |
! | AAATGAGTTGGAGAAAGACA+TGG | + | chr4.3:22194504-22194523 | MS.gene40148:intron | 35.0% |
! | ACTTGTTGATATTGAGTCAC+TGG | + | chr4.3:22197105-22197124 | MS.gene40148:intron | 35.0% |
! | AGGTGTTTCTGTAGCAAAAT+AGG | + | chr4.3:22194798-22194817 | MS.gene40148:intron | 35.0% |
! | ATCAGCATTAGTTTCTCCTA+AGG | + | chr4.3:22199573-22199592 | MS.gene40148:intron | 35.0% |
! | ATGGGCTTTTCTTTATCTGT+AGG | - | chr4.3:22195594-22195613 | None:intergenic | 35.0% |
! | ATGTTTGGGTATTTTGTAGC+TGG | - | chr4.3:22195176-22195195 | None:intergenic | 35.0% |
! | CGATAATTTGCGTTTCATTG+TGG | - | chr4.3:22193688-22193707 | None:intergenic | 35.0% |
! | CTGTAGAAGATCTGAAACTA+TGG | - | chr4.3:22195613-22195632 | None:intergenic | 35.0% |
! | GAAACTAGACTTAGGTTGTT+TGG | + | chr4.3:22194373-22194392 | MS.gene40148:intron | 35.0% |
! | GTGAATTTTGTCCAATACAC+AGG | + | chr4.3:22194778-22194797 | MS.gene40148:intron | 35.0% |
! | GTGTTGCTGGTGAATTAATT+TGG | + | chr4.3:22195658-22195677 | MS.gene40148:intron | 35.0% |
! | GTTTCTCGTACAGTTTTTCT+AGG | - | chr4.3:22194463-22194482 | None:intergenic | 35.0% |
! | TAAATTAGCCATTGATGGGT+AGG | - | chr4.3:22193974-22193993 | None:intergenic | 35.0% |
! | TAGAAATGATAATGAGGGCA+GGG | - | chr4.3:22198890-22198909 | None:intergenic | 35.0% |
! | TCATGGATTATGGTGTAAGT+TGG | + | chr4.3:22196911-22196930 | MS.gene40148:intron | 35.0% |
! | TGAAACTTTTGACCAAACTC+TGG | + | chr4.3:22199707-22199726 | MS.gene40148:CDS | 35.0% |
! | TGTTTGGGTATTTTGTAGCT+GGG | - | chr4.3:22195175-22195194 | None:intergenic | 35.0% |
! | TTAGAAATGATAATGAGGGC+AGG | - | chr4.3:22198891-22198910 | None:intergenic | 35.0% |
!! | GCTTTGTTTATAGGAGGAAA+GGG | - | chr4.3:22194931-22194950 | None:intergenic | 35.0% |
!! | GTCTCAAAACAAGAAGTACT+AGG | + | chr4.3:22197835-22197854 | MS.gene40148:intron | 35.0% |
!!! | CATTGATTTTGACAGTTCAG+TGG | + | chr4.3:22195217-22195236 | MS.gene40148:intron | 35.0% |
!!! | CCACTTACTAACTTGTTTTG+AGG | + | chr4.3:22195686-22195705 | MS.gene40148:intron | 35.0% |
!!! | TCTTAAGCACATGTTTTGAC+CGG | + | chr4.3:22197750-22197769 | MS.gene40148:intron | 35.0% |
AAACTCAACATCAGACCAGT+TGG | - | chr4.3:22198402-22198421 | None:intergenic | 40.0% | |
AAGGAAAAACAGTGCGAAGT+TGG | + | chr4.3:22194970-22194989 | MS.gene40148:intron | 40.0% | |
AATACTACTGTTAGAGACCC+AGG | + | chr4.3:22197421-22197440 | MS.gene40148:intron | 40.0% | |
AATATCCTCGACATGAGTGA+TGG | - | chr4.3:22199252-22199271 | None:intergenic | 40.0% | |
ACAAGTTCACATCCTGCTAT+AGG | - | chr4.3:22198052-22198071 | None:intergenic | 40.0% | |
ACTGCCGCATTTGATAAACT+GGG | - | chr4.3:22193842-22193861 | None:intergenic | 40.0% | |
AGATGTTAAGAGAGAGACCT+GGG | - | chr4.3:22197441-22197460 | None:intergenic | 40.0% | |
AGTCAGATCACTAGAGTTAG+GGG | + | chr4.3:22194433-22194452 | MS.gene40148:intron | 40.0% | |
ATCAAATGCGGCAGTATTAC+AGG | + | chr4.3:22193847-22193866 | MS.gene40148:CDS | 40.0% | |
ATCATGGTGACACCGTAATT+TGG | - | chr4.3:22197800-22197819 | None:intergenic | 40.0% | |
ATCCCATCTAGTGTTTCCAT+GGG | + | chr4.3:22199060-22199079 | MS.gene40148:CDS | 40.0% | |
ATCGATTGACCCTGATGTTT+GGG | - | chr4.3:22195190-22195209 | None:intergenic | 40.0% | |
ATCTTCAGTTGTCATCTGCT+TGG | + | chr4.3:22194207-22194226 | MS.gene40148:intron | 40.0% | |
ATTCCCATGGAAACACTAGA+TGG | - | chr4.3:22199066-22199085 | None:intergenic | 40.0% | |
ATTGTAAGGTACAGGCAGTA+TGG | - | chr4.3:22195326-22195345 | None:intergenic | 40.0% | |
ATTTCGATCGTGTGGAACAT+TGG | - | chr4.3:22195774-22195793 | None:intergenic | 40.0% | |
CATTTAGACAAGCCTGAATG+AGG | + | chr4.3:22196305-22196324 | MS.gene40148:intron | 40.0% | |
CTACAGAAACACCTGTGTAT+TGG | - | chr4.3:22194792-22194811 | None:intergenic | 40.0% | |
CTCATAGCACTGCAAAGTTT+GGG | + | chr4.3:22197974-22197993 | MS.gene40148:CDS | 40.0% | |
CTTCTCCGTGAGTATTCAAA+AGG | + | chr4.3:22194951-22194970 | MS.gene40148:intron | 40.0% | |
GAAGGACCAATTGTTAGAGT+AGG | - | chr4.3:22199027-22199046 | None:intergenic | 40.0% | |
GAGAAGACTAGTAGATCAGA+TGG | + | chr4.3:22194405-22194424 | MS.gene40148:intron | 40.0% | |
GAGACTGAATATCAGGCTAT+TGG | + | chr4.3:22195632-22195651 | MS.gene40148:intron | 40.0% | |
GAGTCAGATCACTAGAGTTA+GGG | + | chr4.3:22194432-22194451 | MS.gene40148:intron | 40.0% | |
GAGTCTTTGTGTATTGTCCT+TGG | - | chr4.3:22199138-22199157 | None:intergenic | 40.0% | |
GATCAAGCAGTTGCTTGAAA+AGG | + | chr4.3:22197387-22197406 | MS.gene40148:intron | 40.0% | |
GATGACATTAGGTAGAGAGT+TGG | + | chr4.3:22194322-22194341 | MS.gene40148:intron | 40.0% | |
GATTATCAACTTTGCCTTGC+TGG | - | chr4.3:22199637-22199656 | None:intergenic | 40.0% | |
GCAACCATTTCATCACTTGT+TGG | + | chr4.3:22195431-22195450 | MS.gene40148:intron | 40.0% | |
GCAGAAAAAGAATCAGCTTC+TGG | + | chr4.3:22199293-22199312 | MS.gene40148:CDS | 40.0% | |
GGAGAAACTAATGCTGATGA+AGG | - | chr4.3:22199571-22199590 | None:intergenic | 40.0% | |
GGATACTTAAACACATTGCC+AGG | + | chr4.3:22195453-22195472 | MS.gene40148:intron | 40.0% | |
GGGATATCTTGTGTTAGAGA+AGG | - | chr4.3:22199045-22199064 | None:intergenic | 40.0% | |
GTGAATAAAATACCTCAGCC+TGG | - | chr4.3:22195474-22195493 | None:intergenic | 40.0% | |
GTGACTATAAACGAACTCGA+AGG | + | chr4.3:22198353-22198372 | MS.gene40148:CDS | 40.0% | |
GTTCGAAAATTCCAGATGTG+TGG | - | chr4.3:22196245-22196264 | None:intergenic | 40.0% | |
GTTTAGCAATCAACCTACCT+CGG | - | chr4.3:22198116-22198135 | None:intergenic | 40.0% | |
TAATGCTTGAGACTGAAGCA+CGG | - | chr4.3:22195291-22195310 | None:intergenic | 40.0% | |
TACTGCCGCATTTGATAAAC+TGG | - | chr4.3:22193843-22193862 | None:intergenic | 40.0% | |
TATAGCATTTGCCTTTGGTG+TGG | - | chr4.3:22195135-22195154 | None:intergenic | 40.0% | |
TATCCCATCTAGTGTTTCCA+TGG | + | chr4.3:22199059-22199078 | MS.gene40148:CDS | 40.0% | |
TCCTATTTCCTACCCATCAA+TGG | + | chr4.3:22193963-22193982 | MS.gene40148:intron | 40.0% | |
TGACATTAGGTAGAGAGTTG+GGG | + | chr4.3:22194324-22194343 | MS.gene40148:intron | 40.0% | |
TGACTTCAAGCTTACTCAGT+TGG | - | chr4.3:22199401-22199420 | None:intergenic | 40.0% | |
TGCAAATGTGGGGTACAAAT+TGG | - | chr4.3:22195414-22195433 | None:intergenic | 40.0% | |
TGGAGTGACAATCTAAGAAC+AGG | - | chr4.3:22195731-22195750 | None:intergenic | 40.0% | |
TGTTAGAAGTGACATTCCCA+TGG | - | chr4.3:22199079-22199098 | None:intergenic | 40.0% | |
TTCCCATGGAAACACTAGAT+GGG | - | chr4.3:22199065-22199084 | None:intergenic | 40.0% | |
TTCTCAGCTTAGACAGTAAG+AGG | - | chr4.3:22195930-22195949 | None:intergenic | 40.0% | |
TTGAGCGAATACAACTCTCT+TGG | + | chr4.3:22196108-22196127 | MS.gene40148:intron | 40.0% | |
TTGTAAGGTACAGGCAGTAT+GGG | - | chr4.3:22195325-22195344 | None:intergenic | 40.0% | |
TTTAGCAATCAACCTACCTC+GGG | - | chr4.3:22198115-22198134 | None:intergenic | 40.0% | |
TTTGAACTTTGCAGCTTCAG+AGG | - | chr4.3:22199453-22199472 | None:intergenic | 40.0% | |
! | AAGAAGAAGGCATGTGTGAT+AGG | + | chr4.3:22197337-22197356 | MS.gene40148:intron | 40.0% |
! | AAGTCTTATCCCACTAAGTG+GGG | - | chr4.3:22194573-22194592 | None:intergenic | 40.0% |
! | ATGCCAAAAGGTGTATAGAG+AGG | - | chr4.3:22195106-22195125 | None:intergenic | 40.0% |
! | ATGGGAATGTCACTTCTAAC+AGG | + | chr4.3:22199078-22199097 | MS.gene40148:CDS | 40.0% |
! | ATTTGATGATTGCTCCAGCA+AGG | + | chr4.3:22199620-22199639 | MS.gene40148:CDS | 40.0% |
! | CAAGTCTTATCCCACTAAGT+GGG | - | chr4.3:22194574-22194593 | None:intergenic | 40.0% |
! | CATCCTCTCTATACACCTTT+TGG | + | chr4.3:22195100-22195119 | MS.gene40148:intron | 40.0% |
! | CTGGAGTATTTGAAGACTCA+GGG | + | chr4.3:22199726-22199745 | MS.gene40148:CDS | 40.0% |
! | CTTTTGAATACTCACGGAGA+AGG | - | chr4.3:22194953-22194972 | None:intergenic | 40.0% |
! | TATCGATTGACCCTGATGTT+TGG | - | chr4.3:22195191-22195210 | None:intergenic | 40.0% |
! | TCTGGAGTATTTGAAGACTC+AGG | + | chr4.3:22199725-22199744 | MS.gene40148:CDS | 40.0% |
! | TGGAGTATTTGAAGACTCAG+GGG | + | chr4.3:22199727-22199746 | MS.gene40148:CDS | 40.0% |
! | TTGATAACTGTCGCGGTAAA+TGG | + | chr4.3:22193880-22193899 | MS.gene40148:CDS | 40.0% |
! | TTGATTTTTACCCAAGTGGG+TGG | - | chr4.3:22198440-22198459 | None:intergenic | 40.0% |
!! | ACGGAGAAGGCTTTGTTTAT+AGG | - | chr4.3:22194940-22194959 | None:intergenic | 40.0% |
!! | CTCAAAAGTGCTAGCTGAAA+AGG | + | chr4.3:22198951-22198970 | MS.gene40148:CDS | 40.0% |
!! | GAGAAGGCTTTGTTTATAGG+AGG | - | chr4.3:22194937-22194956 | None:intergenic | 40.0% |
!! | GATTTTGATGCTCCTATAGC+AGG | + | chr4.3:22198037-22198056 | MS.gene40148:CDS | 40.0% |
!! | GGACATGGAAATAGCTTTGT+TGG | + | chr4.3:22194130-22194149 | MS.gene40148:intron | 40.0% |
!! | GGCTTTGTTTATAGGAGGAA+AGG | - | chr4.3:22194932-22194951 | None:intergenic | 40.0% |
!! | GGGTACAAATTGGCTTTAGA+TGG | - | chr4.3:22195404-22195423 | None:intergenic | 40.0% |
!! | GTTTTTAAGCATCTGGTGTC+TGG | - | chr4.3:22195538-22195557 | None:intergenic | 40.0% |
!! | TCCCAACTTGAGAAGTATTC+AGG | + | chr4.3:22195965-22195984 | MS.gene40148:intron | 40.0% |
!! | TGAGGTGATATACTGACTTG+AGG | - | chr4.3:22194733-22194752 | None:intergenic | 40.0% |
AAACTGAGGAGTCTCTCTCA+AGG | + | chr4.3:22194704-22194723 | MS.gene40148:intron | 45.0% | |
AAAGGAATGCAGATCCTGTC+AGG | + | chr4.3:22199218-22199237 | MS.gene40148:CDS | 45.0% | |
AAGAGCAGAAACTGACTAGC+TGG | - | chr4.3:22195905-22195924 | None:intergenic | 45.0% | |
AGAATCACTCAGAGTGACAG+AGG | + | chr4.3:22195862-22195881 | MS.gene40148:CDS | 45.0% | |
AGTTCACAGGTGTAGCAAGT+TGG | - | chr4.3:22198078-22198097 | None:intergenic | 45.0% | |
ATAAACGAACTCGAAGGGAC+TGG | + | chr4.3:22198359-22198378 | MS.gene40148:CDS | 45.0% | |
ATTACAGTGGCACACTTCTC+CGG | - | chr4.3:22197772-22197791 | None:intergenic | 45.0% | |
ATTTGAACACCTGAAAGCCG+TGG | + | chr4.3:22198696-22198715 | MS.gene40148:intron | 45.0% | |
CAAACCCAAATCTCAAGTCG+AGG | + | chr4.3:22193935-22193954 | MS.gene40148:CDS | 45.0% | |
CAGCCCCAGTTTATCAAATG+CGG | + | chr4.3:22193835-22193854 | MS.gene40148:intron | 45.0% | |
CAGTATATCACCTCACTTCG+TGG | + | chr4.3:22194738-22194757 | MS.gene40148:intron | 45.0% | |
CCAAACTTTGCAGTGCTATG+AGG | - | chr4.3:22197976-22197995 | None:intergenic | 45.0% | |
CCACTTAGTGGGATAAGACT+TGG | + | chr4.3:22194572-22194591 | MS.gene40148:intron | 45.0% | |
CCTCATAGCACTGCAAAGTT+TGG | + | chr4.3:22197973-22197992 | MS.gene40148:CDS | 45.0% | |
CTGAGAAACTTAGCAAGCTC+AGG | - | chr4.3:22199353-22199372 | None:intergenic | 45.0% | |
CTGCCGCATTTGATAAACTG+GGG | - | chr4.3:22193841-22193860 | None:intergenic | 45.0% | |
GAAGGGTTCAGTTTCAAGCA+TGG | + | chr4.3:22199678-22199697 | MS.gene40148:CDS | 45.0% | |
GACCTATAGCTCACAAAGTC+AGG | + | chr4.3:22194109-22194128 | MS.gene40148:intron | 45.0% | |
GACTAGTAGATCAGATGGAG+AGG | + | chr4.3:22194410-22194429 | MS.gene40148:intron | 45.0% | |
GAGATGTTAAGAGAGAGACC+TGG | - | chr4.3:22197442-22197461 | None:intergenic | 45.0% | |
GATATCCATCACTCATGTCG+AGG | + | chr4.3:22199244-22199263 | MS.gene40148:CDS | 45.0% | |
GCTATATGTAACCCATGTGC+AGG | + | chr4.3:22196187-22196206 | MS.gene40148:intron | 45.0% | |
GGAGTCAGATCACTAGAGTT+AGG | + | chr4.3:22194431-22194450 | MS.gene40148:intron | 45.0% | |
GTACATGATGTGCATCCTCA+TGG | + | chr4.3:22194848-22194867 | MS.gene40148:intron | 45.0% | |
GTCCTGACTTTGTGAGCTAT+AGG | - | chr4.3:22194114-22194133 | None:intergenic | 45.0% | |
GTGTGGCTAAAGATGCCAAA+AGG | - | chr4.3:22195118-22195137 | None:intergenic | 45.0% | |
TAGCTCACAAAGTCAGGACA+TGG | + | chr4.3:22194115-22194134 | MS.gene40148:intron | 45.0% | |
TCGAACACTTTGATGCACTC+TGG | + | chr4.3:22193712-22193731 | MS.gene40148:CDS | 45.0% | |
TCTTGAGAGGCAAAGTTCAC+AGG | - | chr4.3:22198091-22198110 | None:intergenic | 45.0% | |
TGATGTTGGGACTTCATCTG+AGG | - | chr4.3:22195836-22195855 | None:intergenic | 45.0% | |
TGATTCTGCCAGCTGATGTT+GGG | - | chr4.3:22195849-22195868 | None:intergenic | 45.0% | |
TTAAACACATTGCCAGGCTG+AGG | + | chr4.3:22195459-22195478 | MS.gene40148:intron | 45.0% | |
TTGATTTCTCACGAGCTTCG+AGG | - | chr4.3:22196217-22196236 | None:intergenic | 45.0% | |
TTTGGCATCAAGACTTGGCT+TGG | - | chr4.3:22195058-22195077 | None:intergenic | 45.0% | |
! | AAGAAGGCATGTGTGATAGG+TGG | + | chr4.3:22197340-22197359 | MS.gene40148:intron | 45.0% |
! | ACCAACCTCGACTTGAGATT+TGG | - | chr4.3:22193943-22193962 | None:intergenic | 45.0% |
! | AGGCTATTGGTTAGTGTTGC+TGG | + | chr4.3:22195645-22195664 | MS.gene40148:intron | 45.0% |
! | CCAACCTCGACTTGAGATTT+GGG | - | chr4.3:22193942-22193961 | None:intergenic | 45.0% |
! | CCAAGTCTTATCCCACTAAG+TGG | - | chr4.3:22194575-22194594 | None:intergenic | 45.0% |
! | CTCGACTTGAGATTTGGGTT+TGG | - | chr4.3:22193937-22193956 | None:intergenic | 45.0% |
! | GCCATTGATGGGTAGGAAAT+AGG | - | chr4.3:22193967-22193986 | None:intergenic | 45.0% |
! | GCTTTCTGGTGCCTTCAATT+TGG | - | chr4.3:22196422-22196441 | None:intergenic | 45.0% |
! | GGAGTATTTGAAGACTCAGG+GGG | + | chr4.3:22199728-22199747 | MS.gene40148:CDS | 45.0% |
! | GGTTCTCTTGATAACTGTCG+CGG | + | chr4.3:22193873-22193892 | MS.gene40148:CDS | 45.0% |
! | TGAGAAGCCAAGAGTGTGTT+AGG | - | chr4.3:22194073-22194092 | None:intergenic | 45.0% |
! | TGATGGATATCGAACCTGAC+AGG | - | chr4.3:22199235-22199254 | None:intergenic | 45.0% |
! | TTGGGTATTTTGTAGCTGGG+AGG | - | chr4.3:22195172-22195191 | None:intergenic | 45.0% |
!! | CGAAGGGACTGGTCATATTA+TGG | + | chr4.3:22198370-22198389 | MS.gene40148:CDS | 45.0% |
!!! | TCAGCTAGCACTTTTGAGAC+AGG | - | chr4.3:22198949-22198968 | None:intergenic | 45.0% |
ATGCGGCAGTATTACAGGCT+TGG | + | chr4.3:22193852-22193871 | MS.gene40148:CDS | 50.0% | |
ATGGCGTCGTTTGAGTCATG+TGG | + | chr4.3:22194543-22194562 | MS.gene40148:intron | 50.0% | |
CCCAAATCTCAAGTCGAGGT+TGG | + | chr4.3:22193939-22193958 | MS.gene40148:intron | 50.0% | |
GATGAAGTCCCAACATCAGC+TGG | + | chr4.3:22195838-22195857 | MS.gene40148:intron | 50.0% | |
GGAGGAAAGGGACTGTTGAT+AGG | - | chr4.3:22194919-22194938 | None:intergenic | 50.0% | |
GGCATCTTTAGCCACACCAA+AGG | + | chr4.3:22195121-22195140 | MS.gene40148:intron | 50.0% | |
GTCGCGGTAAATGGAAAGCA+TGG | + | chr4.3:22193889-22193908 | MS.gene40148:CDS | 50.0% | |
GTGATTCTGCCAGCTGATGT+TGG | - | chr4.3:22195850-22195869 | None:intergenic | 50.0% | |
TGCTAGCTGAAAAGGCTGCA+TGG | + | chr4.3:22198959-22198978 | MS.gene40148:CDS | 50.0% | |
TTCGAGGACTTCCTGCACAT+GGG | - | chr4.3:22196201-22196220 | None:intergenic | 50.0% | |
! | ACTGACTAGCTGGAAGGAAG+AGG | - | chr4.3:22195895-22195914 | None:intergenic | 50.0% |
! | GCAGAAACTGACTAGCTGGA+AGG | - | chr4.3:22195901-22195920 | None:intergenic | 50.0% |
!!! | GATAGGTGGCACTGGTTTTG+TGG | + | chr4.3:22197354-22197373 | MS.gene40148:intron | 50.0% |
ACACTGCAAAGCCACCCACT+TGG | + | chr4.3:22198426-22198445 | MS.gene40148:CDS | 55.0% | |
ACCTACCTCGGGATCTTGAG+AGG | - | chr4.3:22198104-22198123 | None:intergenic | 55.0% | |
ATGTGGCTGACCCCACTTAG+TGG | + | chr4.3:22194560-22194579 | MS.gene40148:intron | 55.0% | |
CACCTCACTTCGTGGTCGTT+GGG | + | chr4.3:22194746-22194765 | MS.gene40148:intron | 55.0% | |
CACTGCAAAGCCACCCACTT+GGG | + | chr4.3:22198427-22198446 | MS.gene40148:CDS | 55.0% | |
CCTCATTGACCACGGCTTTC+AGG | - | chr4.3:22198708-22198727 | None:intergenic | 55.0% | |
CCTGAAAGCCGTGGTCAATG+AGG | + | chr4.3:22198705-22198724 | MS.gene40148:intron | 55.0% | |
CTTCGAGGACTTCCTGCACA+TGG | - | chr4.3:22196202-22196221 | None:intergenic | 55.0% | |
CTTTGCCTCTCAAGATCCCG+AGG | + | chr4.3:22198096-22198115 | MS.gene40148:CDS | 55.0% | |
GCATGTGTGATAGGTGGCAC+TGG | + | chr4.3:22197346-22197365 | MS.gene40148:intron | 55.0% | |
TCACCTCACTTCGTGGTCGT+TGG | + | chr4.3:22194745-22194764 | MS.gene40148:intron | 55.0% | |
TGTGGCTGACCCCACTTAGT+GGG | + | chr4.3:22194561-22194580 | MS.gene40148:intron | 55.0% | |
TTCCCAACGACCACGAAGTG+AGG | - | chr4.3:22194751-22194770 | None:intergenic | 55.0% | |
GCCTCTCAAGATCCCGAGGT+AGG | + | chr4.3:22198100-22198119 | MS.gene40148:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 22193657 | 22199764 | 22193657 | ID=MS.gene40148 |
chr4.3 | mRNA | 22193657 | 22199764 | 22193657 | ID=MS.gene40148.t1;Parent=MS.gene40148 |
chr4.3 | exon | 22193657 | 22193744 | 22193657 | ID=MS.gene40148.t1.exon1;Parent=MS.gene40148.t1 |
chr4.3 | CDS | 22193657 | 22193744 | 22193657 | ID=cds.MS.gene40148.t1;Parent=MS.gene40148.t1 |
chr4.3 | exon | 22193838 | 22193956 | 22193838 | ID=MS.gene40148.t1.exon2;Parent=MS.gene40148.t1 |
chr4.3 | CDS | 22193838 | 22193956 | 22193838 | ID=cds.MS.gene40148.t1;Parent=MS.gene40148.t1 |
chr4.3 | exon | 22195839 | 22195908 | 22195839 | ID=MS.gene40148.t1.exon3;Parent=MS.gene40148.t1 |
chr4.3 | CDS | 22195839 | 22195908 | 22195839 | ID=cds.MS.gene40148.t1;Parent=MS.gene40148.t1 |
chr4.3 | exon | 22197951 | 22198117 | 22197951 | ID=MS.gene40148.t1.exon4;Parent=MS.gene40148.t1 |
chr4.3 | CDS | 22197951 | 22198117 | 22197951 | ID=cds.MS.gene40148.t1;Parent=MS.gene40148.t1 |
chr4.3 | exon | 22198248 | 22198448 | 22198248 | ID=MS.gene40148.t1.exon5;Parent=MS.gene40148.t1 |
chr4.3 | CDS | 22198248 | 22198448 | 22198248 | ID=cds.MS.gene40148.t1;Parent=MS.gene40148.t1 |
chr4.3 | exon | 22198940 | 22199099 | 22198940 | ID=MS.gene40148.t1.exon6;Parent=MS.gene40148.t1 |
chr4.3 | CDS | 22198940 | 22199099 | 22198940 | ID=cds.MS.gene40148.t1;Parent=MS.gene40148.t1 |
chr4.3 | exon | 22199192 | 22199405 | 22199192 | ID=MS.gene40148.t1.exon7;Parent=MS.gene40148.t1 |
chr4.3 | CDS | 22199192 | 22199405 | 22199192 | ID=cds.MS.gene40148.t1;Parent=MS.gene40148.t1 |
chr4.3 | exon | 22199620 | 22199764 | 22199620 | ID=MS.gene40148.t1.exon8;Parent=MS.gene40148.t1 |
chr4.3 | CDS | 22199620 | 22199764 | 22199620 | ID=cds.MS.gene40148.t1;Parent=MS.gene40148.t1 |
Gene Sequence |
Protein sequence |