AlfalfaGEDB | MS.gene56554

M. sativa cultivar XinJiangDaYe / MS.gene56554

KEGG: -
GO: GO:0003674 GO:0003824 GO:0005488 GO:0048037 GO:0050662
PFAM: PF01370.24

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene56554.t1	XP_013456728.1	97.9	340	7	0	1	340	1	340	1.20E-186	662.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene56554.t1	Q5XLY0	46.2	327	157	5	21	340	12	326	2.2e-72	274.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene56554.t1	A0A072ULV1	97.9	340	7	0	1	340	1	340	8.5e-187	662.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene04932	MS.gene56554	0.81854	1.86E-52	-1.69E-46
MS.gene049549	MS.gene56554	0.802979	4.34E-49	-1.69E-46
MS.gene049813	MS.gene56554	0.816756	4.69E-52	-1.69E-46
MS.gene051440	MS.gene56554	0.809515	1.82E-50	-1.69E-46
MS.gene051973	MS.gene56554	0.800623	1.32E-48	-1.69E-46
MS.gene052211	MS.gene56554	0.841901	3.59E-58	-1.69E-46
MS.gene05240	MS.gene56554	0.846998	1.53E-59	-1.69E-46
MS.gene052606	MS.gene56554	0.80519	1.50E-49	-1.69E-46
MS.gene053097	MS.gene56554	0.812694	3.73E-51	-1.69E-46
MS.gene053887	MS.gene56554	0.800497	1.40E-48	-1.69E-46
MS.gene054146	MS.gene56554	0.825615	4.26E-54	-1.69E-46
MS.gene054277	MS.gene56554	0.82315	1.62E-53	-1.69E-46
MS.gene054742	MS.gene56554	0.825343	4.94E-54	-1.69E-46
MS.gene05589	MS.gene56554	-0.801492	8.78E-49	-1.69E-46
MS.gene056920	MS.gene56554	0.824871	6.38E-54	-1.69E-46
MS.gene057261	MS.gene56554	0.805626	1.22E-49	-1.69E-46
MS.gene058381	MS.gene56554	0.822343	2.49E-53	-1.69E-46
MS.gene058603	MS.gene56554	0.831423	1.68E-55	-1.69E-46
MS.gene059953	MS.gene56554	0.806894	6.59E-50	-1.69E-46
MS.gene060087	MS.gene56554	0.839817	1.26E-57	-1.69E-46
MS.gene060358	MS.gene56554	0.819929	8.97E-53	-1.69E-46
MS.gene060593	MS.gene56554	0.805748	1.15E-49	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene92809	MS.gene56554	PPI
MS.gene56554	MS.gene92808	PPI
MS.gene56554	MS.gene016248	PPI
MS.gene56554	MS.gene27778	PPI
MS.gene27551	MS.gene56554	PPI
MS.gene016249	MS.gene56554	PPI
MS.gene56554	MS.gene071398	PPI
MS.gene028567	MS.gene56554	PPI
MS.gene92810	MS.gene56554	PPI
MS.gene27776	MS.gene56554	PPI
MS.gene071401	MS.gene56554	PPI
MS.gene56554	MS.gene27554	PPI
MS.gene56554	MS.gene27552	PPI
MS.gene56554	MS.gene27550	PPI
MS.gene56554	MS.gene27775	PPI
MS.gene56554	MS.gene27779	PPI
MS.gene92811	MS.gene56554	PPI
MS.gene56554	MS.gene016245	PPI
MS.gene40148	MS.gene56554	PPI
MS.gene016246	MS.gene56554	PPI
MS.gene27553	MS.gene56554	PPI
MS.gene92812	MS.gene56554	PPI
MS.gene40154	MS.gene56554	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene56554.t1	MTR_4g081440	97.941	340	7	0	1	340	1	340	0.0	691
MS.gene56554.t1	MTR_4g081440	97.619	336	7	1	5	340	1	335	0.0	677
MS.gene56554.t1	MTR_1g022445	43.119	327	151	8	25	340	9	311	1.60e-86	266
MS.gene56554.t1	MTR_1g022440	41.896	327	155	8	25	340	9	311	1.41e-81	253
MS.gene56554.t1	MTR_4g092080	38.580	324	179	6	23	339	13	323	7.59e-71	226
MS.gene56554.t1	MTR_7g074880	38.037	326	176	8	22	340	6	312	1.85e-68	219
MS.gene56554.t1	MTR_7g074730	37.117	326	181	7	22	340	6	314	7.38e-67	215
MS.gene56554.t1	MTR_7g074850	37.423	326	181	8	22	340	6	315	5.46e-66	213
MS.gene56554.t1	MTR_7g074820	37.730	326	180	9	22	340	6	315	2.18e-63	206
MS.gene56554.t1	MTR_8g062440	38.462	338	167	7	25	346	9	321	1.22e-62	204
MS.gene56554.t1	MTR_8g062440	38.348	339	167	7	25	346	9	322	1.87e-62	203
MS.gene56554.t1	MTR_7g074710	34.356	326	188	7	22	340	6	312	1.54e-61	201
MS.gene56554.t1	MTR_8g062110	39.169	337	165	9	11	338	1	306	4.21e-61	200
MS.gene56554.t1	MTR_8g062110	38.576	337	168	8	6	333	5	311	4.56e-61	200
MS.gene56554.t1	MTR_8g062440	42.456	285	131	5	25	301	9	268	9.71e-61	199
MS.gene56554.t1	MTR_8g062110	40.468	299	140	6	11	301	1	269	3.38e-59	194
MS.gene56554.t1	MTR_8g062110	40.468	299	140	6	11	301	1	269	5.41e-59	193
MS.gene56554.t1	MTR_4g077100	39.474	342	170	11	9	340	1	315	6.03e-59	194
MS.gene56554.t1	MTR_2g101330	36.449	321	182	9	23	340	4	305	2.26e-58	193
MS.gene56554.t1	MTR_4g077100	41.216	296	147	8	9	301	1	272	3.34e-58	191
MS.gene56554.t1	MTR_4g023730	37.423	326	175	8	25	340	9	315	3.79e-58	192
MS.gene56554.t1	MTR_3g005170	38.608	316	165	9	25	333	11	304	5.28e-58	192
MS.gene56554.t1	MTR_4g077130	38.279	337	177	9	11	340	1	313	5.31e-58	192
MS.gene56554.t1	MTR_5g056600	37.888	322	177	8	23	340	3	305	3.68e-57	189
MS.gene56554.t1	MTR_3g005210	36.036	333	183	9	25	346	7	320	4.40e-57	189
MS.gene56554.t1	MTR_3g005170	42.966	263	122	8	25	281	11	251	2.78e-56	186
MS.gene56554.t1	MTR_7g074870	35.052	291	166	6	54	340	3	274	6.51e-52	175
MS.gene56554.t1	MTR_4g009040	36.446	332	187	10	12	339	1	312	1.44e-50	173
MS.gene56554.t1	MTR_5g072620	38.080	323	174	10	25	342	6	307	6.04e-50	171
MS.gene56554.t1	MTR_4g009040	35.843	332	185	10	12	339	1	308	1.25e-49	170
MS.gene56554.t1	MTR_3g031650	34.431	334	170	11	25	341	6	307	2.64e-44	156
MS.gene56554.t1	MTR_4g009690	35.455	330	188	10	12	339	1	307	1.31e-43	154
MS.gene56554.t1	MTR_3g031650	36.620	284	150	9	25	301	6	266	1.83e-43	152
MS.gene56554.t1	MTR_2g104960	36.306	314	170	10	25	333	21	309	2.89e-43	154
MS.gene56554.t1	MTR_4g006940	35.987	314	171	10	25	333	18	306	7.62e-43	152
MS.gene56554.t1	MTR_2g013230	31.195	343	216	8	22	352	6	340	1.36e-42	152
MS.gene56554.t1	MTR_4g009690	35.152	330	190	10	12	339	1	308	2.18e-42	151
MS.gene56554.t1	MTR_7g117190	31.832	333	202	12	22	340	5	326	1.10e-41	150
MS.gene56554.t1	MTR_3g005170	33.544	316	150	9	25	333	11	273	4.52e-40	144
MS.gene56554.t1	MTR_2g013250	31.118	331	204	8	23	340	6	325	4.85e-40	145
MS.gene56554.t1	MTR_7g117190	32.394	284	174	10	22	294	5	281	2.71e-39	142
MS.gene56554.t1	MTR_4g006940	36.014	286	154	9	25	305	18	279	2.69e-38	139
MS.gene56554.t1	MTR_4g006940	36.014	286	154	9	25	305	18	279	2.69e-38	139
MS.gene56554.t1	MTR_2g013260	31.195	343	214	9	22	351	6	339	8.42e-37	137
MS.gene56554.t1	MTR_2g028620	30.159	315	195	10	25	333	11	306	8.13e-34	128
MS.gene56554.t1	MTR_2g013260	31.379	290	180	7	23	301	7	288	3.85e-33	125
MS.gene56554.t1	MTR_2g028620	30.986	284	172	8	25	303	11	275	1.67e-31	122
MS.gene56554.t1	MTR_8g062110	34.375	224	123	5	116	333	11	216	1.41e-27	109
MS.gene56554.t1	MTR_8g062110	36.126	191	99	4	116	301	11	183	9.47e-26	103
MS.gene56554.t1	MTR_0164s0070	31.683	202	118	5	23	220	4	189	1.11e-24	100
MS.gene56554.t1	MTR_5g029990	28.165	316	190	15	25	334	13	297	3.03e-23	99.0
MS.gene56554.t1	MTR_2g013230	28.689	244	164	6	118	352	8	250	4.95e-22	94.7
MS.gene56554.t1	MTR_7g117190	28.440	218	141	8	134	340	3	216	5.48e-19	85.5
MS.gene56554.t1	MTR_6g406250	26.119	268	166	9	25	283	56	300	3.82e-18	85.5
MS.gene56554.t1	MTR_2g013260	27.953	254	159	7	114	351	23	268	1.43e-16	79.7
MS.gene56554.t1	MTR_6g406250	25.571	219	144	6	25	236	56	262	6.08e-15	74.7
MS.gene56554.t1	MTR_8g062710	31.667	120	70	3	5	120	1	112	5.73e-13	65.9
MS.gene56554.t1	MTR_3g101500	23.507	268	174	9	23	290	3	239	1.94e-12	68.2
MS.gene56554.t1	MTR_3g101500	23.507	268	174	9	23	290	3	239	5.28e-12	66.6
MS.gene56554.t1	MTR_3g011130	35.345	116	71	2	119	233	30	142	2.41e-11	61.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene56554.t1	AT4G27250	58.537	328	133	3	16	340	5	332	2.41e-135	391
MS.gene56554.t1	AT4G27250	57.317	328	127	4	16	340	5	322	3.61e-129	375
MS.gene56554.t1	AT5G42800	41.925	322	162	7	25	340	9	311	2.14e-81	254
MS.gene56554.t1	AT4G35420	40.373	322	169	8	22	340	6	307	3.42e-68	218
MS.gene56554.t1	AT1G09510	38.535	314	168	9	25	333	9	302	1.46e-63	206
MS.gene56554.t1	AT1G61720	37.152	323	191	4	21	340	10	323	3.45e-62	203
MS.gene56554.t1	AT1G51410	38.339	313	170	6	25	333	10	303	3.32e-59	195
MS.gene56554.t1	AT1G09490	35.714	322	181	8	25	339	9	311	8.34e-59	194
MS.gene56554.t1	AT1G66800	36.335	322	175	8	25	339	9	307	9.10e-59	194
MS.gene56554.t1	AT5G19440	38.050	318	164	9	25	333	11	304	1.89e-57	191
MS.gene56554.t1	AT1G09480	38.246	285	149	7	1	282	37	297	2.00e-55	187
MS.gene56554.t1	AT2G45400	36.364	330	184	7	21	340	37	350	5.96e-55	185
MS.gene56554.t1	AT1G09480	40.230	261	134	6	25	282	9	250	8.96e-55	184
MS.gene56554.t1	AT1G09500	36.879	282	157	6	25	303	9	272	2.16e-54	181
MS.gene56554.t1	AT1G09500	35.256	312	179	7	25	331	9	302	2.67e-54	182
MS.gene56554.t1	AT5G58490	39.564	321	168	11	25	340	10	309	7.37e-52	176
MS.gene56554.t1	AT1G68540	35.474	327	182	10	22	340	2	307	1.89e-51	175
MS.gene56554.t1	AT2G33590	36.308	325	180	10	19	339	4	305	1.24e-50	173
MS.gene56554.t1	AT2G45400	35.640	289	163	5	21	301	37	310	3.85e-49	169
MS.gene56554.t1	AT2G33600	37.952	332	167	12	18	339	3	305	5.72e-47	163
MS.gene56554.t1	AT2G02400	33.544	316	179	9	25	333	7	298	7.24e-46	160
MS.gene56554.t1	AT1G25460	35.294	323	186	9	22	340	2	305	1.44e-45	159
MS.gene56554.t1	AT1G09490	31.597	288	177	6	47	333	3	271	5.10e-44	154
MS.gene56554.t1	AT1G15950	33.436	326	184	10	25	342	14	314	5.85e-43	153
MS.gene56554.t1	AT2G45400	34.564	298	174	6	48	340	12	293	9.41e-43	152
MS.gene56554.t1	AT1G76470	33.437	323	193	7	23	341	6	310	1.16e-42	152
MS.gene56554.t1	AT1G15950	33.439	314	179	9	25	333	14	302	2.56e-42	151
MS.gene56554.t1	AT1G15950	33.439	314	179	9	25	333	14	302	2.56e-42	151
MS.gene56554.t1	AT1G80820	34.286	315	177	10	25	334	9	298	2.49e-41	149
MS.gene56554.t1	AT1G15950	33.904	292	164	8	25	311	14	281	2.11e-39	142
MS.gene56554.t1	AT1G15950	34.266	286	159	8	25	305	14	275	3.84e-39	141
MS.gene56554.t1	AT1G15950	34.266	286	159	8	25	305	14	275	5.64e-39	141
MS.gene56554.t1	AT1G09500	31.900	279	170	6	54	330	7	267	1.11e-38	140
MS.gene56554.t1	AT2G45400	37.611	226	125	4	21	238	37	254	9.45e-38	137
MS.gene56554.t1	AT1G80820	34.615	286	158	9	25	305	9	270	1.21e-36	134
MS.gene56554.t1	AT2G23910	27.547	265	164	7	25	286	11	250	2.73e-26	107
MS.gene56554.t1	AT2G23910	27.547	265	164	7	25	286	11	250	3.24e-26	106
MS.gene56554.t1	AT2G23910	27.547	265	164	7	25	286	11	250	4.99e-26	107
MS.gene56554.t1	AT4G30470	28.253	269	164	8	21	286	7	249	1.27e-23	100
MS.gene56554.t1	AT1G68540	30.233	215	130	6	131	340	1	200	3.21e-20	88.6
MS.gene56554.t1	AT1G15950	30.275	218	135	7	119	333	1	204	5.77e-18	83.2
MS.gene56554.t1	AT2G23910	26.606	218	135	6	69	286	24	216	5.08e-17	80.9
MS.gene56554.t1	AT4G33360	22.939	279	181	9	23	298	14	261	1.66e-16	80.1
MS.gene56554.t1	AT4G33360	22.939	279	181	9	23	298	14	261	1.77e-16	80.5
MS.gene56554.t1	AT4G33360	22.939	279	181	9	23	298	2	249	2.69e-16	79.7
MS.gene56554.t1	AT5G14700	26.937	271	165	10	25	283	56	305	4.83e-15	76.3
MS.gene56554.t1	AT5G14700	26.244	221	145	7	25	236	56	267	8.68e-12	65.9

Find 86 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTAAATTTGCTAAAGATAA+TGG	0.183537	4.4:+30890605	MS.gene56554:CDS
GCAAGATTTGAGCAGGTTTA+TGG	0.190488	4.4:-30890305	None:intergenic
CTCAAAGAAGCTAAAAGATT+TGG	0.192018	4.4:+30891459	MS.gene56554:CDS
ACACAGTGTCAGTTTGTATT+TGG	0.230014	4.4:-30890432	None:intergenic
ATGCCTGGACTCCACATCTT+TGG	0.242242	4.4:+30892621	MS.gene56554:CDS
GGCACCTGTAACACAATATT+TGG	0.281952	4.4:-30885280	None:intergenic
TTTATGGTTCCTTTGATTGC+AGG	0.296003	4.4:-30890289	None:intergenic
ACTGCCAAATATTGTGTTAC+AGG	0.302149	4.4:+30885276	MS.gene56554:CDS
GTATGCTCCTTCTCCAAGTT+GGG	0.317550	4.4:+30892646	MS.gene56554:CDS
TTAAATTTGCTAAAGATAAT+GGG	0.324810	4.4:+30890606	MS.gene56554:CDS
TCAAAGAAGCTAAAAGATTT+GGG	0.330800	4.4:+30891460	MS.gene56554:CDS
ACAGGTGCCACAGGGTATAT+TGG	0.354757	4.4:+30885294	MS.gene56554:CDS
AGTTGGATTAGAATACTCTT+TGG	0.355460	4.4:-30891294	None:intergenic
TGAAATCCAATTCTGTGAAA+AGG	0.362071	4.4:+30890329	MS.gene56554:CDS
TGATCTTCGCGCCTCATGCC+TGG	0.362792	4.4:+30892606	MS.gene56554:CDS
CAATGCTCACATATTCTTGA+TGG	0.364605	4.4:+30891196	MS.gene56554:CDS
TGCCTGGACTCCACATCTTT+GGG	0.371118	4.4:+30892622	MS.gene56554:CDS
CCACAGGGTATATTGGTTCA+TGG	0.374216	4.4:+30885301	MS.gene56554:CDS
AGCTTCGATGAGGCAGTAAA+AGG	0.376180	4.4:+30890053	MS.gene56554:CDS
GTTATAACAAGCACTGTTGC+AGG	0.378815	4.4:+30890644	MS.gene56554:CDS
TGGCAAGATTCATCAACAAT+AGG	0.382737	4.4:-30890412	None:intergenic
TTTGATGTACTATTTCTTCA+AGG	0.382990	4.4:-30891501	None:intergenic
GAAACAAGAGCTGCCAAGTT+AGG	0.387233	4.4:-30891272	None:intergenic
CGTATGCTCCTTCTCCAAGT+TGG	0.394169	4.4:+30892645	MS.gene56554:CDS
CGCGCTGATTTGCACGAAGA+AGG	0.398678	4.4:+30890029	MS.gene56554:CDS
TAATGGGATTGATCTTGTTT+CGG	0.400774	4.4:+30890622	MS.gene56554:CDS
GAGTATTACCTTAGCGTAGT+TGG	0.404324	4.4:-30891311	None:intergenic
GTTCTGCTGTCCTCACTAAC+AGG	0.415335	4.4:+30890704	MS.gene56554:CDS
GAAATCCAATTCTGTGAAAA+GGG	0.430378	4.4:+30890330	MS.gene56554:CDS
GGTGGTAATGAAGGAAGAAA+TGG	0.456131	4.4:+30885209	None:intergenic
TCTGCTGTAAATGCACGAAT+GGG	0.461394	4.4:+30891140	MS.gene56554:CDS
CATGCTACTGTCAGAGATCC+TGG	0.464239	4.4:+30885360	MS.gene56554:CDS
AAGCTGTACACTGCCTAACT+TGG	0.485427	4.4:+30891259	MS.gene56554:CDS
TTATGGTTCCTTTGATTGCA+GGG	0.488008	4.4:-30890288	None:intergenic
AGCAGAACTTTAACACTTGA+AGG	0.492074	4.4:-30890689	None:intergenic
CCATTACTTACCCATCCACT+TGG	0.492651	4.4:-30890466	None:intergenic
ATCTGCTGTAAATGCACGAA+TGG	0.493103	4.4:+30891139	MS.gene56554:CDS
ATTTCAAGCAAGATTTGAGC+AGG	0.496756	4.4:-30890312	None:intergenic
CTCTGATGTTAAAATAAGAC+AGG	0.500347	4.4:+30892688	MS.gene56554:CDS
CGCCCAAAGATGTGGAGTCC+AGG	0.504394	4.4:-30892624	None:intergenic
ACACCTCCTGTCATTGTGGA+AGG	0.512956	4.4:+30889983	MS.gene56554:CDS
TATTGTGTTACAGGTGCCAC+AGG	0.519643	4.4:+30885285	MS.gene56554:CDS
CTAAAGATAGCAATGGAAAG+TGG	0.532380	4.4:+30890386	MS.gene56554:CDS
CACCACCCTTCCACAATGAC+AGG	0.541255	4.4:-30889989	None:intergenic
GTTGAAGCTCTTCTTCAAAG+AGG	0.555164	4.4:+30885327	MS.gene56554:CDS
GGAATACACAACCAAGTGGA+TGG	0.556204	4.4:+30890455	MS.gene56554:CDS
ATCTCTGACAGTAGCATGAA+CGG	0.558337	4.4:-30885355	None:intergenic
ATAATTGACCCTGCAATCAA+AGG	0.559331	4.4:+30890280	MS.gene56554:CDS
TATGCTCCTTCTCCAAGTTG+GGG	0.559388	4.4:+30892647	MS.gene56554:CDS
AATGGAGGAAGCAATGAGGA+TGG	0.563316	4.4:+30885227	MS.gene56554:CDS
ATTACTGCTAAAGATAGCAA+TGG	0.565154	4.4:+30890379	MS.gene56554:CDS
CGTTACACCTCCTGTCATTG+TGG	0.567359	4.4:+30889979	MS.gene56554:CDS
GGAGCATACGCCCAAAGATG+TGG	0.569024	4.4:-30892632	None:intergenic
ATGGAACATGCTAAAGCAGA+AGG	0.572323	4.4:+30891215	MS.gene56554:CDS
ATGAGGTGGATCACCGGAGT+TGG	0.573080	4.4:+30892578	MS.gene56554:CDS
ATGAGGATGGTGAGAAGCAG+TGG	0.574009	4.4:+30885240	MS.gene56554:CDS
GAACGCATGAGGTGGATCAC+CGG	0.575375	4.4:+30892572	MS.gene56554:CDS
CACCTCCTGTCATTGTGGAA+GGG	0.580068	4.4:+30889984	MS.gene56554:CDS
TTCTTTGAGGAAATTTCAGT+AGG	0.580180	4.4:-30891445	None:intergenic
ATTCTAATCCAACTACGCTA+AGG	0.591677	4.4:+30891303	MS.gene56554:CDS
GGTAATGAAGGAAGAAATGG+AGG	0.593995	4.4:+30885212	None:intergenic
TCCTGTAGGAACGCATGAGG+TGG	0.595447	4.4:+30892564	MS.gene56554:intron
GTAACACAATATTTGGCAGT+AGG	0.604825	4.4:-30885273	None:intergenic
ATGCTCCTTCTCCAAGTTGG+GGG	0.609558	4.4:+30892648	MS.gene56554:CDS
TATAAAGTCACCTGTTAGTG+AGG	0.610455	4.4:-30890714	None:intergenic
GAAGATCACATCACCAACTC+CGG	0.612539	4.4:-30892591	None:intergenic
AAGAAATGGAGGAAGCAATG+AGG	0.616615	4.4:+30885223	MS.gene56554:CDS
GAATACACAACCAAGTGGAT+GGG	0.623474	4.4:+30890456	MS.gene56554:CDS
AGATGTGGAGTCCAGGCATG+AGG	0.624712	4.4:-30892617	None:intergenic
GTTAATGAGAAAGAAAACAT+TGG	0.627963	4.4:+30890119	MS.gene56554:CDS
TGCTCCTTCTCCAAGTTGGG+GGG	0.630711	4.4:+30892649	MS.gene56554:CDS
ATTGCATTGAAGCTGCAACA+TGG	0.647004	4.4:-30890091	None:intergenic
CTCCTGTCATTGTGGAAGGG+TGG	0.654676	4.4:+30889987	MS.gene56554:CDS
GAGGCAGTAAAAGGATGTGA+TGG	0.658885	4.4:+30890062	MS.gene56554:CDS
TGTTCCTGTAGGAACGCATG+AGG	0.659407	4.4:+30892561	MS.gene56554:intron
CGAAGAAGGAAGCTTCGATG+AGG	0.670075	4.4:+30890043	MS.gene56554:CDS
CACCCTTCCACAATGACAGG+AGG	0.673181	4.4:-30889986	None:intergenic
AACATGCTAAAGCAGAAGGT+AGG	0.675020	4.4:+30891219	MS.gene56554:CDS
AAATACAAACTGACACTGTG+TGG	0.677088	4.4:+30890434	MS.gene56554:CDS
CTGCTGTAAATGCACGAATG+GGG	0.681829	4.4:+30891141	MS.gene56554:CDS
GTGTGGAATACACAACCAAG+TGG	0.719552	4.4:+30890451	MS.gene56554:CDS
CTTCTTCGTGCAAATCAGCG+CGG	0.720406	4.4:-30890028	None:intergenic
ATTGTGTTACAGGTGCCACA+GGG	0.721235	4.4:+30885286	MS.gene56554:CDS
GAAGAGTCAGAAATATGACA+AGG	0.727881	4.4:+30891420	MS.gene56554:CDS
TCTGATGTTAAAATAAGACA+GGG	0.734578	4.4:+30892689	MS.gene56554:CDS
CCATGAACCAATATACCCTG+TGG	0.749348	4.4:-30885301	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
chr4.4	gene	30885216	30892724	30885216	ID=MS.gene56554
chr4.4	mRNA	30885216	30892724	30885216	ID=MS.gene56554.t1;Parent=MS.gene56554
chr4.4	exon	30885216	30885381	30885216	ID=MS.gene56554.t1.exon1;Parent=MS.gene56554.t1
chr4.4	CDS	30885216	30885381	30885216	ID=cds.MS.gene56554.t1;Parent=MS.gene56554.t1
chr4.4	exon	30889973	30890140	30889973	ID=MS.gene56554.t1.exon2;Parent=MS.gene56554.t1
chr4.4	CDS	30889973	30890140	30889973	ID=cds.MS.gene56554.t1;Parent=MS.gene56554.t1
chr4.4	exon	30890260	30890477	30890260	ID=MS.gene56554.t1.exon3;Parent=MS.gene56554.t1
chr4.4	CDS	30890260	30890477	30890260	ID=cds.MS.gene56554.t1;Parent=MS.gene56554.t1
chr4.4	exon	30890566	30890725	30890566	ID=MS.gene56554.t1.exon4;Parent=MS.gene56554.t1
chr4.4	CDS	30890566	30890725	30890566	ID=cds.MS.gene56554.t1;Parent=MS.gene56554.t1
chr4.4	exon	30891114	30891324	30891114	ID=MS.gene56554.t1.exon5;Parent=MS.gene56554.t1
chr4.4	CDS	30891114	30891324	30891114	ID=cds.MS.gene56554.t1;Parent=MS.gene56554.t1
chr4.4	exon	30891417	30891513	30891417	ID=MS.gene56554.t1.exon6;Parent=MS.gene56554.t1
chr4.4	CDS	30891417	30891513	30891417	ID=cds.MS.gene56554.t1;Parent=MS.gene56554.t1
chr4.4	exon	30892572	30892724	30892572	ID=MS.gene56554.t1.exon7;Parent=MS.gene56554.t1
chr4.4	CDS	30892572	30892724	30892572	ID=cds.MS.gene56554.t1;Parent=MS.gene56554.t1

Gene Sequence

>MS.gene56554

ATGAAGGAAGAAATGGAGGAAGCAATGAGGATGGTGAGAAGCAGTGGACAAATTGTTCCTACTGCCAAATATTGTGTTACAGGTGCCACAGGGTATATTGGTTCATGGCTTGTTGAAGCTCTTCTTCAAAGAGGTTGCACCGTTCATGCTACTGTCAGAGATCCTGGTTAGTATCCCCATTCAATCTCTTTTTTTCTTAGTACAGGGAGAAAGAATTAGGATCAAATAAATGATCAATTAAAACAGAAGCGTTAATGTGATTTCATTTGAACTTAATTGGTGTTTATTTAATTGATCAATAGGTTTGTAAAATTAGATACTAGGCTATGAAATATTGCATAGTCCTACATTCAATTTTGATGAAGGGGGGACCAACTAGGATGGACATAGCTATACAATTTGATGCACAAGATATGAGTTTGTGTATGTTTGGTTTTGCATAGACAGGAATGATTTTGAGTTGAAGATAAATTAATTTATGTTTGAATATGTTCATGTAAAAGCGAGTTAAACACTAAATTTAAATGTTAAAATCAATTCTAGAATCAAAGGTTATGAATTTTAACTTCAAGTAAAATTAATTCTAGAGATATAATCAATTCTACTTAAGAACAACCAAACACACCATCTGAATTCTACACTTTTAAAATCAATTTTAATCACTTAAACTATGTTTGGTTTTATTTCTAGAGGTGTCAAAATTGATTATGTACATGTAGACTTGATTCTGACATGTTTGATTACAATTGAGTAAAATTCATTCTGCCTCCAGAATTGATTCTACTTGAAGTTAGTATGTGTAACTTTTTATTCTAGAATTGATTTTCACACATAAATAAGAGCCCGTTTGTTATAGTTTTTTTAAGTAAAAAAAATCACTTTTAAAAGTTTTGCATTCGTTTGTTACAACTTTTTTTAAAAATCAAAATCTAAAAAAAATCTAAAAACAGCTTCAAATGAGAAACTGCTAAGAACAACTTCTCAAAAAATAGATTCTTTTTAGAGGAGAGCGAAAATATGGTTTAAAATATTGAACTAATTTTGTAACAAAAAAAATCTCTTTTATATAGTTGTATCTAAACAAACTAAATTATTTGTTTAAAAAAGTGATTTTTATTATGGTAAACAAACGCAAAAGAAATTCTGATTTTTCATAAAATCTCTAAAATATAATCTCTAAATTATTTTATGTCAAAATCAATTTTACATAATCAATTTTATCAAAATCAATTATTCCCACGACACAACCAAACACACACTTTAAAGTATGAAATTAGTCAACGGAAATCAGATTATACATAAATTTCAGTCTTAATTTGTATTTCCCTAAAAAAAGTCTTAATTTGTATTAATTTTGATGGTTTTAACATGTGTTTCTCTAAATTTGATTTTTTTTTAAAGCAAAAGAAGAAAAAGAAAGAAAAAAAGTGGCGTAATTGGAGATTCAGGAAAAGTTTTTCTTTTTTATAGACAAATAGTATTTACTAAATGATAGTTTTATTTTTTTTAAAAAGGAACTCAGTGACTATGTTCTTTTTTTTTTATGTAAAAAAAAAGGAATTCAGTGATTATAGACAAATATTATTTACTAAATGATAGTGTTATTTTCTTAAAAATAAAAAAGGAACTCAGTGACTATGTTCATTTTTTTATGTAAAAAAAAAAAGGAATTCAGTGATTATAGACAAATATCACTTGCTAAGTTTCTACATTTGCATTTTAAACTTGTGCCTTAAGGGCACAAGTTAACATTTTCCTTAAAAATAAATAAGTTGGTATTTATAGTTTCTATCTATCTATATTATGAATGGTATCTATCAACTTACATATTCTCACAAAGACTAGAAGAAGCCTTTTCTAATCATTTAGTTTTAGCAAAGCATTTATGGAATAAAAGTCAACTTATACTCAATTTTGACATCATTGATATCCTAAAATGTGGAAGCATATAAATTTTTTTGGTGAGCAGAACATGTCGATATAGTACTACTTGTCCCTTTTAAAAAAAGAAAAATATAGTAGTACTACTACTTGTGGCCCGTGGCATCATTTCATCTTTTAATAAAATAAAATGAAAATTGCCCTTCTCCCAACAAAAAACATTCACTCCCATACAAATCGATCAAAATATCTTATACGTGAGTTAACTTACGTTCGGTATAACGAAGTATAACCTACATGAGTTAACTCACGCTGGTTTATAACCTGTATGAGTTAACTTACGCTGGGGTATAACCTGCATGAGTTAACTCACGCTGTGGTTATAACCTACGTGATTTAACTCACGTGAGATGTACCATGTAGTGAACGTGATTTAAGTCACACTGGGTATAACACATGAGTGAGTTAATTCTCGCGGGATGTATTTTTATCAGTTTGTATGAGAGTGAGTGTTTTTTTATTGTGAGAAGAGCAATTTTCAAATAAAATTGATCAAGTAGTTGAGCATAAATAATAAATGGACTTTAAATAAACCAAATCCATAGAGACAATTTGAATTTGAGTAGTGATATTTGAACAATTATTTTGGTGCAACTTTTGGAAATGATGAGAGAGAATAAGAACATAATGTGAGTATGAAAGAGAAAAATTGTCTAAAAGTTGTACTAAAATGGTTGTACAAATATAATTTCTCTTTGAAATTGGTGTCTAGTTTTAATAACCATTTTAAGATGAAACTAAATATCAACTCTAGTTAATAACATATACCAAAAGAAAAAACGTTTGAAGAACTCAATTGAAATTTTGAGCTCAACAATATGTAGTCAGACTTTACTTATTTATTGGTCGAATTCGACCAAAGAATTAACCTAAAAGAAAAATCCTTTAAAAAAAGAATTATTTATTAGACAAATTTCTTCCTCTTAAAATGTTTAAATTAACTTGGCGAAAAAGTTTTGGATAGTAAATATAAATCTATAAATTAAGATTTGTAAACCATGTGAAACTGATAAACGATAAACATTTCATTTTAAACAATTGAACGATAAATAATGATATGTTTTTTCTTTTAAAGAGTTTAGCAATGAAACTCACACACACTAGATACAAAGAGTGTTAAATTGTGAGTTCGAACTCGAGTCCAAACATAAATATCCAACAACATATTTGCATATGACGTGAATGTTTTTTTTTTTTTTATATTTTATCCAAAGTCAGTCATATAAATTTTAACAGTTTTACTCATATTTTTAAATTTTACTTTTTATAAATTTGAAAAATATTTACCTTACAGTAATCATCCATGTTGGTGTACTAGAAGCAGGGATTTAATGGGTTGGTTTAGTTCGGTTTTTAGGAGAAAATAAATTCGAATCAATTAAAATAGTCGGTTTGGTTTTAACGATCTTTTCTCAGATATCAAAATCAAACCAAACAATGAAAAACAAGTTTGTTTTATTTGGTTCAATCGGATTGACTTTTTCAAAAATTTATTGAAAAAAAGCAAACAAAAAGTTACTTATTCAAACACTTTTTATACTATTAAAATAAGTACATAAACAGATAAACTACAATGAAATCAATGCATGACTAAATAATTTTTTTTTATCCTTCAAAAAAATAATTTTTTTAAGAAATTCAATGTCTATATGTTTTTTTTTGAGTATAAATTCAATGTCTATATGTTGAAAGTATATTTTTTTAAACATGCATTCAATCAAATCATTTCACAATATCTTTTATTCAGAAAAATTAAAATCATTTCACGATATCTGTTTGGCATGTTTTGATTGAATACATGTGTAAAAAAATTACACCGACACATAAGAAATAATCTTTTTGTTAAGATAAAATCACTAATATAGTGAAATAAAAGAAATAATATTAAAATATGATGGTAATATAGTGAAATAAAAGAAATAATATTAAAAAATATGATGGTTTGATCAGGTCTCGGGTGACTGGTTTCAAACCCGAATTTATAAAAGTCGGGTTTGATTGATTTGGTTTACACCTGAATAAGGACAAAAAATCGAACCAATTTAGTTGAATTTGTTTATATCTTTGGGTTCATCGGAATCGGATCATTTGATTAGGTTTTACACCCCCCTAACTAGAAGAGTAAAATATCCCTTCCCTTGAATGGTTTGGGCCCATTTGGTATTTGTTGGACCATATGCTAAAAACCCATCAACAACCAGACTGTTGCTGTTCTGACATCCAATATGTCTTGGAAACACAAGTAAATGACTAAAAAACCCAGCGGTAGTTAACTGCTGCCGGTTTTCTAGTTATAAGCCAGCGGTAGTTAACTACCGCTGGGAATATTTTAGTATTTTACTTGTATTTTTTAGAAAGTTTATGATGTTAAAAAAACAATTGTCATTGTCCAACAACCAAGGGAATGCTCACAATGAACCTTGTTCATTTCTTCTTAACACTAACAGAAATGAAATTGTATGATCAACAAGGTCGGTGTGACACAACACAAGTGGTAGATTTTTGGTAATGGATTTTATCCGTCAAATTCGTGACCGATGCATATGAAGAAAAAAATTGTTAGTAAAAGCCAACCCTTAAATAAATTTCAGTTACCTCGATAAATAAATTAATTTATGCATTACGCACATAAATATCTTGATTTATCAAAAATAAAAAAAATATGAAACTCTATGATTGATCAGGACTCGGTGATTTCCGTCAAATGTAATGGTAAAAAATGGCCTTTCATTTCGATACATCCTTGATTTAATCCAATGCTTACTAATAATCTCATATATGAATATGATTCATTTTTGTTTGCTCTAATGTCACAGAAAAGTCGTTACACCTCCTGTCATTGTGGAAGGGTGGTGACCAATTGAGATTTTTCCGCGCTGATTTGCACGAAGAAGGAAGCTTCGATGAGGCAGTAAAAGGATGTGATGGTGTGTTCCATGTTGCAGCTTCAATGCAATTCAATGTTAATGAGAAAGAAAACATTGGTAATACAACGCATTGATAATCATCGAAGGACTTAACATATATATTGATTTTTTAAATATTGTTTGTGCATTGGTAACTAACAGATTTTTGATATTTCATCTCGGTATTGAACTTGCAGAGAACTTTGTTCAAACAAATATAATTGACCCTGCAATCAAAGGAACCATAAACCTGCTCAAATCTTGCTTGAAATCCAATTCTGTGAAAAGGGTTGTTTTCACATCTTCTATAAGTACTATTACTGCTAAAGATAGCAATGGAAAGTGGAAACCTATTGTTGATGAATCTTGCCAAATACAAACTGACACTGTGTGGAATACACAACCAAGTGGATGGGTAAGTAATGGTTTCCTTAGCCTACTACTACTAGCATTGTTCACAAAATCGAAAATTGATTTCTTGAGTTTTTCTTTTTTGGTGATAGGTTTATGCGCTTTCAAAGCTTCTCACAGAAGAAGCAGCATTTAAATTTGCTAAAGATAATGGGATTGATCTTGTTTCGGTTATAACAAGCACTGTTGCAGGCCCGTTTTTCACTGCTAATGTACCTTCAAGTGTTAAAGTTCTGCTGTCCTCACTAACAGGTGACTTTATAGTGCAGCAGAATTCGAACAAATTGGTATAAAATGTTGTTAAATAGTGGCGATTGCCGTGCTGTAGAGTTGTAGCATAGCAGAACCTACACACTGCTATTTTTCGCAATCTGCGATTGTGTTTGTAATGAAAGCTAGGCTATGTTACTGAACAAGTTAGTATAAACGTTTATGTCTATAACTTCAACTATGAAAATTAATCATCTCTAGGATCACACCTTAATGTTTACATGTATGAACTGTCTTTTGTACCGAATTCCCCGAGAATATTCAATGTGCATCATAAAGTGTAACATATACAACATTAAACTTCCATGCTTAAAATTCAACACGGGTTATTATAGTGACCACTGACCAAATTGATTATGTCTACATATAGGTGAAACTGAAAACTACAAGATATTATCTGCTGTAAATGCACGAATGGGGTCAATTGCTTTAGTTCACATTGAAGATATATGCAATGCTCACATATTCTTGATGGAACATGCTAAAGCAGAAGGTAGGTACATATGCAGCACACAAAGCTGTACACTGCCTAACTTGGCAGCTCTTGTTTCCAAAGAGTATTCTAATCCAACTACGCTAAGGTAATACTCTTTCCTTTTTTTAATATGTGTATTAAATTCTTCAGGTTTTTTTTAATTCATATTTCTGATGTTGTTCCTACACATATATGCAGCAGGAAGAGTCAGAAATATGACAAGGTTCCTACTGAAATTTCCTCAAAGAAGCTAAAAGATTTGGGTTTCAGTTACAAGCATAGCCTTGAAGAAATAGTACATCAAACAATTATGTGTTGCCTAGATTATGGTTATTTACCTTCTGTTTAGCTACTAGTCTTTCAATGCCACTCTGTACATGATTCAAAGTAATTGAGCTTTTGTAGTTTTTTCACAAAAATAAATAAGGCAAAACTGCAGTATGGGTCTTTTAACTTGATTTAAAGTTTCAAATGTTACTTTTTTTGGTATCAAGTTAGTCATTTTTTTTCATGTAATGTTGGTCTTTTGGTAAACACTACAATACCCCCTGTGTTGCACGGGTGCGGGTACGGGATACGACATTTCTCAAAAAACAAAGGTACGGGTACGTTAAAAGGGCAACCCGGTGCACTGAACCTCCCGCATATGCAGGGTCCGGGAAGGGGTCCCACCAATTGGTGTATTGTACGCAGCCTCCCTGTTTTTACACAAGAGGTTGCTTCCAGGACTTGAACCTGTGACCTTACAGTCACATGACAACAACTTTACCAGTTGCGACAAGGTTACCCCTCTAAAAAAAATTATAGCAATTCTGTCAGGATAAAAAAAAAATTAATTTAAAATAACATAGCATGAGGAAATTATATTGCTAAACCAGCGGATTCAAACTTGTAGTTCCAGTAGGAAAAGGAACATGTACTGGATTTGCTTTTTCATTAGCAATTCTGTCAAGTTCTTTCATCTCAGCAAGATATTCATTCGTCACTTTTGGACAAATAGCTATCCCTTTTTCTTTTCTTGGAGCAAATGACATCTTATTCTAAAATAAGAACCCTTGTATGATATATTGCAATAGTTGCAGTTCCAGGTTGCATTATTTCCTTTTCCTTCACATTTAATTTTAAATGAAAAACCTCATTTTCTCAAGAAAAAAACGGTTATGCGTACCCTGAGAGTATCACCGTCGTACCGTAACCTACCAAGGTTTAAAAAAAAAAAAAATTGGTACATCATGGGTGCGTACAGTACTAGTACCAGTACCAGCGGAGTACCCGGTACGGGTATGTTTTGCAAATTGGAGTACCTGTACTTCAAAGAATACCCCAAATTTTTGTTGCGCATTGTTCCTGTAGGAACGCATGAGGTGGATCACCGGAGTTGGTGATGTGATCTTCGCGCCTCATGCCTGGACTCCACATCTTTGGGCGTATGCTCCTTCTCCAAGTTGGGGGGTGTACTTGGAAAGACACTCTGATGTTAAAATAAGACAGGGTGTGAGCACATAG

Protein sequence

>MS.gene56554.t1

MKEEMEEAMRMVRSSGQIVPTAKYCVTGATGYIGSWLVEALLQRGCTVHATVRDPEKSLHLLSLWKGGDQLRFFRADLHEEGSFDEAVKGCDGVFHVAASMQFNVNEKENIENFVQTNIIDPAIKGTINLLKSCLKSNSVKRVVFTSSISTITAKDSNGKWKPIVDESCQIQTDTVWNTQPSGWVYALSKLLTEEAAFKFAKDNGIDLVSVITSTVAGPFFTANVPSSVKVLLSSLTGETENYKILSAVNARMGSIALVHIEDICNAHIFLMEHAKAEGRYICSTQSCTLPNLAALVSKEYSNPTTLSRKSQKYDKVPTEISSKKLKDLGFSYKHSLEEIERMRWITGVGDVIFAPHAWTPHLWAYAPSPSWGVYLERHSDVKIRQGVST