Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006771.t1 | XP_013456728.1 | 97.1 | 342 | 10 | 0 | 1 | 342 | 1 | 342 | 4.80E-185 | 657.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006771.t1 | Q5XLY0 | 45.9 | 327 | 158 | 5 | 21 | 340 | 12 | 326 | 3.1e-71 | 270.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006771.t1 | A0A072ULV1 | 97.1 | 342 | 10 | 0 | 1 | 342 | 1 | 342 | 3.5e-185 | 657.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene92809 | MS.gene006771 | PPI |
MS.gene27551 | MS.gene006771 | PPI |
MS.gene016249 | MS.gene006771 | PPI |
MS.gene006771 | MS.gene016245 | PPI |
MS.gene006771 | MS.gene27552 | PPI |
MS.gene92810 | MS.gene006771 | PPI |
MS.gene006771 | MS.gene92812 | PPI |
MS.gene006771 | MS.gene27775 | PPI |
MS.gene006771 | MS.gene27779 | PPI |
MS.gene028567 | MS.gene006771 | PPI |
MS.gene27776 | MS.gene006771 | PPI |
MS.gene071401 | MS.gene006771 | PPI |
MS.gene006771 | MS.gene016246 | PPI |
MS.gene006771 | MS.gene40154 | PPI |
MS.gene006771 | MS.gene92808 | PPI |
MS.gene006771 | MS.gene016248 | PPI |
MS.gene006771 | MS.gene27778 | PPI |
MS.gene006771 | MS.gene92811 | PPI |
MS.gene006771 | MS.gene40148 | PPI |
MS.gene006771 | MS.gene27554 | PPI |
MS.gene006771 | MS.gene27550 | PPI |
MS.gene27553 | MS.gene006771 | PPI |
MS.gene006771 | MS.gene071398 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006771.t1 | MTR_4g081440 | 97.076 | 342 | 10 | 0 | 1 | 342 | 1 | 342 | 0.0 | 686 |
MS.gene006771.t1 | MTR_4g081440 | 96.746 | 338 | 10 | 1 | 5 | 342 | 1 | 337 | 0.0 | 672 |
MS.gene006771.t1 | MTR_1g022445 | 43.425 | 327 | 150 | 8 | 25 | 340 | 9 | 311 | 4.65e-88 | 269 |
MS.gene006771.t1 | MTR_1g022440 | 41.896 | 327 | 155 | 8 | 25 | 340 | 9 | 311 | 2.26e-82 | 255 |
MS.gene006771.t1 | MTR_4g092080 | 38.580 | 324 | 179 | 6 | 23 | 339 | 13 | 323 | 1.93e-70 | 224 |
MS.gene006771.t1 | MTR_7g074880 | 38.037 | 326 | 176 | 8 | 22 | 340 | 6 | 312 | 3.73e-69 | 221 |
MS.gene006771.t1 | MTR_7g074730 | 37.117 | 326 | 181 | 7 | 22 | 340 | 6 | 314 | 1.96e-67 | 216 |
MS.gene006771.t1 | MTR_7g074850 | 37.423 | 326 | 181 | 8 | 22 | 340 | 6 | 315 | 1.12e-66 | 214 |
MS.gene006771.t1 | MTR_7g074820 | 37.730 | 326 | 180 | 9 | 22 | 340 | 6 | 315 | 3.57e-64 | 208 |
MS.gene006771.t1 | MTR_8g062440 | 38.757 | 338 | 166 | 7 | 25 | 346 | 9 | 321 | 1.45e-63 | 206 |
MS.gene006771.t1 | MTR_8g062440 | 38.643 | 339 | 166 | 7 | 25 | 346 | 9 | 322 | 2.27e-63 | 206 |
MS.gene006771.t1 | MTR_7g074710 | 34.356 | 326 | 188 | 7 | 22 | 340 | 6 | 312 | 4.38e-62 | 202 |
MS.gene006771.t1 | MTR_8g062440 | 42.807 | 285 | 130 | 5 | 25 | 301 | 9 | 268 | 1.16e-61 | 201 |
MS.gene006771.t1 | MTR_8g062110 | 39.937 | 318 | 157 | 7 | 25 | 333 | 10 | 302 | 2.48e-61 | 200 |
MS.gene006771.t1 | MTR_8g062110 | 39.937 | 318 | 157 | 7 | 25 | 333 | 19 | 311 | 3.15e-61 | 200 |
MS.gene006771.t1 | MTR_8g062110 | 41.754 | 285 | 133 | 5 | 25 | 301 | 10 | 269 | 1.74e-59 | 194 |
MS.gene006771.t1 | MTR_8g062110 | 41.754 | 285 | 133 | 5 | 25 | 301 | 10 | 269 | 3.13e-59 | 194 |
MS.gene006771.t1 | MTR_4g077100 | 40.491 | 326 | 162 | 10 | 25 | 340 | 12 | 315 | 4.81e-59 | 194 |
MS.gene006771.t1 | MTR_3g005170 | 38.924 | 316 | 164 | 9 | 25 | 333 | 11 | 304 | 7.49e-59 | 194 |
MS.gene006771.t1 | MTR_4g023730 | 37.423 | 326 | 175 | 8 | 25 | 340 | 9 | 315 | 8.96e-59 | 194 |
MS.gene006771.t1 | MTR_2g101330 | 36.449 | 321 | 182 | 9 | 23 | 340 | 4 | 305 | 1.30e-58 | 193 |
MS.gene006771.t1 | MTR_4g077130 | 39.009 | 323 | 171 | 8 | 25 | 340 | 10 | 313 | 2.49e-58 | 192 |
MS.gene006771.t1 | MTR_4g077100 | 42.500 | 280 | 139 | 7 | 25 | 301 | 12 | 272 | 2.70e-58 | 191 |
MS.gene006771.t1 | MTR_5g056600 | 38.199 | 322 | 176 | 8 | 23 | 340 | 3 | 305 | 4.50e-58 | 192 |
MS.gene006771.t1 | MTR_3g005210 | 36.336 | 333 | 182 | 9 | 25 | 346 | 7 | 320 | 6.12e-58 | 191 |
MS.gene006771.t1 | MTR_3g005170 | 40.636 | 283 | 140 | 8 | 25 | 301 | 11 | 271 | 2.26e-56 | 186 |
MS.gene006771.t1 | MTR_7g074870 | 35.052 | 291 | 166 | 6 | 54 | 340 | 3 | 274 | 1.26e-52 | 177 |
MS.gene006771.t1 | MTR_5g072620 | 38.217 | 314 | 169 | 9 | 25 | 333 | 6 | 299 | 3.66e-50 | 171 |
MS.gene006771.t1 | MTR_4g009040 | 37.072 | 321 | 178 | 10 | 23 | 339 | 12 | 312 | 7.31e-50 | 171 |
MS.gene006771.t1 | MTR_4g009040 | 36.449 | 321 | 176 | 10 | 23 | 339 | 12 | 308 | 8.11e-49 | 168 |
MS.gene006771.t1 | MTR_3g031650 | 34.731 | 334 | 169 | 11 | 25 | 341 | 6 | 307 | 3.90e-45 | 158 |
MS.gene006771.t1 | MTR_3g031650 | 36.972 | 284 | 149 | 9 | 25 | 301 | 6 | 266 | 2.84e-44 | 154 |
MS.gene006771.t1 | MTR_2g104960 | 36.306 | 314 | 170 | 10 | 25 | 333 | 21 | 309 | 1.34e-43 | 154 |
MS.gene006771.t1 | MTR_4g006940 | 35.987 | 314 | 171 | 10 | 25 | 333 | 18 | 306 | 2.40e-43 | 154 |
MS.gene006771.t1 | MTR_4g009690 | 36.050 | 319 | 179 | 10 | 23 | 339 | 12 | 307 | 6.25e-43 | 152 |
MS.gene006771.t1 | MTR_2g013230 | 31.287 | 342 | 215 | 8 | 23 | 352 | 7 | 340 | 3.63e-42 | 150 |
MS.gene006771.t1 | MTR_4g009690 | 35.737 | 319 | 181 | 10 | 23 | 339 | 12 | 308 | 8.78e-42 | 149 |
MS.gene006771.t1 | MTR_7g117190 | 31.832 | 333 | 202 | 12 | 22 | 340 | 5 | 326 | 2.68e-41 | 148 |
MS.gene006771.t1 | MTR_3g005170 | 33.861 | 316 | 149 | 9 | 25 | 333 | 11 | 273 | 4.01e-41 | 147 |
MS.gene006771.t1 | MTR_2g013250 | 31.118 | 331 | 204 | 8 | 23 | 340 | 6 | 325 | 1.22e-39 | 144 |
MS.gene006771.t1 | MTR_7g117190 | 32.509 | 283 | 173 | 10 | 23 | 294 | 6 | 281 | 7.53e-39 | 141 |
MS.gene006771.t1 | MTR_4g006940 | 36.014 | 286 | 154 | 9 | 25 | 305 | 18 | 279 | 8.29e-39 | 140 |
MS.gene006771.t1 | MTR_4g006940 | 36.014 | 286 | 154 | 9 | 25 | 305 | 18 | 279 | 8.29e-39 | 140 |
MS.gene006771.t1 | MTR_2g013260 | 31.487 | 343 | 213 | 9 | 22 | 351 | 6 | 339 | 4.20e-37 | 137 |
MS.gene006771.t1 | MTR_2g028620 | 30.476 | 315 | 194 | 10 | 25 | 333 | 11 | 306 | 2.34e-34 | 130 |
MS.gene006771.t1 | MTR_2g013260 | 31.724 | 290 | 179 | 7 | 23 | 301 | 7 | 288 | 3.03e-33 | 125 |
MS.gene006771.t1 | MTR_2g028620 | 31.338 | 284 | 171 | 8 | 25 | 303 | 11 | 275 | 2.32e-32 | 124 |
MS.gene006771.t1 | MTR_8g062110 | 34.821 | 224 | 122 | 5 | 116 | 333 | 11 | 216 | 1.69e-28 | 111 |
MS.gene006771.t1 | MTR_8g062110 | 36.649 | 191 | 98 | 4 | 116 | 301 | 11 | 183 | 1.14e-26 | 105 |
MS.gene006771.t1 | MTR_0164s0070 | 30.876 | 217 | 130 | 5 | 23 | 235 | 4 | 204 | 5.79e-25 | 101 |
MS.gene006771.t1 | MTR_5g029990 | 28.165 | 316 | 190 | 15 | 25 | 334 | 13 | 297 | 4.00e-23 | 98.6 |
MS.gene006771.t1 | MTR_2g013230 | 28.689 | 244 | 164 | 6 | 118 | 352 | 8 | 250 | 4.15e-22 | 94.7 |
MS.gene006771.t1 | MTR_7g117190 | 28.440 | 218 | 141 | 8 | 134 | 340 | 3 | 216 | 4.35e-19 | 85.9 |
MS.gene006771.t1 | MTR_6g406250 | 26.493 | 268 | 165 | 9 | 25 | 283 | 56 | 300 | 6.74e-19 | 87.4 |
MS.gene006771.t1 | MTR_2g013260 | 28.235 | 255 | 159 | 7 | 113 | 351 | 22 | 268 | 2.53e-17 | 81.6 |
MS.gene006771.t1 | MTR_6g406250 | 26.027 | 219 | 143 | 6 | 25 | 236 | 56 | 262 | 1.05e-15 | 76.6 |
MS.gene006771.t1 | MTR_8g062710 | 32.500 | 120 | 69 | 3 | 5 | 120 | 1 | 112 | 9.67e-14 | 67.8 |
MS.gene006771.t1 | MTR_3g101500 | 23.297 | 279 | 180 | 10 | 23 | 298 | 3 | 250 | 2.06e-13 | 70.9 |
MS.gene006771.t1 | MTR_3g101500 | 23.297 | 279 | 180 | 10 | 23 | 298 | 3 | 250 | 5.07e-13 | 69.3 |
MS.gene006771.t1 | MTR_3g011130 | 35.345 | 116 | 71 | 2 | 119 | 233 | 30 | 142 | 2.31e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006771.t1 | AT4G27250 | 59.133 | 323 | 129 | 3 | 21 | 340 | 10 | 332 | 1.57e-135 | 391 |
MS.gene006771.t1 | AT4G27250 | 57.895 | 323 | 123 | 4 | 21 | 340 | 10 | 322 | 3.30e-129 | 375 |
MS.gene006771.t1 | AT5G42800 | 41.925 | 322 | 162 | 7 | 25 | 340 | 9 | 311 | 7.73e-82 | 255 |
MS.gene006771.t1 | AT4G35420 | 40.373 | 322 | 169 | 8 | 22 | 340 | 6 | 307 | 1.74e-68 | 219 |
MS.gene006771.t1 | AT1G09510 | 38.535 | 314 | 168 | 9 | 25 | 333 | 9 | 302 | 2.58e-64 | 208 |
MS.gene006771.t1 | AT1G61720 | 37.152 | 323 | 191 | 4 | 21 | 340 | 10 | 323 | 1.09e-61 | 202 |
MS.gene006771.t1 | AT1G51410 | 38.658 | 313 | 169 | 6 | 25 | 333 | 10 | 303 | 5.33e-60 | 197 |
MS.gene006771.t1 | AT1G09490 | 35.714 | 322 | 181 | 8 | 25 | 339 | 9 | 311 | 1.51e-59 | 196 |
MS.gene006771.t1 | AT1G66800 | 36.335 | 322 | 175 | 8 | 25 | 339 | 9 | 307 | 8.72e-59 | 194 |
MS.gene006771.t1 | AT5G19440 | 38.365 | 318 | 163 | 9 | 25 | 333 | 11 | 304 | 2.65e-58 | 192 |
MS.gene006771.t1 | AT2G45400 | 36.667 | 330 | 183 | 7 | 21 | 340 | 37 | 350 | 5.21e-56 | 187 |
MS.gene006771.t1 | AT1G09480 | 35.144 | 313 | 180 | 7 | 25 | 333 | 9 | 302 | 1.33e-55 | 185 |
MS.gene006771.t1 | AT1G09480 | 35.144 | 313 | 180 | 7 | 25 | 333 | 56 | 349 | 2.38e-55 | 186 |
MS.gene006771.t1 | AT1G09500 | 35.256 | 312 | 179 | 7 | 25 | 331 | 9 | 302 | 7.58e-55 | 184 |
MS.gene006771.t1 | AT1G09500 | 36.879 | 282 | 157 | 6 | 25 | 303 | 9 | 272 | 8.07e-55 | 182 |
MS.gene006771.t1 | AT1G68540 | 35.780 | 327 | 181 | 10 | 22 | 340 | 2 | 307 | 1.17e-52 | 177 |
MS.gene006771.t1 | AT5G58490 | 39.564 | 321 | 168 | 11 | 25 | 340 | 10 | 309 | 2.40e-52 | 177 |
MS.gene006771.t1 | AT2G33590 | 36.308 | 325 | 180 | 10 | 19 | 339 | 4 | 305 | 6.22e-51 | 173 |
MS.gene006771.t1 | AT2G45400 | 35.986 | 289 | 162 | 5 | 21 | 301 | 37 | 310 | 2.56e-50 | 172 |
MS.gene006771.t1 | AT2G33600 | 37.952 | 332 | 167 | 12 | 18 | 339 | 3 | 305 | 1.96e-47 | 164 |
MS.gene006771.t1 | AT1G25460 | 35.604 | 323 | 185 | 9 | 22 | 340 | 2 | 305 | 1.20e-46 | 162 |
MS.gene006771.t1 | AT2G02400 | 33.861 | 316 | 178 | 9 | 25 | 333 | 7 | 298 | 1.40e-46 | 162 |
MS.gene006771.t1 | AT1G09490 | 31.597 | 288 | 177 | 6 | 47 | 333 | 3 | 271 | 1.08e-44 | 156 |
MS.gene006771.t1 | AT2G45400 | 34.899 | 298 | 173 | 6 | 48 | 340 | 12 | 293 | 8.82e-44 | 154 |
MS.gene006771.t1 | AT1G15950 | 33.439 | 314 | 179 | 9 | 25 | 333 | 14 | 302 | 6.61e-43 | 152 |
MS.gene006771.t1 | AT1G76470 | 33.437 | 323 | 193 | 7 | 23 | 341 | 6 | 310 | 1.13e-42 | 152 |
MS.gene006771.t1 | AT1G15950 | 33.439 | 314 | 179 | 9 | 25 | 333 | 14 | 302 | 1.23e-42 | 152 |
MS.gene006771.t1 | AT1G15950 | 33.439 | 314 | 179 | 9 | 25 | 333 | 14 | 302 | 1.23e-42 | 152 |
MS.gene006771.t1 | AT1G80820 | 34.286 | 315 | 177 | 10 | 25 | 334 | 9 | 298 | 1.16e-41 | 149 |
MS.gene006771.t1 | AT1G15950 | 33.904 | 292 | 164 | 8 | 25 | 311 | 14 | 281 | 7.71e-40 | 143 |
MS.gene006771.t1 | AT1G15950 | 34.266 | 286 | 159 | 8 | 25 | 305 | 14 | 275 | 1.17e-39 | 142 |
MS.gene006771.t1 | AT1G15950 | 34.266 | 286 | 159 | 8 | 25 | 305 | 14 | 275 | 1.56e-39 | 142 |
MS.gene006771.t1 | AT1G09500 | 31.900 | 279 | 170 | 6 | 54 | 330 | 7 | 267 | 3.87e-39 | 141 |
MS.gene006771.t1 | AT2G45400 | 38.053 | 226 | 124 | 4 | 21 | 238 | 37 | 254 | 1.16e-38 | 139 |
MS.gene006771.t1 | AT1G80820 | 34.615 | 286 | 158 | 9 | 25 | 305 | 9 | 270 | 4.65e-37 | 135 |
MS.gene006771.t1 | AT2G23910 | 27.547 | 265 | 164 | 7 | 25 | 286 | 11 | 250 | 5.91e-26 | 105 |
MS.gene006771.t1 | AT2G23910 | 27.547 | 265 | 164 | 7 | 25 | 286 | 11 | 250 | 7.52e-26 | 105 |
MS.gene006771.t1 | AT2G23910 | 27.547 | 265 | 164 | 7 | 25 | 286 | 11 | 250 | 1.07e-25 | 105 |
MS.gene006771.t1 | AT4G30470 | 28.253 | 269 | 164 | 8 | 21 | 286 | 7 | 249 | 3.06e-23 | 99.0 |
MS.gene006771.t1 | AT1G68540 | 30.698 | 215 | 129 | 6 | 131 | 340 | 1 | 200 | 4.67e-21 | 90.9 |
MS.gene006771.t1 | AT1G15950 | 30.275 | 218 | 135 | 7 | 119 | 333 | 1 | 204 | 2.67e-18 | 84.0 |
MS.gene006771.t1 | AT4G33360 | 22.939 | 279 | 181 | 9 | 23 | 298 | 14 | 261 | 2.46e-17 | 82.8 |
MS.gene006771.t1 | AT4G33360 | 22.939 | 279 | 181 | 9 | 23 | 298 | 14 | 261 | 2.85e-17 | 82.0 |
MS.gene006771.t1 | AT4G33360 | 22.939 | 279 | 181 | 9 | 23 | 298 | 2 | 249 | 4.01e-17 | 82.0 |
MS.gene006771.t1 | AT2G23910 | 26.606 | 218 | 135 | 6 | 69 | 286 | 24 | 216 | 1.05e-16 | 79.7 |
MS.gene006771.t1 | AT5G14700 | 26.937 | 271 | 165 | 10 | 25 | 283 | 56 | 305 | 3.70e-15 | 76.6 |
MS.gene006771.t1 | AT5G14700 | 26.244 | 221 | 145 | 7 | 25 | 236 | 56 | 267 | 7.98e-12 | 65.9 |
Find 83 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTAAATTTGCTAAAGATAA+TGG | 0.183537 | 4.1:+25505251 | MS.gene006771:CDS |
GCAAGATTTGAGCAGGTTTA+TGG | 0.190488 | 4.1:-25504951 | None:intergenic |
CAATGCACACATATTCTTAA+TGG | 0.229405 | 4.1:+25505724 | MS.gene006771:CDS |
ACACAGTGTCAGTTTGTATT+TGG | 0.230014 | 4.1:-25505078 | None:intergenic |
ATGCCTGGACTCCACATCTT+TGG | 0.242242 | 4.1:+25506371 | MS.gene006771:CDS |
GGCACCTGTAACACAATATT+TGG | 0.281952 | 4.1:-25498877 | None:intergenic |
TTTATGGTTCCTTTGATTGC+AGG | 0.296003 | 4.1:-25504935 | None:intergenic |
GTACGCTCCTTCTCCAAGTT+GGG | 0.300401 | 4.1:+25506396 | MS.gene006771:CDS |
ACTGCCAAATATTGTGTTAC+AGG | 0.302149 | 4.1:+25498873 | MS.gene006771:CDS |
CTCAAAGAAACTAAAAGATC+TGG | 0.318600 | 4.1:+25505987 | MS.gene006771:CDS |
TTAAATTTGCTAAAGATAAT+GGG | 0.324810 | 4.1:+25505252 | MS.gene006771:CDS |
ACAGGTGCCACAGGGTATAT+TGG | 0.354757 | 4.1:+25498891 | MS.gene006771:CDS |
AGTTGGATTAGAATACTCTT+TGG | 0.355460 | 4.1:-25505822 | None:intergenic |
TGAAATCCAATTCTGTGAAA+AGG | 0.362071 | 4.1:+25504975 | MS.gene006771:CDS |
TGATCTTCGCGCCTCATGCC+TGG | 0.362792 | 4.1:+25506356 | MS.gene006771:CDS |
TGCCTGGACTCCACATCTTT+GGG | 0.371118 | 4.1:+25506372 | MS.gene006771:CDS |
CCACAGGGTATATTGGTTCA+TGG | 0.374216 | 4.1:+25498898 | MS.gene006771:CDS |
AGCTTCGATGAGGCAGTAAA+AGG | 0.376180 | 4.1:+25504697 | MS.gene006771:CDS |
GTTATAACAAGCACTGTTGC+AGG | 0.378815 | 4.1:+25505290 | MS.gene006771:CDS |
TGGCAAGATTCATCAACAAT+AGG | 0.382737 | 4.1:-25505058 | None:intergenic |
TTTGATGTACTATTTCTTCA+AGG | 0.382990 | 4.1:-25506029 | None:intergenic |
CGTACGCTCCTTCTCCAAGT+TGG | 0.395103 | 4.1:+25506395 | MS.gene006771:CDS |
TAATGGGATTGATCTTGTTT+CGG | 0.400774 | 4.1:+25505268 | MS.gene006771:CDS |
GAGTGTTACCTTAGCGTAGT+TGG | 0.408387 | 4.1:-25505839 | None:intergenic |
GTTCTGCTGTCCTCACTAAC+AGG | 0.415335 | 4.1:+25505350 | MS.gene006771:CDS |
CGCGCTGATTTGAACGAAGA+AGG | 0.416909 | 4.1:+25504673 | MS.gene006771:CDS |
GAAATCCAATTCTGTGAAAA+GGG | 0.430378 | 4.1:+25504976 | MS.gene006771:CDS |
GGTGGTAATGAAGGAAGAAA+TGG | 0.456131 | 4.1:+25498806 | None:intergenic |
TCTGCTGTAAATGCACGAAT+GGG | 0.461394 | 4.1:+25505668 | MS.gene006771:CDS |
CATGCTACTGTCAGAGATCC+TGG | 0.464239 | 4.1:+25498957 | MS.gene006771:CDS |
AAGCTGTACACTGTCTAACT+TGG | 0.483131 | 4.1:+25505787 | MS.gene006771:CDS |
TTATGGTTCCTTTGATTGCA+GGG | 0.488008 | 4.1:-25504934 | None:intergenic |
AGCAGAACTTTAACACTTGA+AGG | 0.492074 | 4.1:-25505335 | None:intergenic |
CCATTACTTACCCATCCACT+TGG | 0.492651 | 4.1:-25505112 | None:intergenic |
ATCTGCTGTAAATGCACGAA+TGG | 0.493103 | 4.1:+25505667 | MS.gene006771:CDS |
TCAAAGAAACTAAAAGATCT+GGG | 0.495370 | 4.1:+25505988 | MS.gene006771:CDS |
ATTTCAAGCAAGATTTGAGC+AGG | 0.496756 | 4.1:-25504958 | None:intergenic |
CGCCCAAAGATGTGGAGTCC+AGG | 0.504394 | 4.1:-25506374 | None:intergenic |
ACACCTCCTGTCATTGTGGA+AGG | 0.512956 | 4.1:+25504627 | MS.gene006771:CDS |
TACGCTCCTTCTCCAAGTTG+GGG | 0.513899 | 4.1:+25506397 | MS.gene006771:CDS |
TATTGTGTTACAGGTGCCAC+AGG | 0.519643 | 4.1:+25498882 | MS.gene006771:CDS |
CGCTCCTTCTCCAAGTTGGG+GGG | 0.520681 | 4.1:+25506399 | MS.gene006771:CDS |
CTAAAGATAGCAATGGAAAG+TGG | 0.532380 | 4.1:+25505032 | MS.gene006771:CDS |
CACCACCCTTCCACAATGAC+AGG | 0.541255 | 4.1:-25504633 | None:intergenic |
GTTGAAGCTCTTCTTCAAAG+AGG | 0.555164 | 4.1:+25498924 | MS.gene006771:CDS |
GGAATACACAACCAAGTGGA+TGG | 0.556204 | 4.1:+25505101 | MS.gene006771:CDS |
ATCTCTGACAGTAGCATGAA+CGG | 0.558337 | 4.1:-25498952 | None:intergenic |
ATAATTGACCCTGCAATCAA+AGG | 0.559331 | 4.1:+25504926 | MS.gene006771:CDS |
AATGGAGGAAGCAATGAGGA+TGG | 0.563316 | 4.1:+25498824 | MS.gene006771:CDS |
ATTACTGCTAAAGATAGCAA+TGG | 0.565154 | 4.1:+25505025 | MS.gene006771:CDS |
CGTTACACCTCCTGTCATTG+TGG | 0.567359 | 4.1:+25504623 | MS.gene006771:CDS |
ATGGAACATGCTAAAGCAGA+AGG | 0.567942 | 4.1:+25505743 | MS.gene006771:CDS |
GGAGCGTACGCCCAAAGATG+TGG | 0.569024 | 4.1:-25506382 | None:intergenic |
CACCTCCTGTCATTGTGGAA+GGG | 0.580068 | 4.1:+25504628 | MS.gene006771:CDS |
TTCTTTGAGGAAATTTCAGT+AGG | 0.582662 | 4.1:-25505973 | None:intergenic |
ATTCTAATCCAACTACGCTA+AGG | 0.591677 | 4.1:+25505831 | MS.gene006771:CDS |
GAACACATGAGGTGGATCAC+CGG | 0.592249 | 4.1:+25506322 | MS.gene006771:CDS |
GGTAATGAAGGAAGAAATGG+AGG | 0.593995 | 4.1:+25498809 | None:intergenic |
ATGAGGTGGATCACCGGAGT+TGG | 0.596042 | 4.1:+25506328 | MS.gene006771:CDS |
ACGCTCCTTCTCCAAGTTGG+GGG | 0.599661 | 4.1:+25506398 | MS.gene006771:CDS |
GTAACACAATATTTGGCAGT+AGG | 0.604825 | 4.1:-25498870 | None:intergenic |
GCTCCTTCTCCAAGTTGGGG+GGG | 0.605117 | 4.1:+25506400 | MS.gene006771:CDS |
TATAAAGTCACCTGTTAGTG+AGG | 0.610455 | 4.1:-25505360 | None:intergenic |
GAAGATCACATCACCAACTC+CGG | 0.612539 | 4.1:-25506341 | None:intergenic |
AAGAAATGGAGGAAGCAATG+AGG | 0.616615 | 4.1:+25498820 | MS.gene006771:CDS |
GAATACACAACCAAGTGGAT+GGG | 0.623474 | 4.1:+25505102 | MS.gene006771:CDS |
AGATGTGGAGTCCAGGCATG+AGG | 0.624712 | 4.1:-25506367 | None:intergenic |
TCCTGTAGGAACACATGAGG+TGG | 0.627352 | 4.1:+25506314 | MS.gene006771:intron |
GTTAATGAGAAAGAAAACAT+TGG | 0.627963 | 4.1:+25504763 | MS.gene006771:CDS |
ATTGCATTGAAGCTGCAACA+TGG | 0.647004 | 4.1:-25504735 | None:intergenic |
CTCCTGTCATTGTGGAAGGG+TGG | 0.654676 | 4.1:+25504631 | MS.gene006771:CDS |
GAGGCAGTAAAAGGATGTGA+TGG | 0.658885 | 4.1:+25504706 | MS.gene006771:CDS |
CGAAGAAGGAAGCTTCGATG+AGG | 0.660445 | 4.1:+25504687 | MS.gene006771:CDS |
CACCCTTCCACAATGACAGG+AGG | 0.673181 | 4.1:-25504630 | None:intergenic |
AACATGCTAAAGCAGAAGGT+AGG | 0.675020 | 4.1:+25505747 | MS.gene006771:CDS |
AAATACAAACTGACACTGTG+TGG | 0.677088 | 4.1:+25505080 | MS.gene006771:CDS |
CTGCTGTAAATGCACGAATG+GGG | 0.681829 | 4.1:+25505669 | MS.gene006771:CDS |
TGTTCCTGTAGGAACACATG+AGG | 0.689751 | 4.1:+25506311 | MS.gene006771:intron |
GTGTGGAATACACAACCAAG+TGG | 0.719552 | 4.1:+25505097 | MS.gene006771:CDS |
ATTGTGTTACAGGTGCCACA+GGG | 0.721235 | 4.1:+25498883 | MS.gene006771:CDS |
CTTCTTCGTTCAAATCAGCG+CGG | 0.722606 | 4.1:-25504672 | None:intergenic |
GAAGAGTCAGAAATATGACA+AGG | 0.727881 | 4.1:+25505948 | MS.gene006771:CDS |
CCATGAACCAATATACCCTG+TGG | 0.749348 | 4.1:-25498898 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 25498813 | 25506444 | 25498813 | ID=MS.gene006771 |
chr4.1 | mRNA | 25498813 | 25506444 | 25498813 | ID=MS.gene006771.t1;Parent=MS.gene006771 |
chr4.1 | exon | 25498813 | 25498978 | 25498813 | ID=MS.gene006771.t1.exon1;Parent=MS.gene006771.t1 |
chr4.1 | CDS | 25498813 | 25498978 | 25498813 | ID=cds.MS.gene006771.t1;Parent=MS.gene006771.t1 |
chr4.1 | exon | 25504617 | 25504784 | 25504617 | ID=MS.gene006771.t1.exon2;Parent=MS.gene006771.t1 |
chr4.1 | CDS | 25504617 | 25504784 | 25504617 | ID=cds.MS.gene006771.t1;Parent=MS.gene006771.t1 |
chr4.1 | exon | 25504906 | 25505123 | 25504906 | ID=MS.gene006771.t1.exon3;Parent=MS.gene006771.t1 |
chr4.1 | CDS | 25504906 | 25505123 | 25504906 | ID=cds.MS.gene006771.t1;Parent=MS.gene006771.t1 |
chr4.1 | exon | 25505212 | 25505371 | 25505212 | ID=MS.gene006771.t1.exon4;Parent=MS.gene006771.t1 |
chr4.1 | CDS | 25505212 | 25505371 | 25505212 | ID=cds.MS.gene006771.t1;Parent=MS.gene006771.t1 |
chr4.1 | exon | 25505642 | 25505852 | 25505642 | ID=MS.gene006771.t1.exon5;Parent=MS.gene006771.t1 |
chr4.1 | CDS | 25505642 | 25505852 | 25505642 | ID=cds.MS.gene006771.t1;Parent=MS.gene006771.t1 |
chr4.1 | exon | 25505945 | 25506041 | 25505945 | ID=MS.gene006771.t1.exon6;Parent=MS.gene006771.t1 |
chr4.1 | CDS | 25505945 | 25506041 | 25505945 | ID=cds.MS.gene006771.t1;Parent=MS.gene006771.t1 |
chr4.1 | exon | 25506322 | 25506444 | 25506322 | ID=MS.gene006771.t1.exon7;Parent=MS.gene006771.t1 |
chr4.1 | CDS | 25506322 | 25506444 | 25506322 | ID=cds.MS.gene006771.t1;Parent=MS.gene006771.t1 |
Gene Sequence |
Protein sequence |