Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031525.t1 | XP_013456728.1 | 96.4 | 338 | 12 | 0 | 1 | 338 | 5 | 342 | 3.50E-183 | 651 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031525.t1 | Q5XLY0 | 45.9 | 327 | 158 | 5 | 17 | 336 | 12 | 326 | 5.3e-71 | 269.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031525.t1 | A0A072ULV1 | 96.4 | 338 | 12 | 0 | 1 | 338 | 5 | 342 | 2.5e-183 | 651.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene031525 | MS.gene92812 | PPI |
MS.gene031525 | MS.gene27775 | PPI |
MS.gene031525 | MS.gene92811 | PPI |
MS.gene031525 | MS.gene27553 | PPI |
MS.gene031525 | MS.gene40154 | PPI |
MS.gene031525 | MS.gene92808 | PPI |
MS.gene031525 | MS.gene016248 | PPI |
MS.gene031525 | MS.gene27778 | PPI |
MS.gene031525 | MS.gene071398 | PPI |
MS.gene92809 | MS.gene031525 | PPI |
MS.gene031525 | MS.gene40148 | PPI |
MS.gene27551 | MS.gene031525 | PPI |
MS.gene031525 | MS.gene27554 | PPI |
MS.gene031525 | MS.gene27552 | PPI |
MS.gene031525 | MS.gene27550 | PPI |
MS.gene031525 | MS.gene27779 | PPI |
MS.gene031525 | MS.gene016249 | PPI |
MS.gene028567 | MS.gene031525 | PPI |
MS.gene92810 | MS.gene031525 | PPI |
MS.gene27776 | MS.gene031525 | PPI |
MS.gene031525 | MS.gene016245 | PPI |
MS.gene071401 | MS.gene031525 | PPI |
MS.gene031525 | MS.gene016246 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031525.t1 | MTR_4g081440 | 96.450 | 338 | 12 | 0 | 1 | 338 | 5 | 342 | 0.0 | 677 |
MS.gene031525.t1 | MTR_4g081440 | 96.154 | 338 | 12 | 1 | 1 | 338 | 1 | 337 | 0.0 | 672 |
MS.gene031525.t1 | MTR_1g022445 | 43.731 | 327 | 149 | 8 | 21 | 336 | 9 | 311 | 9.18e-89 | 271 |
MS.gene031525.t1 | MTR_1g022440 | 42.202 | 327 | 154 | 8 | 21 | 336 | 9 | 311 | 7.25e-83 | 256 |
MS.gene031525.t1 | MTR_4g092080 | 38.580 | 324 | 179 | 6 | 19 | 335 | 13 | 323 | 2.04e-70 | 224 |
MS.gene031525.t1 | MTR_7g074880 | 38.037 | 326 | 176 | 8 | 18 | 336 | 6 | 312 | 5.97e-69 | 220 |
MS.gene031525.t1 | MTR_7g074730 | 36.810 | 326 | 182 | 7 | 18 | 336 | 6 | 314 | 1.10e-66 | 214 |
MS.gene031525.t1 | MTR_7g074850 | 37.117 | 326 | 182 | 8 | 18 | 336 | 6 | 315 | 3.45e-66 | 213 |
MS.gene031525.t1 | MTR_7g074820 | 37.730 | 326 | 180 | 9 | 18 | 336 | 6 | 315 | 3.86e-64 | 208 |
MS.gene031525.t1 | MTR_8g062440 | 38.757 | 338 | 166 | 7 | 21 | 342 | 9 | 321 | 1.21e-63 | 206 |
MS.gene031525.t1 | MTR_8g062440 | 38.643 | 339 | 166 | 7 | 21 | 342 | 9 | 322 | 1.98e-63 | 206 |
MS.gene031525.t1 | MTR_7g074710 | 34.049 | 326 | 189 | 7 | 18 | 336 | 6 | 312 | 4.68e-62 | 202 |
MS.gene031525.t1 | MTR_8g062440 | 42.456 | 285 | 131 | 5 | 21 | 297 | 9 | 268 | 1.19e-61 | 201 |
MS.gene031525.t1 | MTR_8g062110 | 39.938 | 323 | 159 | 8 | 21 | 334 | 10 | 306 | 2.58e-61 | 200 |
MS.gene031525.t1 | MTR_8g062110 | 39.938 | 323 | 159 | 8 | 21 | 334 | 19 | 315 | 3.47e-61 | 200 |
MS.gene031525.t1 | MTR_8g062110 | 41.404 | 285 | 134 | 5 | 21 | 297 | 10 | 269 | 2.60e-59 | 194 |
MS.gene031525.t1 | MTR_8g062110 | 41.404 | 285 | 134 | 5 | 21 | 297 | 10 | 269 | 4.26e-59 | 194 |
MS.gene031525.t1 | MTR_4g077100 | 40.184 | 326 | 163 | 10 | 21 | 336 | 12 | 315 | 1.09e-58 | 194 |
MS.gene031525.t1 | MTR_3g005170 | 38.608 | 316 | 165 | 9 | 21 | 329 | 11 | 304 | 1.39e-58 | 193 |
MS.gene031525.t1 | MTR_2g101330 | 36.449 | 321 | 182 | 9 | 19 | 336 | 4 | 305 | 1.44e-58 | 193 |
MS.gene031525.t1 | MTR_4g023730 | 37.423 | 326 | 175 | 8 | 21 | 336 | 9 | 315 | 1.75e-58 | 193 |
MS.gene031525.t1 | MTR_4g077130 | 38.700 | 323 | 172 | 8 | 21 | 336 | 10 | 313 | 5.18e-58 | 192 |
MS.gene031525.t1 | MTR_5g056600 | 38.199 | 322 | 176 | 8 | 19 | 336 | 3 | 305 | 5.26e-58 | 192 |
MS.gene031525.t1 | MTR_4g077100 | 42.143 | 280 | 140 | 7 | 21 | 297 | 12 | 272 | 1.05e-57 | 190 |
MS.gene031525.t1 | MTR_3g005210 | 36.036 | 333 | 183 | 9 | 21 | 342 | 7 | 320 | 1.63e-57 | 191 |
MS.gene031525.t1 | MTR_3g005170 | 42.586 | 263 | 123 | 8 | 21 | 277 | 11 | 251 | 3.22e-56 | 186 |
MS.gene031525.t1 | MTR_7g074870 | 35.052 | 291 | 166 | 6 | 50 | 336 | 3 | 274 | 2.00e-52 | 176 |
MS.gene031525.t1 | MTR_5g072620 | 37.898 | 314 | 170 | 9 | 21 | 329 | 6 | 299 | 1.55e-49 | 170 |
MS.gene031525.t1 | MTR_4g009040 | 36.449 | 321 | 180 | 10 | 19 | 335 | 12 | 312 | 1.70e-49 | 170 |
MS.gene031525.t1 | MTR_4g009040 | 35.826 | 321 | 178 | 10 | 19 | 335 | 12 | 308 | 1.65e-48 | 167 |
MS.gene031525.t1 | MTR_3g031650 | 34.835 | 333 | 170 | 11 | 21 | 337 | 6 | 307 | 8.31e-45 | 157 |
MS.gene031525.t1 | MTR_3g031650 | 36.972 | 284 | 149 | 9 | 21 | 297 | 6 | 266 | 6.44e-44 | 154 |
MS.gene031525.t1 | MTR_2g104960 | 36.306 | 314 | 170 | 10 | 21 | 329 | 21 | 309 | 2.05e-43 | 154 |
MS.gene031525.t1 | MTR_4g006940 | 35.987 | 314 | 171 | 10 | 21 | 329 | 18 | 306 | 6.66e-43 | 152 |
MS.gene031525.t1 | MTR_2g013230 | 31.287 | 342 | 215 | 8 | 19 | 348 | 7 | 340 | 1.42e-42 | 152 |
MS.gene031525.t1 | MTR_4g009690 | 35.423 | 319 | 181 | 10 | 19 | 335 | 12 | 307 | 2.16e-42 | 151 |
MS.gene031525.t1 | MTR_7g117190 | 32.132 | 333 | 201 | 13 | 18 | 336 | 5 | 326 | 2.66e-41 | 149 |
MS.gene031525.t1 | MTR_4g009690 | 35.110 | 319 | 183 | 10 | 19 | 335 | 12 | 308 | 2.81e-41 | 148 |
MS.gene031525.t1 | MTR_3g005170 | 33.861 | 316 | 149 | 9 | 21 | 329 | 11 | 273 | 7.21e-41 | 146 |
MS.gene031525.t1 | MTR_2g013250 | 31.118 | 331 | 204 | 8 | 19 | 336 | 6 | 325 | 6.12e-40 | 145 |
MS.gene031525.t1 | MTR_7g117190 | 32.862 | 283 | 172 | 11 | 19 | 290 | 6 | 281 | 5.10e-39 | 142 |
MS.gene031525.t1 | MTR_4g006940 | 36.014 | 286 | 154 | 9 | 21 | 301 | 18 | 279 | 2.34e-38 | 139 |
MS.gene031525.t1 | MTR_4g006940 | 36.014 | 286 | 154 | 9 | 21 | 301 | 18 | 279 | 2.34e-38 | 139 |
MS.gene031525.t1 | MTR_2g013260 | 30.946 | 349 | 207 | 9 | 18 | 347 | 6 | 339 | 1.94e-37 | 139 |
MS.gene031525.t1 | MTR_2g028620 | 30.159 | 315 | 195 | 10 | 21 | 329 | 11 | 306 | 9.63e-34 | 128 |
MS.gene031525.t1 | MTR_2g013260 | 31.724 | 290 | 179 | 7 | 19 | 297 | 7 | 288 | 1.77e-33 | 126 |
MS.gene031525.t1 | MTR_2g028620 | 30.986 | 284 | 172 | 8 | 21 | 299 | 11 | 275 | 8.79e-32 | 122 |
MS.gene031525.t1 | MTR_8g062110 | 34.821 | 224 | 122 | 5 | 112 | 329 | 11 | 216 | 2.17e-28 | 111 |
MS.gene031525.t1 | MTR_8g062110 | 36.649 | 191 | 98 | 3 | 112 | 297 | 11 | 183 | 1.03e-26 | 105 |
MS.gene031525.t1 | MTR_0164s0070 | 31.401 | 207 | 122 | 5 | 19 | 221 | 4 | 194 | 1.02e-24 | 100 |
MS.gene031525.t1 | MTR_5g029990 | 27.532 | 316 | 192 | 14 | 21 | 330 | 13 | 297 | 2.43e-23 | 99.4 |
MS.gene031525.t1 | MTR_2g013230 | 28.689 | 244 | 164 | 6 | 114 | 348 | 8 | 250 | 3.11e-22 | 95.1 |
MS.gene031525.t1 | MTR_7g117190 | 28.440 | 218 | 141 | 8 | 130 | 336 | 3 | 216 | 1.08e-18 | 84.7 |
MS.gene031525.t1 | MTR_6g406250 | 26.119 | 268 | 166 | 9 | 21 | 279 | 56 | 300 | 2.33e-18 | 85.9 |
MS.gene031525.t1 | MTR_2g013260 | 28.346 | 254 | 158 | 7 | 110 | 347 | 23 | 268 | 1.68e-17 | 82.4 |
MS.gene031525.t1 | MTR_6g406250 | 25.571 | 219 | 144 | 6 | 21 | 232 | 56 | 262 | 4.20e-15 | 75.1 |
MS.gene031525.t1 | MTR_8g062710 | 31.667 | 120 | 70 | 3 | 1 | 116 | 1 | 112 | 1.18e-13 | 67.8 |
MS.gene031525.t1 | MTR_3g101500 | 22.939 | 279 | 181 | 10 | 19 | 294 | 3 | 250 | 9.92e-13 | 68.9 |
MS.gene031525.t1 | MTR_3g101500 | 22.939 | 279 | 181 | 10 | 19 | 294 | 3 | 250 | 1.68e-12 | 67.8 |
MS.gene031525.t1 | MTR_3g011130 | 35.345 | 116 | 71 | 2 | 115 | 229 | 30 | 142 | 2.39e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031525.t1 | AT4G27250 | 59.133 | 323 | 129 | 3 | 17 | 336 | 10 | 332 | 3.45e-135 | 390 |
MS.gene031525.t1 | AT4G27250 | 57.895 | 323 | 123 | 4 | 17 | 336 | 10 | 322 | 7.81e-129 | 374 |
MS.gene031525.t1 | AT5G42800 | 42.236 | 322 | 161 | 7 | 21 | 336 | 9 | 311 | 1.18e-82 | 257 |
MS.gene031525.t1 | AT4G35420 | 40.373 | 322 | 169 | 9 | 18 | 336 | 6 | 307 | 1.93e-68 | 219 |
MS.gene031525.t1 | AT1G09510 | 37.898 | 314 | 170 | 7 | 21 | 329 | 9 | 302 | 4.81e-64 | 207 |
MS.gene031525.t1 | AT1G61720 | 37.461 | 323 | 190 | 4 | 17 | 336 | 10 | 323 | 1.03e-62 | 204 |
MS.gene031525.t1 | AT1G51410 | 38.339 | 313 | 170 | 6 | 21 | 329 | 10 | 303 | 6.95e-60 | 197 |
MS.gene031525.t1 | AT1G09490 | 35.404 | 322 | 182 | 8 | 21 | 335 | 9 | 311 | 1.84e-59 | 196 |
MS.gene031525.t1 | AT1G66800 | 35.890 | 326 | 171 | 9 | 21 | 335 | 9 | 307 | 6.11e-59 | 194 |
MS.gene031525.t1 | AT5G19440 | 38.050 | 318 | 164 | 8 | 21 | 329 | 11 | 304 | 7.99e-59 | 194 |
MS.gene031525.t1 | AT1G09480 | 34.824 | 313 | 181 | 7 | 21 | 329 | 9 | 302 | 1.47e-55 | 186 |
MS.gene031525.t1 | AT1G09500 | 34.810 | 316 | 175 | 7 | 21 | 327 | 9 | 302 | 1.54e-55 | 186 |
MS.gene031525.t1 | AT1G09500 | 36.364 | 286 | 153 | 6 | 21 | 299 | 9 | 272 | 1.72e-55 | 184 |
MS.gene031525.t1 | AT1G09480 | 34.824 | 313 | 181 | 7 | 21 | 329 | 56 | 349 | 2.57e-55 | 186 |
MS.gene031525.t1 | AT2G45400 | 36.364 | 330 | 184 | 7 | 17 | 336 | 37 | 350 | 3.15e-55 | 186 |
MS.gene031525.t1 | AT5G58490 | 38.941 | 321 | 170 | 11 | 21 | 336 | 10 | 309 | 1.73e-51 | 175 |
MS.gene031525.t1 | AT1G68540 | 35.168 | 327 | 183 | 10 | 18 | 336 | 2 | 307 | 3.61e-51 | 174 |
MS.gene031525.t1 | AT2G33590 | 36.308 | 325 | 180 | 11 | 15 | 335 | 4 | 305 | 6.82e-51 | 173 |
MS.gene031525.t1 | AT2G45400 | 35.640 | 289 | 163 | 5 | 17 | 297 | 37 | 310 | 1.39e-49 | 170 |
MS.gene031525.t1 | AT2G33600 | 37.082 | 329 | 174 | 11 | 14 | 335 | 3 | 305 | 3.09e-47 | 164 |
MS.gene031525.t1 | AT2G02400 | 33.544 | 316 | 179 | 9 | 21 | 329 | 7 | 298 | 4.27e-46 | 160 |
MS.gene031525.t1 | AT1G25460 | 35.604 | 323 | 185 | 9 | 18 | 336 | 2 | 305 | 5.82e-46 | 160 |
MS.gene031525.t1 | AT1G09490 | 31.250 | 288 | 178 | 6 | 43 | 329 | 3 | 271 | 1.18e-44 | 156 |
MS.gene031525.t1 | AT2G45400 | 34.564 | 298 | 174 | 6 | 44 | 336 | 12 | 293 | 4.82e-43 | 152 |
MS.gene031525.t1 | AT1G15950 | 33.439 | 314 | 179 | 9 | 21 | 329 | 14 | 302 | 1.58e-42 | 152 |
MS.gene031525.t1 | AT1G76470 | 33.127 | 323 | 194 | 7 | 19 | 337 | 6 | 310 | 1.60e-42 | 151 |
MS.gene031525.t1 | AT1G15950 | 33.439 | 314 | 179 | 9 | 21 | 329 | 14 | 302 | 2.00e-42 | 152 |
MS.gene031525.t1 | AT1G15950 | 33.439 | 314 | 179 | 9 | 21 | 329 | 14 | 302 | 2.00e-42 | 152 |
MS.gene031525.t1 | AT1G80820 | 34.286 | 315 | 177 | 10 | 21 | 330 | 9 | 298 | 2.80e-41 | 148 |
MS.gene031525.t1 | AT1G09500 | 31.449 | 283 | 166 | 6 | 50 | 326 | 7 | 267 | 8.45e-40 | 143 |
MS.gene031525.t1 | AT1G15950 | 33.904 | 292 | 164 | 8 | 21 | 307 | 14 | 281 | 1.16e-39 | 143 |
MS.gene031525.t1 | AT1G15950 | 34.266 | 286 | 159 | 8 | 21 | 301 | 14 | 275 | 2.89e-39 | 141 |
MS.gene031525.t1 | AT1G15950 | 34.266 | 286 | 159 | 8 | 21 | 301 | 14 | 275 | 3.13e-39 | 141 |
MS.gene031525.t1 | AT2G45400 | 37.611 | 226 | 125 | 4 | 17 | 234 | 37 | 254 | 6.91e-38 | 137 |
MS.gene031525.t1 | AT1G80820 | 34.615 | 286 | 158 | 9 | 21 | 301 | 9 | 270 | 1.28e-36 | 134 |
MS.gene031525.t1 | AT2G23910 | 27.547 | 265 | 164 | 7 | 21 | 282 | 11 | 250 | 3.18e-26 | 106 |
MS.gene031525.t1 | AT2G23910 | 27.547 | 265 | 164 | 7 | 21 | 282 | 11 | 250 | 3.70e-26 | 106 |
MS.gene031525.t1 | AT2G23910 | 27.547 | 265 | 164 | 7 | 21 | 282 | 11 | 250 | 5.20e-26 | 106 |
MS.gene031525.t1 | AT4G30470 | 28.253 | 269 | 164 | 8 | 17 | 282 | 7 | 249 | 1.60e-23 | 99.8 |
MS.gene031525.t1 | AT1G68540 | 30.233 | 215 | 130 | 6 | 127 | 336 | 1 | 200 | 3.84e-20 | 88.6 |
MS.gene031525.t1 | AT1G15950 | 30.275 | 218 | 135 | 7 | 115 | 329 | 1 | 204 | 4.12e-18 | 83.6 |
MS.gene031525.t1 | AT2G23910 | 26.606 | 218 | 135 | 6 | 65 | 282 | 24 | 216 | 6.13e-17 | 80.5 |
MS.gene031525.t1 | AT4G33360 | 22.581 | 279 | 182 | 9 | 19 | 294 | 14 | 261 | 1.38e-16 | 80.1 |
MS.gene031525.t1 | AT4G33360 | 22.581 | 279 | 182 | 9 | 19 | 294 | 2 | 249 | 1.89e-16 | 80.1 |
MS.gene031525.t1 | AT5G14700 | 26.937 | 271 | 165 | 10 | 21 | 279 | 56 | 305 | 3.41e-15 | 76.6 |
MS.gene031525.t1 | AT5G14700 | 25.792 | 221 | 146 | 7 | 21 | 232 | 56 | 267 | 2.22e-11 | 64.7 |
Find 82 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTAAATTTGCTAAAGATAA+TGG | 0.183537 | 4.2:+28102861 | MS.gene031525:CDS |
GCAAGATTTGAGCAGGTTTA+TGG | 0.190488 | 4.2:-28102561 | None:intergenic |
CAATGCACACATATTCTTAA+TGG | 0.229405 | 4.2:+28103334 | MS.gene031525:CDS |
ACACAGTGTCAGTTTGTATT+TGG | 0.230014 | 4.2:-28102688 | None:intergenic |
ATGCCTGGACTCCACATCTT+TGG | 0.242242 | 4.2:+28103981 | MS.gene031525:CDS |
GGCACCTGTAACACAATATT+TGG | 0.281952 | 4.2:-28097648 | None:intergenic |
TTTATGGTTCCTTTGATTGC+AGG | 0.296003 | 4.2:-28102545 | None:intergenic |
GTACGCTCCTTCTCCAAGTT+GGG | 0.300401 | 4.2:+28104006 | MS.gene031525:CDS |
ACTGCCAAATATTGTGTTAC+AGG | 0.302149 | 4.2:+28097644 | MS.gene031525:CDS |
CTCAAAGAAACTAAAAGATC+TGG | 0.318600 | 4.2:+28103597 | MS.gene031525:CDS |
TTAAATTTGCTAAAGATAAT+GGG | 0.324810 | 4.2:+28102862 | MS.gene031525:CDS |
ACAGGTGCCACAGGGTATAT+TGG | 0.354757 | 4.2:+28097662 | MS.gene031525:CDS |
AGTTGGATTAGAATACTCTT+TGG | 0.355460 | 4.2:-28103432 | None:intergenic |
TGAAATCCAATTCTGTGAAA+AGG | 0.362071 | 4.2:+28102585 | MS.gene031525:CDS |
TGATCTTCGCGCCTCATGCC+TGG | 0.362792 | 4.2:+28103966 | MS.gene031525:CDS |
TGCCTGGACTCCACATCTTT+GGG | 0.371118 | 4.2:+28103982 | MS.gene031525:CDS |
CCACAGGGTATATTGGTTCA+TGG | 0.374216 | 4.2:+28097669 | MS.gene031525:CDS |
AGCTTCGATGAGGCAGTAAA+AGG | 0.376180 | 4.2:+28102309 | MS.gene031525:CDS |
GTTATAACAAGCACTGTTGC+AGG | 0.378815 | 4.2:+28102900 | MS.gene031525:CDS |
TGGCAAGATTCATCAACAAT+AGG | 0.382737 | 4.2:-28102668 | None:intergenic |
TTTGATGTACTATTTCTTCA+AGG | 0.382990 | 4.2:-28103639 | None:intergenic |
CGTACGCTCCTTCTCCAAGT+TGG | 0.395103 | 4.2:+28104005 | MS.gene031525:CDS |
CGCGCTGATTTGCACGAAGA+AGG | 0.398678 | 4.2:+28102285 | MS.gene031525:CDS |
TAATGGGATTGATCTTGTTT+CGG | 0.400774 | 4.2:+28102878 | MS.gene031525:CDS |
GAGTGTTACCTTAGCGTAGT+TGG | 0.408387 | 4.2:-28103449 | None:intergenic |
GTTATGCTGTCCTCACTAAC+AGG | 0.413744 | 4.2:+28102960 | MS.gene031525:CDS |
GAAATCCAATTCTGTGAAAA+GGG | 0.430378 | 4.2:+28102586 | MS.gene031525:CDS |
TCTGCTGTAAATGCACGAAT+GGG | 0.461394 | 4.2:+28103278 | MS.gene031525:CDS |
CATGCTACTGTCAGAGATCC+TGG | 0.464239 | 4.2:+28097728 | MS.gene031525:CDS |
AGCATAACTTTAACACTTGA+AGG | 0.476396 | 4.2:-28102945 | None:intergenic |
AAGCTGTACACTGTCTAACT+TGG | 0.483131 | 4.2:+28103397 | MS.gene031525:CDS |
TTATGGTTCCTTTGATTGCA+GGG | 0.488008 | 4.2:-28102544 | None:intergenic |
CCATTACTTACCCATCCACT+TGG | 0.492651 | 4.2:-28102722 | None:intergenic |
ATCTGCTGTAAATGCACGAA+TGG | 0.493103 | 4.2:+28103277 | MS.gene031525:CDS |
TCAAAGAAACTAAAAGATCT+GGG | 0.495370 | 4.2:+28103598 | MS.gene031525:CDS |
ATTTCAAGCAAGATTTGAGC+AGG | 0.496756 | 4.2:-28102568 | None:intergenic |
CTCTGATGTTAAAATAAGAC+AGG | 0.500347 | 4.2:+28104048 | MS.gene031525:CDS |
TACGCTCCTTCTCCAAGTTG+GGG | 0.501880 | 4.2:+28104007 | MS.gene031525:CDS |
CGCCCAAAGATGTGGAGTCC+AGG | 0.504394 | 4.2:-28103984 | None:intergenic |
ACACCTCCTGTCATTGTGGA+AGG | 0.512956 | 4.2:+28102239 | MS.gene031525:CDS |
TATTGTGTTACAGGTGCCAC+AGG | 0.519643 | 4.2:+28097653 | MS.gene031525:CDS |
CTAAAGATAGCAATGGAAAG+TGG | 0.532380 | 4.2:+28102642 | MS.gene031525:CDS |
CACCACCCTTCCACAATGAC+AGG | 0.541255 | 4.2:-28102245 | None:intergenic |
GTTGAAGCTCTTCTTCAAAG+AGG | 0.555164 | 4.2:+28097695 | MS.gene031525:CDS |
GGAATACACAACCAAGTGGA+TGG | 0.556204 | 4.2:+28102711 | MS.gene031525:CDS |
ATCTCTGACAGTAGCATGAA+CGG | 0.558337 | 4.2:-28097723 | None:intergenic |
ATAATTGACCCTGCAATCAA+AGG | 0.559331 | 4.2:+28102536 | MS.gene031525:CDS |
AATGGAGGAAGCAATGAGGA+TGG | 0.563316 | 4.2:+28097595 | None:intergenic |
ATTACTGCTAAAGATAGCAA+TGG | 0.565154 | 4.2:+28102635 | MS.gene031525:CDS |
CGTTACACCTCCTGTCATTG+TGG | 0.567359 | 4.2:+28102235 | MS.gene031525:CDS |
ATGGAACATGCTAAAGCAGA+AGG | 0.567942 | 4.2:+28103353 | MS.gene031525:CDS |
GGAGCGTACGCCCAAAGATG+TGG | 0.569024 | 4.2:-28103992 | None:intergenic |
CACCTCCTGTCATTGTGGAA+GGG | 0.580068 | 4.2:+28102240 | MS.gene031525:CDS |
TTCTTTGAGGAAATTTCAGT+AGG | 0.582662 | 4.2:-28103583 | None:intergenic |
ATTCTAATCCAACTACGCTA+AGG | 0.591677 | 4.2:+28103441 | MS.gene031525:CDS |
GAACACATGAGGTGGATCAC+CGG | 0.592249 | 4.2:+28103932 | MS.gene031525:CDS |
ATGAGGTGGATCACCGGAGT+TGG | 0.596042 | 4.2:+28103938 | MS.gene031525:CDS |
CGCTCCTTCTCCAAGTTGGG+GGG | 0.597867 | 4.2:+28104009 | MS.gene031525:CDS |
GTAACACAATATTTGGCAGT+AGG | 0.604825 | 4.2:-28097641 | None:intergenic |
TATAAAGTCACCTGTTAGTG+AGG | 0.610455 | 4.2:-28102970 | None:intergenic |
ACGCTCCTTCTCCAAGTTGG+GGG | 0.611997 | 4.2:+28104008 | MS.gene031525:CDS |
GAAGATCACATCACCAACTC+CGG | 0.612539 | 4.2:-28103951 | None:intergenic |
AAGAAATGGAGGAAGCAATG+AGG | 0.616615 | 4.2:+28097591 | None:intergenic |
GAATACACAACCAAGTGGAT+GGG | 0.623474 | 4.2:+28102712 | MS.gene031525:CDS |
AGATGTGGAGTCCAGGCATG+AGG | 0.624712 | 4.2:-28103977 | None:intergenic |
TCCTGTAGGAACACATGAGG+TGG | 0.627352 | 4.2:+28103924 | MS.gene031525:intron |
ATTAATGAGAAAGAAAACAT+TGG | 0.630403 | 4.2:+28102375 | MS.gene031525:CDS |
ATTGCATTGAAGCTGCAACA+TGG | 0.647004 | 4.2:-28102347 | None:intergenic |
CTCCTGTCATTGTGGAAGGG+TGG | 0.654676 | 4.2:+28102243 | MS.gene031525:CDS |
GAGGCAGTAAAAGGATGTGA+TGG | 0.658885 | 4.2:+28102318 | MS.gene031525:CDS |
CGAAGAAGGAAGCTTCGATG+AGG | 0.670075 | 4.2:+28102299 | MS.gene031525:CDS |
CACCCTTCCACAATGACAGG+AGG | 0.673181 | 4.2:-28102242 | None:intergenic |
AACATGCTAAAGCAGAAGGT+AGG | 0.675020 | 4.2:+28103357 | MS.gene031525:CDS |
AAATACAAACTGACACTGTG+TGG | 0.677088 | 4.2:+28102690 | MS.gene031525:CDS |
CTGCTGTAAATGCACGAATG+GGG | 0.681829 | 4.2:+28103279 | MS.gene031525:CDS |
TGTTCCTGTAGGAACACATG+AGG | 0.689751 | 4.2:+28103921 | MS.gene031525:intron |
GTGTGGAATACACAACCAAG+TGG | 0.719552 | 4.2:+28102707 | MS.gene031525:CDS |
CTTCTTCGTGCAAATCAGCG+CGG | 0.720406 | 4.2:-28102284 | None:intergenic |
ATTGTGTTACAGGTGCCACA+GGG | 0.721235 | 4.2:+28097654 | MS.gene031525:CDS |
GAAGAGTCAGAAATATGACA+AGG | 0.727881 | 4.2:+28103558 | MS.gene031525:CDS |
TCTGATGTTAAAATAAGACA+GGG | 0.734578 | 4.2:+28104049 | MS.gene031525:CDS |
CCATGAACCAATATACCCTG+TGG | 0.749348 | 4.2:-28097669 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGATATAAGTAATAAAAATA+TGG | + | chr4.2:28098573-28098592 | MS.gene031525:intron | 10.0% |
!! | ATAAATTAATTTATTTATCG+AGG | - | chr4.2:28102010-28102029 | None:intergenic | 10.0% |
!! | GAAATAATATTAAAATATGA+TGG | + | chr4.2:28101288-28101307 | MS.gene031525:intron | 10.0% |
!! | TTAAAAAATTTAAGAGTTTA+AGG | - | chr4.2:28098442-28098461 | None:intergenic | 10.0% |
!! | TTAAAATGTTTAAATTAACT+TGG | + | chr4.2:28100352-28100371 | MS.gene031525:intron | 10.0% |
!! | TTATGATAAAATATAATCAA+CGG | + | chr4.2:28098095-28098114 | MS.gene031525:intron | 10.0% |
!!! | ATAAGTAATTTTTTTTTTGT+AGG | - | chr4.2:28098381-28098400 | None:intergenic | 10.0% |
!!! | ATATAATTTCTCTTTAAAAT+TGG | + | chr4.2:28100107-28100126 | MS.gene031525:intron | 10.0% |
!!! | CTTAATTTGTATTAATTTTA+GGG | + | chr4.2:28098277-28098296 | MS.gene031525:intron | 10.0% |
!!! | TAAGTAATTTTTTTTTTGTA+GGG | - | chr4.2:28098380-28098399 | None:intergenic | 10.0% |
!!! | TAGTGTTATTTTTTTTAAAA+AGG | + | chr4.2:28098982-28099001 | MS.gene031525:intron | 10.0% |
!!! | TCTTAATTTGTATTAATTTT+AGG | + | chr4.2:28098276-28098295 | MS.gene031525:intron | 10.0% |
!! | AAGCATAAATTAAACAAATT+TGG | + | chr4.2:28098692-28098711 | MS.gene031525:intron | 15.0% |
!! | AATGCTATTAAAATTAAGTA+AGG | + | chr4.2:28098764-28098783 | MS.gene031525:intron | 15.0% |
!! | AATGCTATTAAAATTAAGTA+AGG | - | chr4.2:28098783-28098764 | None:intergenic | 15.0% |
!! | ATATGTATATTAAATTCTTC+AGG | + | chr4.2:28103485-28103504 | MS.gene031525:intron | 15.0% |
!! | TAAAACTAAATGATTAGAAA+AGG | - | chr4.2:28099338-28099357 | None:intergenic | 15.0% |
!! | TATAAAATGTTGTTAAATAG+TGG | + | chr4.2:28103018-28103037 | MS.gene031525:intron | 15.0% |
!! | TATGTATATTAAATTCTTCA+GGG | + | chr4.2:28103486-28103505 | MS.gene031525:intron | 15.0% |
!! | TGATATTTGAACAATTATTT+CGG | + | chr4.2:28099991-28100010 | MS.gene031525:intron | 15.0% |
!! | TGTTTATTTAATTGATCAAT+AGG | + | chr4.2:28097864-28097883 | MS.gene031525:intron | 15.0% |
!! | TTCCTTAAAAATAAATAAGT+TGG | + | chr4.2:28099237-28099256 | MS.gene031525:intron | 15.0% |
!!! | AAAAACAAGTTTGTTTTATT+TGG | + | chr4.2:28100848-28100867 | MS.gene031525:intron | 15.0% |
!!! | AAACAAAATTTATTTTAGCA+GGG | - | chr4.2:28098413-28098432 | None:intergenic | 15.0% |
!!! | AACAAATAATTTAGTTTGTT+TGG | - | chr4.2:28098058-28098077 | None:intergenic | 15.0% |
!!! | AATTTTTGCGATATTTTTTT+CGG | + | chr4.2:28098608-28098627 | MS.gene031525:intron | 15.0% |
!!! | ACAAATTAAGACTTTTTTTA+GGG | - | chr4.2:28098267-28098286 | None:intergenic | 15.0% |
!!! | ATAAACGTTTTTTAATGTAT+AGG | + | chr4.2:28103195-28103214 | MS.gene031525:intron | 15.0% |
!!! | GTTAATTTAAACATTTTAAG+AGG | - | chr4.2:28100351-28100370 | None:intergenic | 15.0% |
!!! | TAAACAAAATTTATTTTAGC+AGG | - | chr4.2:28098414-28098433 | None:intergenic | 15.0% |
!!! | TACAAATTAAGACTTTTTTT+AGG | - | chr4.2:28098268-28098287 | None:intergenic | 15.0% |
!!! | TACCAACTTATTTATTTTTA+AGG | - | chr4.2:28099242-28099261 | None:intergenic | 15.0% |
!!! | TATTTAGTTTCATCTTAAAA+TGG | - | chr4.2:28100149-28100168 | None:intergenic | 15.0% |
!!! | TTAAATTTGCTAAAGATAAT+GGG | + | chr4.2:28102862-28102881 | MS.gene031525:CDS | 15.0% |
!!! | TTTAAATTTGCTAAAGATAA+TGG | + | chr4.2:28102861-28102880 | MS.gene031525:CDS | 15.0% |
!!! | TTTTAAAGGATTTTTCTTTT+AGG | - | chr4.2:28100299-28100318 | None:intergenic | 15.0% |
!! | AAGAAAAAAAGAGATTGAAT+GGG | - | chr4.2:28097762-28097781 | None:intergenic | 20.0% |
!! | AATTGATTATGTATGCATAT+AGG | + | chr4.2:28103230-28103249 | MS.gene031525:intron | 20.0% |
!! | AGAAAAAGAAAGAAAAAAAG+TGG | + | chr4.2:28098898-28098917 | MS.gene031525:intron | 20.0% |
!! | AGGTAACTGAAATTTATTTA+AGG | - | chr4.2:28101990-28102009 | None:intergenic | 20.0% |
!! | AGTTGAGCATAAATAATAAA+TGG | + | chr4.2:28099923-28099942 | MS.gene031525:intron | 20.0% |
!! | ATATGCATACATAATCAATT+TGG | - | chr4.2:28103230-28103249 | None:intergenic | 20.0% |
!! | ATTAATGAGAAAGAAAACAT+TGG | + | chr4.2:28102375-28102394 | MS.gene031525:CDS | 20.0% |
!! | CTAAACAAATTCAACTAAAT+TGG | - | chr4.2:28101453-28101472 | None:intergenic | 20.0% |
!! | CTATCTATCTATATTATGAA+TGG | + | chr4.2:28099272-28099291 | MS.gene031525:intron | 20.0% |
!! | GGTAACTGAAATTTATTTAA+GGG | - | chr4.2:28101989-28102008 | None:intergenic | 20.0% |
!! | GTTAAAACCATTGAAATTAA+GGG | - | chr4.2:28098838-28098857 | None:intergenic | 20.0% |
!! | TAAAGTATGAAATTAGTCAA+CGG | + | chr4.2:28098201-28098220 | MS.gene031525:intron | 20.0% |
!! | TAAGAAAAAAAGAGATTGAA+TGG | - | chr4.2:28097763-28097782 | None:intergenic | 20.0% |
!! | TAATTAACCCTTAATTTCAA+TGG | + | chr4.2:28098828-28098847 | MS.gene031525:intron | 20.0% |
!! | TCAAATGTAATGGTAAAAAA+TGG | + | chr4.2:28102113-28102132 | MS.gene031525:intron | 20.0% |
!! | TGATTTCATTTGAACTTAAT+TGG | + | chr4.2:28097841-28097860 | MS.gene031525:intron | 20.0% |
!! | TGTTAAAACCATTGAAATTA+AGG | - | chr4.2:28098839-28098858 | None:intergenic | 20.0% |
!! | TTCGAATCAATTAAAATAGT+CGG | + | chr4.2:28100776-28100795 | MS.gene031525:intron | 20.0% |
!! | TTTAAATATTGTTTGTGCAT+TGG | + | chr4.2:28102448-28102467 | MS.gene031525:intron | 20.0% |
!!! | AAAATTTATATGACTGACTT+TGG | - | chr4.2:28100636-28100655 | None:intergenic | 20.0% |
!!! | AAAGATTATTTCTTATGTGT+CGG | - | chr4.2:28101232-28101251 | None:intergenic | 20.0% |
!!! | ATATTTTACTCTTCTAGTTA+GGG | - | chr4.2:28101523-28101542 | None:intergenic | 20.0% |
!!! | ATATTTTGATCGATTTGTAT+GGG | - | chr4.2:28099595-28099614 | None:intergenic | 20.0% |
!!! | ATTTTTTTCTTCATATGCAT+CGG | - | chr4.2:28101950-28101969 | None:intergenic | 20.0% |
!!! | GTTTTTCAACAATTTTTTAC+AGG | - | chr4.2:28098662-28098681 | None:intergenic | 20.0% |
!!! | TCATTTTTTTCATGTAAAGT+CGG | + | chr4.2:28103855-28103874 | MS.gene031525:intron | 20.0% |
!!! | TGGAAGCATATAAATTTTTT+TGG | + | chr4.2:28099423-28099442 | MS.gene031525:intron | 20.0% |
!!! | TTAAGGGTTAATTATGTTTT+TGG | - | chr4.2:28098822-28098841 | None:intergenic | 20.0% |
!!! | TTGAATTTGTTTAGATCTTT+GGG | + | chr4.2:28101459-28101478 | MS.gene031525:intron | 20.0% |
!!! | TTTAGGGTTAATTATGTTTT+TGG | + | chr4.2:28098293-28098312 | MS.gene031525:intron | 20.0% |
!!! | TTTCTTGAGTTTTTCTTTTT+TGG | + | chr4.2:28102793-28102812 | MS.gene031525:intron | 20.0% |
!!! | TTTCTTTTAGGTTAATTCTT+TGG | - | chr4.2:28100287-28100306 | None:intergenic | 20.0% |
!!! | TTTGTTTTATTTGGTTCAAT+CGG | + | chr4.2:28100857-28100876 | MS.gene031525:intron | 20.0% |
!!! | TTTTTTACCATTACATTTGA+CGG | - | chr4.2:28102113-28102132 | None:intergenic | 20.0% |
! | AAAAATATGATGGTTTGATC+AGG | + | chr4.2:28101341-28101360 | MS.gene031525:intron | 25.0% |
! | AAACAAATTTGGATTGAGTA+AGG | + | chr4.2:28098703-28098722 | MS.gene031525:intron | 25.0% |
! | AAACCCGAATTTATAAAAGT+CGG | + | chr4.2:28101382-28101401 | MS.gene031525:intron | 25.0% |
! | AAATACTAAAATACTCCTAG+CGG | - | chr4.2:28101731-28101750 | None:intergenic | 25.0% |
! | AAGAGATTATTAGTAAGCAT+TGG | - | chr4.2:28102169-28102188 | None:intergenic | 25.0% |
! | AAGGTAAATAACCATAATCT+AGG | - | chr4.2:28103678-28103697 | None:intergenic | 25.0% |
! | ACTGAAATTTATTTAAGGGT+TGG | - | chr4.2:28101985-28102004 | None:intergenic | 25.0% |
! | AGAAAAAAAGAGATTGAATG+GGG | - | chr4.2:28097761-28097780 | None:intergenic | 25.0% |
! | AGAGAATAAGAACATAATGT+GGG | + | chr4.2:28100036-28100055 | MS.gene031525:intron | 25.0% |
! | ATCAATTAAAATAGTCGGTT+TGG | + | chr4.2:28100781-28100800 | MS.gene031525:intron | 25.0% |
! | ATCATTGATATCCTAAAATG+TGG | + | chr4.2:28099403-28099422 | MS.gene031525:intron | 25.0% |
! | ATGAAATTGTATGATCAACA+AGG | + | chr4.2:28101862-28101881 | MS.gene031525:intron | 25.0% |
! | GGTTTGTAAAATTAGATACT+AGG | + | chr4.2:28097885-28097904 | MS.gene031525:intron | 25.0% |
! | GTCAGACTTTACTTATTTAT+TGG | + | chr4.2:28100251-28100270 | MS.gene031525:intron | 25.0% |
! | GTCTAAAAGTTGTACTAAAA+TGG | + | chr4.2:28100076-28100095 | MS.gene031525:intron | 25.0% |
! | GTGTTAAGAACGTTATTAAA+AGG | - | chr4.2:28098638-28098657 | None:intergenic | 25.0% |
! | TCAAAGAAACTAAAAGATCT+GGG | + | chr4.2:28103598-28103617 | MS.gene031525:CDS | 25.0% |
! | TCAAATTCAAATTGTCTCTA+TGG | - | chr4.2:28099967-28099986 | None:intergenic | 25.0% |
! | TCTGATGTTAAAATAAGACA+GGG | + | chr4.2:28104049-28104068 | MS.gene031525:CDS | 25.0% |
! | TGTTGTTGGATATTTATGTT+TGG | - | chr4.2:28100573-28100592 | None:intergenic | 25.0% |
!! | AAACCCGACTTTTATAAATT+CGG | - | chr4.2:28101389-28101408 | None:intergenic | 25.0% |
!! | GTTGAATTTGTTTAGATCTT+TGG | + | chr4.2:28101458-28101477 | MS.gene031525:intron | 25.0% |
!! | TTTATATGCTTCCACATTTT+AGG | - | chr4.2:28099417-28099436 | None:intergenic | 25.0% |
!! | TTTGATGTACTATTTCTTCA+AGG | - | chr4.2:28103642-28103661 | None:intergenic | 25.0% |
!!! | AGTTTTTCTTTTTTGGTGAT+AGG | + | chr4.2:28102800-28102819 | MS.gene031525:intron | 25.0% |
!!! | ATCTCTTTTTTTCTTAGTAC+AGG | + | chr4.2:28097767-28097786 | MS.gene031525:intron | 25.0% |
!!! | CAAACTTGTTTTTCATTGTT+TGG | - | chr4.2:28100841-28100860 | None:intergenic | 25.0% |
!!! | CTACATTCAATTTTGATGAA+GGG | + | chr4.2:28097928-28097947 | MS.gene031525:intron | 25.0% |
!!! | GATATTTTACTCTTCTAGTT+AGG | - | chr4.2:28101524-28101543 | None:intergenic | 25.0% |
!!! | GATATTTTGATCGATTTGTA+TGG | - | chr4.2:28099596-28099615 | None:intergenic | 25.0% |
!!! | TACATTCAATTTTGATGAAG+GGG | + | chr4.2:28097929-28097948 | MS.gene031525:intron | 25.0% |
!!! | TAGTTTTAGCAAAGCATTTA+TGG | + | chr4.2:28099350-28099369 | MS.gene031525:intron | 25.0% |
!!! | TATTTTACTCTTCTAGTTAG+GGG | - | chr4.2:28101522-28101541 | None:intergenic | 25.0% |
!!! | TCTCTTTTTTTCTTAGTACA+GGG | + | chr4.2:28097768-28097787 | MS.gene031525:intron | 25.0% |
!!! | TCTTCAAACGTTTTTTCTTT+TGG | - | chr4.2:28100198-28100217 | None:intergenic | 25.0% |
AACAATGCGCAACAAAAATT+TGG | - | chr4.2:28103905-28103924 | None:intergenic | 30.0% | |
AACCCGAATTTATAAAAGTC+GGG | + | chr4.2:28101383-28101402 | MS.gene031525:intron | 30.0% | |
AAGAAAAAAAGTGGCGTAAT+TGG | + | chr4.2:28098907-28098926 | MS.gene031525:intron | 30.0% | |
AAGTAAGGACTAAACTTACA+AGG | + | chr4.2:28098779-28098798 | MS.gene031525:intron | 30.0% | |
AAGTAAGGACTAAACTTACA+AGG | - | chr4.2:28098798-28098779 | None:intergenic | 30.0% | |
AATTGTATGATCAACAAGGT+CGG | + | chr4.2:28101866-28101885 | MS.gene031525:intron | 30.0% | |
ACAATGCGCAACAAAAATTT+GGG | - | chr4.2:28103904-28103923 | None:intergenic | 30.0% | |
ACAATTTGATGCACAAGATA+TGG | + | chr4.2:28097978-28097997 | MS.gene031525:intron | 30.0% | |
AGCATAACTTTAACACTTGA+AGG | - | chr4.2:28102948-28102967 | None:intergenic | 30.0% | |
ATCATTTCACGATATCTGTT+TGG | + | chr4.2:28101169-28101188 | MS.gene031525:intron | 30.0% | |
ATGAAACTCTATGATTGATC+AGG | + | chr4.2:28102075-28102094 | MS.gene031525:intron | 30.0% | |
ATGTGTTTGTAATGAAAGCT+AGG | + | chr4.2:28103150-28103169 | MS.gene031525:intron | 30.0% | |
ATTACTGCTAAAGATAGCAA+TGG | + | chr4.2:28102635-28102654 | MS.gene031525:CDS | 30.0% | |
ATTATGTGTTGCCTAGATTA+TGG | + | chr4.2:28103664-28103683 | MS.gene031525:intron | 30.0% | |
CAATGCACACATATTCTTAA+TGG | + | chr4.2:28103334-28103353 | MS.gene031525:CDS | 30.0% | |
CCTTAAGACACAAGTTTAAA+AGG | - | chr4.2:28099202-28099221 | None:intergenic | 30.0% | |
CCTTCATCAAAATTGAATGT+AGG | - | chr4.2:28097930-28097949 | None:intergenic | 30.0% | |
CTCAAAGAAACTAAAAGATC+TGG | + | chr4.2:28103597-28103616 | MS.gene031525:CDS | 30.0% | |
CTCTGATGTTAAAATAAGAC+AGG | + | chr4.2:28104048-28104067 | MS.gene031525:CDS | 30.0% | |
GAAATCCAATTCTGTGAAAA+GGG | + | chr4.2:28102586-28102605 | MS.gene031525:CDS | 30.0% | |
GAGAGAATAAGAACATAATG+TGG | + | chr4.2:28100035-28100054 | MS.gene031525:intron | 30.0% | |
GTCATATGCAAATATGTTGT+TGG | - | chr4.2:28100587-28100606 | None:intergenic | 30.0% | |
GTGTTAAGAAGAAATGAACA+AGG | - | chr4.2:28101834-28101853 | None:intergenic | 30.0% | |
TAAAAGATGAAATGATGCCA+CGG | - | chr4.2:28099525-28099544 | None:intergenic | 30.0% | |
TAAATGACTAAAAAACCCTG+CGG | + | chr4.2:28101656-28101675 | MS.gene031525:intron | 30.0% | |
TATAGTAGTACTACTACTTG+TGG | + | chr4.2:28099498-28099517 | MS.gene031525:intron | 30.0% | |
TATCGTTTATCAGTTTCACA+TGG | - | chr4.2:28100428-28100447 | None:intergenic | 30.0% | |
TCAAATTGTCTCTATGGATT+TGG | - | chr4.2:28099961-28099980 | None:intergenic | 30.0% | |
TGAAATCCAATTCTGTGAAA+AGG | + | chr4.2:28102585-28102604 | MS.gene031525:CDS | 30.0% | |
! | AACCCGACTTTTATAAATTC+GGG | - | chr4.2:28101388-28101407 | None:intergenic | 30.0% |
! | AGTTGGATTAGAATACTCTT+TGG | - | chr4.2:28103435-28103454 | None:intergenic | 30.0% |
! | ATTTGGTTTACACCTGAATA+AGG | + | chr4.2:28101414-28101433 | MS.gene031525:intron | 30.0% |
! | CAAGTTTAGAACACTATGAA+AGG | + | chr4.2:28098476-28098495 | MS.gene031525:intron | 30.0% |
! | CCTTTTAAACTTGTGTCTTA+AGG | + | chr4.2:28099199-28099218 | MS.gene031525:intron | 30.0% |
! | TAATGGGATTGATCTTGTTT+CGG | + | chr4.2:28102878-28102897 | MS.gene031525:CDS | 30.0% |
! | TTCTTTGAGGAAATTTCAGT+AGG | - | chr4.2:28103586-28103605 | None:intergenic | 30.0% |
!! | AATCATCCATGTTGGTTTAA+TGG | + | chr4.2:28100720-28100739 | MS.gene031525:intron | 30.0% |
!! | AATTATTTCGGTGCAACTTT+TGG | + | chr4.2:28100003-28100022 | MS.gene031525:intron | 30.0% |
!! | ACATTCAATTTTGATGAAGG+GGG | + | chr4.2:28097930-28097949 | MS.gene031525:intron | 30.0% |
!! | ATCATCCATGTTGGTTTAAT+GGG | + | chr4.2:28100721-28100740 | MS.gene031525:intron | 30.0% |
!! | ATTTTACTCTTCTAGTTAGG+GGG | - | chr4.2:28101521-28101540 | None:intergenic | 30.0% |
!! | CATACTTTAAAGTGTGTGTT+TGG | - | chr4.2:28098190-28098209 | None:intergenic | 30.0% |
!! | CCTACATTCAATTTTGATGA+AGG | + | chr4.2:28097927-28097946 | MS.gene031525:intron | 30.0% |
!! | TTAACTTGGCGAAAAAGTTT+TGG | + | chr4.2:28100366-28100385 | MS.gene031525:intron | 30.0% |
!!! | AAGTGGTAGATTTTTGGTAA+TGG | + | chr4.2:28101902-28101921 | MS.gene031525:intron | 30.0% |
!!! | CAGATCTTTTAGTTTCTTTG+AGG | - | chr4.2:28103599-28103618 | None:intergenic | 30.0% |
!!! | GAGTGCAGAAATTTTTTGTA+GGG | + | chr4.2:28098735-28098754 | MS.gene031525:intron | 30.0% |
!!! | TCGATTTTTTGTCCTTATTC+AGG | - | chr4.2:28101429-28101448 | None:intergenic | 30.0% |
!!! | TGAGTGCAGAAATTTTTTGT+AGG | + | chr4.2:28098734-28098753 | MS.gene031525:intron | 30.0% |
!!! | TTTTGCGATATTTTTTTCGG+AGG | + | chr4.2:28098611-28098630 | MS.gene031525:intron | 30.0% |
AAAAGATGAAATGATGCCAC+GGG | - | chr4.2:28099524-28099543 | None:intergenic | 35.0% | |
AAAATATCCCTTCCCTTGAA+TGG | + | chr4.2:28101536-28101555 | MS.gene031525:intron | 35.0% | |
AAAGTCGGGTTTGATTGATT+TGG | + | chr4.2:28101397-28101416 | MS.gene031525:intron | 35.0% | |
AAATACAAACTGACACTGTG+TGG | + | chr4.2:28102690-28102709 | MS.gene031525:CDS | 35.0% | |
AAGACTAGTAGCTAAACAGA+AGG | - | chr4.2:28103697-28103716 | None:intergenic | 35.0% | |
AATAAGGCAAAACTGCACTA+TGG | + | chr4.2:28103778-28103797 | MS.gene031525:intron | 35.0% | |
ACACAGTGTCAGTTTGTATT+TGG | - | chr4.2:28102691-28102710 | None:intergenic | 35.0% | |
ACTGCCAAATATTGTGTTAC+AGG | + | chr4.2:28097644-28097663 | MS.gene031525:CDS | 35.0% | |
ACTTTGACTCATGTACATAG+TGG | - | chr4.2:28103726-28103745 | None:intergenic | 35.0% | |
ATAAGGCAAAACTGCACTAT+GGG | + | chr4.2:28103779-28103798 | MS.gene031525:intron | 35.0% | |
ATAATTGACCCTGCAATCAA+AGG | + | chr4.2:28102536-28102555 | MS.gene031525:CDS | 35.0% | |
ATGGTCCAACAAATACCAAA+TGG | - | chr4.2:28101569-28101588 | None:intergenic | 35.0% | |
ATTCTAATCCAACTACGCTA+AGG | + | chr4.2:28103441-28103460 | MS.gene031525:CDS | 35.0% | |
ATTTCAAGCAAGATTTGAGC+AGG | - | chr4.2:28102571-28102590 | None:intergenic | 35.0% | |
CAACATGGATGATTACTGTA+AGG | - | chr4.2:28100714-28100733 | None:intergenic | 35.0% | |
CAAGCATGTATCGAAATGAA+AGG | - | chr4.2:28102139-28102158 | None:intergenic | 35.0% | |
CAATGCGCAACAAAAATTTG+GGG | - | chr4.2:28103903-28103922 | None:intergenic | 35.0% | |
CTAAAGATAGCAATGGAAAG+TGG | + | chr4.2:28102642-28102661 | MS.gene031525:CDS | 35.0% | |
CTGGCTTATAACTAGAAAAC+CGG | - | chr4.2:28101695-28101714 | None:intergenic | 35.0% | |
CTTACAGTAATCATCCATGT+TGG | + | chr4.2:28100712-28100731 | MS.gene031525:intron | 35.0% | |
CTTGTGTTTCCAAGACATAT+TGG | - | chr4.2:28101636-28101655 | None:intergenic | 35.0% | |
GAAGAGTCAGAAATATGACA+AGG | + | chr4.2:28103558-28103577 | MS.gene031525:CDS | 35.0% | |
GCAGCAGAATTTGAACAAAT+TGG | + | chr4.2:28102995-28103014 | MS.gene031525:intron | 35.0% | |
GGTACATTAGCAGTGAAAAA+CGG | - | chr4.2:28102927-28102946 | None:intergenic | 35.0% | |
GTAACACAATATTTGGCAGT+AGG | - | chr4.2:28097644-28097663 | None:intergenic | 35.0% | |
GTACATTAGCAGTGAAAAAC+GGG | - | chr4.2:28102926-28102945 | None:intergenic | 35.0% | |
GTGATTTCCGTCAAATGTAA+TGG | + | chr4.2:28102103-28102122 | MS.gene031525:intron | 35.0% | |
TACGTGAGTTAACTTACGTT+CGG | + | chr4.2:28099619-28099638 | MS.gene031525:intron | 35.0% | |
TAGTACAGGGAGAAAGAATT+AGG | + | chr4.2:28097781-28097800 | MS.gene031525:intron | 35.0% | |
TATAAAGTCACCTGTTAGTG+AGG | - | chr4.2:28102973-28102992 | None:intergenic | 35.0% | |
TGAACAATGCTAGTAGTAGT+AGG | - | chr4.2:28102757-28102776 | None:intergenic | 35.0% | |
TGGCAAGATTCATCAACAAT+AGG | - | chr4.2:28102671-28102690 | None:intergenic | 35.0% | |
TGGTCCAACAAATACCAAAT+GGG | - | chr4.2:28101568-28101587 | None:intergenic | 35.0% | |
TGTATGAGTTAACTTACGCT+GGG | + | chr4.2:28099690-28099709 | MS.gene031525:intron | 35.0% | |
TTATGGTTCCTTTGATTGCA+GGG | - | chr4.2:28102547-28102566 | None:intergenic | 35.0% | |
TTCCTACATATATATGCAGC+AGG | + | chr4.2:28103536-28103555 | MS.gene031525:intron | 35.0% | |
TTCCTGCTGCATATATATGT+AGG | - | chr4.2:28103541-28103560 | None:intergenic | 35.0% | |
TTCTGACATCCAATATGTCT+TGG | + | chr4.2:28101624-28101643 | MS.gene031525:intron | 35.0% | |
TTTATGGTTCCTTTGATTGC+AGG | - | chr4.2:28102548-28102567 | None:intergenic | 35.0% | |
! | AACAACCCTTTTCACAGAAT+TGG | - | chr4.2:28102594-28102613 | None:intergenic | 35.0% |
! | AACGCATTGATAATCATCGA+AGG | + | chr4.2:28102404-28102423 | MS.gene031525:intron | 35.0% |
! | CAACACAAGTGGTAGATTTT+TGG | + | chr4.2:28101896-28101915 | MS.gene031525:intron | 35.0% |
! | GTTTAGATCTTTGGGTTCAT+CGG | + | chr4.2:28101467-28101486 | MS.gene031525:intron | 35.0% |
! | TACAAGGTCGCAATTTTGTA+GGG | + | chr4.2:28098795-28098814 | MS.gene031525:intron | 35.0% |
! | TACAAGGTCGCAATTTTGTA+GGG | - | chr4.2:28098814-28098795 | None:intergenic | 35.0% |
! | TTACAAGGTCGCAATTTTGT+AGG | + | chr4.2:28098794-28098813 | MS.gene031525:intron | 35.0% |
! | TTACAAGGTCGCAATTTTGT+AGG | - | chr4.2:28098813-28098794 | None:intergenic | 35.0% |
! | TTCATGTAAAGTCGGTCTTT+TGG | + | chr4.2:28103863-28103882 | MS.gene031525:intron | 35.0% |
!! | CATTCAATTTTGATGAAGGG+GGG | + | chr4.2:28097931-28097950 | MS.gene031525:intron | 35.0% |
!! | TTTAATGGGTTGGCTTAGTT+CGG | + | chr4.2:28100735-28100754 | MS.gene031525:intron | 35.0% |
!! | TTTTACTCTTCTAGTTAGGG+GGG | - | chr4.2:28101520-28101539 | None:intergenic | 35.0% |
!!! | GGGAGTGAATGTTTTTTGTT+GGG | - | chr4.2:28099575-28099594 | None:intergenic | 35.0% |
!!! | GTTGATGGGTTTTTAGCATA+TGG | - | chr4.2:28101588-28101607 | None:intergenic | 35.0% |
!!! | GTTTTCTAGTTATAAGCCAG+CGG | + | chr4.2:28101695-28101714 | MS.gene031525:intron | 35.0% |
!!! | TCTGTTTGGCATGTTTTGAT+TGG | + | chr4.2:28101183-28101202 | MS.gene031525:intron | 35.0% |
!!! | TGGGAGTGAATGTTTTTTGT+TGG | - | chr4.2:28099576-28099595 | None:intergenic | 35.0% |
AACATGCTAAAGCAGAAGGT+AGG | + | chr4.2:28103357-28103376 | MS.gene031525:CDS | 40.0% | |
AACGTGATATAAGTCACGCT+GGG | + | chr4.2:28099790-28099809 | MS.gene031525:intron | 40.0% | |
AAGCTGTACACTGTCTAACT+TGG | + | chr4.2:28103397-28103416 | MS.gene031525:CDS | 40.0% | |
ACGTAAGTTAACTCACGTAG+AGG | - | chr4.2:28099618-28099637 | None:intergenic | 40.0% | |
ATAGCTATGTCCATCCTAGT+TGG | - | chr4.2:28097958-28097977 | None:intergenic | 40.0% | |
ATCTCTGACAGTAGCATGAA+CGG | - | chr4.2:28097726-28097745 | None:intergenic | 40.0% | |
ATCTGCTGTAAATGCACGAA+TGG | + | chr4.2:28103277-28103296 | MS.gene031525:CDS | 40.0% | |
ATGAGTGAGTTAATTCTCGC+GGG | + | chr4.2:28099821-28099840 | MS.gene031525:intron | 40.0% | |
ATGCTAGTAGTAGTAGGCTA+AGG | - | chr4.2:28102751-28102770 | None:intergenic | 40.0% | |
ATGGAACATGCTAAAGCAGA+AGG | + | chr4.2:28103353-28103372 | MS.gene031525:CDS | 40.0% | |
ATTGAATGGGGATACTAACC+AGG | - | chr4.2:28097749-28097768 | None:intergenic | 40.0% | |
ATTGCATTGAAGCTGCAACA+TGG | - | chr4.2:28102350-28102369 | None:intergenic | 40.0% | |
CAGCGTAAGTTAACTCATAC+AGG | - | chr4.2:28099691-28099710 | None:intergenic | 40.0% | |
CATGAGTGAGTTAATTCTCG+CGG | + | chr4.2:28099820-28099839 | MS.gene031525:intron | 40.0% | |
CGGAATCGGATCATTTGATT+AGG | + | chr4.2:28101487-28101506 | MS.gene031525:intron | 40.0% | |
CTCTATGATTGATCAGGACT+CGG | + | chr4.2:28102081-28102100 | MS.gene031525:intron | 40.0% | |
CTGTATGAGTTAACTTACGC+TGG | + | chr4.2:28099689-28099708 | MS.gene031525:intron | 40.0% | |
CTTATATCACGTTCGCTACA+TGG | - | chr4.2:28099783-28099802 | None:intergenic | 40.0% | |
GAATACACAACCAAGTGGAT+GGG | + | chr4.2:28102712-28102731 | MS.gene031525:CDS | 40.0% | |
GCAAGATTTGAGCAGGTTTA+TGG | - | chr4.2:28102564-28102583 | None:intergenic | 40.0% | |
GCTAAAAACCCATCAACAAC+CGG | + | chr4.2:28101591-28101610 | MS.gene031525:intron | 40.0% | |
GGCACCTGTAACACAATATT+TGG | - | chr4.2:28097651-28097670 | None:intergenic | 40.0% | |
GTATGAGTTAACTTACGCTG+GGG | + | chr4.2:28099691-28099710 | MS.gene031525:intron | 40.0% | |
GTTGAAGCTCTTCTTCAAAG+AGG | + | chr4.2:28097695-28097714 | MS.gene031525:CDS | 40.0% | |
TATGCTACAACTCTACAGCA+CGG | - | chr4.2:28103050-28103069 | None:intergenic | 40.0% | |
TCTGCTGTAAATGCACGAAT+GGG | + | chr4.2:28103278-28103297 | MS.gene031525:CDS | 40.0% | |
TGCGAAAAATAGCAGTGTGT+AGG | - | chr4.2:28103079-28103098 | None:intergenic | 40.0% | |
TGTCATTGTCCAACAACCAA+GGG | + | chr4.2:28101793-28101812 | MS.gene031525:intron | 40.0% | |
TTGTCATTGTCCAACAACCA+AGG | + | chr4.2:28101792-28101811 | MS.gene031525:intron | 40.0% | |
! | ATCTTTGGGTTCATCGGAAT+CGG | + | chr4.2:28101473-28101492 | MS.gene031525:intron | 40.0% |
! | CGCAACAAAAATTTGGGGTA+TGG | - | chr4.2:28103898-28103917 | None:intergenic | 40.0% |
! | GTTATAACAAGCACTGTTGC+AGG | + | chr4.2:28102900-28102919 | MS.gene031525:CDS | 40.0% |
!! | GTTGGCTTAGTTCGGTTTTT+AGG | + | chr4.2:28100743-28100762 | MS.gene031525:intron | 40.0% |
!! | TCCATGTTGGTTTAATGGGT+TGG | + | chr4.2:28100725-28100744 | MS.gene031525:intron | 40.0% |
AAATGGGCCCAAACCATTCA+AGG | - | chr4.2:28101552-28101571 | None:intergenic | 45.0% | |
AATGGGCCCAAACCATTCAA+GGG | - | chr4.2:28101551-28101570 | None:intergenic | 45.0% | |
AGCTTCGATGAGGCAGTAAA+AGG | + | chr4.2:28102309-28102328 | MS.gene031525:CDS | 45.0% | |
AGTGGCGTAATTGGAGATTC+AGG | + | chr4.2:28098916-28098935 | MS.gene031525:intron | 45.0% | |
ATCCCTTCCCTTGAATGGTT+TGG | + | chr4.2:28101541-28101560 | MS.gene031525:intron | 45.0% | |
ATGTCAGAACAGCAACAGTC+CGG | - | chr4.2:28101613-28101632 | None:intergenic | 45.0% | |
CAGCGCGGAAAAATCTCAAT+TGG | - | chr4.2:28102272-28102291 | None:intergenic | 45.0% | |
CAGCGTGAGTTAACTCATGT+AGG | - | chr4.2:28099660-28099679 | None:intergenic | 45.0% | |
CCAAGTGGATGGGTAAGTAA+TGG | + | chr4.2:28102722-28102741 | MS.gene031525:intron | 45.0% | |
CCATGAACCAATATACCCTG+TGG | - | chr4.2:28097672-28097691 | None:intergenic | 45.0% | |
CCATTACTTACCCATCCACT+TGG | - | chr4.2:28102725-28102744 | None:intergenic | 45.0% | |
CTACATGAGTTAACTCACGC+TGG | + | chr4.2:28099658-28099677 | MS.gene031525:intron | 45.0% | |
CTGCTGTAAATGCACGAATG+GGG | + | chr4.2:28103279-28103298 | MS.gene031525:CDS | 45.0% | |
GAACGTGATATAAGTCACGC+TGG | + | chr4.2:28099789-28099808 | MS.gene031525:intron | 45.0% | |
GAAGATCACATCACCAACTC+CGG | - | chr4.2:28103954-28103973 | None:intergenic | 45.0% | |
GAGGCAGTAAAAGGATGTGA+TGG | + | chr4.2:28102318-28102337 | MS.gene031525:CDS | 45.0% | |
GAGTGTTACCTTAGCGTAGT+TGG | - | chr4.2:28103452-28103471 | None:intergenic | 45.0% | |
GCCAACCCATTAAACCAACA+TGG | - | chr4.2:28100729-28100748 | None:intergenic | 45.0% | |
GGAATACACAACCAAGTGGA+TGG | + | chr4.2:28102711-28102730 | MS.gene031525:CDS | 45.0% | |
GTGTGGAATACACAACCAAG+TGG | + | chr4.2:28102707-28102726 | MS.gene031525:CDS | 45.0% | |
GTTATGCTGTCCTCACTAAC+AGG | + | chr4.2:28102960-28102979 | MS.gene031525:CDS | 45.0% | |
GTTCATTGTGAGCATTCCCT+TGG | - | chr4.2:28101812-28101831 | None:intergenic | 45.0% | |
TCACGTGAGTTAACTCATGC+AGG | - | chr4.2:28099754-28099773 | None:intergenic | 45.0% | |
TCCCTTCCCTTGAATGGTTT+GGG | + | chr4.2:28101542-28101561 | MS.gene031525:intron | 45.0% | |
TGGGCCCATTTGGTATTTGT+TGG | + | chr4.2:28101561-28101580 | MS.gene031525:intron | 45.0% | |
TGTGTGTTTGGTTGTGTCGT+GGG | - | chr4.2:28098178-28098197 | None:intergenic | 45.0% | |
TGTTCCTGTAGGAACACATG+AGG | + | chr4.2:28103921-28103940 | MS.gene031525:intron | 45.0% | |
TTGTTGCGCATTGTTCCTGT+AGG | + | chr4.2:28103910-28103929 | MS.gene031525:intron | 45.0% | |
! | ATTGTGTTACAGGTGCCACA+GGG | + | chr4.2:28097654-28097673 | MS.gene031525:CDS | 45.0% |
! | TATTGTGTTACAGGTGCCAC+AGG | + | chr4.2:28097653-28097672 | MS.gene031525:CDS | 45.0% |
! | TGCATCGGTCACGAATTTGA+CGG | - | chr4.2:28101935-28101954 | None:intergenic | 45.0% |
! | TTGAATGGTTTGGGCCCATT+TGG | + | chr4.2:28101551-28101570 | MS.gene031525:intron | 45.0% |
!! | CCACAGGGTATATTGGTTCA+TGG | + | chr4.2:28097669-28097688 | MS.gene031525:CDS | 45.0% |
!! | AATAATATTAAAAAATATGA+TGG | + | chr4.2:28101331-28101350 | MS.gene031525:intron | 5.0% |
!! | TTAATATACATATTAAAAAA+AGG | - | chr4.2:28103478-28103497 | None:intergenic | 5.0% |
!!! | ATATTTTTCTTTTTTTAAAA+GGG | - | chr4.2:28099481-28099500 | None:intergenic | 5.0% |
!!! | ATTTTTTTATGTAAAAAAAA+AGG | + | chr4.2:28099129-28099148 | MS.gene031525:intron | 5.0% |
!!! | TAAAAAAATTATTTTTTTGA+AGG | - | chr4.2:28101023-28101042 | None:intergenic | 5.0% |
!!! | TAAATAATTCTTTTTTTTAA+AGG | - | chr4.2:28100313-28100332 | None:intergenic | 5.0% |
!!! | TATATTTTTCTTTTTTTAAA+AGG | - | chr4.2:28099482-28099501 | None:intergenic | 5.0% |
!!! | TATTTTCTTAAAAATAAAAA+AGG | + | chr4.2:28099088-28099107 | MS.gene031525:intron | 5.0% |
!!! | TTTTTTCAAAAAAATAAATA+AGG | + | chr4.2:28103762-28103781 | MS.gene031525:intron | 5.0% |
!!! | TTTTTTTTTATGTAAAAAAA+AGG | + | chr4.2:28099021-28099040 | MS.gene031525:intron | 5.0% |
ACACCTCCTGTCATTGTGGA+AGG | + | chr4.2:28102239-28102258 | MS.gene031525:CDS | 50.0% | |
AGCAACAGTCCGGTTGTTGA+TGG | - | chr4.2:28101603-28101622 | None:intergenic | 50.0% | |
AGCGGTAGTTAACTACCGCT+AGG | + | chr4.2:28101713-28101732 | MS.gene031525:intron | 50.0% | |
ATGCCTGGACTCCACATCTT+TGG | + | chr4.2:28103981-28104000 | MS.gene031525:CDS | 50.0% | |
CACCTCCTGTCATTGTGGAA+GGG | + | chr4.2:28102240-28102259 | MS.gene031525:CDS | 50.0% | |
CAGCGTGAGTTAACTCATGC+AGG | - | chr4.2:28099722-28099741 | None:intergenic | 50.0% | |
CATGCTACTGTCAGAGATCC+TGG | + | chr4.2:28097728-28097747 | MS.gene031525:CDS | 50.0% | |
CGAAGAAGGAAGCTTCGATG+AGG | + | chr4.2:28102299-28102318 | MS.gene031525:CDS | 50.0% | |
CGTTACACCTCCTGTCATTG+TGG | + | chr4.2:28102235-28102254 | MS.gene031525:CDS | 50.0% | |
CTTCTTCGTGCAAATCAGCG+CGG | - | chr4.2:28102287-28102306 | None:intergenic | 50.0% | |
GAACACATGAGGTGGATCAC+CGG | + | chr4.2:28103932-28103951 | MS.gene031525:CDS | 50.0% | |
GCAACAGTCCGGTTGTTGAT+GGG | - | chr4.2:28101602-28101621 | None:intergenic | 50.0% | |
GCATGAGTTAACTCACGCTG+TGG | + | chr4.2:28099722-28099741 | MS.gene031525:intron | 50.0% | |
GCCCAAACCATTCAAGGGAA+GGG | - | chr4.2:28101546-28101565 | None:intergenic | 50.0% | |
GTACGCTCCTTCTCCAAGTT+GGG | + | chr4.2:28104006-28104025 | MS.gene031525:CDS | 50.0% | |
GTGAGCATTCCCTTGGTTGT+TGG | - | chr4.2:28101805-28101824 | None:intergenic | 50.0% | |
GTGTGTGTTTGGTTGTGTCG+TGG | - | chr4.2:28098179-28098198 | None:intergenic | 50.0% | |
TACGCTCCTTCTCCAAGTTG+GGG | + | chr4.2:28104007-28104026 | MS.gene031525:CDS | 50.0% | |
TAGCGGTAGTTAACTACCGC+TGG | - | chr4.2:28101714-28101733 | None:intergenic | 50.0% | |
TATACCCCCCAACTTGGAGA+AGG | - | chr4.2:28104016-28104035 | None:intergenic | 50.0% | |
TCCAAGTATACCCCCCAACT+TGG | - | chr4.2:28104022-28104041 | None:intergenic | 50.0% | |
TCCACCTCATGTGTTCCTAC+AGG | - | chr4.2:28103928-28103947 | None:intergenic | 50.0% | |
TCCTGTAGGAACACATGAGG+TGG | + | chr4.2:28103924-28103943 | MS.gene031525:intron | 50.0% | |
TGCCTGGACTCCACATCTTT+GGG | + | chr4.2:28103982-28104001 | MS.gene031525:CDS | 50.0% | |
TTGATCAGGTCTCGAGTGAC+TGG | + | chr4.2:28101355-28101374 | MS.gene031525:intron | 50.0% | |
! | ACAGGTGCCACAGGGTATAT+TGG | + | chr4.2:28097662-28097681 | MS.gene031525:CDS | 50.0% |
! | TCCAAGTTGGGGGGTATACT+TGG | + | chr4.2:28104018-28104037 | MS.gene031525:CDS | 50.0% |
AGATGTGGAGTCCAGGCATG+AGG | - | chr4.2:28103980-28103999 | None:intergenic | 55.0% | |
ATGAGGTGGATCACCGGAGT+TGG | + | chr4.2:28103938-28103957 | MS.gene031525:CDS | 55.0% | |
CACCACCCTTCCACAATGAC+AGG | - | chr4.2:28102248-28102267 | None:intergenic | 55.0% | |
CACCCTTCCACAATGACAGG+AGG | - | chr4.2:28102245-28102264 | None:intergenic | 55.0% | |
CGTACGCTCCTTCTCCAAGT+TGG | + | chr4.2:28104005-28104024 | MS.gene031525:CDS | 55.0% | |
CTCCTGTCATTGTGGAAGGG+TGG | + | chr4.2:28102243-28102262 | MS.gene031525:CDS | 55.0% | |
CTGCGGTAGTTAACTGCTGC+CGG | + | chr4.2:28101673-28101692 | MS.gene031525:intron | 55.0% | |
GGCAGCAGTTAACTACCGCA+GGG | - | chr4.2:28101674-28101693 | None:intergenic | 55.0% | |
GGCCCAAACCATTCAAGGGA+AGG | - | chr4.2:28101547-28101566 | None:intergenic | 55.0% | |
GTACTACTACTTGTGGCCCG+TGG | + | chr4.2:28099505-28099524 | MS.gene031525:intron | 55.0% | |
TGATGAAGGGGGGACCAACT+AGG | + | chr4.2:28097941-28097960 | MS.gene031525:intron | 55.0% | |
! | ACGCTCCTTCTCCAAGTTGG+GGG | + | chr4.2:28104008-28104027 | MS.gene031525:CDS | 55.0% |
!! | CGCGCTGATTTGCACGAAGA+AGG | + | chr4.2:28102285-28102304 | MS.gene031525:CDS | 55.0% |
CGCCCAAAGATGTGGAGTCC+AGG | - | chr4.2:28103987-28104006 | None:intergenic | 60.0% | |
CGGCAGCAGTTAACTACCGC+AGG | - | chr4.2:28101675-28101694 | None:intergenic | 60.0% | |
GAAGGGGGGACCAACTAGGA+TGG | + | chr4.2:28097945-28097964 | MS.gene031525:intron | 60.0% | |
GGAGCGTACGCCCAAAGATG+TGG | - | chr4.2:28103995-28104014 | None:intergenic | 60.0% | |
TGATCTTCGCGCCTCATGCC+TGG | + | chr4.2:28103966-28103985 | MS.gene031525:CDS | 60.0% | |
! | CGCTCCTTCTCCAAGTTGGG+GGG | + | chr4.2:28104009-28104028 | MS.gene031525:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 28097596 | 28104084 | 28097596 | ID=MS.gene031525 |
chr4.2 | mRNA | 28097596 | 28104084 | 28097596 | ID=MS.gene031525.t1;Parent=MS.gene031525 |
chr4.2 | exon | 28097596 | 28097749 | 28097596 | ID=MS.gene031525.t1.exon1;Parent=MS.gene031525.t1 |
chr4.2 | CDS | 28097596 | 28097749 | 28097596 | ID=cds.MS.gene031525.t1;Parent=MS.gene031525.t1 |
chr4.2 | exon | 28102229 | 28102396 | 28102229 | ID=MS.gene031525.t1.exon2;Parent=MS.gene031525.t1 |
chr4.2 | CDS | 28102229 | 28102396 | 28102229 | ID=cds.MS.gene031525.t1;Parent=MS.gene031525.t1 |
chr4.2 | exon | 28102516 | 28102733 | 28102516 | ID=MS.gene031525.t1.exon3;Parent=MS.gene031525.t1 |
chr4.2 | CDS | 28102516 | 28102733 | 28102516 | ID=cds.MS.gene031525.t1;Parent=MS.gene031525.t1 |
chr4.2 | exon | 28102822 | 28102981 | 28102822 | ID=MS.gene031525.t1.exon4;Parent=MS.gene031525.t1 |
chr4.2 | CDS | 28102822 | 28102981 | 28102822 | ID=cds.MS.gene031525.t1;Parent=MS.gene031525.t1 |
chr4.2 | exon | 28103252 | 28103462 | 28103252 | ID=MS.gene031525.t1.exon5;Parent=MS.gene031525.t1 |
chr4.2 | CDS | 28103252 | 28103462 | 28103252 | ID=cds.MS.gene031525.t1;Parent=MS.gene031525.t1 |
chr4.2 | exon | 28103555 | 28103651 | 28103555 | ID=MS.gene031525.t1.exon6;Parent=MS.gene031525.t1 |
chr4.2 | CDS | 28103555 | 28103651 | 28103555 | ID=cds.MS.gene031525.t1;Parent=MS.gene031525.t1 |
chr4.2 | exon | 28103932 | 28104084 | 28103932 | ID=MS.gene031525.t1.exon7;Parent=MS.gene031525.t1 |
chr4.2 | CDS | 28103932 | 28104084 | 28103932 | ID=cds.MS.gene031525.t1;Parent=MS.gene031525.t1 |
Gene Sequence |
Protein sequence |