AlfalfaGEDB | MS.gene96808

M. sativa cultivar XinJiangDaYe / MS.gene96808

KEGG: -
GO: GO:0003674 GO:0003824 GO:0005488 GO:0048037 GO:0050662
PFAM: PF01370.24

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene96808.t1	XP_013456728.1	96.8	342	11	0	1	342	1	342	1.40E-184	655.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene96808.t1	Q5XLY0	46.2	327	157	5	21	340	12	326	1.4e-71	271.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene96808.t1	A0A072ULV1	96.8	342	11	0	1	342	1	342	1.0e-184	655.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene04925	MS.gene96808	0.8083	3.31E-50	-1.69E-46
MS.gene049813	MS.gene96808	0.810013	1.42E-50	-1.69E-46
MS.gene052211	MS.gene96808	0.814609	1.41E-51	-1.69E-46
MS.gene05240	MS.gene96808	0.801422	9.07E-49	-1.69E-46
MS.gene052606	MS.gene96808	0.811353	7.30E-51	-1.69E-46
MS.gene053097	MS.gene96808	0.813878	2.05E-51	-1.69E-46
MS.gene053420	MS.gene96808	0.807728	4.39E-50	-1.69E-46
MS.gene053887	MS.gene96808	0.810281	1.25E-50	-1.69E-46
MS.gene054742	MS.gene96808	0.802132	6.49E-49	-1.69E-46
MS.gene05589	MS.gene96808	-0.800652	1.30E-48	-1.69E-46
MS.gene056748	MS.gene96808	0.823399	1.41E-53	-1.69E-46
MS.gene056856	MS.gene96808	0.802566	5.28E-49	-1.69E-46
MS.gene056920	MS.gene96808	0.819713	1.01E-52	-1.69E-46
MS.gene058099	MS.gene96808	0.80257	5.27E-49	-1.69E-46
MS.gene058334	MS.gene96808	0.822301	2.55E-53	-1.69E-46
MS.gene058603	MS.gene96808	0.83683	7.44E-57	-1.69E-46
MS.gene060087	MS.gene96808	0.830116	3.52E-55	-1.69E-46
MS.gene060593	MS.gene96808	0.802878	4.55E-49	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene016246	MS.gene96808	PPI
MS.gene96808	MS.gene92808	PPI
MS.gene96808	MS.gene016248	PPI
MS.gene92809	MS.gene96808	PPI
MS.gene96808	MS.gene27778	PPI
MS.gene016249	MS.gene96808	PPI
MS.gene96808	MS.gene27554	PPI
MS.gene96808	MS.gene27550	PPI
MS.gene96808	MS.gene071398	PPI
MS.gene27553	MS.gene96808	PPI
MS.gene028567	MS.gene96808	PPI
MS.gene92810	MS.gene96808	PPI
MS.gene27776	MS.gene96808	PPI
MS.gene071401	MS.gene96808	PPI
MS.gene27551	MS.gene96808	PPI
MS.gene96808	MS.gene27552	PPI
MS.gene96808	MS.gene92812	PPI
MS.gene96808	MS.gene27775	PPI
MS.gene96808	MS.gene27779	PPI
MS.gene92811	MS.gene96808	PPI
MS.gene96808	MS.gene016245	PPI
MS.gene40148	MS.gene96808	PPI
MS.gene96808	MS.gene40154	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene96808.t1	MTR_4g081440	96.784	342	11	0	1	342	1	342	0.0	685
MS.gene96808.t1	MTR_4g081440	96.450	338	11	1	5	342	1	337	0.0	671
MS.gene96808.t1	MTR_1g022445	42.813	327	152	8	25	340	9	311	1.46e-85	263
MS.gene96808.t1	MTR_1g022440	41.590	327	156	8	25	340	9	311	1.53e-80	251
MS.gene96808.t1	MTR_4g092080	38.580	324	179	6	23	339	13	323	2.35e-70	224
MS.gene96808.t1	MTR_7g074880	38.037	326	176	8	22	340	6	312	2.81e-68	219
MS.gene96808.t1	MTR_7g074730	37.117	326	181	7	22	340	6	314	7.22e-67	215
MS.gene96808.t1	MTR_7g074850	37.117	326	182	8	22	340	6	315	2.27e-65	211
MS.gene96808.t1	MTR_7g074820	37.730	326	180	9	22	340	6	315	2.53e-63	206
MS.gene96808.t1	MTR_8g062440	38.757	338	166	7	25	346	9	321	5.85e-63	205
MS.gene96808.t1	MTR_8g062440	38.643	339	166	7	25	346	9	322	1.18e-62	204
MS.gene96808.t1	MTR_7g074710	34.356	326	188	7	22	340	6	312	3.52e-61	200
MS.gene96808.t1	MTR_8g062110	40.252	318	156	7	25	333	10	302	5.56e-61	200
MS.gene96808.t1	MTR_8g062440	42.807	285	130	5	25	301	9	268	7.76e-61	199
MS.gene96808.t1	MTR_8g062110	40.252	318	156	7	25	333	19	311	1.06e-60	199
MS.gene96808.t1	MTR_8g062110	42.105	285	132	5	25	301	10	269	5.77e-59	193
MS.gene96808.t1	MTR_4g077100	40.491	326	162	10	25	340	12	315	6.93e-59	194
MS.gene96808.t1	MTR_8g062110	42.105	285	132	5	25	301	10	269	8.03e-59	193
MS.gene96808.t1	MTR_4g077100	42.500	280	139	7	25	301	12	272	4.97e-58	191
MS.gene96808.t1	MTR_4g077130	39.009	323	171	8	25	340	10	313	5.14e-58	192
MS.gene96808.t1	MTR_2g101330	36.449	321	182	9	23	340	4	305	7.14e-58	192
MS.gene96808.t1	MTR_3g005170	38.608	316	165	9	25	333	11	304	2.11e-57	191
MS.gene96808.t1	MTR_4g023730	37.117	326	176	8	25	340	9	315	2.81e-57	190
MS.gene96808.t1	MTR_5g056600	38.199	322	176	8	23	340	3	305	4.41e-57	189
MS.gene96808.t1	MTR_3g005210	36.036	333	183	9	25	346	7	320	1.65e-56	188
MS.gene96808.t1	MTR_3g005170	42.966	263	122	8	25	281	11	251	8.08e-56	185
MS.gene96808.t1	MTR_7g074870	35.052	291	166	6	54	340	3	274	9.34e-52	174
MS.gene96808.t1	MTR_5g072620	37.898	314	170	9	25	333	6	299	5.99e-49	168
MS.gene96808.t1	MTR_4g009040	36.449	321	180	10	23	339	12	312	2.13e-48	167
MS.gene96808.t1	MTR_4g009040	35.826	321	178	10	23	339	12	308	1.46e-47	165
MS.gene96808.t1	MTR_3g031650	34.132	334	171	11	25	341	6	307	1.96e-43	154
MS.gene96808.t1	MTR_3g031650	36.268	284	151	9	25	301	6	266	1.35e-42	150
MS.gene96808.t1	MTR_4g006940	35.987	314	171	10	25	333	18	306	2.56e-42	151
MS.gene96808.t1	MTR_2g104960	35.987	314	171	10	25	333	21	309	3.10e-42	151
MS.gene96808.t1	MTR_4g009690	35.423	319	181	10	23	339	12	307	1.80e-41	149
MS.gene96808.t1	MTR_7g117190	31.832	333	202	12	22	340	5	326	3.26e-41	148
MS.gene96808.t1	MTR_2g013230	30.409	342	218	7	23	352	7	340	7.55e-41	147
MS.gene96808.t1	MTR_4g009690	35.110	319	183	10	23	339	12	308	2.16e-40	146
MS.gene96808.t1	MTR_3g005170	33.544	316	150	9	25	333	11	273	1.57e-39	143
MS.gene96808.t1	MTR_2g013250	30.211	331	207	7	23	340	6	325	2.16e-39	144
MS.gene96808.t1	MTR_7g117190	32.394	284	174	10	22	294	5	281	8.51e-39	141
MS.gene96808.t1	MTR_4g006940	36.014	286	154	9	25	305	18	279	8.47e-38	138
MS.gene96808.t1	MTR_4g006940	36.014	286	154	9	25	305	18	279	8.47e-38	138
MS.gene96808.t1	MTR_2g013260	30.372	349	209	8	22	351	6	339	4.19e-36	135
MS.gene96808.t1	MTR_2g028620	29.524	315	197	10	25	333	11	306	2.06e-32	125
MS.gene96808.t1	MTR_2g013260	31.034	290	181	6	23	301	7	288	2.61e-32	123
MS.gene96808.t1	MTR_2g028620	30.282	284	174	8	25	303	11	275	2.30e-30	119
MS.gene96808.t1	MTR_8g062110	35.268	224	121	5	116	333	11	216	6.03e-28	110
MS.gene96808.t1	MTR_8g062110	37.173	191	97	4	116	301	11	183	4.18e-26	103
MS.gene96808.t1	MTR_0164s0070	31.401	207	122	4	23	225	4	194	1.96e-25	102
MS.gene96808.t1	MTR_5g029990	27.215	316	193	14	25	334	13	297	3.73e-23	98.6
MS.gene96808.t1	MTR_2g013230	27.459	244	167	5	118	352	8	250	2.13e-20	90.1
MS.gene96808.t1	MTR_7g117190	28.440	218	141	8	134	340	3	216	1.24e-18	84.7
MS.gene96808.t1	MTR_6g406250	26.493	268	165	9	25	283	56	300	4.00e-18	85.5
MS.gene96808.t1	MTR_2g013260	27.559	254	160	6	114	351	23	268	3.84e-16	78.6
MS.gene96808.t1	MTR_6g406250	26.027	219	143	6	25	236	56	262	5.08e-15	74.7
MS.gene96808.t1	MTR_8g062710	32.500	120	69	3	5	120	1	112	8.25e-14	68.2
MS.gene96808.t1	MTR_3g101500	23.881	268	173	9	23	290	3	239	1.25e-12	68.6
MS.gene96808.t1	MTR_3g101500	23.881	268	173	9	23	290	3	239	2.74e-12	67.4
MS.gene96808.t1	MTR_3g011130	36.207	116	70	2	119	233	30	142	4.69e-11	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene96808.t1	AT4G27250	58.514	323	131	3	21	340	10	332	1.35e-133	387
MS.gene96808.t1	AT4G27250	57.276	323	125	4	21	340	10	322	2.48e-127	370
MS.gene96808.t1	AT5G42800	41.925	322	162	7	25	340	9	311	7.09e-81	253
MS.gene96808.t1	AT4G35420	40.373	322	169	8	22	340	6	307	3.65e-68	218
MS.gene96808.t1	AT1G09510	38.217	314	169	9	25	333	9	302	1.48e-62	204
MS.gene96808.t1	AT1G61720	36.842	323	192	4	21	340	10	323	5.80e-61	200
MS.gene96808.t1	AT1G51410	38.339	313	170	6	25	333	10	303	9.87e-59	194
MS.gene96808.t1	AT1G66800	36.335	322	175	8	25	339	9	307	2.21e-58	193
MS.gene96808.t1	AT5G19440	38.050	318	164	9	25	333	11	304	5.25e-57	189
MS.gene96808.t1	AT1G09490	35.093	322	183	8	25	339	9	311	5.40e-57	189
MS.gene96808.t1	AT2G45400	36.364	330	184	7	21	340	37	350	1.01e-54	185
MS.gene96808.t1	AT1G09480	39.464	261	136	6	25	282	9	250	3.33e-53	179
MS.gene96808.t1	AT1G09480	39.464	261	136	6	25	282	56	297	5.64e-53	180
MS.gene96808.t1	AT1G09500	36.170	282	159	6	25	303	9	272	1.24e-52	177
MS.gene96808.t1	AT1G09500	34.615	312	181	7	25	331	9	302	1.46e-52	178
MS.gene96808.t1	AT5G58490	39.564	321	168	11	25	340	10	309	1.27e-51	175
MS.gene96808.t1	AT1G68540	35.780	327	181	10	22	340	2	307	1.95e-51	175
MS.gene96808.t1	AT2G33590	36.000	325	181	10	19	339	4	305	8.10e-50	171
MS.gene96808.t1	AT2G45400	35.640	289	163	5	21	301	37	310	3.69e-49	169
MS.gene96808.t1	AT2G33600	37.651	332	168	12	18	339	3	305	1.39e-46	162
MS.gene96808.t1	AT2G02400	33.228	316	180	9	25	333	7	298	2.43e-45	159
MS.gene96808.t1	AT1G25460	34.985	323	187	9	22	340	2	305	9.08e-45	157
MS.gene96808.t1	AT2G45400	34.564	298	174	6	48	340	12	293	1.28e-42	151
MS.gene96808.t1	AT1G09490	30.903	288	179	6	47	333	3	271	2.86e-42	150
MS.gene96808.t1	AT1G76470	32.817	323	195	7	23	341	6	310	9.66e-42	149
MS.gene96808.t1	AT1G15950	33.121	314	180	9	25	333	14	302	2.10e-41	149
MS.gene96808.t1	AT1G15950	33.121	314	180	9	25	333	14	302	3.10e-41	149
MS.gene96808.t1	AT1G15950	33.121	314	180	9	25	333	14	302	3.10e-41	149
MS.gene96808.t1	AT1G80820	33.651	315	179	10	25	334	9	298	6.84e-40	145
MS.gene96808.t1	AT1G15950	33.562	292	165	8	25	311	14	281	2.23e-38	140
MS.gene96808.t1	AT1G15950	33.916	286	160	8	25	305	14	275	3.68e-38	139
MS.gene96808.t1	AT1G15950	33.916	286	160	8	25	305	14	275	5.21e-38	138
MS.gene96808.t1	AT2G45400	37.611	226	125	4	21	238	37	254	1.12e-37	137
MS.gene96808.t1	AT1G09500	31.183	279	172	6	54	330	7	267	5.28e-37	136
MS.gene96808.t1	AT1G80820	33.916	286	160	9	25	305	9	270	3.71e-35	130
MS.gene96808.t1	AT2G23910	27.170	265	165	7	25	286	11	250	3.81e-26	106
MS.gene96808.t1	AT2G23910	27.170	265	165	7	25	286	11	250	4.43e-26	106
MS.gene96808.t1	AT2G23910	27.170	265	165	7	25	286	11	250	6.34e-26	106
MS.gene96808.t1	AT4G30470	27.881	269	165	8	21	286	7	249	1.72e-23	99.8
MS.gene96808.t1	AT1G68540	30.698	215	129	6	131	340	1	200	3.38e-20	88.6
MS.gene96808.t1	AT1G15950	29.817	218	136	7	119	333	1	204	6.30e-17	80.1
MS.gene96808.t1	AT2G23910	26.147	218	136	6	69	286	24	216	6.65e-17	80.5
MS.gene96808.t1	AT4G33360	22.939	279	181	9	23	298	14	261	1.54e-16	80.1
MS.gene96808.t1	AT4G33360	22.939	279	181	9	23	298	2	249	2.42e-16	79.7
MS.gene96808.t1	AT5G14700	26.937	271	165	10	25	283	56	305	8.55e-15	75.5
MS.gene96808.t1	AT5G14700	25.792	221	146	7	25	236	56	267	4.22e-11	63.9

Find 84 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCAAGATTTGAGCAGGTTTA+TGG	0.190488	4.3:-28624404	None:intergenic
CTCAAAGAAGCTAAAAGATT+TGG	0.192018	4.3:+28625623	MS.gene96808:CDS
ACACAGTGTCAGTTTGTATT+TGG	0.230014	4.3:-28624531	None:intergenic
ATGCCTGGACTCCACATCTT+TGG	0.242242	4.3:+28626007	MS.gene96808:CDS
GGCACCTGTAACACAATATT+TGG	0.281952	4.3:-28619238	None:intergenic
TTTATGGTTCCTTTGATTGC+AGG	0.296003	4.3:-28624388	None:intergenic
GTACGCTCCTTCTCCAAGTT+GGG	0.300401	4.3:+28626032	MS.gene96808:CDS
ACTGCCAAATATTGTGTTAC+AGG	0.302149	4.3:+28619234	MS.gene96808:CDS
TCAAAGAAGCTAAAAGATTT+GGG	0.330800	4.3:+28625624	MS.gene96808:CDS
TTTAAATTTGCTATAGAGAA+TGG	0.338852	4.3:+28624704	MS.gene96808:CDS
ACAGGTGCCACAGGGTATAT+TGG	0.354757	4.3:+28619252	MS.gene96808:CDS
AGTTGGATTAGAATACTCTT+TGG	0.355460	4.3:-28625458	None:intergenic
TGAAATCCAATTCTGTGAAA+AGG	0.362071	4.3:+28624428	MS.gene96808:CDS
TGATCTTCGCGCCTCATGCC+TGG	0.362792	4.3:+28625992	MS.gene96808:CDS
CAATGCTCACATATTCTTGA+TGG	0.364605	4.3:+28625360	MS.gene96808:CDS
TGCCTGGACTCCACATCTTT+GGG	0.371118	4.3:+28626008	MS.gene96808:CDS
CCACAGGGTATATTGGTTCA+TGG	0.374216	4.3:+28619259	MS.gene96808:CDS
AGCTTCGATGAGGCAGTAAA+AGG	0.376180	4.3:+28624150	MS.gene96808:CDS
GTTATGCTGTCCTCGCTATC+AGG	0.380227	4.3:+28624803	MS.gene96808:CDS
TGGCAAGATTCATCAACAAT+AGG	0.382737	4.3:-28624511	None:intergenic
TTTGATGTACTATTTCTTCA+AGG	0.382990	4.3:-28625665	None:intergenic
GAAACAAGAGCTGCCAAGTT+AGG	0.387233	4.3:-28625436	None:intergenic
GTTATAACAAGTACTGTTGC+AGG	0.391371	4.3:+28624743	MS.gene96808:CDS
CGTACGCTCCTTCTCCAAGT+TGG	0.395103	4.3:+28626031	MS.gene96808:CDS
CGCGCTGATTTGCACGAAGA+AGG	0.398678	4.3:+28624126	MS.gene96808:CDS
GAGTATTACCTTAGCGTAGT+TGG	0.404324	4.3:-28625475	None:intergenic
GAAATCCAATTCTGTGAAAA+GGG	0.430378	4.3:+28624429	MS.gene96808:CDS
TTAAATTTGCTATAGAGAAT+GGG	0.446172	4.3:+28624705	MS.gene96808:CDS
GGTGGTAATGAAGGAAGAAA+TGG	0.456131	4.3:+28619167	None:intergenic
TCTGCTGTAAATGCACGAAT+GGG	0.461394	4.3:+28625304	MS.gene96808:CDS
CATGCTACTGTCAGAGATCC+TGG	0.464239	4.3:+28619318	MS.gene96808:CDS
AGCATAACTTTAACACTTGA+AGG	0.476014	4.3:-28624788	None:intergenic
AAGCTGTACACTGCCTAACT+TGG	0.485427	4.3:+28625423	MS.gene96808:CDS
TTATGGTTCCTTTGATTGCA+GGG	0.488008	4.3:-28624387	None:intergenic
CCATTACTTACCCATCCACT+TGG	0.492651	4.3:-28624565	None:intergenic
ATCTGCTGTAAATGCACGAA+TGG	0.493103	4.3:+28625303	MS.gene96808:CDS
ATTTCAAGCAAGATTTGAGC+AGG	0.496756	4.3:-28624411	None:intergenic
CTCTGATGTTAAAATAAGAC+AGG	0.500347	4.3:+28626074	MS.gene96808:CDS
TACGCTCCTTCTCCAAGTTG+GGG	0.501880	4.3:+28626033	MS.gene96808:CDS
CGCCCAAAGATGTGGAGTCC+AGG	0.504394	4.3:-28626010	None:intergenic
ACACCTCCTGTCATTGTGGA+AGG	0.512956	4.3:+28624080	MS.gene96808:CDS
TATTGTGTTACAGGTGCCAC+AGG	0.519643	4.3:+28619243	MS.gene96808:CDS
CTAAAGATAGCAATGGAAAG+TGG	0.532380	4.3:+28624485	MS.gene96808:CDS
CACCACCCTTCCACAATGAC+AGG	0.541255	4.3:-28624086	None:intergenic
GTTGAAGCTCTTCTTCAAAG+AGG	0.555164	4.3:+28619285	MS.gene96808:CDS
GGAATACACAACCAAGTGGA+TGG	0.556204	4.3:+28624554	MS.gene96808:CDS
ATCTCTGACAGTAGCATGAA+CGG	0.558337	4.3:-28619313	None:intergenic
ATAATTGACCCTGCAATCAA+AGG	0.559331	4.3:+28624379	MS.gene96808:CDS
AATGGAGGAAGCAATGAGGA+TGG	0.563316	4.3:+28619185	MS.gene96808:CDS
ATTACTGCTAAAGATAGCAA+TGG	0.565154	4.3:+28624478	MS.gene96808:CDS
CGTTACACCTCCTGTCATTG+TGG	0.567359	4.3:+28624076	MS.gene96808:CDS
GGAGCGTACGCCCAAAGATG+TGG	0.569024	4.3:-28626018	None:intergenic
ATGGAACATGCTAAAGCAGA+AGG	0.572323	4.3:+28625379	MS.gene96808:CDS
CACCTCCTGTCATTGTGGAA+GGG	0.580068	4.3:+28624081	MS.gene96808:CDS
TTCTTTGAGGAAATTTCAGT+AGG	0.580180	4.3:-28625609	None:intergenic
ATTCTAATCCAACTACGCTA+AGG	0.591677	4.3:+28625467	MS.gene96808:CDS
GAACACATGAGGTGGATCAC+CGG	0.592249	4.3:+28625958	MS.gene96808:CDS
GGTAATGAAGGAAGAAATGG+AGG	0.593995	4.3:+28619170	None:intergenic
ATGAGGTGGATCACCGGAGT+TGG	0.596042	4.3:+28625964	MS.gene96808:CDS
CGCTCCTTCTCCAAGTTGGG+GGG	0.597867	4.3:+28626035	MS.gene96808:CDS
GTAACACAATATTTGGCAGT+AGG	0.604825	4.3:-28619231	None:intergenic
ACGCTCCTTCTCCAAGTTGG+GGG	0.611997	4.3:+28626034	MS.gene96808:CDS
GAAGATCACATCACCAACTC+CGG	0.612539	4.3:-28625977	None:intergenic
AAGAAATGGAGGAAGCAATG+AGG	0.616615	4.3:+28619181	MS.gene96808:CDS
GAATACACAACCAAGTGGAT+GGG	0.623474	4.3:+28624555	MS.gene96808:CDS
AGATGTGGAGTCCAGGCATG+AGG	0.624712	4.3:-28626003	None:intergenic
TCCTGTAGGAACACATGAGG+TGG	0.627352	4.3:+28625950	MS.gene96808:intron
GTTAATGAGAAAGAAAACAT+TGG	0.627963	4.3:+28624216	MS.gene96808:CDS
TATAAAGTCACCTGATAGCG+AGG	0.644542	4.3:-28624813	None:intergenic
ATTGCATTGAAGCTGCAACA+TGG	0.647004	4.3:-28624188	None:intergenic
CTCCTGTCATTGTGGAAGGG+TGG	0.654676	4.3:+28624084	MS.gene96808:CDS
GAGGCAGTAAAAGGATGTGA+TGG	0.658885	4.3:+28624159	MS.gene96808:CDS
CGAAGAAGGAAGCTTCGATG+AGG	0.670075	4.3:+28624140	MS.gene96808:CDS
CACCCTTCCACAATGACAGG+AGG	0.673181	4.3:-28624083	None:intergenic
AACATGCTAAAGCAGAAGGT+AGG	0.675020	4.3:+28625383	MS.gene96808:CDS
AAATACAAACTGACACTGTG+TGG	0.677088	4.3:+28624533	MS.gene96808:CDS
CTGCTGTAAATGCACGAATG+GGG	0.681829	4.3:+28625305	MS.gene96808:CDS
TGTTCCTGTAGGAACACATG+AGG	0.689751	4.3:+28625947	MS.gene96808:intron
GTGTGGAATACACAACCAAG+TGG	0.719552	4.3:+28624550	MS.gene96808:CDS
CTTCTTCGTGCAAATCAGCG+CGG	0.720406	4.3:-28624125	None:intergenic
ATTGTGTTACAGGTGCCACA+GGG	0.721235	4.3:+28619244	MS.gene96808:CDS
GAAGAGTCAGAAATATGACA+AGG	0.727881	4.3:+28625584	MS.gene96808:CDS
TCTGATGTTAAAATAAGACA+GGG	0.734578	4.3:+28626075	MS.gene96808:CDS
CCATGAACCAATATACCCTG+TGG	0.749348	4.3:-28619259	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
chr4.3	gene	28619174	28626110	28619174	ID=MS.gene96808
chr4.3	mRNA	28619174	28626110	28619174	ID=MS.gene96808.t1;Parent=MS.gene96808
chr4.3	exon	28619174	28619339	28619174	ID=MS.gene96808.t1.exon1;Parent=MS.gene96808.t1
chr4.3	CDS	28619174	28619339	28619174	ID=cds.MS.gene96808.t1;Parent=MS.gene96808.t1
chr4.3	exon	28624070	28624237	28624070	ID=MS.gene96808.t1.exon2;Parent=MS.gene96808.t1
chr4.3	CDS	28624070	28624237	28624070	ID=cds.MS.gene96808.t1;Parent=MS.gene96808.t1
chr4.3	exon	28624359	28624576	28624359	ID=MS.gene96808.t1.exon3;Parent=MS.gene96808.t1
chr4.3	CDS	28624359	28624576	28624359	ID=cds.MS.gene96808.t1;Parent=MS.gene96808.t1
chr4.3	exon	28624665	28624824	28624665	ID=MS.gene96808.t1.exon4;Parent=MS.gene96808.t1
chr4.3	CDS	28624665	28624824	28624665	ID=cds.MS.gene96808.t1;Parent=MS.gene96808.t1
chr4.3	exon	28625278	28625488	28625278	ID=MS.gene96808.t1.exon5;Parent=MS.gene96808.t1
chr4.3	CDS	28625278	28625488	28625278	ID=cds.MS.gene96808.t1;Parent=MS.gene96808.t1
chr4.3	exon	28625581	28625677	28625581	ID=MS.gene96808.t1.exon6;Parent=MS.gene96808.t1
chr4.3	CDS	28625581	28625677	28625581	ID=cds.MS.gene96808.t1;Parent=MS.gene96808.t1
chr4.3	exon	28625958	28626110	28625958	ID=MS.gene96808.t1.exon7;Parent=MS.gene96808.t1
chr4.3	CDS	28625958	28626110	28625958	ID=cds.MS.gene96808.t1;Parent=MS.gene96808.t1

Gene Sequence

>MS.gene96808

ATGAAGGAAGAAATGGAGGAAGCAATGAGGATGGTGAGAAGCAGTGTTCAAATTGTTCCTACTGCCAAATATTGTGTTACAGGTGCCACAGGGTATATTGGTTCATGGCTTGTTGAAGCTCTTCTTCAAAGAGGTTGCACCGTTCATGCTACTGTCAGAGATCCTGGTTAGTATCCCCATTCAATCTCTTTTTTTCTTAGTACAGGGAGAAAGAATTAGGATCAAATAAATGATCAATTAAAACAGAAGCGTTAATGTGATTTCATTTGAGCTTAATTGGTGTTTATTTAATTGATCAATAGGTTTGTAAAATTAGATACTAGGCTATGAAATATTGCATAGTCCTACATTCAATTTTGATGAAGGGGGGACCAACTAGGATGGACATAGCTATACAATTTGATGCACAAGATATGAGTTTGTGTATGTTTGGTTTTGCATAGACAGGAATGATTTTGAGTTGAAGATAAATTAATTTATGTTTGAATATATTCATGTAAAAGCGAGTTAAACAATAAATTTAAATGTTAAAATCAATTCTAGAATCAAAGGTTATGAATTTTAACTTCAAGTAGAATTAATTCTAGAGATATAATCAATTCTACTTAAGAGCAACCAAACACACCATCTGAATTCTACACTTTTAAAATCAATTTTAATCACTTAAACTATGTTTGGTTTTACTTCTAGAGGTATCAAAATTGATTATGTACATGTTGATTCTACTTGAAGTTAGTATGTGTAACTTTTTATTCTAGAATTGATTTTCACACATAAATAAGAGCCCGTTTGTTATAGCTTTTTTAAGTAAAAAAAAAATCACTTTTAACAGTTTTGCATTCGTTTGTTACAACTTTTTTTAAAAATCAGAATCTAAAAAAAATCTAAAAACAGCTTCAAATGAGAAGCTGCTAAGAATAGCTTCTCAAAAAATAGATTCTTTTTAGAGGAGAGCGAAAATATGGTTTAAAATATTGAACTAATTTTGTAACAAAAAAATCTCTTTTATATAGTTGTATCAAAACAAACTAAATTATTTGTTTAAAAAAGTGATTTTTATTATGGTAAACAAACGCAAAAGAAATTCTGATTTTTCATAAAATCTCTAAAATATAATCTCTAAATTATTTTATGTCAAAATCACTTTTATTTTAATCCGTAACAAACGGACCCTAACTTTTAATAAAAATTACTTTTAAGGAAAATCAATTTTACATAATCAATTTTATCAAAATCAATTATTCCCACGACACAACCAAACACACACTTTAAAGTATGAAATTAGTCAACGGAAATCAGATTATACATAAATTTGAGTCTTAATTTGTATTTCCCTAAAAAAAGTCTTAATTTGTATTAATTTTGATGGTTTTAACATGTGTTTCTCTTTCTTCAAAAAAAAAAAAAAACATGTGTTTCTCTAAATTTGATTTTTTTTTTAAAGCAAAAGAAGAAAAAGAAAGAAAAAAAGTGGCGTAATTGGAGATTCAGGAAAAAAATTTCTTTTTTATAGACAAATAGTATTTACTAAATGATAGTGTTATTTTTTTTTTAAAAAGGAACTCAGTGACTATGTTCTTTTTTTTATGTAAAAAAAAAAGGAATTCAGTGATTATAGACAAATATTATTTACTAAATGATAGTGTTATTTTCTTAAAAAAGGAATTCAGTGACTATGTTCATTTTTTTATGTAAAAAAAAAAAAAGAAATTCAGTGATTATAGACAAATATTACTTGCTAAGTTTTTTTAATGGAGTCTACTAGTTAGAAATTTACTTTTAAAATAAATAAGTTGGTGTTTATAGTTTCTATCTATCTATATTATGTATGGTATCTATCAACTTACATATTCTCACAAAGACTAGAAGAAGCTTTTTCTAATCATTTAGTTTTAGCAAAGCATTTATGGAATAAAAGTCAACTTATACTCAATTTTAACATCATTGACATCCTAAAATGTGGAAGCATATAAATTTTTTTGGTGAGCAGAACATGTCGATATAGTACTACTTGTGGCCCGTGGCATCATTTCATCTTTTAATAAAATAAAATGAAAATTGCTCTTCTCCCAACAAAAAACATTCACTTCCATACAAATTGATCAAAATATCATCTACGTGAGTTAACTTACGTTCGGTATAACGAAGTATAACCTACATGAGTTAACTCACGCTGGTTTATAACCTGCATGAGTTAACTTACGCTGGGTATAACCTGCATGAGTTAACTCACGCTGGGGTTATAACCTACGTGATTTAACTCATGTGAAATGTACTATGTAGCGAACGTGATTTAAGTCACGCTGGGTATAACACATGAGTGAGTTAACTCACGCGGGATGTATTTTTATCAATTTGTATGAGAGTGAGTGTTTTTTTATTGGGAGAAGAGCAATTTTCAAATAAAATTGATCAAGTAGTTGAGCATAAATAATAAATGGACTTTAAATAAACCAAATCCATAGAGACAATTTGAATTTGAGTAGTGATATTTGAACAATTATTTTGGTGCAACTTTTGGAAATGAAGAGAGAGAATAAGAACATAATATGAATATGAAAGAGAAAATTGTCTAAAAATTGTACTAAAATGGTTGTACAAATATAATTTCTCTTTGAAATTGGTGTCTAGTTTTAATAAGGGAAATGTTAACTTGTGCCCTTAAGGCACAAGTTTGGAAGCCAAATTTAGAAATGATGTATTGGAATGCGTGCATTAAATTTAATCTTTAATGTTTTAATGAATTGAATGCACAAAATTTAAAGGAATATTTCTTTTTTTGGATTTCTTAACATGTGCCCTAAGGGCACAAGTTAACACTACCCTTTTAATAACCATTTTAAGATGAAACTAAATATCAACTCAAGTAGTTAATAACATATACCAAAAGAAAAAACGTTTGAAGAACTCAATTGAAATTTTGAGCTCAACAATATGTAATCAGACTTTACTTATTTATTGGTCGAATTCGACCAAAGAATTAACCTAAAAGAAAAATCCTTTAAAAAAAAGAATTATTTATTAGACAAATTTCTTCCTCTTAAAATGTTTAAATTAACTTGGCGAAAAAGTTTTGGATAGTAAATATAAATCTATAAATTAAGATTTATAAACCATGTGAAACTGATAAACGATAAACATTTCATTTTAAACAATTGAACGATAAATAATGATATGTTTTTTCTTTTAAAGAGTTTAGCAATGAAACTCACACACAATAGATACCAAGAGTGTTAAATTGTGAGTTCGAACTCGAGTCCAAACATAAATATCGAACAACATATTTGCATATGACGTGATTTTTTTTTTTTTTTATATATTTTATCCAAAGTCAGTCATATAAATTTTAACAGTTTTACTCATATTTTTAAATTTTATTTTTTATAAATTTGAAAAATATTTACCTTACAGTAATCATCCATGTTGGTGCACTAGAAGCAGGGATTTAATGGGTTGGTTTAGTTCGGTTTTTAGGAGAAAATAAATTCGAATCAATTAAAATAGTCGGTTTGGTTTTAACAATCTTTTCTCAGATATCAAAATCAAACCAAACAATGAAAAACAAGTTTGTTTTATTTGGTTCAATCGGATTGACTTTTTCAAAAATTTATTGAAAAAAAGCAAACAAAAAGTTACTTATTCAAACACTATTCACTTTTTATACTATTAAAATAAGTACATAAACAGATAAACTACAATGAAATCAATGCATGACTAAATATTTCTTTTTTTATCCTTCAAAAAAATAATTTTTTTAATAAATTCAATGTCTATATGTTTTTTTTTTTTGAGTATAAATTCAATGTCTATATGTTGAAAGTATATTTTTTTAAACATGCATTCAATCAAATCATTTCACAATATCTTTTATTCAAAAAAAAAAAATCATTTCACGATATCTGTTTGGCATGTTTTGATTGGATACATATGTAAAAAAATTACACCGACACATAAGAAATAATCTTTTTGTTAAGATAAAATCACTAATATAGTGAAATAAAAGAAATAATATTAAAATATGATGGTTTGATCAGGTCTCGAGTGACTGGTTTCGAACCCGAATTTATAAAAGTCGGGTTTGATTGATTTGGTTTACACCTGAATAAGGACAAAAAATCGAACCAATTTAGTTGAATTTGTTTAGATCTTTGGGTTCATCGGAATCGGATCATTTGATTAGGTTTTACACCCCCCCTAACTAGAAGAGTAAAATATCCCTTCCCTTGAATGGTTTGGGCCCATTTGGTATTTGTTGGACCATATGCTAAAAACCCATCATCAACCTGTTGCTGTTCTGACATCCAATATGTCTTGGAAACACAAGTAAATGACTAAAAAACCCAGCGGTAGTTAACTGCTGCCGGTTTTCTAGTTATAAGCCAGCGGTAGTTAACTACCGCTGGGAGTATTTTAGTATTTTACTTGTGTTTTTAAGAAGTTTATGATGTTAAAAAAACAATTGTCATTGTCCAACAACCAAGGGAATGCTCACAATGAACCTTGTTCATTTCTTCTTAACACTAACAGAAATGAAATTGTATGATCAACAAGGTCGGTGTGACACAACACAAGTGGTAGATTTTTGGTAATGGATTTTATCCGTCAAATTCGTGACCGATGCATATGAAGAAAAAAATTGTTAGTAAAAGCCAACCCTTAAATAAATTTCAGTTACCTCGATAAATAAATTAATTTATGCATTACGCACATAAATATCTTGATTTATCAAAAATAAAAAAAATATGAAACTCTATGATTGATCAGGACTCGGTGATTTCCGTCAAATGTAATGGTAAAAAATGGCCTTTCATTTCGATACATCCTTGATTTAATCCAATGCTTACTAATAATCTCATATATGAATATGATTCATTTTTGTTTGCTCTAATGTCACAGAAAAGTCGTTACACCTCCTGTCATTGTGGAAGGGTGGTGACCAATTGAGATTTTTCCGCGCTGATTTGCACGAAGAAGGAAGCTTCGATGAGGCAGTAAAAGGATGTGATGGTGTGTTCCATGTTGCAGCTTCAATGCAATTCAATGTTAATGAGAAAGAAAACATTGGTAATACAACGCATTGATAATCATCGAAGGACTTAACATATATATATTGATTTTTTAAATATTGTTTGTGCATTGGTAACTAACAGATTTTTGATATTTCATCTCGGTATTGAACTTGCAGAGAACTTTGTTCAAACAAATATAATTGACCCTGCAATCAAAGGAACCATAAACCTGCTCAAATCTTGCTTGAAATCCAATTCTGTGAAAAGGGTTGTTTTCACATCTTCTATAAGTACTATTACTGCTAAAGATAGCAATGGAAAGTGGAAACCTATTGTTGATGAATCTTGCCAAATACAAACTGACACTGTGTGGAATACACAACCAAGTGGATGGGTAAGTAATGGTTTCCTTAGCCTACTACTACTAGCATTGTTCACAAAATCGAAAATTGATTTCTTGAGTTTTTCTTTTTTCGTGATAGGTTTATGCACTTTCAAAGCTTCTCACAGAAGAAGCAGCATTTAAATTTGCTATAGAGAATGGGATTGATCTTGTTTCAGTTATAACAAGTACTGTTGCAGGCCCATTTTTCACTGCTAATGTGCCTTCAAGTGTTAAAGTTATGCTGTCCTCGCTATCAGGTGACTTTATAGTGCAGCGGAATTTGAACAAATTGTTATTGCTATGTGATATGCTACTTCGTATAAAATGTTAAATACGTAGTTATTGCCGTGTTATAGAGTTCTAGTATAGCAGAACCTACGCACTGCTATTTTTTGCAATCTGCGATTGACAACGCTGATGTCTAGTTGACTTTTATTTATATCATCAAATGTGTTTGAAATGAAAGCTAGGCTATGTTACTGAACAAGTTAGTATAAACGTTTATGTCTATAACTTCAACTATGAAAATTAATCTTGTCTAGGATCACACCTTAATGTTTACATGTATGAACTGTCTTTTGTACCGAATTCCCCGAGAATATTCAATGTGCATCATAAAGTGTAACATATACAACATTAAACTTCCATGCTTAAAATTCAACACGGGTTATTATAGTGACCACTGACCAAATGATTATGTCTACATATAGGTGAAACTGAAAACTACAAGATATTATCTGCTGTAAATGCACGAATGGGGTCAATTGCTTTAGTTCACATTGAAGATATATGCAATGCTCACATATTCTTGATGGAACATGCTAAAGCAGAAGGTAGGTACATATGCAGCACACAAAGCTGTACACTGCCTAACTTGGCAGCTCTTGTTTCCAAAGAGTATTCTAATCCAACTACGCTAAGGTAATACTCTTTCCTTTTTTTAATATGTGTATTAAATTCTTCAGGTTTTTTTTAATTCATATTTCTGATGTTGTTCCTACACATATATGCAGCAGGAAGAGTCAGAAATATGACAAGGTTCCTACTGAAATTTCCTCAAAGAAGCTAAAAGATTTGGGTTTCAGTTACAAGCATAGCCTTGAAGAAATAGTACATCAAACAATTATGTGTTGCCTAGATTATGGTTATTTACCTTCCGTTTAGCTACTAGTCTTTCAATGCCACTCTGTACATGATTCAAAGTAATTGAGCTTTTGTAGTTTTTTCACAAAAATAAATAAGGCAAAACTGCAGTATGGGTCTTTTAACTTAATTTAAAGTTTCAAATGTTACTTTTTTTCGTATCAAGTTAGTCATTTTTTTCATGTAAAGTCGGTCTTTTGGTAAACACTACCATACCCCAAATTTTTGTTGCGCATTGTTCCTGTAGGAACACATGAGGTGGATCACCGGAGTTGGTGATGTGATCTTCGCGCCTCATGCCTGGACTCCACATCTTTGGGCGTACGCTCCTTCTCCAAGTTGGGGGGTATACTTGGAAAGACACTCTGATGTTAAAATAAGACAGGGTGTGAGCACATAG

Protein sequence

>MS.gene96808.t1

MKEEMEEAMRMVRSSVQIVPTAKYCVTGATGYIGSWLVEALLQRGCTVHATVRDPEKSLHLLSLWKGGDQLRFFRADLHEEGSFDEAVKGCDGVFHVAASMQFNVNEKENIENFVQTNIIDPAIKGTINLLKSCLKSNSVKRVVFTSSISTITAKDSNGKWKPIVDESCQIQTDTVWNTQPSGWVYALSKLLTEEAAFKFAIENGIDLVSVITSTVAGPFFTANVPSSVKVMLSSLSGETENYKILSAVNARMGSIALVHIEDICNAHIFLMEHAKAEGRYICSTQSCTLPNLAALVSKEYSNPTTLSRKSQKYDKVPTEISSKKLKDLGFSYKHSLEEIEHMRWITGVGDVIFAPHAWTPHLWAYAPSPSWGVYLERHSDVKIRQGVST