AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene016426

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016426.t1 MTR_8g042750 96.501 686 22 1 11 694 3 688 0.0 1387
MS.gene016426.t1 MTR_3g011440 60.292 685 233 8 12 693 15 663 0.0 849
MS.gene016426.t1 MTR_7g088370 45.293 733 329 15 3 693 2 704 0.0 616
MS.gene016426.t1 MTR_5g013420 39.867 602 325 14 102 693 514 1088 2.52e-126 401
MS.gene016426.t1 MTR_5g013420 39.833 600 324 14 102 691 514 1086 3.79e-125 398
MS.gene016426.t1 MTR_4g010830 38.850 574 316 14 128 691 429 977 8.08e-115 369
MS.gene016426.t1 MTR_8g070070 41.556 450 245 12 226 665 317 758 1.42e-105 338
MS.gene016426.t1 MTR_1g035420 39.960 503 279 14 173 665 158 647 8.20e-105 333
MS.gene016426.t1 MTR_8g070075 40.089 449 251 10 226 664 310 750 8.52e-104 333
MS.gene016426.t1 MTR_8g071030 39.741 463 251 9 218 665 289 738 1.24e-102 330
MS.gene016426.t1 MTR_4g010550 38.990 495 252 14 200 691 14 461 1.31e-101 319
MS.gene016426.t1 MTR_1g035400 36.822 516 286 16 173 665 68 566 2.48e-92 298
MS.gene016426.t1 MTR_6g044690 36.571 525 280 17 173 664 60 564 3.07e-90 293
MS.gene016426.t1 MTR_0376s0030 36.207 522 290 16 170 663 55 561 2.00e-86 283
MS.gene016426.t1 MTR_6g061270 34.902 510 293 13 206 690 195 690 7.34e-85 282
MS.gene016426.t1 MTR_7g084090 34.442 511 295 13 206 690 257 753 1.60e-84 282
MS.gene016426.t1 MTR_6g061200 34.000 500 282 12 206 690 195 661 3.37e-80 269
MS.gene016426.t1 MTR_6g043960 33.678 484 274 16 192 664 35 482 5.38e-71 239
MS.gene016426.t1 MTR_1g048950 33.952 539 294 12 173 691 34 530 1.75e-69 237
MS.gene016426.t1 MTR_7g084090 35.433 381 221 10 206 570 257 628 7.43e-64 224
MS.gene016426.t1 MTR_2g054460 32.308 520 260 18 173 664 9 464 8.36e-63 216
MS.gene016426.t1 MTR_7g445710 31.047 554 271 23 162 689 70 538 9.79e-61 213
MS.gene016426.t1 MTR_7g445530 31.238 525 255 21 162 662 70 512 1.10e-57 204
MS.gene016426.t1 MTR_7g450730 29.511 532 273 17 162 689 67 500 1.49e-52 189
MS.gene016426.t1 MTR_7g052480 33.788 293 181 6 405 690 266 552 1.90e-42 162
MS.gene016426.t1 MTR_1g080340 28.743 334 170 8 407 690 267 582 3.90e-34 138
MS.gene016426.t1 MTR_5g018850 31.532 333 161 12 398 691 1200 1504 3.63e-30 128
MS.gene016426.t1 MTR_7g098390 28.739 341 174 10 401 692 380 700 3.48e-29 124
MS.gene016426.t1 MTR_8g078490 28.571 329 177 8 396 691 947 1250 7.76e-29 124
MS.gene016426.t1 MTR_1g069570 28.274 336 172 9 407 692 428 744 1.01e-28 122
MS.gene016426.t1 MTR_8g078505 30.368 326 172 11 392 689 235 533 1.63e-27 117
MS.gene016426.t1 MTR_4g132610 34.419 215 118 5 478 691 852 1044 1.78e-27 119
MS.gene016426.t1 MTR_7g445600 33.987 153 61 2 510 662 243 355 7.40e-23 101
MS.gene016426.t1 MTR_7g445600 32.386 176 96 8 162 335 66 220 1.30e-11 67.0
MS.gene016426.t1 MTR_1g098000 31.401 207 92 6 495 694 72 235 8.98e-21 96.7
MS.gene016426.t1 MTR_1g098370 31.401 207 92 6 495 694 75 238 9.74e-21 96.7
MS.gene016426.t1 MTR_1g069570 26.894 264 129 7 407 621 428 676 7.67e-18 88.2
MS.gene016426.t1 MTR_0071s0100 30.374 214 108 6 481 694 177 349 3.02e-16 81.6
MS.gene016426.t1 MTR_6g059310 27.094 203 110 5 492 694 87 251 5.22e-14 74.3
MS.gene016426.t1 MTR_6g059310 27.094 203 110 5 492 694 87 251 6.03e-14 74.3
MS.gene016426.t1 MTR_1g064770 44.444 63 34 1 490 551 28 90 6.73e-12 62.4
MS.gene016426.t1 MTR_7g445810 30.653 199 109 9 169 361 91 266 2.79e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016426.t1 AT1G73100 49.420 690 305 12 13 694 16 669 0.0 655
MS.gene016426.t1 AT5G04940 47.076 701 311 9 14 694 10 670 0.0 650
MS.gene016426.t1 AT5G04940 47.076 701 311 9 14 694 10 670 0.0 650
MS.gene016426.t1 AT1G17770 40.446 717 366 21 13 693 1 692 1.36e-153 461
MS.gene016426.t1 AT2G24740 46.211 541 235 13 168 694 257 755 6.79e-147 446
MS.gene016426.t1 AT2G35160 39.591 538 271 16 165 691 261 755 3.61e-109 348
MS.gene016426.t1 AT2G35160 39.591 538 271 16 165 691 297 791 9.36e-109 348
MS.gene016426.t1 AT2G35160 39.591 538 271 16 165 691 297 791 9.36e-109 348
MS.gene016426.t1 AT2G35160 39.591 538 271 16 165 691 297 791 9.36e-109 348
MS.gene016426.t1 AT2G35160 39.591 538 271 16 165 691 297 791 9.36e-109 348
MS.gene016426.t1 AT4G13460 38.142 506 289 12 173 665 145 639 2.59e-107 340
MS.gene016426.t1 AT4G13460 38.142 506 289 12 173 665 145 639 2.59e-107 340
MS.gene016426.t1 AT2G22740 38.302 530 302 12 173 690 270 786 2.58e-106 341
MS.gene016426.t1 AT2G22740 38.302 530 302 12 173 690 270 786 2.58e-106 341
MS.gene016426.t1 AT2G33290 37.376 503 294 11 173 665 149 640 3.21e-101 324
MS.gene016426.t1 AT2G33290 37.376 503 294 11 173 665 149 640 3.21e-101 324
MS.gene016426.t1 AT2G33290 37.376 503 294 11 173 665 149 640 3.21e-101 324
MS.gene016426.t1 AT2G33290 37.376 503 294 11 173 665 149 640 3.21e-101 324
MS.gene016426.t1 AT5G13960 35.185 486 284 12 226 690 11 486 7.88e-85 276
MS.gene016426.t1 AT5G13960 34.646 508 299 13 205 690 124 620 1.89e-84 279
MS.gene016426.t1 AT5G47150 41.509 212 117 4 173 382 118 324 8.55e-44 160
MS.gene016426.t1 AT2G05900 42.857 196 108 3 247 440 1 194 6.68e-42 155
MS.gene016426.t1 AT2G05900 51.163 86 33 1 609 694 236 312 1.43e-21 96.7
MS.gene016426.t1 AT3G04380 28.060 335 170 8 407 690 144 458 5.16e-37 145
MS.gene016426.t1 AT3G04380 28.060 335 170 8 407 690 144 458 5.48e-37 145
MS.gene016426.t1 AT3G04380 28.060 335 170 8 407 690 117 431 5.57e-37 145
MS.gene016426.t1 AT3G04380 28.060 335 170 8 407 690 128 442 5.89e-37 145
MS.gene016426.t1 AT3G04380 28.060 335 170 8 407 690 101 415 6.61e-37 144
MS.gene016426.t1 AT3G04380 28.060 335 170 8 407 690 117 431 6.88e-37 144
MS.gene016426.t1 AT5G47160 41.410 227 122 6 156 378 188 407 6.02e-35 138
MS.gene016426.t1 AT5G47160 41.410 227 122 6 156 378 188 407 6.02e-35 138
MS.gene016426.t1 AT5G47160 41.410 227 122 6 156 378 188 407 6.02e-35 138
MS.gene016426.t1 AT1G04050 28.382 377 183 11 366 690 274 615 2.76e-30 127
MS.gene016426.t1 AT1G04050 28.912 377 181 12 366 690 378 719 3.04e-30 127
MS.gene016426.t1 AT1G04050 28.912 377 181 12 366 690 378 719 3.04e-30 127
MS.gene016426.t1 AT2G23740 30.818 318 168 12 404 693 1081 1374 2.31e-29 125
MS.gene016426.t1 AT2G23740 30.818 318 168 12 404 693 1088 1381 2.52e-29 125
MS.gene016426.t1 AT2G23740 30.818 318 168 12 404 693 1088 1381 2.52e-29 125
MS.gene016426.t1 AT2G23740 30.818 318 168 12 404 693 1088 1381 2.52e-29 125
MS.gene016426.t1 AT5G43990 26.429 420 209 14 321 690 313 682 3.61e-29 124
MS.gene016426.t1 AT5G43990 26.429 420 209 14 321 690 313 682 3.61e-29 124
MS.gene016426.t1 AT5G43990 26.429 420 209 14 321 690 313 682 3.61e-29 124
MS.gene016426.t1 AT5G43990 26.429 420 209 14 321 690 313 682 3.61e-29 124
MS.gene016426.t1 AT5G43990 26.429 420 209 14 321 690 336 705 4.25e-29 124
MS.gene016426.t1 AT5G43990 26.429 420 209 14 321 690 336 705 4.25e-29 124
MS.gene016426.t1 AT5G43990 26.429 420 209 14 321 690 333 702 4.81e-29 124
MS.gene016426.t1 AT5G43990 26.429 420 209 14 321 690 333 702 4.81e-29 124
MS.gene016426.t1 AT5G43990 26.429 420 209 14 321 690 333 702 4.81e-29 124
MS.gene016426.t1 AT5G43990 26.429 420 209 14 321 690 333 702 4.81e-29 124
MS.gene016426.t1 AT5G43990 26.429 420 209 14 321 690 356 725 5.56e-29 123
MS.gene016426.t1 AT5G43990 26.429 420 209 14 321 690 356 725 5.56e-29 123
MS.gene016426.t1 AT5G43990 26.849 365 181 11 376 690 285 613 5.78e-29 123
MS.gene016426.t1 AT5G43990 26.429 420 209 14 321 690 264 633 6.47e-29 123
MS.gene016426.t1 AT5G43990 26.429 420 209 14 321 690 264 633 6.47e-29 123
MS.gene016426.t1 AT5G43990 26.429 420 209 14 321 690 264 633 6.47e-29 123
MS.gene016426.t1 AT5G43990 26.429 420 209 14 321 690 264 633 6.47e-29 123
MS.gene016426.t1 AT2G23740 31.301 246 122 11 404 621 1088 1314 5.94e-20 95.9
MS.gene016426.t1 AT2G23740 31.301 246 122 11 404 621 1088 1314 5.94e-20 95.9
MS.gene016426.t1 AT3G03750 30.396 227 131 8 468 691 145 347 5.99e-19 89.7
MS.gene016426.t1 AT4G30860 28.643 199 102 5 496 694 307 465 2.38e-14 76.6
MS.gene016426.t1 AT3G03750 27.556 225 124 8 468 691 145 331 2.12e-13 72.4
MS.gene016426.t1 AT3G59960 28.333 180 87 6 517 694 111 250 6.18e-11 64.3
MS.gene016426.t1 AT3G59960 28.333 180 87 6 517 694 111 250 6.18e-11 64.3
MS.gene016426.t1 AT3G59960 28.333 180 87 6 517 694 111 250 6.18e-11 64.3

Find 156 sgRNAs with CRISPR-Local

Find 188 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTTATGCTGCTTGGAAAT+TGG 0.240702 8.2:-58271776 MS.gene016426:CDS
CTCTTTCAATCCAAGAATCT+TGG 0.247325 8.2:+58271857 None:intergenic
GAACTCTTGTAGGCCCTTAT+TGG 0.250077 8.2:+58272642 None:intergenic
GCACTAGACCAAAAGGTTTC+GGG 0.260116 8.2:+58271602 None:intergenic
AGCTATATTTCCCACATTCT+TGG 0.262990 8.2:+58271102 None:intergenic
AACATGGATTGAACATGTTT+TGG 0.264294 8.2:+58272834 None:intergenic
GCATCAAGAGGGGTTTCTTC+AGG 0.301685 8.2:+58272735 None:intergenic
TGCACTAGACCAAAAGGTTT+CGG 0.303413 8.2:+58271601 None:intergenic
TGGTGCCTGGGATTGAGATT+GGG 0.314399 8.2:-58272236 MS.gene016426:CDS
GTGGTGCCTGGGATTGAGAT+TGG 0.321695 8.2:-58272237 MS.gene016426:CDS
TTCTTGGCACTTATAATTAG+AGG 0.323045 8.2:+58271118 None:intergenic
TGGAGATAGCGACGATTATT+CGG 0.325609 8.2:-58272589 MS.gene016426:CDS
TTCATCATGTGAACTCTTGT+AGG 0.336128 8.2:+58272632 None:intergenic
GATTATTCGGAAGGGTTTGT+AGG 0.338716 8.2:-58272576 MS.gene016426:CDS
CCATTGGAGGAATATGTCTA+AGG 0.339713 8.2:+58270984 None:intergenic
GGGGTTTCTTCAGGTTCTTT+TGG 0.342799 8.2:+58272744 None:intergenic
ATTGCAAAGAGTTTCTTAAA+AGG 0.342943 8.2:-58272518 MS.gene016426:CDS
TATATAAAATCCAAGATTCT+TGG 0.344747 8.2:-58271867 MS.gene016426:CDS
GCAGAGTTAACATATGATTA+TGG 0.349411 8.2:-58270962 MS.gene016426:CDS
AGAAGAGCGGGCGTGGTGCC+TGG 0.355977 8.2:-58272249 MS.gene016426:CDS
TTTCTGGTGGATACCCTTCT+GGG 0.356149 8.2:-58272812 MS.gene016426:CDS
GCAAAGTGCCGTGGTTTCTT+TGG 0.357611 8.2:-58270869 MS.gene016426:CDS
CTGCTAAAGTGACTCCAATA+AGG 0.365251 8.2:-58272656 MS.gene016426:CDS
GAATTATGAACCTAGCTTAC+TGG 0.368503 8.2:-58271188 MS.gene016426:CDS
AGTAATGCTTTGACTTGTAA+AGG 0.380059 8.2:-58272291 MS.gene016426:CDS
CAGAACAAAGGGTAGAGGTT+GGG 0.385564 8.2:-58271362 MS.gene016426:CDS
TTCTTGCTGACCTCTCCAAT+GGG 0.387936 8.2:-58271711 MS.gene016426:CDS
ACTTGAATGGTTCATAAATA+CGG 0.393021 8.2:+58271212 None:intergenic
TCAAAGAGGTAATCTTGCTT+TGG 0.393398 8.2:-58271983 MS.gene016426:CDS
GAGTATCAAGGATGGATCTA+AGG 0.393584 8.2:-58272139 MS.gene016426:CDS
AGAATACTATTTGCAGTATA+CGG 0.394436 8.2:+58271493 None:intergenic
GGTTCATAATTCCACTTGAA+TGG 0.395912 8.2:+58271199 None:intergenic
ACATCATTGACAAGTGATAC+TGG 0.398710 8.2:+58271676 None:intergenic
TGGATTGAAAGAGGGAAATC+TGG 0.399448 8.2:-58271847 MS.gene016426:CDS
GTTGTTTCGTCAGGTGTATA+TGG 0.410656 8.2:-58272096 MS.gene016426:CDS
GCGTTAAGCGTTGTTTCGTC+AGG 0.419354 8.2:-58272105 MS.gene016426:CDS
GTAATGCTTTGACTTGTAAA+GGG 0.424073 8.2:-58272290 MS.gene016426:CDS
GGAGTCACTTTAGCAGCAAC+AGG 0.425135 8.2:+58272663 None:intergenic
AGAACAAAGGGTAGAGGTTG+GGG 0.428660 8.2:-58271361 MS.gene016426:CDS
ATTCTTGCTGACCTCTCCAA+TGG 0.429575 8.2:-58271712 MS.gene016426:CDS
CACTAAAAGATGATGGTGAT+AGG 0.431343 8.2:-58272431 MS.gene016426:CDS
CGAATGGAAATGTGTCTTGT+GGG 0.460019 8.2:-58272198 MS.gene016426:CDS
GGTTTGACGTATGAGTAAAA+TGG 0.462437 8.2:+58272783 None:intergenic
TGCTAAAGTGACTCCAATAA+GGG 0.462630 8.2:-58272655 MS.gene016426:CDS
CAAGATTCTTGGATTGAAAG+AGG 0.462943 8.2:-58271856 MS.gene016426:CDS
GCATTTCTTTCTCCTTCTAA+AGG 0.463277 8.2:+58270904 None:intergenic
GGGTTTGCATGCTCAATCAA+TGG 0.467421 8.2:-58272178 MS.gene016426:CDS
ATTACCCATGCTGGTCATGC+TGG 0.474621 8.2:-58270938 MS.gene016426:CDS
CTTACATCTTCCAGTAAGCT+AGG 0.477855 8.2:+58271178 None:intergenic
TTACAATTGCAGCTTAAAGA+AGG 0.477858 8.2:+58271577 None:intergenic
CACGAGGAGAAGAGCGGGCG+TGG 0.478218 8.2:-58272256 MS.gene016426:CDS
ATAAAAGTACCAGCACGTAT+AGG 0.483482 8.2:+58271322 None:intergenic
GAAGAGCGGGCGTGGTGCCT+GGG 0.483938 8.2:-58272248 MS.gene016426:CDS
TATTTAAGTATAAGTTGGTA+AGG 0.490370 8.2:-58271816 MS.gene016426:CDS
TGAGCTGCTGCTGCTTTCAC+CGG 0.492787 8.2:+58272693 None:intergenic
CACAGGTGCTAAACTACGTA+AGG 0.494286 8.2:+58272860 None:intergenic
CATGAACAGTTCAAATCACC+TGG 0.499372 8.2:+58271541 None:intergenic
GAGGTAGCAGTGCCTTTAGA+AGG 0.502063 8.2:-58270916 MS.gene016426:CDS
AAAACTCGCGAGCCGGTTGT+TGG 0.502511 8.2:-58272486 MS.gene016426:CDS
ACCTCCAGCATGACCAGCAT+GGG 0.504841 8.2:+58270934 None:intergenic
TTCATGCATTCAAAGAAATG+AGG 0.505419 8.2:-58271524 MS.gene016426:CDS
GCACTTATAATTAGAGGAGA+TGG 0.508609 8.2:+58271124 None:intergenic
GAAGGCTGCACTAGACCAAA+AGG 0.511466 8.2:+58271595 None:intergenic
TGGTATATTTAAGTATAAGT+TGG 0.512381 8.2:-58271821 MS.gene016426:CDS
TTCAACATTCTGATATACCT+TGG 0.513102 8.2:+58271267 None:intergenic
CGGCTACTTTGGCATCAAGA+GGG 0.513820 8.2:+58272724 None:intergenic
CTTGGAAATTGGCTCAAAAG+TGG 0.515222 8.2:-58271765 MS.gene016426:CDS
AAGGTATATCAGAATGTTGA+AGG 0.517616 8.2:-58271265 MS.gene016426:CDS
TGGAATACTTTCAACCCCAT+TGG 0.517944 8.2:+58271696 None:intergenic
TCATATGTTAACTCTGCCAT+TGG 0.520039 8.2:+58270968 None:intergenic
ATGGAAGTGTTCAGAACAAA+GGG 0.520947 8.2:-58271373 MS.gene016426:CDS
TATGTTAACTCTGCCATTGG+AGG 0.521537 8.2:+58270971 None:intergenic
AATAAAACCATTCCTTGTAC+AGG 0.521861 8.2:+58271732 None:intergenic
GAAGAACAAAACTCGCGAGC+CGG 0.522460 8.2:-58272493 MS.gene016426:CDS
TATAAGTTGGTAAGGTTACC+TGG 0.522467 8.2:-58271808 MS.gene016426:CDS
GAACTCGTACCACCAACAAC+CGG 0.528217 8.2:+58272474 None:intergenic
GGAAGGCAGGTTCCTGTACA+AGG 0.528660 8.2:-58271744 MS.gene016426:CDS
TGATAAACGAAAGCGTAGTA+CGG 0.532272 8.2:-58272553 MS.gene016426:CDS
TGTAACACAGCATGTGTCCC+AGG 0.534817 8.2:-58271559 MS.gene016426:CDS
TCGGCTACTTTGGCATCAAG+AGG 0.534991 8.2:+58272723 None:intergenic
GCAGGTTCCTGTACAAGGAA+TGG 0.539532 8.2:-58271739 MS.gene016426:CDS
AATTATAAGTGCCAAGAATG+TGG 0.540601 8.2:-58271113 MS.gene016426:CDS
TCGAATGGAAATGTGTCTTG+TGG 0.542415 8.2:-58272199 MS.gene016426:CDS
TTGGCTCAAAAGTGGAAGGC+AGG 0.546449 8.2:-58271757 MS.gene016426:CDS
CCTTAGACATATTCCTCCAA+TGG 0.547540 8.2:-58270984 MS.gene016426:CDS
GGTTTGCATGCTCAATCAAT+GGG 0.548358 8.2:-58272177 MS.gene016426:CDS
ACTAAAAGATGATGGTGATA+GGG 0.551648 8.2:-58272430 MS.gene016426:CDS
CAAATAGTATTCTAGTGAGT+CGG 0.552747 8.2:-58271483 MS.gene016426:CDS
AAGATTCTTGGATTGAAAGA+GGG 0.554674 8.2:-58271855 MS.gene016426:CDS
ACTCGCGAGCCGGTTGTTGG+TGG 0.555816 8.2:-58272483 MS.gene016426:CDS
TCAGAACAAAGGGTAGAGGT+TGG 0.558625 8.2:-58271363 MS.gene016426:CDS
GGTGCCTGGGATTGAGATTG+GGG 0.558794 8.2:-58272235 MS.gene016426:CDS
GATTATGGAATTACCCATGC+TGG 0.562248 8.2:-58270947 MS.gene016426:CDS
AACCCGACACTAAAAGATGA+TGG 0.564385 8.2:-58272438 MS.gene016426:CDS
GTAGGAAAACACCGACACAT+AGG 0.564832 8.2:+58271436 None:intergenic
AGGGTATCCACCAGAAAACA+TGG 0.570325 8.2:+58272818 None:intergenic
ACATCCCCAATCTCAATCCC+AGG 0.570470 8.2:+58272231 None:intergenic
TACCTCCAGCATGACCAGCA+TGG 0.572482 8.2:+58270933 None:intergenic
TAGGAAAACACCGACACATA+GGG 0.573999 8.2:+58271437 None:intergenic
GATAGCGACGATTATTCGGA+AGG 0.574436 8.2:-58272585 MS.gene016426:CDS
GATGAAGTTAGAGTCATTCG+AGG 0.576279 8.2:-58271940 MS.gene016426:CDS
GGCTACTTTGGCATCAAGAG+GGG 0.578550 8.2:+58272725 None:intergenic
ATTATAAGTGCCAAGAATGT+GGG 0.579471 8.2:-58271112 MS.gene016426:CDS
GAAATGAATCAACAAGGCGA+TGG 0.581588 8.2:-58272609 MS.gene016426:CDS
GTGTTCAGAACAAAGGGTAG+AGG 0.581999 8.2:-58271367 MS.gene016426:CDS
TGACGTTTGATTCAATTCGA+AGG 0.582508 8.2:-58272386 MS.gene016426:CDS
TACTTTCAACCCCATTGGAG+AGG 0.582710 8.2:+58271701 None:intergenic
AAGCCGCTTATTCATGAATG+TGG 0.582827 8.2:-58271460 MS.gene016426:CDS
GTTCCTTCGACTCTTCAAGT+TGG 0.586309 8.2:+58272355 None:intergenic
ACACTGGATCCTATACGTGC+TGG 0.589618 8.2:-58271331 MS.gene016426:CDS
GGTGGTACGAGTTCTTATGT+TGG 0.589976 8.2:-58272465 MS.gene016426:CDS
CATTGGAGGAATATGTCTAA+GGG 0.591612 8.2:+58270985 None:intergenic
AATTGATTATATGAGTATCA+AGG 0.594679 8.2:-58272151 MS.gene016426:CDS
CATGGAAGTGTTCAGAACAA+AGG 0.594814 8.2:-58271374 MS.gene016426:CDS
TTTGGAAGAGGAATGTGATG+GGG 0.595616 8.2:+58272762 None:intergenic
CAATGATGTCGATGATGAGA+AGG 0.596174 8.2:-58271662 MS.gene016426:CDS
GACTGGTTTAAAACAACACA+TGG 0.599479 8.2:-58271392 MS.gene016426:CDS
AGAAGTTATTAACAGAGCCA+AGG 0.601057 8.2:-58271284 MS.gene016426:CDS
TCATGCATTCAAAGAAATGA+GGG 0.603338 8.2:-58271523 MS.gene016426:CDS
CGTTTGATTCAATTCGAAGG+AGG 0.603429 8.2:-58272383 MS.gene016426:CDS
ACTAACACGAGGAGAAGAGC+GGG 0.604705 8.2:-58272261 MS.gene016426:CDS
TAAAATGGAGGAAACCCAGA+AGG 0.605934 8.2:+58272798 None:intergenic
GTATTTATGAACCATTCAAG+TGG 0.607961 8.2:-58271210 MS.gene016426:CDS
GAAATTGGCTCAAAAGTGGA+AGG 0.609566 8.2:-58271761 MS.gene016426:CDS
AGGAGAAAGAAATGCTTGTG+TGG 0.611149 8.2:-58270896 MS.gene016426:CDS
GAACAAAGGGTAGAGGTTGG+GGG 0.611366 8.2:-58271360 MS.gene016426:CDS
GATTATATGAGTATCAAGGA+TGG 0.613333 8.2:-58272147 MS.gene016426:CDS
AACTAACACGAGGAGAAGAG+CGG 0.618441 8.2:-58272262 MS.gene016426:CDS
ATAGCGACGATTATTCGGAA+GGG 0.618833 8.2:-58272584 MS.gene016426:CDS
GGAGAAAGAAATGCTTGTGT+GGG 0.619249 8.2:-58270895 MS.gene016426:CDS
ATGCCAACTTGAAGAGTCGA+AGG 0.621780 8.2:-58272358 MS.gene016426:CDS
ACCCATGCTGGTCATGCTGG+AGG 0.621845 8.2:-58270935 MS.gene016426:CDS
TTGACGTATGAGTAAAATGG+AGG 0.626397 8.2:+58272786 None:intergenic
TCTTGCTGACCTCTCCAATG+GGG 0.629627 8.2:-58271710 MS.gene016426:CDS
GAAAGAGGGAAATCTGGCGG+TGG 0.632493 8.2:-58271841 MS.gene016426:CDS
AAGTTCAAATGTATGTAGTG+AGG 0.636973 8.2:-58271158 MS.gene016426:CDS
GGGCCACATTCATGAATAAG+CGG 0.645886 8.2:+58271457 None:intergenic
TTGGCAGCCAGTCTTATATG+CGG 0.646377 8.2:-58271044 MS.gene016426:CDS
TATCAAGGATGGATCTAAGG+AGG 0.648003 8.2:-58272136 MS.gene016426:CDS
TGCACTTGCTATCAAGCGTG+CGG 0.648738 8.2:-58272325 MS.gene016426:CDS
ACTGATCAGAAGCTTCAAAG+AGG 0.649359 8.2:-58271997 MS.gene016426:CDS
TTGCATGCTCAATCAATGGG+TGG 0.651570 8.2:-58272174 MS.gene016426:CDS
TGTATATGGTGATGATACAG+AGG 0.665371 8.2:-58272082 MS.gene016426:CDS
TGTGGGTCAGCAAAGTGCCG+TGG 0.671789 8.2:-58270878 MS.gene016426:CDS
ATGAATGTGGCCCTATGTGT+CGG 0.674340 8.2:-58271447 MS.gene016426:CDS
CAAAGTAGCCGAGAAAACGC+CGG 0.676869 8.2:-58272712 MS.gene016426:CDS
AAAATGGAGGAAACCCAGAA+GGG 0.679014 8.2:+58272799 None:intergenic
ACAGGTGCTAAACTACGTAA+GGG 0.679266 8.2:+58272861 None:intergenic
TGGATCTAAGGAGGATACTG+TGG 0.679943 8.2:-58272127 MS.gene016426:CDS
AATGATGTCGATGATGAGAA+GGG 0.683211 8.2:-58271661 MS.gene016426:CDS
ATTGTTAACCAAAGAAACCA+CGG 0.691606 8.2:+58270861 None:intergenic
GATGAAGAAATGAATCAACA+AGG 0.703890 8.2:-58272615 MS.gene016426:CDS
ATTGAAAGAGGGAAATCTGG+CGG 0.710427 8.2:-58271844 MS.gene016426:CDS
ATGAACAGTTCAAATCACCT+GGG 0.723585 8.2:+58271542 None:intergenic
AAGGGTTTAAAACTAACACG+AGG 0.770459 8.2:-58272272 MS.gene016426:CDS
CTTTGGACAGAAGTGCACAG+CGG 0.772147 8.2:-58271966 MS.gene016426:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAATGTTTTAATTTATAG+TGG - chr8.2:58271735-58271754 MS.gene016426:CDS 10.0%
!! AATTGATTATATGAGTATCA+AGG - chr8.2:58271641-58271660 MS.gene016426:CDS 20.0%
!! TATATAAAATCCAAGATTCT+TGG - chr8.2:58271925-58271944 MS.gene016426:CDS 20.0%
!! TCAAAAATCTATATGTATGA+TGG - chr8.2:58271900-58271919 MS.gene016426:CDS 20.0%
!! TGGTATATTTAAGTATAAGT+TGG - chr8.2:58271971-58271990 MS.gene016426:CDS 20.0%
!!! TATTTAAGTATAAGTTGGTA+AGG - chr8.2:58271976-58271995 MS.gene016426:CDS 20.0%
! AAAAAATGCAATGTGGATAA+AGG + chr8.2:58272786-58272805 None:intergenic 25.0%
! ACTTGAATGGTTCATAAATA+CGG + chr8.2:58272583-58272602 None:intergenic 25.0%
! AGAATACTATTTGCAGTATA+CGG + chr8.2:58272302-58272321 None:intergenic 25.0%
! ATTGCAAAGAGTTTCTTAAA+AGG - chr8.2:58271274-58271293 MS.gene016426:CDS 25.0%
!! ATTTTTGAACTTCTATTCAC+AGG + chr8.2:58271888-58271907 None:intergenic 25.0%
!!! GTTTTAATTTATAGTGGTCA+GGG - chr8.2:58271741-58271760 MS.gene016426:CDS 25.0%
!!! TGTTTTAATTTATAGTGGTC+AGG - chr8.2:58271740-58271759 MS.gene016426:CDS 25.0%
AAAAAATTGCTTATGCTGCT+TGG - chr8.2:58272009-58272028 MS.gene016426:CDS 30.0%
AAGATTCTTGGATTGAAAGA+GGG - chr8.2:58271937-58271956 MS.gene016426:CDS 30.0%
AAGGTATATCAGAATGTTGA+AGG - chr8.2:58272527-58272546 MS.gene016426:CDS 30.0%
AAGTTCAAATGTATGTAGTG+AGG - chr8.2:58272634-58272653 MS.gene016426:CDS 30.0%
AATAAAACCATTCCTTGTAC+AGG + chr8.2:58272063-58272082 None:intergenic 30.0%
AATTATAAGTGCCAAGAATG+TGG - chr8.2:58272679-58272698 MS.gene016426:CDS 30.0%
ATTATAAGTGCCAAGAATGT+GGG - chr8.2:58272680-58272699 MS.gene016426:CDS 30.0%
CAAATAGTATTCTAGTGAGT+CGG - chr8.2:58272309-58272328 MS.gene016426:CDS 30.0%
GATGAAGAAATGAATCAACA+AGG - chr8.2:58271177-58271196 MS.gene016426:CDS 30.0%
GATTATATGAGTATCAAGGA+TGG - chr8.2:58271645-58271664 MS.gene016426:CDS 30.0%
GCAGAGTTAACATATGATTA+TGG - chr8.2:58272830-58272849 MS.gene016426:CDS 30.0%
GTATTTATGAACCATTCAAG+TGG - chr8.2:58272582-58272601 MS.gene016426:CDS 30.0%
GTGAAATAAGTGAAAAAAGC+AGG + chr8.2:58272158-58272177 None:intergenic 30.0%
TCATGCATTCAAAGAAATGA+GGG - chr8.2:58272269-58272288 MS.gene016426:CDS 30.0%
TTACAATTGCAGCTTAAAGA+AGG + chr8.2:58272218-58272237 None:intergenic 30.0%
TTCAACATTCTGATATACCT+TGG + chr8.2:58272528-58272547 None:intergenic 30.0%
TTCATGCATTCAAAGAAATG+AGG - chr8.2:58272268-58272287 MS.gene016426:CDS 30.0%
TTCTTGGCACTTATAATTAG+AGG + chr8.2:58272677-58272696 None:intergenic 30.0%
! ACTAAAAGATGATGGTGATA+GGG - chr8.2:58271362-58271381 MS.gene016426:CDS 30.0%
! TTATTTTCCGCATATAAGAC+TGG + chr8.2:58272758-58272777 None:intergenic 30.0%
!! AACATGGATTGAACATGTTT+TGG + chr8.2:58270961-58270980 None:intergenic 30.0%
!! ACTTTTATTTGTGAGTATGC+AGG - chr8.2:58272485-58272504 MS.gene016426:CDS 30.0%
!! AGTAATGCTTTGACTTGTAA+AGG - chr8.2:58271501-58271520 MS.gene016426:CDS 30.0%
!! GTAATGCTTTGACTTGTAAA+GGG - chr8.2:58271502-58271521 MS.gene016426:CDS 30.0%
!!! GGATGTTTTCTTTTTTCGAA+TGG - chr8.2:58271578-58271597 MS.gene016426:CDS 30.0%
AAAAATCGAGTATCACAGAC+TGG - chr8.2:58272383-58272402 MS.gene016426:CDS 35.0%
AATGATGTCGATGATGAGAA+GGG - chr8.2:58272131-58272150 MS.gene016426:CDS 35.0%
ACATCATTGACAAGTGATAC+TGG + chr8.2:58272119-58272138 None:intergenic 35.0%
AGAAGTTATTAACAGAGCCA+AGG - chr8.2:58272508-58272527 MS.gene016426:CDS 35.0%
AGCTATATTTCCCACATTCT+TGG + chr8.2:58272693-58272712 None:intergenic 35.0%
ATGAACAGTTCAAATCACCT+GGG + chr8.2:58272253-58272272 None:intergenic 35.0%
CAAGATTCTTGGATTGAAAG+AGG - chr8.2:58271936-58271955 MS.gene016426:CDS 35.0%
CATTGGAGGAATATGTCTAA+GGG + chr8.2:58272810-58272829 None:intergenic 35.0%
CTCTTTCAATCCAAGAATCT+TGG + chr8.2:58271938-58271957 None:intergenic 35.0%
GAATTATGAACCTAGCTTAC+TGG - chr8.2:58272604-58272623 MS.gene016426:CDS 35.0%
GCACTTATAATTAGAGGAGA+TGG + chr8.2:58272671-58272690 None:intergenic 35.0%
GCATTTCTTTCTCCTTCTAA+AGG + chr8.2:58272891-58272910 None:intergenic 35.0%
GGTTCATAATTCCACTTGAA+TGG + chr8.2:58272596-58272615 None:intergenic 35.0%
GGTTTGACGTATGAGTAAAA+TGG + chr8.2:58271012-58271031 None:intergenic 35.0%
TAAGGGCAAAAAATGCAATG+TGG + chr8.2:58272793-58272812 None:intergenic 35.0%
TCAAAGAGGTAATCTTGCTT+TGG - chr8.2:58271809-58271828 MS.gene016426:CDS 35.0%
TCATATGTTAACTCTGCCAT+TGG + chr8.2:58272827-58272846 None:intergenic 35.0%
TGACGTTTGATTCAATTCGA+AGG - chr8.2:58271406-58271425 MS.gene016426:CDS 35.0%
TGCTAAAGTGACTCCAATAA+GGG - chr8.2:58271137-58271156 MS.gene016426:CDS 35.0%
TTCATCATGTGAACTCTTGT+AGG + chr8.2:58271163-58271182 None:intergenic 35.0%
TTGACGTATGAGTAAAATGG+AGG + chr8.2:58271009-58271028 None:intergenic 35.0%
! AAGGGTTTAAAACTAACACG+AGG - chr8.2:58271520-58271539 MS.gene016426:CDS 35.0%
! CACTAAAAGATGATGGTGAT+AGG - chr8.2:58271361-58271380 MS.gene016426:CDS 35.0%
! CATGTTCAATCCATGTTTTC+TGG - chr8.2:58270964-58270983 MS.gene016426:CDS 35.0%
! TCACCATCATCTTTTAGTGT+CGG + chr8.2:58271360-58271379 None:intergenic 35.0%
! TGATAAACGAAAGCGTAGTA+CGG - chr8.2:58271239-58271258 MS.gene016426:CDS 35.0%
! TGTATATGGTGATGATACAG+AGG - chr8.2:58271710-58271729 MS.gene016426:CDS 35.0%
!! ATAAAAGTACCAGCACGTAT+AGG + chr8.2:58272473-58272492 None:intergenic 35.0%
!! ATGGAAGTGTTCAGAACAAA+GGG - chr8.2:58272419-58272438 MS.gene016426:CDS 35.0%
!! GACTGGTTTAAAACAACACA+TGG - chr8.2:58272400-58272419 MS.gene016426:CDS 35.0%
!! TATAAGTTGGTAAGGTTACC+TGG - chr8.2:58271984-58272003 MS.gene016426:CDS 35.0%
!! TTTTGGAAGAGGAATGTGAT+GGG + chr8.2:58271034-58271053 None:intergenic 35.0%
!!! GCATAAGCAATTTTTTGACC+AGG + chr8.2:58272005-58272024 None:intergenic 35.0%
AAAATGGAGGAAACCCAGAA+GGG + chr8.2:58270996-58271015 None:intergenic 40.0%
AACCCGACACTAAAAGATGA+TGG - chr8.2:58271354-58271373 MS.gene016426:CDS 40.0%
AAGCCGCTTATTCATGAATG+TGG - chr8.2:58272332-58272351 MS.gene016426:CDS 40.0%
ACAGGTGCTAAACTACGTAA+GGG + chr8.2:58270934-58270953 None:intergenic 40.0%
ACTGATCAGAAGCTTCAAAG+AGG - chr8.2:58271795-58271814 MS.gene016426:CDS 40.0%
ACTGGCTGCCAAAAAACATT+TGG + chr8.2:58272740-58272759 None:intergenic 40.0%
AGGAGAAAGAAATGCTTGTG+TGG - chr8.2:58272896-58272915 MS.gene016426:CDS 40.0%
ATAGCGACGATTATTCGGAA+GGG - chr8.2:58271208-58271227 MS.gene016426:CDS 40.0%
ATTGAAAGAGGGAAATCTGG+CGG - chr8.2:58271948-58271967 MS.gene016426:CDS 40.0%
CAATGATGTCGATGATGAGA+AGG - chr8.2:58272130-58272149 MS.gene016426:CDS 40.0%
CATGAACAGTTCAAATCACC+TGG + chr8.2:58272254-58272273 None:intergenic 40.0%
CCATTGGAGGAATATGTCTA+AGG + chr8.2:58272811-58272830 None:intergenic 40.0%
CCTTAGACATATTCCTCCAA+TGG - chr8.2:58272808-58272827 MS.gene016426:CDS 40.0%
CGAATGGAAATGTGTCTTGT+GGG - chr8.2:58271594-58271613 MS.gene016426:CDS 40.0%
CGTTTGATTCAATTCGAAGG+AGG - chr8.2:58271409-58271428 MS.gene016426:CDS 40.0%
CTGCTAAAGTGACTCCAATA+AGG - chr8.2:58271136-58271155 MS.gene016426:CDS 40.0%
CTGGCTGCCAAAAAACATTT+GGG + chr8.2:58272739-58272758 None:intergenic 40.0%
CTTACATCTTCCAGTAAGCT+AGG + chr8.2:58272617-58272636 None:intergenic 40.0%
GAAATGAATCAACAAGGCGA+TGG - chr8.2:58271183-58271202 MS.gene016426:CDS 40.0%
GAGTATCAAGGATGGATCTA+AGG - chr8.2:58271653-58271672 MS.gene016426:CDS 40.0%
GATGAAGTTAGAGTCATTCG+AGG - chr8.2:58271852-58271871 MS.gene016426:CDS 40.0%
GATTATGGAATTACCCATGC+TGG - chr8.2:58272845-58272864 MS.gene016426:CDS 40.0%
GATTATTCGGAAGGGTTTGT+AGG - chr8.2:58271216-58271235 MS.gene016426:CDS 40.0%
GGAGAAAGAAATGCTTGTGT+GGG - chr8.2:58272897-58272916 MS.gene016426:CDS 40.0%
GGTTTGCATGCTCAATCAAT+GGG - chr8.2:58271615-58271634 MS.gene016426:CDS 40.0%
TAAAATGGAGGAAACCCAGA+AGG + chr8.2:58270997-58271016 None:intergenic 40.0%
TAGGAAAACACCGACACATA+GGG + chr8.2:58272358-58272377 None:intergenic 40.0%
TATCAAGGATGGATCTAAGG+AGG - chr8.2:58271656-58271675 MS.gene016426:CDS 40.0%
TATGTTAACTCTGCCATTGG+AGG + chr8.2:58272824-58272843 None:intergenic 40.0%
TCGAATGGAAATGTGTCTTG+TGG - chr8.2:58271593-58271612 MS.gene016426:CDS 40.0%
TGCACTAGACCAAAAGGTTT+CGG + chr8.2:58272194-58272213 None:intergenic 40.0%
TGGAATACTTTCAACCCCAT+TGG + chr8.2:58272099-58272118 None:intergenic 40.0%
TGGAGATAGCGACGATTATT+CGG - chr8.2:58271203-58271222 MS.gene016426:CDS 40.0%
TGGATTGAAAGAGGGAAATC+TGG - chr8.2:58271945-58271964 MS.gene016426:CDS 40.0%
TGGCTGCCAAAAAACATTTG+GGG + chr8.2:58272738-58272757 None:intergenic 40.0%
TTTGGAAGAGGAATGTGATG+GGG + chr8.2:58271033-58271052 None:intergenic 40.0%
! CACCATCATCTTTTAGTGTC+GGG + chr8.2:58271359-58271378 None:intergenic 40.0%
! CTCAAAAACCCGAAACCTTT+TGG - chr8.2:58272182-58272201 MS.gene016426:CDS 40.0%
! CTGTGATACTCGATTTTTGC+AGG + chr8.2:58272381-58272400 None:intergenic 40.0%
! CTTGGAAATTGGCTCAAAAG+TGG - chr8.2:58272027-58272046 MS.gene016426:CDS 40.0%
! GAAATTGGCTCAAAAGTGGA+AGG - chr8.2:58272031-58272050 MS.gene016426:CDS 40.0%
! GATACTCGATTTTTGCAGGT+AGG + chr8.2:58272377-58272396 None:intergenic 40.0%
! GTTCAATCCATGTTTTCTGG+TGG - chr8.2:58270967-58270986 MS.gene016426:CDS 40.0%
! GTTGTTTCGTCAGGTGTATA+TGG - chr8.2:58271696-58271715 MS.gene016426:CDS 40.0%
! TGCTTATGCTGCTTGGAAAT+TGG - chr8.2:58272016-58272035 MS.gene016426:CDS 40.0%
!! CATGGAAGTGTTCAGAACAA+AGG - chr8.2:58272418-58272437 MS.gene016426:CDS 40.0%
!! CTTTTGGAAGAGGAATGTGA+TGG + chr8.2:58271035-58271054 None:intergenic 40.0%
!! TCTTCAGGTTCTTTTGGAAG+AGG + chr8.2:58271045-58271064 None:intergenic 40.0%
!!! GTTGCTCCCCAAATGTTTTT+TGG - chr8.2:58272729-58272748 MS.gene016426:CDS 40.0%
!!! TGAACATGTTTTGGCAACAC+AGG + chr8.2:58270952-58270971 None:intergenic 40.0%
AACTAACACGAGGAGAAGAG+CGG - chr8.2:58271530-58271549 MS.gene016426:CDS 45.0%
AGAACAAAGGGTAGAGGTTG+GGG - chr8.2:58272431-58272450 MS.gene016426:CDS 45.0%
ATGAATGTGGCCCTATGTGT+CGG - chr8.2:58272345-58272364 MS.gene016426:CDS 45.0%
ATGCCAACTTGAAGAGTCGA+AGG - chr8.2:58271434-58271453 MS.gene016426:CDS 45.0%
ATTCTTGCTGACCTCTCCAA+TGG - chr8.2:58272080-58272099 MS.gene016426:CDS 45.0%
CACAGGTGCTAAACTACGTA+AGG + chr8.2:58270935-58270954 None:intergenic 45.0%
CAGAACAAAGGGTAGAGGTT+GGG - chr8.2:58272430-58272449 MS.gene016426:CDS 45.0%
GAACTCTTGTAGGCCCTTAT+TGG + chr8.2:58271153-58271172 None:intergenic 45.0%
GATAGCGACGATTATTCGGA+AGG - chr8.2:58271207-58271226 MS.gene016426:CDS 45.0%
GCACTAGACCAAAAGGTTTC+GGG + chr8.2:58272193-58272212 None:intergenic 45.0%
GGGCCACATTCATGAATAAG+CGG + chr8.2:58272338-58272357 None:intergenic 45.0%
GGGTTTGCATGCTCAATCAA+TGG - chr8.2:58271614-58271633 MS.gene016426:CDS 45.0%
GGTGGTACGAGTTCTTATGT+TGG - chr8.2:58271327-58271346 MS.gene016426:CDS 45.0%
GTAGGAAAACACCGACACAT+AGG + chr8.2:58272359-58272378 None:intergenic 45.0%
GTGTTCAGAACAAAGGGTAG+AGG - chr8.2:58272425-58272444 MS.gene016426:CDS 45.0%
GTTCCTTCGACTCTTCAAGT+TGG + chr8.2:58271440-58271459 None:intergenic 45.0%
TACTTTCAACCCCATTGGAG+AGG + chr8.2:58272094-58272113 None:intergenic 45.0%
TCAGAACAAAGGGTAGAGGT+TGG - chr8.2:58272429-58272448 MS.gene016426:CDS 45.0%
TGGATCTAAGGAGGATACTG+TGG - chr8.2:58271665-58271684 MS.gene016426:CDS 45.0%
TTCTTGCTGACCTCTCCAAT+GGG - chr8.2:58272081-58272100 MS.gene016426:CDS 45.0%
TTGCATGCTCAATCAATGGG+TGG - chr8.2:58271618-58271637 MS.gene016426:CDS 45.0%
! AGGGTATCCACCAGAAAACA+TGG + chr8.2:58270977-58270996 None:intergenic 45.0%
! TTGGCAGCCAGTCTTATATG+CGG - chr8.2:58272748-58272767 MS.gene016426:CDS 45.0%
! TTTCTGGTGGATACCCTTCT+GGG - chr8.2:58270980-58270999 MS.gene016426:CDS 45.0%
!! GGGGTTTCTTCAGGTTCTTT+TGG + chr8.2:58271051-58271070 None:intergenic 45.0%
!! TTTTCTGGTGGATACCCTTC+TGG - chr8.2:58270979-58270998 MS.gene016426:CDS 45.0%
ACACTGGATCCTATACGTGC+TGG - chr8.2:58272461-58272480 MS.gene016426:CDS 50.0%
ACATCCCCAATCTCAATCCC+AGG + chr8.2:58271564-58271583 None:intergenic 50.0%
ACTAACACGAGGAGAAGAGC+GGG - chr8.2:58271531-58271550 MS.gene016426:CDS 50.0%
ATTACCCATGCTGGTCATGC+TGG - chr8.2:58272854-58272873 MS.gene016426:CDS 50.0%
CAAAGTAGCCGAGAAAACGC+CGG - chr8.2:58271080-58271099 MS.gene016426:CDS 50.0%
GAACAAAGGGTAGAGGTTGG+GGG - chr8.2:58272432-58272451 MS.gene016426:CDS 50.0%
GAACTCGTACCACCAACAAC+CGG + chr8.2:58271321-58271340 None:intergenic 50.0%
GAAGAACAAAACTCGCGAGC+CGG - chr8.2:58271299-58271318 MS.gene016426:CDS 50.0%
GAAGGCTGCACTAGACCAAA+AGG + chr8.2:58272200-58272219 None:intergenic 50.0%
GAGGTAGCAGTGCCTTTAGA+AGG - chr8.2:58272876-58272895 MS.gene016426:CDS 50.0%
GCAGGTTCCTGTACAAGGAA+TGG - chr8.2:58272053-58272072 MS.gene016426:CDS 50.0%
GCATCAAGAGGGGTTTCTTC+AGG + chr8.2:58271060-58271079 None:intergenic 50.0%
TCTTGCTGACCTCTCCAATG+GGG - chr8.2:58272082-58272101 MS.gene016426:CDS 50.0%
TGGTGCCTGGGATTGAGATT+GGG - chr8.2:58271556-58271575 MS.gene016426:CDS 50.0%
TGTAACACAGCATGTGTCCC+AGG - chr8.2:58272233-58272252 MS.gene016426:CDS 50.0%
TTGGCTCAAAAGTGGAAGGC+AGG - chr8.2:58272035-58272054 MS.gene016426:CDS 50.0%
! CGGCTACTTTGGCATCAAGA+GGG + chr8.2:58271071-58271090 None:intergenic 50.0%
! CTTTGGACAGAAGTGCACAG+CGG - chr8.2:58271826-58271845 MS.gene016426:CDS 50.0%
! GCGTTAAGCGTTGTTTCGTC+AGG - chr8.2:58271687-58271706 MS.gene016426:CDS 50.0%
! GGAGTCACTTTAGCAGCAAC+AGG + chr8.2:58271132-58271151 None:intergenic 50.0%
! GGCTACTTTGGCATCAAGAG+GGG + chr8.2:58271070-58271089 None:intergenic 50.0%
! TCGGCTACTTTGGCATCAAG+AGG + chr8.2:58271072-58271091 None:intergenic 50.0%
! TGCTTTCACCGGCGTTTTCT+CGG + chr8.2:58271091-58271110 None:intergenic 50.0%
!! GCAAAGTGCCGTGGTTTCTT+TGG - chr8.2:58272923-58272942 MS.gene016426:CDS 50.0%
!! TGCACTTGCTATCAAGCGTG+CGG - chr8.2:58271467-58271486 MS.gene016426:CDS 50.0%
AAAACTCGCGAGCCGGTTGT+TGG - chr8.2:58271306-58271325 MS.gene016426:CDS 55.0%
ACCTCCAGCATGACCAGCAT+GGG + chr8.2:58272861-58272880 None:intergenic 55.0%
GAAAGAGGGAAATCTGGCGG+TGG - chr8.2:58271951-58271970 MS.gene016426:CDS 55.0%
GGAAGGCAGGTTCCTGTACA+AGG - chr8.2:58272048-58272067 MS.gene016426:CDS 55.0%
GGTGCCTGGGATTGAGATTG+GGG - chr8.2:58271557-58271576 MS.gene016426:CDS 55.0%
GTGGTGCCTGGGATTGAGAT+TGG - chr8.2:58271555-58271574 MS.gene016426:CDS 55.0%
TACCTCCAGCATGACCAGCA+TGG + chr8.2:58272862-58272881 None:intergenic 55.0%
! CGGCGTTTTCTCGGCTACTT+TGG + chr8.2:58271082-58271101 None:intergenic 55.0%
!! TGAGCTGCTGCTGCTTTCAC+CGG + chr8.2:58271102-58271121 None:intergenic 55.0%
ACCCATGCTGGTCATGCTGG+AGG - chr8.2:58272857-58272876 MS.gene016426:CDS 60.0%
AGGTTGGGGGCTTCGAACAC+TGG - chr8.2:58272445-58272464 MS.gene016426:CDS 60.0%
!! TGTGGGTCAGCAAAGTGCCG+TGG - chr8.2:58272914-58272933 MS.gene016426:CDS 60.0%
ACTCGCGAGCCGGTTGTTGG+TGG - chr8.2:58271309-58271328 MS.gene016426:CDS 65.0%
AGAAGAGCGGGCGTGGTGCC+TGG - chr8.2:58271543-58271562 MS.gene016426:CDS 70.0%
CACGAGGAGAAGAGCGGGCG+TGG - chr8.2:58271536-58271555 MS.gene016426:CDS 70.0%
GAAGAGCGGGCGTGGTGCCT+GGG - chr8.2:58271544-58271563 MS.gene016426:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 58270865 58272949 58270865 ID=MS.gene016426
chr8.2 mRNA 58270865 58272949 58270865 ID=MS.gene016426.t1;Parent=MS.gene016426
chr8.2 exon 58270865 58272949 58270865 ID=MS.gene016426.t1.exon1;Parent=MS.gene016426.t1
chr8.2 CDS 58270865 58272949 58270865 ID=cds.MS.gene016426.t1;Parent=MS.gene016426.t1
Gene Sequence

>MS.gene016426

ATGGAAGAACACAACAACAACACTGCTTCAGATTCATTTGACAAATCTAAGATTGTTGAAGTCAAACCCTTACGTAGTTTAGCACCTGTGTTGCCAAAACATGTTCAATCCATGTTTTCTGGTGGATACCCTTCTGGGTTTCCTCCATTTTACTCATACGTCAAACCCCATCACATTCCTCTTCCAAAAGAACCTGAAGAAACCCCTCTTGATGCCAAAGTAGCCGAGAAAACGCCGGTGAAAGCAGCAGCAGCTCATGACACTCCTGTTGCTGCTAAAGTGACTCCAATAAGGGCCTACAAGAGTTCACATGATGAAGAAATGAATCAACAAGGCGATGGAGATAGCGACGATTATTCGGAAGGGTTTGTAGGTGATAAACGAAAGCGTAGTACGGATAATATTGAGAATTGCAAAGAGTTTCTTAAAAGGAAGAAGAACAAAACTCGCGAGCCGGTTGTTGGTGGTACGAGTTCTTATGTTGGTGTTAACCCGACACTAAAAGATGATGGTGATAGGGAGTCAGTTAATCATGTGCTTATGACGTTTGATTCAATTCGAAGGAGGCTATGCCAACTTGAAGAGTCGAAGGAACTAAACAATGCACTTGCTATCAAGCGTGCGGATCTAAGAGCAAGTAATGCTTTGACTTGTAAAGGGTTTAAAACTAACACGAGGAGAAGAGCGGGCGTGGTGCCTGGGATTGAGATTGGGGATGTTTTCTTTTTTCGAATGGAAATGTGTCTTGTGGGTTTGCATGCTCAATCAATGGGTGGAATTGATTATATGAGTATCAAGGATGGATCTAAGGAGGATACTGTGGCGTTAAGCGTTGTTTCGTCAGGTGTATATGGTGATGATACAGAGGATAATAATGTTTTAATTTATAGTGGTCAGGGTGAGAATTTCAACAAGAAAGATAAACATGTGACTGATCAGAAGCTTCAAAGAGGTAATCTTGCTTTGGACAGAAGTGCACAGCGGCACGATGAAGTTAGAGTCATTCGAGGCGTGAGAGATCCTGTGAATAGAAGTTCAAAAATCTATATGTATGATGGTTTATATAAAATCCAAGATTCTTGGATTGAAAGAGGGAAATCTGGCGGTGGTATATTTAAGTATAAGTTGGTAAGGTTACCTGGTCAAAAAATTGCTTATGCTGCTTGGAAATTGGCTCAAAAGTGGAAGGCAGGTTCCTGTACAAGGAATGGTTTTATTCTTGCTGACCTCTCCAATGGGGTTGAAAGTATTCCAGTATCACTTGTCAATGATGTCGATGATGAGAAGGGTCCTGCTTTTTTCACTTATTTCACGTCTCTCAAAAACCCGAAACCTTTTGGTCTAGTGCAGCCTTCTTTAAGCTGCAATTGTAACACAGCATGTGTCCCAGGTGATTTGAACTGTTCATGCATTCAAAGAAATGAGGGTGATTTTCCGTATACTGCAAATAGTATTCTAGTGAGTCGGAAGCCGCTTATTCATGAATGTGGCCCTATGTGTCGGTGTTTTCCTACCTGCAAAAATCGAGTATCACAGACTGGTTTAAAACAACACATGGAAGTGTTCAGAACAAAGGGTAGAGGTTGGGGGCTTCGAACACTGGATCCTATACGTGCTGGTACTTTTATTTGTGAGTATGCAGGAGAAGTTATTAACAGAGCCAAGGTATATCAGAATGTTGAAGGAGATAATGACGAATATGTTTTTGATACAAGCCGTATTTATGAACCATTCAAGTGGAATTATGAACCTAGCTTACTGGAAGATGTAAGTTCAAATGTATGTAGTGAGGATTATACTATACCATCTCCTCTAATTATAAGTGCCAAGAATGTGGGAAATATAGCTAGATTCATGAATCATAGTTGCTCCCCAAATGTTTTTTGGCAGCCAGTCTTATATGCGGAAAATAATCAATCCTTTATCCACATTGCATTTTTTGCCCTTAGACATATTCCTCCAATGGCAGAGTTAACATATGATTATGGAATTACCCATGCTGGTCATGCTGGAGGTAGCAGTGCCTTTAGAAGGAGAAAGAAATGCTTGTGTGGGTCAGCAAAGTGCCGTGGTTTCTTTGGTTAA
Protein sequence

>MS.gene016426.t1

MEEHNNNTASDSFDKSKIVEVKPLRSLAPVLPKHVQSMFSGGYPSGFPPFYSYVKPHHIPLPKEPEETPLDAKVAEKTPVKAAAAHDTPVAAKVTPIRAYKSSHDEEMNQQGDGDSDDYSEGFVGDKRKRSTDNIENCKEFLKRKKNKTREPVVGGTSSYVGVNPTLKDDGDRESVNHVLMTFDSIRRRLCQLEESKELNNALAIKRADLRASNALTCKGFKTNTRRRAGVVPGIEIGDVFFFRMEMCLVGLHAQSMGGIDYMSIKDGSKEDTVALSVVSSGVYGDDTEDNNVLIYSGQGENFNKKDKHVTDQKLQRGNLALDRSAQRHDEVRVIRGVRDPVNRSSKIYMYDGLYKIQDSWIERGKSGGGIFKYKLVRLPGQKIAYAAWKLAQKWKAGSCTRNGFILADLSNGVESIPVSLVNDVDDEKGPAFFTYFTSLKNPKPFGLVQPSLSCNCNTACVPGDLNCSCIQRNEGDFPYTANSILVSRKPLIHECGPMCRCFPTCKNRVSQTGLKQHMEVFRTKGRGWGLRTLDPIRAGTFICEYAGEVINRAKVYQNVEGDNDEYVFDTSRIYEPFKWNYEPSLLEDVSSNVCSEDYTIPSPLIISAKNVGNIARFMNHSCSPNVFWQPVLYAENNQSFIHIAFFALRHIPPMAELTYDYGITHAGHAGGSSAFRRRKKCLCGSAKCRGFFG