AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene063902

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063902.t1 MTR_8g042750 96.647 686 23 0 12 697 3 688 0.0 1391
MS.gene063902.t1 MTR_3g011440 60.116 687 233 8 13 696 15 663 0.0 847
MS.gene063902.t1 MTR_7g088370 45.604 728 334 13 5 696 3 704 0.0 616
MS.gene063902.t1 MTR_5g013420 42.256 523 285 11 176 696 581 1088 3.15e-126 401
MS.gene063902.t1 MTR_5g013420 42.226 521 284 11 176 694 581 1086 4.46e-125 398
MS.gene063902.t1 MTR_4g010830 38.850 574 316 14 131 694 429 977 8.79e-115 369
MS.gene063902.t1 MTR_8g070070 41.333 450 246 12 229 668 317 758 1.60e-105 338
MS.gene063902.t1 MTR_1g035420 39.960 503 279 14 176 668 158 647 1.10e-104 333
MS.gene063902.t1 MTR_8g070075 40.089 449 251 10 229 667 310 750 9.22e-104 333
MS.gene063902.t1 MTR_8g071030 39.741 463 251 9 221 668 289 738 1.07e-102 331
MS.gene063902.t1 MTR_4g010550 38.990 495 252 14 203 694 14 461 1.67e-101 319
MS.gene063902.t1 MTR_1g035400 36.822 516 286 16 176 668 68 566 2.56e-92 298
MS.gene063902.t1 MTR_6g044690 36.571 525 280 17 176 667 60 564 4.39e-90 292
MS.gene063902.t1 MTR_0376s0030 36.207 522 290 16 173 666 55 561 1.53e-86 283
MS.gene063902.t1 MTR_6g061270 34.902 510 293 13 209 693 195 690 9.10e-85 281
MS.gene063902.t1 MTR_7g084090 34.442 511 295 13 209 693 257 753 1.25e-84 283
MS.gene063902.t1 MTR_6g061200 34.000 500 282 12 209 693 195 661 3.18e-80 269
MS.gene063902.t1 MTR_6g043960 33.678 484 274 16 195 667 35 482 2.85e-71 240
MS.gene063902.t1 MTR_1g048950 33.952 539 294 12 176 694 34 530 1.27e-69 238
MS.gene063902.t1 MTR_7g084090 35.433 381 221 10 209 573 257 628 6.81e-64 224
MS.gene063902.t1 MTR_2g054460 32.308 520 260 18 176 667 9 464 7.31e-63 217
MS.gene063902.t1 MTR_7g445710 30.978 552 274 22 165 692 70 538 7.74e-61 213
MS.gene063902.t1 MTR_7g445530 31.238 525 255 21 165 665 70 512 9.85e-58 204
MS.gene063902.t1 MTR_7g450730 29.511 532 273 17 165 692 67 500 1.73e-52 189
MS.gene063902.t1 MTR_7g052480 33.788 293 181 6 408 693 266 552 1.72e-42 162
MS.gene063902.t1 MTR_1g080340 28.743 334 170 8 410 693 267 582 5.00e-34 138
MS.gene063902.t1 MTR_5g018850 31.532 333 161 12 401 694 1200 1504 4.65e-30 128
MS.gene063902.t1 MTR_7g098390 28.739 341 174 10 404 695 380 700 3.34e-29 124
MS.gene063902.t1 MTR_8g078490 28.571 329 177 8 399 694 947 1250 8.77e-29 124
MS.gene063902.t1 MTR_1g069570 28.274 336 172 9 410 695 428 744 1.37e-28 122
MS.gene063902.t1 MTR_8g078505 30.368 326 172 11 395 692 235 533 1.56e-27 117
MS.gene063902.t1 MTR_4g132610 34.419 215 118 5 481 694 852 1044 2.08e-27 119
MS.gene063902.t1 MTR_7g445600 33.987 153 61 2 513 665 243 355 7.31e-23 101
MS.gene063902.t1 MTR_7g445600 32.386 176 96 8 165 338 66 220 1.17e-11 67.4
MS.gene063902.t1 MTR_1g098000 31.401 207 92 6 498 697 72 235 1.00e-20 96.7
MS.gene063902.t1 MTR_1g098370 31.401 207 92 6 498 697 75 238 1.17e-20 96.3
MS.gene063902.t1 MTR_1g069570 26.894 264 129 7 410 624 428 676 9.13e-18 88.2
MS.gene063902.t1 MTR_0071s0100 26.347 334 166 13 379 697 81 349 3.21e-16 81.6
MS.gene063902.t1 MTR_6g059310 27.094 203 110 5 495 697 87 251 5.25e-14 74.3
MS.gene063902.t1 MTR_6g059310 27.094 203 110 5 495 697 87 251 6.07e-14 74.3
MS.gene063902.t1 MTR_1g064770 44.444 63 34 1 493 554 28 90 7.10e-12 62.4
MS.gene063902.t1 MTR_7g445810 30.653 199 109 9 172 364 91 266 3.13e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063902.t1 AT1G73100 49.422 692 304 12 14 697 16 669 0.0 655
MS.gene063902.t1 AT5G04940 47.361 701 311 10 15 697 10 670 0.0 650
MS.gene063902.t1 AT5G04940 47.361 701 311 10 15 697 10 670 0.0 650
MS.gene063902.t1 AT1G17770 39.749 717 373 19 14 696 1 692 8.93e-154 462
MS.gene063902.t1 AT2G24740 46.211 541 235 13 171 697 257 755 6.28e-147 446
MS.gene063902.t1 AT2G35160 39.591 538 271 16 168 694 261 755 3.17e-109 348
MS.gene063902.t1 AT2G35160 39.591 538 271 16 168 694 297 791 5.58e-109 348
MS.gene063902.t1 AT2G35160 39.591 538 271 16 168 694 297 791 5.58e-109 348
MS.gene063902.t1 AT2G35160 39.591 538 271 16 168 694 297 791 5.58e-109 348
MS.gene063902.t1 AT2G35160 39.591 538 271 16 168 694 297 791 5.58e-109 348
MS.gene063902.t1 AT4G13460 38.142 506 289 12 176 668 145 639 2.66e-107 340
MS.gene063902.t1 AT4G13460 38.142 506 289 12 176 668 145 639 2.66e-107 340
MS.gene063902.t1 AT2G22740 38.302 530 302 12 176 693 270 786 2.86e-106 341
MS.gene063902.t1 AT2G22740 38.302 530 302 12 176 693 270 786 2.86e-106 341
MS.gene063902.t1 AT2G33290 37.376 503 294 11 176 668 149 640 1.96e-101 325
MS.gene063902.t1 AT2G33290 37.376 503 294 11 176 668 149 640 1.96e-101 325
MS.gene063902.t1 AT2G33290 37.376 503 294 11 176 668 149 640 1.96e-101 325
MS.gene063902.t1 AT2G33290 37.376 503 294 11 176 668 149 640 1.96e-101 325
MS.gene063902.t1 AT5G13960 35.185 486 284 12 229 693 11 486 9.77e-85 276
MS.gene063902.t1 AT5G13960 34.646 508 299 13 208 693 124 620 1.84e-84 279
MS.gene063902.t1 AT5G47150 41.509 212 117 4 176 385 118 324 9.41e-44 160
MS.gene063902.t1 AT2G05900 42.857 196 108 3 250 443 1 194 5.67e-42 155
MS.gene063902.t1 AT2G05900 51.163 86 33 1 612 697 236 312 1.35e-21 96.7
MS.gene063902.t1 AT3G04380 28.060 335 170 8 410 693 128 442 4.22e-37 145
MS.gene063902.t1 AT3G04380 28.060 335 170 8 410 693 117 431 5.21e-37 145
MS.gene063902.t1 AT3G04380 28.060 335 170 8 410 693 101 415 5.40e-37 144
MS.gene063902.t1 AT3G04380 28.060 335 170 8 410 693 144 458 6.60e-37 145
MS.gene063902.t1 AT3G04380 28.060 335 170 8 410 693 117 431 6.81e-37 144
MS.gene063902.t1 AT3G04380 28.060 335 170 8 410 693 144 458 8.25e-37 145
MS.gene063902.t1 AT5G47160 41.410 227 122 6 159 381 188 407 8.62e-35 137
MS.gene063902.t1 AT5G47160 41.410 227 122 6 159 381 188 407 8.62e-35 137
MS.gene063902.t1 AT5G47160 41.410 227 122 6 159 381 188 407 8.62e-35 137
MS.gene063902.t1 AT1G04050 28.382 377 183 11 369 693 274 615 2.53e-30 127
MS.gene063902.t1 AT1G04050 28.912 377 181 12 369 693 378 719 3.99e-30 127
MS.gene063902.t1 AT1G04050 28.912 377 181 12 369 693 378 719 3.99e-30 127
MS.gene063902.t1 AT2G23740 30.818 318 168 12 407 696 1081 1374 2.31e-29 125
MS.gene063902.t1 AT2G23740 30.818 318 168 12 407 696 1088 1381 2.50e-29 125
MS.gene063902.t1 AT2G23740 30.818 318 168 12 407 696 1088 1381 2.50e-29 125
MS.gene063902.t1 AT2G23740 30.818 318 168 12 407 696 1088 1381 2.50e-29 125
MS.gene063902.t1 AT5G43990 26.849 365 181 11 379 693 354 682 4.50e-29 124
MS.gene063902.t1 AT5G43990 26.849 365 181 11 379 693 354 682 4.50e-29 124
MS.gene063902.t1 AT5G43990 26.849 365 181 11 379 693 354 682 4.50e-29 124
MS.gene063902.t1 AT5G43990 26.849 365 181 11 379 693 354 682 4.50e-29 124
MS.gene063902.t1 AT5G43990 26.849 365 181 11 379 693 377 705 5.33e-29 123
MS.gene063902.t1 AT5G43990 26.849 365 181 11 379 693 377 705 5.33e-29 123
MS.gene063902.t1 AT5G43990 26.429 420 209 14 324 693 356 725 5.69e-29 123
MS.gene063902.t1 AT5G43990 26.429 420 209 14 324 693 356 725 5.69e-29 123
MS.gene063902.t1 AT5G43990 26.429 420 209 14 324 693 333 702 5.83e-29 123
MS.gene063902.t1 AT5G43990 26.429 420 209 14 324 693 333 702 5.83e-29 123
MS.gene063902.t1 AT5G43990 26.429 420 209 14 324 693 333 702 5.83e-29 123
MS.gene063902.t1 AT5G43990 26.429 420 209 14 324 693 333 702 5.83e-29 123
MS.gene063902.t1 AT5G43990 26.849 365 181 11 379 693 285 613 5.85e-29 123
MS.gene063902.t1 AT5G43990 26.849 365 181 11 379 693 305 633 9.46e-29 122
MS.gene063902.t1 AT5G43990 26.849 365 181 11 379 693 305 633 9.46e-29 122
MS.gene063902.t1 AT5G43990 26.849 365 181 11 379 693 305 633 9.46e-29 122
MS.gene063902.t1 AT5G43990 26.849 365 181 11 379 693 305 633 9.46e-29 122
MS.gene063902.t1 AT2G23740 31.301 246 122 11 407 624 1088 1314 5.90e-20 95.9
MS.gene063902.t1 AT2G23740 31.301 246 122 11 407 624 1088 1314 5.90e-20 95.9
MS.gene063902.t1 AT3G03750 30.396 227 131 8 471 694 145 347 6.08e-19 89.4
MS.gene063902.t1 AT4G30860 28.643 199 102 5 499 697 307 465 2.74e-14 76.6
MS.gene063902.t1 AT3G03750 27.556 225 124 8 471 694 145 331 2.38e-13 72.4
MS.gene063902.t1 AT3G59960 28.333 180 87 6 520 697 111 250 6.63e-11 64.3
MS.gene063902.t1 AT3G59960 28.333 180 87 6 520 697 111 250 6.63e-11 64.3
MS.gene063902.t1 AT3G59960 28.333 180 87 6 520 697 111 250 6.63e-11 64.3

Find 156 sgRNAs with CRISPR-Local

Find 185 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACGCAGATTGAACATATTT+TGG 0.160323 8.1:+61594793 None:intergenic
GAACTCTTGTAGACCCTTAT+TGG 0.198500 8.1:+61594595 None:intergenic
TGCTTATGCTGCTTGGAAAT+TGG 0.240702 8.1:-61593729 MS.gene063902:CDS
CTCTTTCAATCCAAGAATCT+TGG 0.247325 8.1:+61593810 None:intergenic
GCACTAGACCAAAAGGTTTC+GGG 0.260116 8.1:+61593555 None:intergenic
AGCTATATTTCCCACATTCT+TGG 0.262990 8.1:+61593055 None:intergenic
TGCACTAGACCAAAAGGTTT+CGG 0.303413 8.1:+61593554 None:intergenic
TGGTGCCTGGGATTGAGATT+GGG 0.314399 8.1:-61594189 MS.gene063902:CDS
GTGGTGCCTGGGATTGAGAT+TGG 0.321695 8.1:-61594190 MS.gene063902:CDS
TTCTTGGCACTTATAATTAG+AGG 0.323045 8.1:+61593071 None:intergenic
TGGAGATAGCGACGATTATT+CGG 0.330458 8.1:-61594542 MS.gene063902:CDS
GATTATTCGGAAGGGTTTGT+AGG 0.338716 8.1:-61594529 MS.gene063902:CDS
CCATTGGAGGAATATGTCTA+AGG 0.339713 8.1:+61592937 None:intergenic
TCGGCTACTTTGACATCAAC+AGG 0.342895 8.1:+61594682 None:intergenic
ATTGCAAAGAGTTTCTTAAA+AGG 0.342943 8.1:-61594471 MS.gene063902:CDS
TATATAAAATCCAAGATTCT+TGG 0.344747 8.1:-61593820 MS.gene063902:CDS
GCAGAGTTAACATATGATTA+TGG 0.349411 8.1:-61592915 MS.gene063902:CDS
AGAAGAGCGGGCGTGGTGCC+TGG 0.355977 8.1:-61594202 MS.gene063902:CDS
GCAAAGTGCCGTGGTTTCTT+TGG 0.357611 8.1:-61592822 MS.gene063902:CDS
GAATTATGAACCTAGCTTAC+TGG 0.368503 8.1:-61593141 MS.gene063902:CDS
CTGCCAAAGTGACTCCAATA+AGG 0.374599 8.1:-61594609 MS.gene063902:CDS
CAGAACAAAGGGTAGAGGTT+GGG 0.385564 8.1:-61593315 MS.gene063902:CDS
ACTTGAATGGTTCATAAATA+CGG 0.393021 8.1:+61593165 None:intergenic
TCAAAGAGGTAATCTTGCTT+TGG 0.393398 8.1:-61593936 MS.gene063902:CDS
TTCTTGCTGATCTCTCCAAT+GGG 0.393516 8.1:-61593664 MS.gene063902:CDS
GAGTATCAAGGATGGATCTA+AGG 0.393584 8.1:-61594092 MS.gene063902:CDS
GGAGTCACTTTGGCAGCAAC+AGG 0.394355 8.1:+61594616 None:intergenic
AGAATACTATTTGCAGTATA+CGG 0.394436 8.1:+61593446 None:intergenic
CTTTCGGAAGAGGAATTTGA+TGG 0.395049 8.1:+61594719 None:intergenic
GGTTCATAATTCCACTTGAA+TGG 0.395912 8.1:+61593152 None:intergenic
ACATCATTGACAAGTGATAC+TGG 0.398710 8.1:+61593629 None:intergenic
TGGATTGAAAGAGGGAAATC+TGG 0.399448 8.1:-61593800 MS.gene063902:CDS
ATTCTTGCTGATCTCTCCAA+TGG 0.405786 8.1:-61593665 MS.gene063902:CDS
AGTAATGCTTTGACTTGTAA+AGG 0.409168 8.1:-61594244 MS.gene063902:CDS
GTTGTTTCGTCAGGTGTATA+TGG 0.410656 8.1:-61594049 MS.gene063902:CDS
GCGTTAAGCGTTGTTTCGTC+AGG 0.419354 8.1:-61594058 MS.gene063902:CDS
AGAACAAAGGGTAGAGGTTG+GGG 0.428660 8.1:-61593314 MS.gene063902:CDS
CACTAAAAGATGATGGTGAT+AGG 0.431343 8.1:-61594384 MS.gene063902:CDS
GTAATGCTTTGACTTGTAAA+GGG 0.433132 8.1:-61594243 MS.gene063902:CDS
GGGGTTTCCTCAGCTTCTTT+CGG 0.441186 8.1:+61594703 None:intergenic
TCCTCAGCTTCTTTCGGAAG+AGG 0.444901 8.1:+61594709 None:intergenic
CACGAGGAGAAGAGCGGGCG+TGG 0.458603 8.1:-61594209 MS.gene063902:CDS
CGAATGGAAATGTGTCTTGT+GGG 0.460019 8.1:-61594151 MS.gene063902:CDS
CAAGATTCTTGGATTGAAAG+AGG 0.462943 8.1:-61593809 MS.gene063902:CDS
GCATTTCTTTCTCCTTCTAA+AGG 0.463277 8.1:+61592857 None:intergenic
GGGTTTGCATGCTCAATCAA+TGG 0.467421 8.1:-61594131 MS.gene063902:CDS
GGTTTGACAAATGAGTAAAA+TGG 0.474364 8.1:+61594742 None:intergenic
ATTACCCATGCTGGTCATGC+TGG 0.474621 8.1:-61592891 MS.gene063902:CDS
CTTACATCTTCCAGTAAGCT+AGG 0.477855 8.1:+61593131 None:intergenic
TTACAATTGCAGCTTAAAGA+AGG 0.477858 8.1:+61593530 None:intergenic
TGCCAAAGTGACTCCAATAA+GGG 0.477984 8.1:-61594608 MS.gene063902:CDS
AACAGGTGCTAAACTACGTA+AGG 0.479792 8.1:+61594819 None:intergenic
ATAAAAGTACCAGCACGTAT+AGG 0.483482 8.1:+61593275 None:intergenic
GAAGAGCGGGCGTGGTGCCT+GGG 0.483938 8.1:-61594201 MS.gene063902:CDS
TATTTAAGTATAAGTTGGTA+AGG 0.490370 8.1:-61593769 MS.gene063902:CDS
TTTCTGGTGGATACCCATCT+GGG 0.495237 8.1:-61594771 MS.gene063902:CDS
CATGAACAGTTCAAATCACC+TGG 0.499372 8.1:+61593494 None:intergenic
GAGGTAGCAGTGCCTTTAGA+AGG 0.502063 8.1:-61592869 MS.gene063902:CDS
AAAACTCGCGAGCCGGTTGT+TGG 0.502511 8.1:-61594439 MS.gene063902:CDS
ACCTCCAGCATGACCAGCAT+GGG 0.504841 8.1:+61592887 None:intergenic
GACCCTTATTGGAGTCACTT+TGG 0.504947 8.1:+61594606 None:intergenic
TTCATGCATTCAAAGAAATG+AGG 0.505419 8.1:-61593477 MS.gene063902:CDS
GCACTTATAATTAGAGGAGA+TGG 0.508609 8.1:+61593077 None:intergenic
GAAATGAATCAACAAGGCTA+TGG 0.511296 8.1:-61594562 MS.gene063902:CDS
GAAGGCTGCACTAGACCAAA+AGG 0.511466 8.1:+61593548 None:intergenic
TGGTATATTTAAGTATAAGT+TGG 0.512381 8.1:-61593774 MS.gene063902:CDS
TTCAACATTCTGATATACCT+TGG 0.513102 8.1:+61593220 None:intergenic
CTTGGAAATTGGCTCAAAAG+TGG 0.515222 8.1:-61593718 MS.gene063902:CDS
AAGGTATATCAGAATGTTGA+AGG 0.517616 8.1:-61593218 MS.gene063902:CDS
TGGAATACTTTCAACCCCAT+TGG 0.517944 8.1:+61593649 None:intergenic
TCATATGTTAACTCTGCCAT+TGG 0.520039 8.1:+61592921 None:intergenic
ATGGAAGTGTTCAGAACAAA+GGG 0.520947 8.1:-61593326 MS.gene063902:CDS
TATGTTAACTCTGCCATTGG+AGG 0.521537 8.1:+61592924 None:intergenic
AATAAAACCATTCCTTGTAC+AGG 0.521861 8.1:+61593685 None:intergenic
GAAGAACAAAACTCGCGAGC+CGG 0.522460 8.1:-61594446 MS.gene063902:CDS
TATAAGTTGGTAAGGTTACC+TGG 0.522467 8.1:-61593761 MS.gene063902:CDS
GAACTCGTACCACCAACAAC+CGG 0.528217 8.1:+61594427 None:intergenic
GGAAGGCAGGTTCCTGTACA+AGG 0.528660 8.1:-61593697 MS.gene063902:CDS
TGATAAACGAAAGCGTAGTA+CGG 0.532272 8.1:-61594506 MS.gene063902:CDS
TGTAACACAGCATGTGTCCC+AGG 0.534817 8.1:-61593512 MS.gene063902:CDS
AACAAACACGAGGAGAAGAG+CGG 0.537646 8.1:-61594215 MS.gene063902:CDS
GCAGGTTCCTGTACAAGGAA+TGG 0.539532 8.1:-61593692 MS.gene063902:CDS
AATTATAAGTGCCAAGAATG+TGG 0.540601 8.1:-61593066 MS.gene063902:CDS
TCGAATGGAAATGTGTCTTG+TGG 0.542415 8.1:-61594152 MS.gene063902:CDS
TTGGCTCAAAAGTGGAAGGC+AGG 0.546449 8.1:-61593710 MS.gene063902:CDS
CCTTAGACATATTCCTCCAA+TGG 0.547540 8.1:-61592937 MS.gene063902:CDS
GGTTTGCATGCTCAATCAAT+GGG 0.548358 8.1:-61594130 MS.gene063902:CDS
ACTAAAAGATGATGGTGATA+GGG 0.551648 8.1:-61594383 MS.gene063902:CDS
CAAATAGTATTCTAGTGAGT+CGG 0.552747 8.1:-61593436 MS.gene063902:CDS
AAGATTCTTGGATTGAAAGA+GGG 0.554674 8.1:-61593808 MS.gene063902:CDS
ACTCGCGAGCCGGTTGTTGG+TGG 0.555816 8.1:-61594436 MS.gene063902:CDS
TCAGAACAAAGGGTAGAGGT+TGG 0.558625 8.1:-61593316 MS.gene063902:CDS
TTTCGGAAGAGGAATTTGAT+GGG 0.558690 8.1:+61594720 None:intergenic
GGTGCCTGGGATTGAGATTG+GGG 0.558794 8.1:-61594188 MS.gene063902:CDS
GATTATGGAATTACCCATGC+TGG 0.562248 8.1:-61592900 MS.gene063902:CDS
AACCCGACACTAAAAGATGA+TGG 0.564385 8.1:-61594391 MS.gene063902:CDS
GTAGGAAAACACCGACACAT+AGG 0.564832 8.1:+61593389 None:intergenic
ACATCCCCAATCTCAATCCC+AGG 0.570470 8.1:+61594184 None:intergenic
TACCTCCAGCATGACCAGCA+TGG 0.572482 8.1:+61592886 None:intergenic
TAGGAAAACACCGACACATA+GGG 0.573999 8.1:+61593390 None:intergenic
GATAGCGACGATTATTCGGA+AGG 0.574436 8.1:-61594538 MS.gene063902:CDS
TAAAATGGAGGAAACCCAGA+TGG 0.574940 8.1:+61594757 None:intergenic
GATGAAGTTAGAGTCATTCG+AGG 0.576279 8.1:-61593893 MS.gene063902:CDS
ATTATAAGTGCCAAGAATGT+GGG 0.579471 8.1:-61593065 MS.gene063902:CDS
GTGTTCAGAACAAAGGGTAG+AGG 0.581999 8.1:-61593320 MS.gene063902:CDS
TGACGTTTGATTCAATTCGA+AGG 0.582508 8.1:-61594339 MS.gene063902:CDS
AAGCCGCTTATTCATGAATG+TGG 0.582827 8.1:-61593413 MS.gene063902:CDS
TTGACAAATGAGTAAAATGG+AGG 0.583789 8.1:+61594745 None:intergenic
GTTCCTTCGACTCTTCAAGT+TGG 0.586309 8.1:+61594308 None:intergenic
TCCTCTTCCGAAAGAAGCTG+AGG 0.587764 8.1:-61594710 MS.gene063902:CDS
CGGCTACTTTGACATCAACA+GGG 0.587818 8.1:+61594683 None:intergenic
ACACTGGATCCTATACGTGC+TGG 0.589618 8.1:-61593284 MS.gene063902:CDS
GGTGGTACGAGTTCTTATGT+TGG 0.589976 8.1:-61594418 MS.gene063902:CDS
CATTGGAGGAATATGTCTAA+GGG 0.591612 8.1:+61592938 None:intergenic
AATTGATTATATGAGTATCA+AGG 0.594679 8.1:-61594104 MS.gene063902:CDS
CATGGAAGTGTTCAGAACAA+AGG 0.594814 8.1:-61593327 MS.gene063902:CDS
CAATGATGTCGATGATGAGA+AGG 0.596174 8.1:-61593615 MS.gene063902:CDS
ACAAACACGAGGAGAAGAGC+GGG 0.596233 8.1:-61594214 MS.gene063902:CDS
GACTGGTTTAAAACAACACA+TGG 0.599479 8.1:-61593345 MS.gene063902:CDS
AGAAGTTATTAACAGAGCCA+AGG 0.601057 8.1:-61593237 MS.gene063902:CDS
TCATGCATTCAAAGAAATGA+GGG 0.603338 8.1:-61593476 MS.gene063902:CDS
CGTTTGATTCAATTCGAAGG+AGG 0.603429 8.1:-61594336 MS.gene063902:CDS
GTATTTATGAACCATTCAAG+TGG 0.607961 8.1:-61593163 MS.gene063902:CDS
GAAATTGGCTCAAAAGTGGA+AGG 0.609566 8.1:-61593714 MS.gene063902:CDS
AGGAGAAAGAAATGCTTGTG+TGG 0.611149 8.1:-61592849 MS.gene063902:CDS
GAACAAAGGGTAGAGGTTGG+GGG 0.611366 8.1:-61593313 MS.gene063902:CDS
GATTATATGAGTATCAAGGA+TGG 0.613333 8.1:-61594100 MS.gene063902:CDS
TTCGGAAGAGGAATTTGATG+GGG 0.613859 8.1:+61594721 None:intergenic
ATAGCGACGATTATTCGGAA+GGG 0.618833 8.1:-61594537 MS.gene063902:CDS
GGAGAAAGAAATGCTTGTGT+GGG 0.619249 8.1:-61592848 MS.gene063902:CDS
ATGCCAACTTGAAGAGTCGA+AGG 0.621780 8.1:-61594311 MS.gene063902:CDS
ACCCATGCTGGTCATGCTGG+AGG 0.621845 8.1:-61592888 MS.gene063902:CDS
ACAGGTGCTAAACTACGTAA+GGG 0.625298 8.1:+61594820 None:intergenic
GAAAGAGGGAAATCTGGCGG+TGG 0.632493 8.1:-61593794 MS.gene063902:CDS
TCTTGCTGATCTCTCCAATG+GGG 0.634628 8.1:-61593663 MS.gene063902:CDS
AAGTTCAAATGTATGTAGTG+AGG 0.636973 8.1:-61593111 MS.gene063902:CDS
AAAATGGAGGAAACCCAGAT+GGG 0.640580 8.1:+61594758 None:intergenic
GGGCCACATTCATGAATAAG+CGG 0.645886 8.1:+61593410 None:intergenic
TTGGCAGCCAGTCTTATATG+CGG 0.646377 8.1:-61592997 MS.gene063902:CDS
TATCAAGGATGGATCTAAGG+AGG 0.648003 8.1:-61594089 MS.gene063902:CDS
TGCACTTGCTATCAAGCGTG+CGG 0.648738 8.1:-61594278 MS.gene063902:CDS
ACTGATCAGAAGCTTCAAAG+AGG 0.649359 8.1:-61593950 MS.gene063902:CDS
TTGCATGCTCAATCAATGGG+TGG 0.651570 8.1:-61594127 MS.gene063902:CDS
GGCTACTTTGACATCAACAG+GGG 0.664370 8.1:+61594684 None:intergenic
TGTATATGGTGATGATACAG+AGG 0.665371 8.1:-61594035 MS.gene063902:CDS
TGTGGGTCAGCAAAGTGCCG+TGG 0.671789 8.1:-61592831 MS.gene063902:CDS
ATGAATGTGGCCCTATGTGT+CGG 0.674340 8.1:-61593400 MS.gene063902:CDS
CAAAGTAGCCGAGAAAACGC+CGG 0.676869 8.1:-61594671 MS.gene063902:CDS
TGGATCTAAGGAGGATACTG+TGG 0.679943 8.1:-61594080 MS.gene063902:CDS
AATGATGTCGATGATGAGAA+GGG 0.683211 8.1:-61593614 MS.gene063902:CDS
ATTGTTAACCAAAGAAACCA+CGG 0.691606 8.1:+61592814 None:intergenic
GATGAAGAAATGAATCAACA+AGG 0.704808 8.1:-61594568 MS.gene063902:CDS
ATTGAAAGAGGGAAATCTGG+CGG 0.710427 8.1:-61593797 MS.gene063902:CDS
ATGAACAGTTCAAATCACCT+GGG 0.723585 8.1:+61593495 None:intergenic
AAGGGTTTAAAACAAACACG+AGG 0.770459 8.1:-61594225 MS.gene063902:CDS
CTTTGGACAGAAGTGCACAG+CGG 0.772147 8.1:-61593919 MS.gene063902:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAATGTTTTAATTTATAG+TGG - chr8.1:61593697-61593716 MS.gene063902:CDS 10.0%
!! AATTGATTATATGAGTATCA+AGG - chr8.1:61593603-61593622 MS.gene063902:CDS 20.0%
!! TATATAAAATCCAAGATTCT+TGG - chr8.1:61593887-61593906 MS.gene063902:CDS 20.0%
!! TCAAAAATCTATATGTATGA+TGG - chr8.1:61593862-61593881 MS.gene063902:CDS 20.0%
!! TGGTATATTTAAGTATAAGT+TGG - chr8.1:61593933-61593952 MS.gene063902:CDS 20.0%
!!! TATTTAAGTATAAGTTGGTA+AGG - chr8.1:61593938-61593957 MS.gene063902:CDS 20.0%
! AAAAAATGCAATGTGGATAA+AGG + chr8.1:61594748-61594767 None:intergenic 25.0%
! ACTTGAATGGTTCATAAATA+CGG + chr8.1:61594545-61594564 None:intergenic 25.0%
! AGAATACTATTTGCAGTATA+CGG + chr8.1:61594264-61594283 None:intergenic 25.0%
! ATTGCAAAGAGTTTCTTAAA+AGG - chr8.1:61593236-61593255 MS.gene063902:CDS 25.0%
!! ATTTTTGAACTTCTATTCAC+AGG + chr8.1:61593850-61593869 None:intergenic 25.0%
!!! GTTTTAATTTATAGTGGTCA+GGG - chr8.1:61593703-61593722 MS.gene063902:CDS 25.0%
!!! TGAACATATTTTGGTAAAAC+AGG + chr8.1:61592908-61592927 None:intergenic 25.0%
!!! TGTTTTAATTTATAGTGGTC+AGG - chr8.1:61593702-61593721 MS.gene063902:CDS 25.0%
AAAAAATTGCTTATGCTGCT+TGG - chr8.1:61593971-61593990 MS.gene063902:CDS 30.0%
AAGATTCTTGGATTGAAAGA+GGG - chr8.1:61593899-61593918 MS.gene063902:CDS 30.0%
AAGGTATATCAGAATGTTGA+AGG - chr8.1:61594489-61594508 MS.gene063902:CDS 30.0%
AAGTTCAAATGTATGTAGTG+AGG - chr8.1:61594596-61594615 MS.gene063902:CDS 30.0%
AATAAAACCATTCCTTGTAC+AGG + chr8.1:61594025-61594044 None:intergenic 30.0%
AATTATAAGTGCCAAGAATG+TGG - chr8.1:61594641-61594660 MS.gene063902:CDS 30.0%
ATTATAAGTGCCAAGAATGT+GGG - chr8.1:61594642-61594661 MS.gene063902:CDS 30.0%
CAAATAGTATTCTAGTGAGT+CGG - chr8.1:61594271-61594290 MS.gene063902:CDS 30.0%
GATGAAGAAATGAATCAACA+AGG - chr8.1:61593139-61593158 MS.gene063902:CDS 30.0%
GATTATATGAGTATCAAGGA+TGG - chr8.1:61593607-61593626 MS.gene063902:CDS 30.0%
GCAGAGTTAACATATGATTA+TGG - chr8.1:61594792-61594811 MS.gene063902:CDS 30.0%
GGTTTGACAAATGAGTAAAA+TGG + chr8.1:61592968-61592987 None:intergenic 30.0%
GTATTTATGAACCATTCAAG+TGG - chr8.1:61594544-61594563 MS.gene063902:CDS 30.0%
GTGAAATAAGTGAAAAAAGC+AGG + chr8.1:61594120-61594139 None:intergenic 30.0%
TCATGCATTCAAAGAAATGA+GGG - chr8.1:61594231-61594250 MS.gene063902:CDS 30.0%
TTACAATTGCAGCTTAAAGA+AGG + chr8.1:61594180-61594199 None:intergenic 30.0%
TTCAACATTCTGATATACCT+TGG + chr8.1:61594490-61594509 None:intergenic 30.0%
TTCATGCATTCAAAGAAATG+AGG - chr8.1:61594230-61594249 MS.gene063902:CDS 30.0%
TTCTTGGCACTTATAATTAG+AGG + chr8.1:61594639-61594658 None:intergenic 30.0%
TTGACAAATGAGTAAAATGG+AGG + chr8.1:61592965-61592984 None:intergenic 30.0%
! AACGCAGATTGAACATATTT+TGG + chr8.1:61592917-61592936 None:intergenic 30.0%
! ACTAAAAGATGATGGTGATA+GGG - chr8.1:61593324-61593343 MS.gene063902:CDS 30.0%
! TTATTTTCCGCATATAAGAC+TGG + chr8.1:61594720-61594739 None:intergenic 30.0%
!! ACTTTTATTTGTGAGTATGC+AGG - chr8.1:61594447-61594466 MS.gene063902:CDS 30.0%
!! AGTAATGCTTTGACTTGTAA+AGG - chr8.1:61593463-61593482 MS.gene063902:CDS 30.0%
!! GTAATGCTTTGACTTGTAAA+GGG - chr8.1:61593464-61593483 MS.gene063902:CDS 30.0%
!!! GGATGTTTTCTTTTTTCGAA+TGG - chr8.1:61593540-61593559 MS.gene063902:CDS 30.0%
AAAAATCGAGTATCACAGAC+TGG - chr8.1:61594345-61594364 MS.gene063902:CDS 35.0%
AATGATGTCGATGATGAGAA+GGG - chr8.1:61594093-61594112 MS.gene063902:CDS 35.0%
ACATCATTGACAAGTGATAC+TGG + chr8.1:61594081-61594100 None:intergenic 35.0%
AGAAGTTATTAACAGAGCCA+AGG - chr8.1:61594470-61594489 MS.gene063902:CDS 35.0%
AGCTATATTTCCCACATTCT+TGG + chr8.1:61594655-61594674 None:intergenic 35.0%
ATGAACAGTTCAAATCACCT+GGG + chr8.1:61594215-61594234 None:intergenic 35.0%
CAAGATTCTTGGATTGAAAG+AGG - chr8.1:61593898-61593917 MS.gene063902:CDS 35.0%
CATTGGAGGAATATGTCTAA+GGG + chr8.1:61594772-61594791 None:intergenic 35.0%
CTCTTTCAATCCAAGAATCT+TGG + chr8.1:61593900-61593919 None:intergenic 35.0%
GAAATGAATCAACAAGGCTA+TGG - chr8.1:61593145-61593164 MS.gene063902:CDS 35.0%
GAATTATGAACCTAGCTTAC+TGG - chr8.1:61594566-61594585 MS.gene063902:CDS 35.0%
GCACTTATAATTAGAGGAGA+TGG + chr8.1:61594633-61594652 None:intergenic 35.0%
GCATTTCTTTCTCCTTCTAA+AGG + chr8.1:61594853-61594872 None:intergenic 35.0%
GGTTCATAATTCCACTTGAA+TGG + chr8.1:61594558-61594577 None:intergenic 35.0%
TAAGGGCAAAAAATGCAATG+TGG + chr8.1:61594755-61594774 None:intergenic 35.0%
TCAAAGAGGTAATCTTGCTT+TGG - chr8.1:61593771-61593790 MS.gene063902:CDS 35.0%
TCATATGTTAACTCTGCCAT+TGG + chr8.1:61594789-61594808 None:intergenic 35.0%
TGACGTTTGATTCAATTCGA+AGG - chr8.1:61593368-61593387 MS.gene063902:CDS 35.0%
TTTCGGAAGAGGAATTTGAT+GGG + chr8.1:61592990-61593009 None:intergenic 35.0%
! AAGGGTTTAAAACAAACACG+AGG - chr8.1:61593482-61593501 MS.gene063902:CDS 35.0%
! CACTAAAAGATGATGGTGAT+AGG - chr8.1:61593323-61593342 MS.gene063902:CDS 35.0%
! TATGTTCAATCTGCGTTTTC+TGG - chr8.1:61592920-61592939 MS.gene063902:CDS 35.0%
! TCACCATCATCTTTTAGTGT+CGG + chr8.1:61593322-61593341 None:intergenic 35.0%
! TGATAAACGAAAGCGTAGTA+CGG - chr8.1:61593201-61593220 MS.gene063902:CDS 35.0%
! TGTATATGGTGATGATACAG+AGG - chr8.1:61593672-61593691 MS.gene063902:CDS 35.0%
!! ATAAAAGTACCAGCACGTAT+AGG + chr8.1:61594435-61594454 None:intergenic 35.0%
!! ATGGAAGTGTTCAGAACAAA+GGG - chr8.1:61594381-61594400 MS.gene063902:CDS 35.0%
!! GACTGGTTTAAAACAACACA+TGG - chr8.1:61594362-61594381 MS.gene063902:CDS 35.0%
!! TATAAGTTGGTAAGGTTACC+TGG - chr8.1:61593946-61593965 MS.gene063902:CDS 35.0%
!!! GCATAAGCAATTTTTTGACC+AGG + chr8.1:61593967-61593986 None:intergenic 35.0%
AAAATGGAGGAAACCCAGAT+GGG + chr8.1:61592952-61592971 None:intergenic 40.0%
AACAGGTGCTAAACTACGTA+AGG + chr8.1:61592891-61592910 None:intergenic 40.0%
AACCCGACACTAAAAGATGA+TGG - chr8.1:61593316-61593335 MS.gene063902:CDS 40.0%
AAGCCGCTTATTCATGAATG+TGG - chr8.1:61594294-61594313 MS.gene063902:CDS 40.0%
ACAGGTGCTAAACTACGTAA+GGG + chr8.1:61592890-61592909 None:intergenic 40.0%
ACTGATCAGAAGCTTCAAAG+AGG - chr8.1:61593757-61593776 MS.gene063902:CDS 40.0%
ACTGGCTGCCAAAAAACATT+TGG + chr8.1:61594702-61594721 None:intergenic 40.0%
AGGAGAAAGAAATGCTTGTG+TGG - chr8.1:61594858-61594877 MS.gene063902:CDS 40.0%
ATAGCGACGATTATTCGGAA+GGG - chr8.1:61593170-61593189 MS.gene063902:CDS 40.0%
ATTCTTGCTGATCTCTCCAA+TGG - chr8.1:61594042-61594061 MS.gene063902:CDS 40.0%
ATTGAAAGAGGGAAATCTGG+CGG - chr8.1:61593910-61593929 MS.gene063902:CDS 40.0%
CAATGATGTCGATGATGAGA+AGG - chr8.1:61594092-61594111 MS.gene063902:CDS 40.0%
CATGAACAGTTCAAATCACC+TGG + chr8.1:61594216-61594235 None:intergenic 40.0%
CCATTGGAGGAATATGTCTA+AGG + chr8.1:61594773-61594792 None:intergenic 40.0%
CCTTAGACATATTCCTCCAA+TGG - chr8.1:61594770-61594789 MS.gene063902:CDS 40.0%
CGAATGGAAATGTGTCTTGT+GGG - chr8.1:61593556-61593575 MS.gene063902:CDS 40.0%
CGTTTGATTCAATTCGAAGG+AGG - chr8.1:61593371-61593390 MS.gene063902:CDS 40.0%
CTGGCTGCCAAAAAACATTT+GGG + chr8.1:61594701-61594720 None:intergenic 40.0%
CTTACATCTTCCAGTAAGCT+AGG + chr8.1:61594579-61594598 None:intergenic 40.0%
CTTTCGGAAGAGGAATTTGA+TGG + chr8.1:61592991-61593010 None:intergenic 40.0%
GAACTCTTGTAGACCCTTAT+TGG + chr8.1:61593115-61593134 None:intergenic 40.0%
GAGTATCAAGGATGGATCTA+AGG - chr8.1:61593615-61593634 MS.gene063902:CDS 40.0%
GATGAAGTTAGAGTCATTCG+AGG - chr8.1:61593814-61593833 MS.gene063902:CDS 40.0%
GATTATGGAATTACCCATGC+TGG - chr8.1:61594807-61594826 MS.gene063902:CDS 40.0%
GATTATTCGGAAGGGTTTGT+AGG - chr8.1:61593178-61593197 MS.gene063902:CDS 40.0%
GGAGAAAGAAATGCTTGTGT+GGG - chr8.1:61594859-61594878 MS.gene063902:CDS 40.0%
GGTTTGCATGCTCAATCAAT+GGG - chr8.1:61593577-61593596 MS.gene063902:CDS 40.0%
TAAAATGGAGGAAACCCAGA+TGG + chr8.1:61592953-61592972 None:intergenic 40.0%
TAGGAAAACACCGACACATA+GGG + chr8.1:61594320-61594339 None:intergenic 40.0%
TATCAAGGATGGATCTAAGG+AGG - chr8.1:61593618-61593637 MS.gene063902:CDS 40.0%
TATGTTAACTCTGCCATTGG+AGG + chr8.1:61594786-61594805 None:intergenic 40.0%
TCGAATGGAAATGTGTCTTG+TGG - chr8.1:61593555-61593574 MS.gene063902:CDS 40.0%
TGCACTAGACCAAAAGGTTT+CGG + chr8.1:61594156-61594175 None:intergenic 40.0%
TGCCAAAGTGACTCCAATAA+GGG - chr8.1:61593099-61593118 MS.gene063902:CDS 40.0%
TGGAATACTTTCAACCCCAT+TGG + chr8.1:61594061-61594080 None:intergenic 40.0%
TGGAGATAGCGACGATTATT+CGG - chr8.1:61593165-61593184 MS.gene063902:CDS 40.0%
TGGATTGAAAGAGGGAAATC+TGG - chr8.1:61593907-61593926 MS.gene063902:CDS 40.0%
TGGCTGCCAAAAAACATTTG+GGG + chr8.1:61594700-61594719 None:intergenic 40.0%
TTCGGAAGAGGAATTTGATG+GGG + chr8.1:61592989-61593008 None:intergenic 40.0%
TTCTTGCTGATCTCTCCAAT+GGG - chr8.1:61594043-61594062 MS.gene063902:CDS 40.0%
! CACCATCATCTTTTAGTGTC+GGG + chr8.1:61593321-61593340 None:intergenic 40.0%
! CTCAAAAACCCGAAACCTTT+TGG - chr8.1:61594144-61594163 MS.gene063902:CDS 40.0%
! CTGTGATACTCGATTTTTGC+AGG + chr8.1:61594343-61594362 None:intergenic 40.0%
! CTTGGAAATTGGCTCAAAAG+TGG - chr8.1:61593989-61594008 MS.gene063902:CDS 40.0%
! GAAATTGGCTCAAAAGTGGA+AGG - chr8.1:61593993-61594012 MS.gene063902:CDS 40.0%
! GATACTCGATTTTTGCAGGT+AGG + chr8.1:61594339-61594358 None:intergenic 40.0%
! GTTGTTTCGTCAGGTGTATA+TGG - chr8.1:61593658-61593677 MS.gene063902:CDS 40.0%
! TGCTTATGCTGCTTGGAAAT+TGG - chr8.1:61593978-61593997 MS.gene063902:CDS 40.0%
!! CATGGAAGTGTTCAGAACAA+AGG - chr8.1:61594380-61594399 MS.gene063902:CDS 40.0%
!!! GTTGCTCCCCAAATGTTTTT+TGG - chr8.1:61594691-61594710 MS.gene063902:CDS 40.0%
AACAAACACGAGGAGAAGAG+CGG - chr8.1:61593492-61593511 MS.gene063902:CDS 45.0%
AGAACAAAGGGTAGAGGTTG+GGG - chr8.1:61594393-61594412 MS.gene063902:CDS 45.0%
ATGAATGTGGCCCTATGTGT+CGG - chr8.1:61594307-61594326 MS.gene063902:CDS 45.0%
ATGCCAACTTGAAGAGTCGA+AGG - chr8.1:61593396-61593415 MS.gene063902:CDS 45.0%
CAGAACAAAGGGTAGAGGTT+GGG - chr8.1:61594392-61594411 MS.gene063902:CDS 45.0%
CTGCCAAAGTGACTCCAATA+AGG - chr8.1:61593098-61593117 MS.gene063902:CDS 45.0%
GACCCTTATTGGAGTCACTT+TGG + chr8.1:61593104-61593123 None:intergenic 45.0%
GATAGCGACGATTATTCGGA+AGG - chr8.1:61593169-61593188 MS.gene063902:CDS 45.0%
GCACTAGACCAAAAGGTTTC+GGG + chr8.1:61594155-61594174 None:intergenic 45.0%
GGGCCACATTCATGAATAAG+CGG + chr8.1:61594300-61594319 None:intergenic 45.0%
GGGTTTGCATGCTCAATCAA+TGG - chr8.1:61593576-61593595 MS.gene063902:CDS 45.0%
GGTGGTACGAGTTCTTATGT+TGG - chr8.1:61593289-61593308 MS.gene063902:CDS 45.0%
GTAGGAAAACACCGACACAT+AGG + chr8.1:61594321-61594340 None:intergenic 45.0%
GTGTTCAGAACAAAGGGTAG+AGG - chr8.1:61594387-61594406 MS.gene063902:CDS 45.0%
GTTCCTTCGACTCTTCAAGT+TGG + chr8.1:61593402-61593421 None:intergenic 45.0%
TCAGAACAAAGGGTAGAGGT+TGG - chr8.1:61594391-61594410 MS.gene063902:CDS 45.0%
TCTTGCTGATCTCTCCAATG+GGG - chr8.1:61594044-61594063 MS.gene063902:CDS 45.0%
TGGATCTAAGGAGGATACTG+TGG - chr8.1:61593627-61593646 MS.gene063902:CDS 45.0%
TTGCATGCTCAATCAATGGG+TGG - chr8.1:61593580-61593599 MS.gene063902:CDS 45.0%
! CGGCTACTTTGACATCAACA+GGG + chr8.1:61593027-61593046 None:intergenic 45.0%
! GGCTACTTTGACATCAACAG+GGG + chr8.1:61593026-61593045 None:intergenic 45.0%
! GTTCAATCTGCGTTTTCTGG+TGG - chr8.1:61592923-61592942 MS.gene063902:CDS 45.0%
! TCGGCTACTTTGACATCAAC+AGG + chr8.1:61593028-61593047 None:intergenic 45.0%
! TTGGCAGCCAGTCTTATATG+CGG - chr8.1:61594710-61594729 MS.gene063902:CDS 45.0%
! TTTCTGGTGGATACCCATCT+GGG - chr8.1:61592936-61592955 MS.gene063902:CDS 45.0%
!! TTTTCTGGTGGATACCCATC+TGG - chr8.1:61592935-61592954 MS.gene063902:CDS 45.0%
ACAAACACGAGGAGAAGAGC+GGG - chr8.1:61593493-61593512 MS.gene063902:CDS 50.0%
ACACTGGATCCTATACGTGC+TGG - chr8.1:61594423-61594442 MS.gene063902:CDS 50.0%
ACATCCCCAATCTCAATCCC+AGG + chr8.1:61593526-61593545 None:intergenic 50.0%
ATTACCCATGCTGGTCATGC+TGG - chr8.1:61594816-61594835 MS.gene063902:CDS 50.0%
CAAAGTAGCCGAGAAAACGC+CGG - chr8.1:61593036-61593055 MS.gene063902:CDS 50.0%
GAACAAAGGGTAGAGGTTGG+GGG - chr8.1:61594394-61594413 MS.gene063902:CDS 50.0%
GAACTCGTACCACCAACAAC+CGG + chr8.1:61593283-61593302 None:intergenic 50.0%
GAAGAACAAAACTCGCGAGC+CGG - chr8.1:61593261-61593280 MS.gene063902:CDS 50.0%
GAAGGCTGCACTAGACCAAA+AGG + chr8.1:61594162-61594181 None:intergenic 50.0%
GAGGTAGCAGTGCCTTTAGA+AGG - chr8.1:61594838-61594857 MS.gene063902:CDS 50.0%
GCAGGTTCCTGTACAAGGAA+TGG - chr8.1:61594015-61594034 MS.gene063902:CDS 50.0%
GGGGTTTCCTCAGCTTCTTT+CGG + chr8.1:61593007-61593026 None:intergenic 50.0%
TCCTCAGCTTCTTTCGGAAG+AGG + chr8.1:61593001-61593020 None:intergenic 50.0%
TCCTCTTCCGAAAGAAGCTG+AGG - chr8.1:61592997-61593016 MS.gene063902:CDS 50.0%
TGGTGCCTGGGATTGAGATT+GGG - chr8.1:61593518-61593537 MS.gene063902:CDS 50.0%
TGTAACACAGCATGTGTCCC+AGG - chr8.1:61594195-61594214 MS.gene063902:CDS 50.0%
TTGGCTCAAAAGTGGAAGGC+AGG - chr8.1:61593997-61594016 MS.gene063902:CDS 50.0%
! CTTTGGACAGAAGTGCACAG+CGG - chr8.1:61593788-61593807 MS.gene063902:CDS 50.0%
! GCGTTAAGCGTTGTTTCGTC+AGG - chr8.1:61593649-61593668 MS.gene063902:CDS 50.0%
! TGCTTTCACCGGCGTTTTCT+CGG + chr8.1:61593047-61593066 None:intergenic 50.0%
!! GCAAAGTGCCGTGGTTTCTT+TGG - chr8.1:61594885-61594904 MS.gene063902:CDS 50.0%
!! TGCACTTGCTATCAAGCGTG+CGG - chr8.1:61593429-61593448 MS.gene063902:CDS 50.0%
AAAACTCGCGAGCCGGTTGT+TGG - chr8.1:61593268-61593287 MS.gene063902:CDS 55.0%
ACCTCCAGCATGACCAGCAT+GGG + chr8.1:61594823-61594842 None:intergenic 55.0%
GAAAGAGGGAAATCTGGCGG+TGG - chr8.1:61593913-61593932 MS.gene063902:CDS 55.0%
GGAAGGCAGGTTCCTGTACA+AGG - chr8.1:61594010-61594029 MS.gene063902:CDS 55.0%
GGTGCCTGGGATTGAGATTG+GGG - chr8.1:61593519-61593538 MS.gene063902:CDS 55.0%
GTGGTGCCTGGGATTGAGAT+TGG - chr8.1:61593517-61593536 MS.gene063902:CDS 55.0%
TACCTCCAGCATGACCAGCA+TGG + chr8.1:61594824-61594843 None:intergenic 55.0%
! GGAGTCACTTTGGCAGCAAC+AGG + chr8.1:61593094-61593113 None:intergenic 55.0%
ACCCATGCTGGTCATGCTGG+AGG - chr8.1:61594819-61594838 MS.gene063902:CDS 60.0%
AGGTTGGGGGCTTCGAACAC+TGG - chr8.1:61594407-61594426 MS.gene063902:CDS 60.0%
!! GCTGCTGCTGCTGCTTTCAC+CGG + chr8.1:61593058-61593077 None:intergenic 60.0%
!! TGTGGGTCAGCAAAGTGCCG+TGG - chr8.1:61594876-61594895 MS.gene063902:CDS 60.0%
ACTCGCGAGCCGGTTGTTGG+TGG - chr8.1:61593271-61593290 MS.gene063902:CDS 65.0%
AGAAGAGCGGGCGTGGTGCC+TGG - chr8.1:61593505-61593524 MS.gene063902:CDS 70.0%
CACGAGGAGAAGAGCGGGCG+TGG - chr8.1:61593498-61593517 MS.gene063902:CDS 70.0%
GAAGAGCGGGCGTGGTGCCT+GGG - chr8.1:61593506-61593525 MS.gene063902:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 61592818 61594911 61592818 ID=MS.gene063902
chr8.1 mRNA 61592818 61594911 61592818 ID=MS.gene063902.t1;Parent=MS.gene063902
chr8.1 exon 61592818 61594911 61592818 ID=MS.gene063902.t1.exon1;Parent=MS.gene063902.t1
chr8.1 CDS 61592818 61594911 61592818 ID=cds.MS.gene063902.t1;Parent=MS.gene063902.t1
Gene Sequence

>MS.gene063902

ATGGAAGAACAACACAACAACAACACTGCTTCAGATTCATTTGACAAATCTAAGATTGTTGAAGTCAAGCCCTTACGTAGTTTAGCACCTGTTTTACCAAAATATGTTCAATCTGCGTTTTCTGGTGGATACCCATCTGGGTTTCCTCCATTTTACTCATTTGTCAAACCCCATCAAATTCCTCTTCCGAAAGAAGCTGAGGAAACCCCTGTTGATGTCAAAGTAGCCGAGAAAACGCCGGTGAAAGCAGCAGCAGCAGCAGCTCATGACACTCCTGTTGCTGCCAAAGTGACTCCAATAAGGGTCTACAAGAGTTCACATGATGAAGAAATGAATCAACAAGGCTATGGAGATAGCGACGATTATTCGGAAGGGTTTGTAGGTGATAAACGAAAGCGTAGTACGGATAATATTGAGAATTGCAAAGAGTTTCTTAAAAGGAAGAAGAACAAAACTCGCGAGCCGGTTGTTGGTGGTACGAGTTCTTATGTTGGTGTTAACCCGACACTAAAAGATGATGGTGATAGGGAGTCAGTTAATCATGTGCTTATGACGTTTGATTCAATTCGAAGGAGGCTATGCCAACTTGAAGAGTCGAAGGAACTAAACAATGCACTTGCTATCAAGCGTGCGGATCTAAGAGCGAGTAATGCTTTGACTTGTAAAGGGTTTAAAACAAACACGAGGAGAAGAGCGGGCGTGGTGCCTGGGATTGAGATTGGGGATGTTTTCTTTTTTCGAATGGAAATGTGTCTTGTGGGTTTGCATGCTCAATCAATGGGTGGAATTGATTATATGAGTATCAAGGATGGATCTAAGGAGGATACTGTGGCGTTAAGCGTTGTTTCGTCAGGTGTATATGGTGATGATACAGAGGATAATAATGTTTTAATTTATAGTGGTCAGGGTGAGAATTTCAACAAGAAAGATAAACATGTGACTGATCAGAAGCTTCAAAGAGGTAATCTTGCTTTGGACAGAAGTGCACAGCGGCACGATGAAGTTAGAGTCATTCGAGGCGTGAGAGATCCTGTGAATAGAAGTTCAAAAATCTATATGTATGATGGTTTATATAAAATCCAAGATTCTTGGATTGAAAGAGGGAAATCTGGCGGTGGTATATTTAAGTATAAGTTGGTAAGGTTACCTGGTCAAAAAATTGCTTATGCTGCTTGGAAATTGGCTCAAAAGTGGAAGGCAGGTTCCTGTACAAGGAATGGTTTTATTCTTGCTGATCTCTCCAATGGGGTTGAAAGTATTCCAGTATCACTTGTCAATGATGTCGATGATGAGAAGGGTCCTGCTTTTTTCACTTATTTCACGTCTCTCAAAAACCCGAAACCTTTTGGTCTAGTGCAGCCTTCTTTAAGCTGCAATTGTAACACAGCATGTGTCCCAGGTGATTTGAACTGTTCATGCATTCAAAGAAATGAGGGTGATTTTCCGTATACTGCAAATAGTATTCTAGTGAGTCGGAAGCCGCTTATTCATGAATGTGGCCCTATGTGTCGGTGTTTTCCTACCTGCAAAAATCGAGTATCACAGACTGGTTTAAAACAACACATGGAAGTGTTCAGAACAAAGGGTAGAGGTTGGGGGCTTCGAACACTGGATCCTATACGTGCTGGTACTTTTATTTGTGAGTATGCAGGAGAAGTTATTAACAGAGCCAAGGTATATCAGAATGTTGAAGGAGATAATGACGAATATGTTTTTGATACAAGCCGTATTTATGAACCATTCAAGTGGAATTATGAACCTAGCTTACTGGAAGATGTAAGTTCAAATGTATGTAGTGAGGATTATACTATACCATCTCCTCTAATTATAAGTGCCAAGAATGTGGGAAATATAGCTAGATTCATGAATCATAGTTGCTCCCCAAATGTTTTTTGGCAGCCAGTCTTATATGCGGAAAATAATCAATCCTTTATCCACATTGCATTTTTTGCCCTTAGACATATTCCTCCAATGGCAGAGTTAACATATGATTATGGAATTACCCATGCTGGTCATGCTGGAGGTAGCAGTGCCTTTAGAAGGAGAAAGAAATGCTTGTGTGGGTCAGCAAAGTGCCGTGGTTTCTTTGGTTAA
Protein sequence

>MS.gene063902.t1

MEEQHNNNTASDSFDKSKIVEVKPLRSLAPVLPKYVQSAFSGGYPSGFPPFYSFVKPHQIPLPKEAEETPVDVKVAEKTPVKAAAAAAHDTPVAAKVTPIRVYKSSHDEEMNQQGYGDSDDYSEGFVGDKRKRSTDNIENCKEFLKRKKNKTREPVVGGTSSYVGVNPTLKDDGDRESVNHVLMTFDSIRRRLCQLEESKELNNALAIKRADLRASNALTCKGFKTNTRRRAGVVPGIEIGDVFFFRMEMCLVGLHAQSMGGIDYMSIKDGSKEDTVALSVVSSGVYGDDTEDNNVLIYSGQGENFNKKDKHVTDQKLQRGNLALDRSAQRHDEVRVIRGVRDPVNRSSKIYMYDGLYKIQDSWIERGKSGGGIFKYKLVRLPGQKIAYAAWKLAQKWKAGSCTRNGFILADLSNGVESIPVSLVNDVDDEKGPAFFTYFTSLKNPKPFGLVQPSLSCNCNTACVPGDLNCSCIQRNEGDFPYTANSILVSRKPLIHECGPMCRCFPTCKNRVSQTGLKQHMEVFRTKGRGWGLRTLDPIRAGTFICEYAGEVINRAKVYQNVEGDNDEYVFDTSRIYEPFKWNYEPSLLEDVSSNVCSEDYTIPSPLIISAKNVGNIARFMNHSCSPNVFWQPVLYAENNQSFIHIAFFALRHIPPMAELTYDYGITHAGHAGGSSAFRRRKKCLCGSAKCRGFFG