AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene97133

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene97133.t1 MTR_3g011440 96.090 665 22 3 1 662 1 664 0.0 1325
MS.gene97133.t1 MTR_8g042750 59.652 689 231 8 15 661 4 687 0.0 842
MS.gene97133.t1 MTR_7g088370 46.332 736 288 18 1 661 1 704 0.0 626
MS.gene97133.t1 MTR_5g013420 41.296 540 296 13 125 661 567 1088 6.46e-122 389
MS.gene97133.t1 MTR_5g013420 41.450 538 294 13 125 659 567 1086 7.93e-122 389
MS.gene97133.t1 MTR_4g010830 39.630 540 304 14 125 661 459 979 1.94e-112 361
MS.gene97133.t1 MTR_8g070075 40.546 476 251 12 172 631 290 749 9.22e-110 348
MS.gene97133.t1 MTR_8g070070 41.239 468 255 12 174 631 299 756 1.89e-109 348
MS.gene97133.t1 MTR_1g035420 37.058 537 299 14 108 631 135 645 1.19e-106 337
MS.gene97133.t1 MTR_8g071030 40.179 448 247 9 194 631 300 736 5.71e-104 333
MS.gene97133.t1 MTR_4g010550 38.277 499 255 15 166 661 15 463 4.31e-98 309
MS.gene97133.t1 MTR_6g061270 36.884 507 288 14 171 657 195 689 1.60e-92 301
MS.gene97133.t1 MTR_7g084090 36.561 506 296 11 169 657 255 752 3.01e-91 300
MS.gene97133.t1 MTR_1g035400 34.766 512 300 14 139 631 68 564 5.56e-91 294
MS.gene97133.t1 MTR_6g044690 34.535 527 292 14 139 633 60 565 2.55e-89 289
MS.gene97133.t1 MTR_6g061200 35.130 501 276 13 171 657 195 660 6.77e-86 283
MS.gene97133.t1 MTR_0376s0030 35.400 500 287 13 145 633 89 563 8.27e-85 278
MS.gene97133.t1 MTR_6g043960 32.520 492 280 14 155 633 31 483 4.34e-71 239
MS.gene97133.t1 MTR_7g084090 38.547 358 206 7 169 515 255 609 2.00e-69 239
MS.gene97133.t1 MTR_1g048950 34.350 492 260 13 189 661 85 532 7.50e-67 229
MS.gene97133.t1 MTR_2g054460 31.055 512 281 12 139 633 9 465 2.11e-65 223
MS.gene97133.t1 MTR_7g445710 29.927 548 272 20 135 657 78 538 9.91e-59 207
MS.gene97133.t1 MTR_7g445530 29.942 521 254 19 135 630 78 512 5.86e-56 199
MS.gene97133.t1 MTR_7g450730 29.032 527 269 17 135 657 75 500 9.06e-55 195
MS.gene97133.t1 MTR_7g052480 31.680 363 211 12 302 657 219 551 2.08e-40 156
MS.gene97133.t1 MTR_1g080340 27.596 337 171 10 372 657 267 581 2.53e-31 129
MS.gene97133.t1 MTR_5g018850 31.579 323 167 10 370 661 1207 1506 3.98e-30 127
MS.gene97133.t1 MTR_8g078490 30.303 330 169 10 361 657 947 1248 1.28e-29 126
MS.gene97133.t1 MTR_8g078505 28.923 325 177 9 359 657 237 533 1.98e-28 120
MS.gene97133.t1 MTR_1g069570 28.274 336 169 10 372 657 428 741 4.78e-28 120
MS.gene97133.t1 MTR_4g132610 34.234 222 114 5 445 661 852 1046 1.55e-25 113
MS.gene97133.t1 MTR_7g098390 27.576 330 173 7 374 657 388 697 9.79e-25 110
MS.gene97133.t1 MTR_7g445600 35.065 154 59 2 477 630 243 355 1.57e-23 103
MS.gene97133.t1 MTR_7g445600 32.335 167 92 7 135 300 74 220 1.81e-11 66.6
MS.gene97133.t1 MTR_1g069570 26.966 267 128 8 372 589 428 676 9.26e-18 87.8
MS.gene97133.t1 MTR_1g098370 30.964 197 97 7 462 657 75 233 3.28e-16 82.4
MS.gene97133.t1 MTR_1g098000 30.964 197 97 7 462 657 72 230 5.42e-16 81.6
MS.gene97133.t1 MTR_6g059310 27.551 196 99 4 459 645 87 248 3.91e-15 77.8
MS.gene97133.t1 MTR_6g059310 27.551 196 99 4 459 645 87 248 4.01e-15 77.8
MS.gene97133.t1 MTR_0071s0100 30.256 195 95 5 463 657 191 344 7.86e-14 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene97133.t1 AT5G04940 56.419 592 238 7 70 661 98 669 0.0 688
MS.gene97133.t1 AT5G04940 56.419 592 238 7 70 661 98 669 0.0 688
MS.gene97133.t1 AT1G73100 51.032 678 295 9 6 661 6 668 0.0 684
MS.gene97133.t1 AT1G17770 43.178 579 296 12 98 662 134 693 4.43e-153 459
MS.gene97133.t1 AT2G24740 44.917 541 252 14 129 661 252 754 1.02e-146 444
MS.gene97133.t1 AT2G35160 37.415 588 314 17 80 661 218 757 3.64e-111 352
MS.gene97133.t1 AT2G35160 37.415 588 314 17 80 661 254 793 1.56e-110 352
MS.gene97133.t1 AT2G35160 37.415 588 314 17 80 661 254 793 1.56e-110 352
MS.gene97133.t1 AT2G35160 37.415 588 314 17 80 661 254 793 1.56e-110 352
MS.gene97133.t1 AT2G35160 37.415 588 314 17 80 661 254 793 1.56e-110 352
MS.gene97133.t1 AT4G13460 38.812 505 285 11 139 631 145 637 3.70e-108 341
MS.gene97133.t1 AT4G13460 38.812 505 285 11 139 631 145 637 3.70e-108 341
MS.gene97133.t1 AT2G33290 38.583 508 279 8 139 631 149 638 9.17e-106 335
MS.gene97133.t1 AT2G33290 38.583 508 279 8 139 631 149 638 9.17e-106 335
MS.gene97133.t1 AT2G33290 38.583 508 279 8 139 631 149 638 9.17e-106 335
MS.gene97133.t1 AT2G33290 38.583 508 279 8 139 631 149 638 9.17e-106 335
MS.gene97133.t1 AT2G22740 37.406 532 304 13 139 657 270 785 1.68e-104 335
MS.gene97133.t1 AT2G22740 37.406 532 304 13 139 657 270 785 1.68e-104 335
MS.gene97133.t1 AT5G13960 36.008 486 279 14 192 657 12 485 2.88e-90 290
MS.gene97133.t1 AT5G13960 35.098 510 299 14 168 657 122 619 2.42e-89 291
MS.gene97133.t1 AT2G05900 41.176 221 121 4 212 428 1 216 5.61e-45 163
MS.gene97133.t1 AT2G05900 55.294 85 29 1 577 661 236 311 2.68e-24 104
MS.gene97133.t1 AT5G47150 41.589 214 113 5 139 347 118 324 1.09e-41 154
MS.gene97133.t1 AT3G04380 27.246 334 175 8 372 657 117 430 1.81e-34 137
MS.gene97133.t1 AT3G04380 27.246 334 175 8 372 657 144 457 1.97e-34 137
MS.gene97133.t1 AT5G47160 38.153 249 141 7 103 344 166 408 2.04e-34 136
MS.gene97133.t1 AT5G47160 38.153 249 141 7 103 344 166 408 2.04e-34 136
MS.gene97133.t1 AT5G47160 38.153 249 141 7 103 344 166 408 2.04e-34 136
MS.gene97133.t1 AT3G04380 27.246 334 175 8 372 657 128 441 2.07e-34 137
MS.gene97133.t1 AT3G04380 27.246 334 175 8 372 657 144 457 2.57e-34 137
MS.gene97133.t1 AT3G04380 27.246 334 175 8 372 657 117 430 2.60e-34 137
MS.gene97133.t1 AT3G04380 27.246 334 175 8 372 657 101 414 2.73e-34 136
MS.gene97133.t1 AT2G23740 31.988 322 166 15 368 662 1087 1382 2.12e-31 132
MS.gene97133.t1 AT2G23740 31.988 322 166 15 368 662 1087 1382 2.12e-31 132
MS.gene97133.t1 AT2G23740 31.988 322 166 15 368 662 1087 1382 2.12e-31 132
MS.gene97133.t1 AT2G23740 31.988 322 166 15 368 662 1080 1375 2.14e-31 132
MS.gene97133.t1 AT1G04050 29.464 336 163 12 372 657 303 614 3.80e-29 123
MS.gene97133.t1 AT1G04050 29.970 337 160 14 372 657 407 718 4.55e-29 123
MS.gene97133.t1 AT1G04050 29.970 337 160 14 372 657 407 718 4.55e-29 123
MS.gene97133.t1 AT5G43990 27.976 336 165 12 372 657 373 681 5.96e-28 120
MS.gene97133.t1 AT5G43990 27.976 336 165 12 372 657 373 681 5.96e-28 120
MS.gene97133.t1 AT5G43990 27.976 336 165 12 372 657 373 681 5.96e-28 120
MS.gene97133.t1 AT5G43990 27.976 336 165 12 372 657 373 681 5.96e-28 120
MS.gene97133.t1 AT5G43990 27.976 336 165 12 372 657 393 701 6.14e-28 120
MS.gene97133.t1 AT5G43990 27.976 336 165 12 372 657 393 701 6.14e-28 120
MS.gene97133.t1 AT5G43990 27.976 336 165 12 372 657 393 701 6.14e-28 120
MS.gene97133.t1 AT5G43990 27.976 336 165 12 372 657 393 701 6.14e-28 120
MS.gene97133.t1 AT5G43990 27.976 336 165 12 372 657 396 704 6.53e-28 120
MS.gene97133.t1 AT5G43990 27.976 336 165 12 372 657 396 704 6.53e-28 120
MS.gene97133.t1 AT5G43990 27.976 336 165 12 372 657 416 724 6.73e-28 120
MS.gene97133.t1 AT5G43990 27.976 336 165 12 372 657 416 724 6.73e-28 120
MS.gene97133.t1 AT5G43990 27.976 336 165 12 372 657 304 612 6.84e-28 119
MS.gene97133.t1 AT5G43990 27.976 336 165 12 372 657 324 632 7.12e-28 119
MS.gene97133.t1 AT5G43990 27.976 336 165 12 372 657 324 632 7.12e-28 119
MS.gene97133.t1 AT5G43990 27.976 336 165 12 372 657 324 632 7.12e-28 119
MS.gene97133.t1 AT5G43990 27.976 336 165 12 372 657 324 632 7.12e-28 119
MS.gene97133.t1 AT3G03750 33.624 229 126 8 435 661 145 349 8.68e-24 103
MS.gene97133.t1 AT2G23740 32.932 249 119 14 368 589 1087 1314 2.53e-21 100
MS.gene97133.t1 AT2G23740 32.932 249 119 14 368 589 1087 1314 2.53e-21 100
MS.gene97133.t1 AT3G03750 30.396 227 120 8 435 661 145 333 2.35e-17 84.3
MS.gene97133.t1 AT1G77300 30.412 194 98 6 466 659 1008 1164 3.24e-14 77.0
MS.gene97133.t1 AT1G77300 30.412 194 98 6 466 659 1008 1164 4.08e-14 77.0
MS.gene97133.t1 AT4G30860 29.442 197 98 5 463 659 307 462 7.74e-13 71.6
MS.gene97133.t1 AT3G59960 28.814 177 81 6 485 650 112 254 1.68e-11 65.9
MS.gene97133.t1 AT3G59960 28.814 177 81 6 485 650 112 254 1.68e-11 65.9
MS.gene97133.t1 AT3G59960 28.814 177 81 6 485 650 112 254 1.68e-11 65.9
MS.gene97133.t1 AT3G59960 28.814 177 81 6 485 650 112 254 4.16e-11 65.5

Find 169 sgRNAs with CRISPR-Local

Find 197 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCAGGTCAGTATCCTTC+TGG 0.204050 3.2:-5405272 MS.gene97133:CDS
ACAGGTATCAAACTTCTTAT+AGG 0.235001 3.2:+5405320 None:intergenic
CGACTCCACTTCAAGCATTT+AGG 0.258428 3.2:-5405181 MS.gene97133:CDS
CAAGCATTTAGGAGCCCTTT+TGG 0.274971 3.2:-5405170 MS.gene97133:CDS
CATTGACAAGTATAAGATTC+TGG 0.293840 3.2:-5405351 MS.gene97133:CDS
AGAGTGGAAATATGTGAAAA+AGG 0.306165 3.2:+5404206 None:intergenic
TGCATTAAACTGAATGATTT+CGG 0.306178 3.2:+5404174 None:intergenic
CATGAGTTAACATATGATTA+TGG 0.312052 3.2:-5403526 MS.gene97133:CDS
TGTATAAAATTCAAGATTCA+TGG 0.343226 3.2:-5404440 MS.gene97133:CDS
TTCTTAGCATTTATAATAAG+AGG 0.346128 3.2:+5403682 None:intergenic
AGCATGTGTCCCTGGCGATT+TGG 0.346957 3.2:-5404118 MS.gene97133:CDS
AGAACTCCATTGATAATATA+CGG 0.356399 3.2:+5404060 None:intergenic
CGAATGGAAATGTGTGTTAT+CGG 0.357207 3.2:-5404771 MS.gene97133:CDS
CTTCAGGTCAGTATCCTTCT+GGG 0.359790 3.2:-5405271 MS.gene97133:CDS
AACCTAGTGCCTTTGCCGTT+TGG 0.360454 3.2:-5404356 MS.gene97133:CDS
GTATATTATCAATGGAGTTC+TGG 0.362491 3.2:-5404058 MS.gene97133:CDS
TTTGGTGCTTCAAACCGGTT+TGG 0.365259 3.2:+5403962 None:intergenic
AGGATAAAGGTTGGGGTCTT+CGG 0.367552 3.2:-5403921 MS.gene97133:CDS
TCATAAGGGTAATCTTGCTT+TGG 0.385063 3.2:-5404556 MS.gene97133:CDS
CAAAACAAAGGATAAAGGTT+GGG 0.388648 3.2:-5403929 MS.gene97133:CDS
TTGGTGCTTCAAACCGGTTT+GGG 0.391461 3.2:+5403963 None:intergenic
AATCCTCAAGGTCAATCTTC+AGG 0.392097 3.2:-5405287 MS.gene97133:CDS
TGTTATAATTTATACCGGTC+AGG 0.396575 3.2:-5404625 MS.gene97133:CDS
TGTGTTTGTTCGAATTCCTT+TGG 0.402301 3.2:+5404848 None:intergenic
GATTGATGCCTTGCATATCC+AGG 0.403598 3.2:-5404724 MS.gene97133:CDS
ACTTGAAAGATTCATAAATA+CGG 0.407062 3.2:+5403776 None:intergenic
CGAACCCGTGTTCCATTCCT+TGG 0.408033 3.2:+5404911 None:intergenic
CAGTACCTGGAGTTGAGATT+GGG 0.418871 3.2:-5404809 MS.gene97133:CDS
ACAGGCTGCCAGAAAACATT+TGG 0.419329 3.2:+5403619 None:intergenic
ATTTGGACTGCTCATGCATT+CGG 0.422721 3.2:-5404101 MS.gene97133:CDS
TACCATTGTCTCTTTGACCT+GGG 0.423334 3.2:+5405006 None:intergenic
TCAGTACCTGGAGTTGAGAT+TGG 0.424381 3.2:-5404810 MS.gene97133:CDS
TTCCATTTGGTGCTTCAAAC+CGG 0.425045 3.2:+5403957 None:intergenic
CGGTTTGCATGCTCAATCCA+TGG 0.428182 3.2:-5404751 MS.gene97133:CDS
ATTATAAATGCTAAGAATGT+TGG 0.437154 3.2:-5403676 MS.gene97133:CDS
CATCGCTCTACTTGGCTTTG+CGG 0.438113 3.2:+5405205 None:intergenic
GCTGTTAGCATTGTTTCGTC+AGG 0.439867 3.2:-5404678 MS.gene97133:CDS
AGAATAAGTCCAGTCCTTGC+AGG 0.449322 3.2:+5404303 None:intergenic
AAGGTTGGGGTCTTCGGTCA+TGG 0.451618 3.2:-5403915 MS.gene97133:CDS
GCTGGTTTCCCTGCAAGGAC+TGG 0.456055 3.2:-5404312 MS.gene97133:CDS
ATAAAAGCACCAGCACGAAT+AGG 0.460396 3.2:+5403889 None:intergenic
TTACCATTGTCTCTTTGACC+TGG 0.461172 3.2:+5405005 None:intergenic
GTGTTCAAAACAAAGGATAA+AGG 0.462890 3.2:-5403934 MS.gene97133:CDS
CGATAACACACATTTCCATT+CGG 0.476797 3.2:+5404772 None:intergenic
TATTCTTGCTGACCTCTCCT+CGG 0.477270 3.2:-5404286 MS.gene97133:CDS
AGATCCTCATCCTCTCCAAA+AGG 0.481832 3.2:+5405155 None:intergenic
GTATCATGAGGTCCACCAAA+TGG 0.483316 3.2:+5405233 None:intergenic
CTTGAAAGATTCATAAATAC+GGG 0.486596 3.2:+5403777 None:intergenic
GTCAGATCAGAAGCTTCATA+AGG 0.487005 3.2:-5404571 MS.gene97133:CDS
CATGAGCAGTCCAAATCGCC+AGG 0.488074 3.2:+5404108 None:intergenic
ACTTCATTGACAAGGGATAC+AGG 0.490029 3.2:+5404249 None:intergenic
GTTGATATGAGTGGTTTAGT+TGG 0.492160 3.2:-5405035 MS.gene97133:CDS
ACTGCTACCCTCGGTATGAT+TGG 0.492178 3.2:+5403492 None:intergenic
TCAACATTCAGTTCCTCCCC+CGG 0.493458 3.2:-5405378 MS.gene97133:CDS
TTGTTCTCTTCATATAAGAC+AGG 0.494732 3.2:+5403601 None:intergenic
CAGAATCTTATACTTGTCAA+TGG 0.495015 3.2:+5405352 None:intergenic
TGCATATCCAGGGTGACCGC+GGG 0.500357 3.2:-5404713 MS.gene97133:CDS
GGTTTGCATGCTCAATCCAT+GGG 0.501866 3.2:-5404750 MS.gene97133:CDS
TCACAGCATCTTTGATGCCT+CGG 0.503981 3.2:+5404496 None:intergenic
TATCATGAGGTCCACCAAAT+GGG 0.505449 3.2:+5405234 None:intergenic
AACCGGTTTGAAGCACCAAA+TGG 0.508329 3.2:-5403959 MS.gene97133:CDS
TCTGTTCAGAAGTGGAAAGC+TGG 0.508734 3.2:-5404330 MS.gene97133:CDS
TCATGGGATCCTATTCGTGC+TGG 0.510420 3.2:-5403898 MS.gene97133:CDS
ATCAAAGATGCTGTGACTCC+AGG 0.511194 3.2:-5404489 MS.gene97133:CDS
GGTGATGTTATAATTTATAC+CGG 0.512209 3.2:-5404630 MS.gene97133:CDS
TATCTTCCCCGCGGTCACCC+TGG 0.516259 3.2:+5404706 None:intergenic
ATTCTTGCTGACCTCTCCTC+GGG 0.517115 3.2:-5404285 MS.gene97133:CDS
TCAATGGAGTTCTGGCGAAT+CGG 0.519477 3.2:-5404050 MS.gene97133:CDS
GCACAGTATTAACAACTTCA+CGG 0.519655 3.2:+5404982 None:intergenic
GTATAAAATTCAAGATTCAT+GGG 0.521482 3.2:-5404439 MS.gene97133:CDS
AGGTTGGGGTCTTCGGTCAT+GGG 0.522878 3.2:-5403914 MS.gene97133:CDS
GTGAATTGTATGATGGAAGA+AGG 0.523472 3.2:-5405407 None:intergenic
TATAAGTTGATAAGAGTGCC+TGG 0.523531 3.2:-5404381 MS.gene97133:CDS
TGACCGCGGGGAAGATACTT+TGG 0.527412 3.2:-5404700 MS.gene97133:CDS
GGTTTAGTTGGTATAAGCCC+AGG 0.529198 3.2:-5405023 MS.gene97133:CDS
TGCATGCTCAATCCATGGGG+GGG 0.529678 3.2:-5404746 MS.gene97133:CDS
AAACGTACCGATTTAAAAGC+TGG 0.530169 3.2:-5404885 MS.gene97133:CDS
GTTGAAATTCCCACCCTGAC+CGG 0.530593 3.2:+5404611 None:intergenic
TCATATGTTAACTCATGCAT+TGG 0.532861 3.2:+5403532 None:intergenic
CGGCAGCATCACATTCAAGC+CGG 0.533696 3.2:-5405097 MS.gene97133:CDS
TCAAAACAAAGGATAAAGGT+TGG 0.534159 3.2:-5403930 MS.gene97133:CDS
GGTAGAAAGAAATGCTTATG+TGG 0.534383 3.2:-5403460 MS.gene97133:CDS
TCAGATCAGAAGCTTCATAA+GGG 0.535931 3.2:-5404570 MS.gene97133:CDS
GGAGTCGGCATCGCTCTACT+TGG 0.540336 3.2:+5405197 None:intergenic
AAAACAAAGGATAAAGGTTG+GGG 0.541211 3.2:-5403928 MS.gene97133:CDS
CGTTATCGACTTCATTGACA+AGG 0.541988 3.2:+5404241 None:intergenic
GGCAATATTTGTATGACCAA+AGG 0.542268 3.2:-5404864 MS.gene97133:CDS
GGAAAGCTGGTTTCCCTGCA+AGG 0.545796 3.2:-5404317 MS.gene97133:CDS
GACTCTCGGCTCCCGAGGAG+AGG 0.546001 3.2:+5404274 None:intergenic
ATCTCAACTTGTAGATGCCA+AGG 0.547043 3.2:-5404928 MS.gene97133:CDS
ATGCAACATGGAGAAAGGAT+TGG 0.548940 3.2:+5403578 None:intergenic
TTCCAAACGGCAAAGGCACT+AGG 0.550397 3.2:+5404354 None:intergenic
GATCCTCATCCTCTCCAAAA+GGG 0.552939 3.2:+5405156 None:intergenic
AACTTGTAGATGCCAAGGAA+TGG 0.553451 3.2:-5404923 MS.gene97133:CDS
TTTGGAAATCTGTTCAGAAG+TGG 0.553589 3.2:-5404338 MS.gene97133:CDS
ATGTCCCCAATCTCAACTCC+AGG 0.554821 3.2:+5404804 None:intergenic
TCTTAGCATTTATAATAAGA+GGG 0.554977 3.2:+5403683 None:intergenic
GGCAGCATCACATTCAAGCC+GGG 0.555680 3.2:-5405096 MS.gene97133:CDS
GTATTTATGAATCTTTCAAG+TGG 0.556979 3.2:-5403774 MS.gene97133:CDS
GCAAAGGCACTAGGTTGTCC+AGG 0.558915 3.2:+5404363 None:intergenic
TTATACTTGTCAATGGAACC+CGG 0.562427 3.2:+5405359 None:intergenic
GGTCAGATTGAAGAAGCATA+AGG 0.562915 3.2:-5405075 MS.gene97133:CDS
TCACATAGTTGCAGCTGTAG+TGG 0.565201 3.2:-5404147 MS.gene97133:CDS
GCATTTATAATAAGAGGGTG+TGG 0.566087 3.2:+5403688 None:intergenic
CTAAATGCTTGAAGTGGAGT+CGG 0.566439 3.2:+5405182 None:intergenic
GAGAAGTTATCGATAAAGCT+AGG 0.566713 3.2:-5403852 MS.gene97133:CDS
GTTATAATTTATACCGGTCA+GGG 0.567735 3.2:-5404624 MS.gene97133:CDS
ATTTCGGATGTCTAAGAGAG+TGG 0.569188 3.2:+5404190 None:intergenic
AAGCCGTTGGTTCATGAATG+TGG 0.569854 3.2:-5404027 MS.gene97133:CDS
GAGGATCTCAATGACAATGA+TGG 0.572099 3.2:-5405140 MS.gene97133:CDS
TGTATGATGGAAGAAGGGTT+AGG 0.572411 3.2:-5405401 None:intergenic
TATGCTTCTTCAATCTGACC+CGG 0.573333 3.2:+5405078 None:intergenic
TCGAACAAACACAGCGAAGA+GGG 0.575127 3.2:-5404838 MS.gene97133:CDS
TTGCATATCCAGGGTGACCG+CGG 0.575259 3.2:-5404714 MS.gene97133:CDS
TTTGCGTGCACTGCTACCCT+CGG 0.576882 3.2:+5403483 None:intergenic
TATGTTAACTCATGCATTGG+TGG 0.577942 3.2:+5403535 None:intergenic
GCCTAAGTTACTAGAAGAAG+CGG 0.581948 3.2:-5403743 MS.gene97133:CDS
TTAAATCAGCTTGTACAAGA+AGG 0.586118 3.2:-5403829 MS.gene97133:CDS
AACAGATTTCCAAACGGCAA+AGG 0.589578 3.2:+5404347 None:intergenic
GGGCTCCTAAATGCTTGAAG+TGG 0.589829 3.2:+5405176 None:intergenic
AATGGAAGTGTTCAAAACAA+AGG 0.598701 3.2:-5403941 MS.gene97133:CDS
CTTCTGAACAGATTTCCAAA+CGG 0.599772 3.2:+5404341 None:intergenic
TATACTTGTCAATGGAACCC+GGG 0.600215 3.2:+5405360 None:intergenic
TGACCTGAAGATTGACCTTG+AGG 0.600787 3.2:+5405284 None:intergenic
GAATAAGTCCAGTCCTTGCA+GGG 0.601962 3.2:+5404304 None:intergenic
CATTTGATGCGCTAAGACGA+AGG 0.602005 3.2:-5404953 MS.gene97133:CDS
AAGAGGGTAGGATCAGTACC+TGG 0.602661 3.2:-5404822 MS.gene97133:CDS
GGGCCACATTCATGAACCAA+CGG 0.610204 3.2:+5404024 None:intergenic
GTTTGCATGCTCAATCCATG+GGG 0.610224 3.2:-5404749 MS.gene97133:CDS
TCTGGCGAATCGGAAGCCGT+TGG 0.612003 3.2:-5404040 MS.gene97133:CDS
TTGCATGCTCAATCCATGGG+GGG 0.612416 3.2:-5404747 MS.gene97133:CDS
TGCTAAGAATGTTGGAAATG+TGG 0.613562 3.2:-5403668 MS.gene97133:CDS
TGAATTGTATGATGGAAGAA+GGG 0.614843 3.2:-5405406 None:intergenic
GATGTTCATGTTGATATGAG+TGG 0.616806 3.2:-5405044 MS.gene97133:CDS
AGCCCAGGTCAAAGAGACAA+TGG 0.619161 3.2:-5405008 MS.gene97133:CDS
TAATTTATACCGGTCAGGGT+GGG 0.620279 3.2:-5404620 MS.gene97133:CDS
TTAGGAAAACACTGACATGT+GGG 0.620821 3.2:+5404003 None:intergenic
AAGGGATACAGGAAGACTCT+CGG 0.623134 3.2:+5404260 None:intergenic
GACCGTTCCAATCATACCGA+GGG 0.625961 3.2:-5403499 MS.gene97133:CDS
TACGACGATGAAGCTGAGGA+TGG 0.627250 3.2:-5404651 MS.gene97133:CDS
ACCGCTTCTTCTAGTAACTT+AGG 0.628944 3.2:+5403742 None:intergenic
AGGAAGACTCTCGGCTCCCG+AGG 0.629984 3.2:+5404269 None:intergenic
TACCCTCGGTATGATTGGAA+CGG 0.630497 3.2:+5403497 None:intergenic
GCGGTCACCCTGGATATGCA+AGG 0.632039 3.2:+5404716 None:intergenic
ACAAACACAGCGAAGAGGGT+AGG 0.634440 3.2:-5404834 MS.gene97133:CDS
CTACAGCTGCAACTATGTGA+AGG 0.634477 3.2:+5404150 None:intergenic
AGATGCCAAGGAATGGAACA+CGG 0.634880 3.2:-5404916 MS.gene97133:CDS
ATACTTGTCAATGGAACCCG+GGG 0.636158 3.2:+5405361 None:intergenic
ATTGATGCCTTGCATATCCA+GGG 0.637842 3.2:-5404723 MS.gene97133:CDS
GTTAGGAAAACACTGACATG+TGG 0.639912 3.2:+5404002 None:intergenic
AGAATACGACGATGAAGCTG+AGG 0.645222 3.2:-5404655 MS.gene97133:CDS
TTCGAACAAACACAGCGAAG+AGG 0.646517 3.2:-5404839 MS.gene97133:CDS
TTTGCATGCTCAATCCATGG+GGG 0.646538 3.2:-5404748 MS.gene97133:CDS
TTTGCGGTTGAAGTATCATG+AGG 0.649080 3.2:+5405221 None:intergenic
GATGCCAAGGAATGGAACAC+GGG 0.650308 3.2:-5404915 MS.gene97133:CDS
AGTACCTGGAGTTGAGATTG+GGG 0.657916 3.2:-5404808 MS.gene97133:CDS
TCATGCATTCGGAGAAACGA+AGG 0.659918 3.2:-5404090 MS.gene97133:CDS
TGTGGATCATCAAACTGCTG+CGG 0.667847 3.2:-5403442 MS.gene97133:CDS
ATAATTTATACCGGTCAGGG+TGG 0.675305 3.2:-5404621 MS.gene97133:CDS
GAGGGTAGCAGTGCACGCAA+AGG 0.681126 3.2:-5403481 MS.gene97133:CDS
GTTATCGACTTCATTGACAA+GGG 0.684235 3.2:+5404242 None:intergenic
ATGAGCAGTCCAAATCGCCA+GGG 0.685642 3.2:+5404109 None:intergenic
TAGGAAAACACTGACATGTG+GGG 0.688446 3.2:+5404004 None:intergenic
GGTCACAAATGAGTCTAGTG+AGG 0.695312 3.2:-5403722 MS.gene97133:CDS
TGACCGTTCCAATCATACCG+AGG 0.697564 3.2:-5403500 MS.gene97133:CDS
GCATATCCAGGGTGACCGCG+GGG 0.702296 3.2:-5404712 MS.gene97133:CDS
AATGAAATAAGAGTCATCCG+AGG 0.740934 3.2:-5404513 MS.gene97133:CDS
CAGCCAAAGTATCTTCCCCG+CGG 0.752822 3.2:+5404697 None:intergenic
TACTTGTCAATGGAACCCGG+GGG 0.840303 3.2:+5405362 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTTGAAAGATTCATAAATA+CGG + chr3.2:5405051-5405070 None:intergenic 20.0%
!! ATTATAAATGCTAAGAATGT+TGG - chr3.2:5405148-5405167 MS.gene97133:CDS 20.0%
!! GTATAAAATTCAAGATTCAT+GGG - chr3.2:5404385-5404404 MS.gene97133:CDS 20.0%
!! TCTTAGCATTTATAATAAGA+GGG + chr3.2:5405144-5405163 None:intergenic 20.0%
!! TGTATAAAATTCAAGATTCA+TGG - chr3.2:5404384-5404403 MS.gene97133:CDS 20.0%
!! TTCTTAGCATTTATAATAAG+AGG + chr3.2:5405145-5405164 None:intergenic 20.0%
! CATGAGTTAACATATGATTA+TGG - chr3.2:5405298-5405317 MS.gene97133:CDS 25.0%
! CTTGAAAGATTCATAAATAC+GGG + chr3.2:5405050-5405069 None:intergenic 25.0%
! GGTGATGTTATAATTTATAC+CGG - chr3.2:5404194-5404213 MS.gene97133:CDS 25.0%
! GTATTTATGAATCTTTCAAG+TGG - chr3.2:5405050-5405069 MS.gene97133:CDS 25.0%
! TGCATTAAACTGAATGATTT+CGG + chr3.2:5404653-5404672 None:intergenic 25.0%
!! AATATTGCCAGCTTTTAAAT+CGG + chr3.2:5403949-5403968 None:intergenic 25.0%
!! AGAACTCCATTGATAATATA+CGG + chr3.2:5404767-5404786 None:intergenic 25.0%
!! GATTTTCCGTATATTATCAA+TGG - chr3.2:5404758-5404777 MS.gene97133:CDS 25.0%
AAAAAATGCAACATGGAGAA+AGG + chr3.2:5405254-5405273 None:intergenic 30.0%
AAAACAAAGGATAAAGGTTG+GGG - chr3.2:5404896-5404915 MS.gene97133:CDS 30.0%
ACAGGTATCAAACTTCTTAT+AGG + chr3.2:5403507-5403526 None:intergenic 30.0%
AGAGTGGAAATATGTGAAAA+AGG + chr3.2:5404621-5404640 None:intergenic 30.0%
CAAAACAAAGGATAAAGGTT+GGG - chr3.2:5404895-5404914 MS.gene97133:CDS 30.0%
CAGAATCTTATACTTGTCAA+TGG + chr3.2:5403475-5403494 None:intergenic 30.0%
CATTGACAAGTATAAGATTC+TGG - chr3.2:5403473-5403492 MS.gene97133:CDS 30.0%
GCAAAAATCTATGTCTATGA+TGG - chr3.2:5404359-5404378 MS.gene97133:CDS 30.0%
GTATATTATCAATGGAGTTC+TGG - chr3.2:5404766-5404785 MS.gene97133:CDS 30.0%
GTGTTCAAAACAAAGGATAA+AGG - chr3.2:5404890-5404909 MS.gene97133:CDS 30.0%
GTTATAATTTATACCGGTCA+GGG - chr3.2:5404200-5404219 MS.gene97133:CDS 30.0%
TCAAAACAAAGGATAAAGGT+TGG - chr3.2:5404894-5404913 MS.gene97133:CDS 30.0%
TCAATGCAAAAAATGCAACA+TGG + chr3.2:5405261-5405280 None:intergenic 30.0%
TCATATGTTAACTCATGCAT+TGG + chr3.2:5405295-5405314 None:intergenic 30.0%
TGTTATAATTTATACCGGTC+AGG - chr3.2:5404199-5404218 MS.gene97133:CDS 30.0%
TTAAATCAGCTTGTACAAGA+AGG - chr3.2:5404995-5405014 MS.gene97133:CDS 30.0%
TTGTTCTCTTCATATAAGAC+AGG + chr3.2:5405226-5405245 None:intergenic 30.0%
! TTTTAGCAACAAAAGAAGTG+CGG - chr3.2:5403707-5403726 MS.gene97133:CDS 30.0%
!! AATGGAAGTGTTCAAAACAA+AGG - chr3.2:5404883-5404902 MS.gene97133:CDS 30.0%
!!! GTTTGATACCTGTTTTTTCA+AGG - chr3.2:5403514-5403533 MS.gene97133:CDS 30.0%
!!! TTGTTTTGAACACTTCCATT+TGG + chr3.2:5404883-5404902 None:intergenic 30.0%
AAAAATCGAGTATCCCAAAC+CGG - chr3.2:5404848-5404867 MS.gene97133:CDS 35.0%
AATGAAATAAGAGTCATCCG+AGG - chr3.2:5404311-5404330 MS.gene97133:CDS 35.0%
CGAATGGAAATGTGTGTTAT+CGG - chr3.2:5404053-5404072 MS.gene97133:CDS 35.0%
CGATAACACACATTTCCATT+CGG + chr3.2:5404055-5404074 None:intergenic 35.0%
CTTCTGAACAGATTTCCAAA+CGG + chr3.2:5404486-5404505 None:intergenic 35.0%
GAGAAGTTATCGATAAAGCT+AGG - chr3.2:5404972-5404991 MS.gene97133:CDS 35.0%
GATGTTCATGTTGATATGAG+TGG - chr3.2:5403780-5403799 MS.gene97133:CDS 35.0%
GCACAGTATTAACAACTTCA+CGG + chr3.2:5403845-5403864 None:intergenic 35.0%
GCATTTATAATAAGAGGGTG+TGG + chr3.2:5405139-5405158 None:intergenic 35.0%
GGCAATATTTGTATGACCAA+AGG - chr3.2:5403960-5403979 MS.gene97133:CDS 35.0%
GGTAGAAAGAAATGCTTATG+TGG - chr3.2:5405364-5405383 MS.gene97133:CDS 35.0%
GTTGATATGAGTGGTTTAGT+TGG - chr3.2:5403789-5403808 MS.gene97133:CDS 35.0%
TATGTTAACTCATGCATTGG+TGG + chr3.2:5405292-5405311 None:intergenic 35.0%
TCAGATCAGAAGCTTCATAA+GGG - chr3.2:5404254-5404273 MS.gene97133:CDS 35.0%
TCATAAGGGTAATCTTGCTT+TGG - chr3.2:5404268-5404287 MS.gene97133:CDS 35.0%
TGAGGATTCCTTGAAAAAAC+AGG + chr3.2:5403525-5403544 None:intergenic 35.0%
TGCTAAGAATGTTGGAAATG+TGG - chr3.2:5405156-5405175 MS.gene97133:CDS 35.0%
TGGAAATATGTGAAAAAGGC+AGG + chr3.2:5404617-5404636 None:intergenic 35.0%
TGTGTTTGTTCGAATTCCTT+TGG + chr3.2:5403979-5403998 None:intergenic 35.0%
TTAGGAAAACACTGACATGT+GGG + chr3.2:5404824-5404843 None:intergenic 35.0%
TTATACTTGTCAATGGAACC+CGG + chr3.2:5403468-5403487 None:intergenic 35.0%
TTTGGAAATCTGTTCAGAAG+TGG - chr3.2:5404486-5404505 MS.gene97133:CDS 35.0%
! GATACTCGATTTTTGCAGTT+AGG + chr3.2:5404842-5404861 None:intergenic 35.0%
! GGACATTTTCTTTTTCCGAA+TGG - chr3.2:5404037-5404056 MS.gene97133:CDS 35.0%
! TAGACATAGATTTTTGCACC+TGG + chr3.2:5404356-5404375 None:intergenic 35.0%
! TCATGGGTTGAAAAAGCAAA+AGG - chr3.2:5404401-5404420 MS.gene97133:CDS 35.0%
!! AAACGTACCGATTTAAAAGC+TGG - chr3.2:5403939-5403958 MS.gene97133:CDS 35.0%
!! GTTATCGACTTCATTGACAA+GGG + chr3.2:5404585-5404604 None:intergenic 35.0%
!! TATAAGTTGATAAGAGTGCC+TGG - chr3.2:5404443-5404462 MS.gene97133:CDS 35.0%
!! TTTTCTCCGTTTTTCCCATT+TGG - chr3.2:5403576-5403595 MS.gene97133:CDS 35.0%
!!! GTTTTTTCAAGGAATCCTCA+AGG - chr3.2:5403525-5403544 MS.gene97133:CDS 35.0%
AAAAACGGAGAAAACCCAGA+AGG + chr3.2:5403570-5403589 None:intergenic 40.0%
AACAGATTTCCAAACGGCAA+AGG + chr3.2:5404480-5404499 None:intergenic 40.0%
AACTTGTAGATGCCAAGGAA+TGG - chr3.2:5403901-5403920 MS.gene97133:CDS 40.0%
AATCCTCAAGGTCAATCTTC+AGG - chr3.2:5403537-5403556 MS.gene97133:CDS 40.0%
ACCGCTTCTTCTAGTAACTT+AGG + chr3.2:5405085-5405104 None:intergenic 40.0%
ACTTCATTGACAAGGGATAC+AGG + chr3.2:5404578-5404597 None:intergenic 40.0%
ATAATTTATACCGGTCAGGG+TGG - chr3.2:5404203-5404222 MS.gene97133:CDS 40.0%
ATCTCAACTTGTAGATGCCA+AGG - chr3.2:5403896-5403915 MS.gene97133:CDS 40.0%
ATGCAACATGGAGAAAGGAT+TGG + chr3.2:5405249-5405268 None:intergenic 40.0%
ATTGATGCCTTGCATATCCA+GGG - chr3.2:5404101-5404120 MS.gene97133:CDS 40.0%
ATTTCGGATGTCTAAGAGAG+TGG + chr3.2:5404637-5404656 None:intergenic 40.0%
ATTTGGACTGCTCATGCATT+CGG - chr3.2:5404723-5404742 MS.gene97133:CDS 40.0%
CTAAATGCTTGAAGTGGAGT+CGG + chr3.2:5403645-5403664 None:intergenic 40.0%
GAGGATCTCAATGACAATGA+TGG - chr3.2:5403684-5403703 MS.gene97133:CDS 40.0%
GCCTAAGTTACTAGAAGAAG+CGG - chr3.2:5405081-5405100 MS.gene97133:CDS 40.0%
GTCAGATCAGAAGCTTCATA+AGG - chr3.2:5404253-5404272 MS.gene97133:CDS 40.0%
GTTAGGAAAACACTGACATG+TGG + chr3.2:5404825-5404844 None:intergenic 40.0%
GTTGAAAAAGCAAAAGGAGG+TGG - chr3.2:5404407-5404426 MS.gene97133:CDS 40.0%
TAATTTATACCGGTCAGGGT+GGG - chr3.2:5404204-5404223 MS.gene97133:CDS 40.0%
TACCATTGTCTCTTTGACCT+GGG + chr3.2:5403821-5403840 None:intergenic 40.0%
TAGGAAAACACTGACATGTG+GGG + chr3.2:5404823-5404842 None:intergenic 40.0%
TATACTTGTCAATGGAACCC+GGG + chr3.2:5403467-5403486 None:intergenic 40.0%
TATCATGAGGTCCACCAAAT+GGG + chr3.2:5403593-5403612 None:intergenic 40.0%
TATGCTTCTTCAATCTGACC+CGG + chr3.2:5403749-5403768 None:intergenic 40.0%
TTACCATTGTCTCTTTGACC+TGG + chr3.2:5403822-5403841 None:intergenic 40.0%
! GGTCAGATTGAAGAAGCATA+AGG - chr3.2:5403749-5403768 MS.gene97133:CDS 40.0%
! GTTGCTCTCCAAATGTTTTC+TGG - chr3.2:5405197-5405216 MS.gene97133:CDS 40.0%
! TGGGTTGAAAAAGCAAAAGG+AGG - chr3.2:5404404-5404423 MS.gene97133:CDS 40.0%
! TTTGCGGTTGAAGTATCATG+AGG + chr3.2:5403606-5403625 None:intergenic 40.0%
!! ATAAAAGCACCAGCACGAAT+AGG + chr3.2:5404938-5404957 None:intergenic 40.0%
!! CGTTATCGACTTCATTGACA+AGG + chr3.2:5404586-5404605 None:intergenic 40.0%
!! GCTTTTATTTGCGAGTATGC+AGG - chr3.2:5404950-5404969 MS.gene97133:CDS 40.0%
!! TTCCATTTGGTGCTTCAAAC+CGG + chr3.2:5404870-5404889 None:intergenic 40.0%
AAGGGATACAGGAAGACTCT+CGG + chr3.2:5404567-5404586 None:intergenic 45.0%
ACAGGCTGCCAGAAAACATT+TGG + chr3.2:5405208-5405227 None:intergenic 45.0%
AGAATAAGTCCAGTCCTTGC+AGG + chr3.2:5404524-5404543 None:intergenic 45.0%
AGAATACGACGATGAAGCTG+AGG - chr3.2:5404169-5404188 MS.gene97133:CDS 45.0%
AGATCCTCATCCTCTCCAAA+AGG + chr3.2:5403672-5403691 None:intergenic 45.0%
AGATGCCAAGGAATGGAACA+CGG - chr3.2:5403908-5403927 MS.gene97133:CDS 45.0%
AGGATAAAGGTTGGGGTCTT+CGG - chr3.2:5404903-5404922 MS.gene97133:CDS 45.0%
AGTACCTGGAGTTGAGATTG+GGG - chr3.2:5404016-5404035 MS.gene97133:CDS 45.0%
ATACTTGTCAATGGAACCCG+GGG + chr3.2:5403466-5403485 None:intergenic 45.0%
ATCAAAGATGCTGTGACTCC+AGG - chr3.2:5404335-5404354 MS.gene97133:CDS 45.0%
CAGTACCTGGAGTTGAGATT+GGG - chr3.2:5404015-5404034 MS.gene97133:CDS 45.0%
CATTTGATGCGCTAAGACGA+AGG - chr3.2:5403871-5403890 MS.gene97133:CDS 45.0%
CGACTCCACTTCAAGCATTT+AGG - chr3.2:5403643-5403662 MS.gene97133:CDS 45.0%
CTACAGCTGCAACTATGTGA+AGG + chr3.2:5404677-5404696 None:intergenic 45.0%
CTTCAGGTCAGTATCCTTCT+GGG - chr3.2:5403553-5403572 MS.gene97133:CDS 45.0%
GAAAAAGCAAAAGGAGGTGG+TGG - chr3.2:5404410-5404429 MS.gene97133:CDS 45.0%
GAATAAGTCCAGTCCTTGCA+GGG + chr3.2:5404523-5404542 None:intergenic 45.0%
GATCCTCATCCTCTCCAAAA+GGG + chr3.2:5403671-5403690 None:intergenic 45.0%
GATTGATGCCTTGCATATCC+AGG - chr3.2:5404100-5404119 MS.gene97133:CDS 45.0%
GCTGTTAGCATTGTTTCGTC+AGG - chr3.2:5404146-5404165 MS.gene97133:CDS 45.0%
GGTCACAAATGAGTCTAGTG+AGG - chr3.2:5405102-5405121 MS.gene97133:CDS 45.0%
GGTCCACCAAATGGGAAAAA+CGG + chr3.2:5403585-5403604 None:intergenic 45.0%
GGTTTGCATGCTCAATCCAT+GGG - chr3.2:5404074-5404093 MS.gene97133:CDS 45.0%
GTATCATGAGGTCCACCAAA+TGG + chr3.2:5403594-5403613 None:intergenic 45.0%
GTTTGCATGCTCAATCCATG+GGG - chr3.2:5404075-5404094 MS.gene97133:CDS 45.0%
TACCCTCGGTATGATTGGAA+CGG + chr3.2:5405330-5405349 None:intergenic 45.0%
TATTCTTGCTGACCTCTCCT+CGG - chr3.2:5404538-5404557 MS.gene97133:CDS 45.0%
TCACAGCATCTTTGATGCCT+CGG + chr3.2:5404331-5404350 None:intergenic 45.0%
TCACATAGTTGCAGCTGTAG+TGG - chr3.2:5404677-5404696 MS.gene97133:CDS 45.0%
TCAGTACCTGGAGTTGAGAT+TGG - chr3.2:5404014-5404033 MS.gene97133:CDS 45.0%
TCATGCATTCGGAGAAACGA+AGG - chr3.2:5404734-5404753 MS.gene97133:CDS 45.0%
TCGAACAAACACAGCGAAGA+GGG - chr3.2:5403986-5404005 MS.gene97133:CDS 45.0%
TCTGTTCAGAAGTGGAAAGC+TGG - chr3.2:5404494-5404513 MS.gene97133:CDS 45.0%
TCTTCAGGTCAGTATCCTTC+TGG - chr3.2:5403552-5403571 MS.gene97133:CDS 45.0%
TGACCTGAAGATTGACCTTG+AGG + chr3.2:5403543-5403562 None:intergenic 45.0%
TGTGGATCATCAAACTGCTG+CGG - chr3.2:5405382-5405401 MS.gene97133:CDS 45.0%
TTCGAACAAACACAGCGAAG+AGG - chr3.2:5403985-5404004 MS.gene97133:CDS 45.0%
TTTGCATGCTCAATCCATGG+GGG - chr3.2:5404076-5404095 MS.gene97133:CDS 45.0%
! CAAGCATTTAGGAGCCCTTT+TGG - chr3.2:5403654-5403673 MS.gene97133:CDS 45.0%
! GGTAAAAAAGCATGTGTCCC+TGG - chr3.2:5404698-5404717 MS.gene97133:CDS 45.0%
! GGTTTAGTTGGTATAAGCCC+AGG - chr3.2:5403801-5403820 MS.gene97133:CDS 45.0%
! TCAATGGAGTTCTGGCGAAT+CGG - chr3.2:5404774-5404793 MS.gene97133:CDS 45.0%
! TTGGTGCTTCAAACCGGTTT+GGG + chr3.2:5404864-5404883 None:intergenic 45.0%
!! AACCGGTTTGAAGCACCAAA+TGG - chr3.2:5404865-5404884 MS.gene97133:CDS 45.0%
!! AAGCCGTTGGTTCATGAATG+TGG - chr3.2:5404797-5404816 MS.gene97133:CDS 45.0%
!! ATTTAGGAGCCCTTTTGGAG+AGG - chr3.2:5403659-5403678 MS.gene97133:CDS 45.0%
!! TCTCCGTTTTTCCCATTTGG+TGG - chr3.2:5403579-5403598 MS.gene97133:CDS 45.0%
!! TTTGGTGCTTCAAACCGGTT+TGG + chr3.2:5404865-5404884 None:intergenic 45.0%
AACCTAGTGCCTTTGCCGTT+TGG - chr3.2:5404468-5404487 MS.gene97133:CDS 50.0%
AAGAGGGTAGGATCAGTACC+TGG - chr3.2:5404002-5404021 MS.gene97133:CDS 50.0%
ACAAACACAGCGAAGAGGGT+AGG - chr3.2:5403990-5404009 MS.gene97133:CDS 50.0%
ACTGCTACCCTCGGTATGAT+TGG + chr3.2:5405335-5405354 None:intergenic 50.0%
AGCCCAGGTCAAAGAGACAA+TGG - chr3.2:5403816-5403835 MS.gene97133:CDS 50.0%
ATGAGCAGTCCAAATCGCCA+GGG + chr3.2:5404718-5404737 None:intergenic 50.0%
ATGTCCCCAATCTCAACTCC+AGG + chr3.2:5404023-5404042 None:intergenic 50.0%
ATTCTTGCTGACCTCTCCTC+GGG - chr3.2:5404539-5404558 MS.gene97133:CDS 50.0%
CGGTTTGCATGCTCAATCCA+TGG - chr3.2:5404073-5404092 MS.gene97133:CDS 50.0%
GACCGTTCCAATCATACCGA+GGG - chr3.2:5405325-5405344 MS.gene97133:CDS 50.0%
GATGCCAAGGAATGGAACAC+GGG - chr3.2:5403909-5403928 MS.gene97133:CDS 50.0%
GGGCCACATTCATGAACCAA+CGG + chr3.2:5404803-5404822 None:intergenic 50.0%
GGGCTCCTAAATGCTTGAAG+TGG + chr3.2:5403651-5403670 None:intergenic 50.0%
GTTGAAATTCCCACCCTGAC+CGG + chr3.2:5404216-5404235 None:intergenic 50.0%
TACGACGATGAAGCTGAGGA+TGG - chr3.2:5404173-5404192 MS.gene97133:CDS 50.0%
TACTTGTCAATGGAACCCGG+GGG + chr3.2:5403465-5403484 None:intergenic 50.0%
TCAACATTCAGTTCCTCCCC+CGG - chr3.2:5403446-5403465 MS.gene97133:CDS 50.0%
TCATGGGATCCTATTCGTGC+TGG - chr3.2:5404926-5404945 MS.gene97133:CDS 50.0%
TGACCGTTCCAATCATACCG+AGG - chr3.2:5405324-5405343 MS.gene97133:CDS 50.0%
TTGCATGCTCAATCCATGGG+GGG - chr3.2:5404077-5404096 MS.gene97133:CDS 50.0%
!! CATCGCTCTACTTGGCTTTG+CGG + chr3.2:5403622-5403641 None:intergenic 50.0%
!! TTCCAAACGGCAAAGGCACT+AGG + chr3.2:5404473-5404492 None:intergenic 50.0%
AAGGTTGGGGTCTTCGGTCA+TGG - chr3.2:5404909-5404928 MS.gene97133:CDS 55.0%
AGCATGTGTCCCTGGCGATT+TGG - chr3.2:5404706-5404725 MS.gene97133:CDS 55.0%
AGGTTGGGGTCTTCGGTCAT+GGG - chr3.2:5404910-5404929 MS.gene97133:CDS 55.0%
CAACATTCAGTTCCTCCCCC+GGG - chr3.2:5403447-5403466 MS.gene97133:CDS 55.0%
CATGAGCAGTCCAAATCGCC+AGG + chr3.2:5404719-5404738 None:intergenic 55.0%
CGAACCCGTGTTCCATTCCT+TGG + chr3.2:5403916-5403935 None:intergenic 55.0%
CGGCAGCATCACATTCAAGC+CGG - chr3.2:5403727-5403746 MS.gene97133:CDS 55.0%
GGCAGCATCACATTCAAGCC+GGG - chr3.2:5403728-5403747 MS.gene97133:CDS 55.0%
TGACCGCGGGGAAGATACTT+TGG - chr3.2:5404124-5404143 MS.gene97133:CDS 55.0%
TGCATGCTCAATCCATGGGG+GGG - chr3.2:5404078-5404097 MS.gene97133:CDS 55.0%
TTGCATATCCAGGGTGACCG+CGG - chr3.2:5404110-5404129 MS.gene97133:CDS 55.0%
TTTGCGTGCACTGCTACCCT+CGG + chr3.2:5405344-5405363 None:intergenic 55.0%
! CAGCCAAAGTATCTTCCCCG+CGG + chr3.2:5404130-5404149 None:intergenic 55.0%
! GGAAAGCTGGTTTCCCTGCA+AGG - chr3.2:5404507-5404526 MS.gene97133:CDS 55.0%
!! GAGCCCTTTTGGAGAGGATG+AGG - chr3.2:5403665-5403684 MS.gene97133:CDS 55.0%
!! GCAAAGGCACTAGGTTGTCC+AGG + chr3.2:5404464-5404483 None:intergenic 55.0%
GAGGGTAGCAGTGCACGCAA+AGG - chr3.2:5405343-5405362 MS.gene97133:CDS 60.0%
GCGGTCACCCTGGATATGCA+AGG + chr3.2:5404111-5404130 None:intergenic 60.0%
GGAGTCGGCATCGCTCTACT+TGG + chr3.2:5403630-5403649 None:intergenic 60.0%
TCTGGCGAATCGGAAGCCGT+TGG - chr3.2:5404784-5404803 MS.gene97133:CDS 60.0%
TGCATATCCAGGGTGACCGC+GGG - chr3.2:5404111-5404130 MS.gene97133:CDS 60.0%
TTGTCAATGGAACCCGGGGG+AGG + chr3.2:5403462-5403481 None:intergenic 60.0%
! CAAGGCATCAATCCCCCCCA+TGG + chr3.2:5404093-5404112 None:intergenic 60.0%
! GCTGGTTTCCCTGCAAGGAC+TGG - chr3.2:5404512-5404531 MS.gene97133:CDS 60.0%
AGGAAGACTCTCGGCTCCCG+AGG + chr3.2:5404558-5404577 None:intergenic 65.0%
GCATATCCAGGGTGACCGCG+GGG - chr3.2:5404112-5404131 MS.gene97133:CDS 65.0%
TATCTTCCCCGCGGTCACCC+TGG + chr3.2:5404121-5404140 None:intergenic 65.0%
GACTCTCGGCTCCCGAGGAG+AGG + chr3.2:5404553-5404572 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 5403429 5405417 5403429 ID=MS.gene97133
chr3.2 mRNA 5403429 5405417 5403429 ID=MS.gene97133.t1;Parent=MS.gene97133
chr3.2 exon 5403429 5405417 5403429 ID=MS.gene97133.t1.exon1;Parent=MS.gene97133.t1
chr3.2 CDS 5403429 5405417 5403429 ID=cds.MS.gene97133.t1;Parent=MS.gene97133.t1
Gene Sequence

>MS.gene97133

ATGGAAGAAGGGTTAGGTCAACATTCAGTTCCTCCCCCGGGTTCCATTGACAAGTATAAGATTCTGGATATTAAGCCTATAAGAAGTTTGATACCTGTTTTTTCAAGGAATCCTCAAGGTCAATCTTCAGGTCAGTATCCTTCTGGGTTTTCTCCGTTTTTCCCATTTGGTGGACCTCATGATACTTCAACCGCAAAGCCAAGTAGAGCGATGCCGACTCCACTTCAAGCATTTAGGAGCCCTTTTGGAGAGGATGAGGATCTCAATGACAATGATGGTTTTAGCAACAAAAGAAGTGCGGCAGCATCACATTCAAGCCGGGTCAGATTGAAGAAGCATAAGGTATATAATGATGTTCATGTTGATATGAGTGGTTTAGTTGGTATAAGCCCAGGTCAAAGAGACAATGGTAACCGTGAAGTTGTTAATACTGTGCTCATGACATTTGATGCGCTAAGACGAAGGCTATCTCAACTTGTAGATGCCAAGGAATGGAACACGGGTTCGATCAAACGTACCGATTTAAAAGCTGGCAATATTTGTATGACCAAAGGAATTCGAACAAACACAGCGAAGAGGGTAGGATCAGTACCTGGAGTTGAGATTGGGGACATTTTCTTTTTCCGAATGGAAATGTGTGTTATCGGTTTGCATGCTCAATCCATGGGGGGGATTGATGCCTTGCATATCCAGGGTGACCGCGGGGAAGATACTTTGGCTGTTAGCATTGTTTCGTCAGGAGAATACGACGATGAAGCTGAGGATGGTGATGTTATAATTTATACCGGTCAGGGTGGGAATTTCAACAAGAAAGATAAGCATGTGTCAGATCAGAAGCTTCATAAGGGTAATCTTGCTTTGGATAGAAGTTCACGAACACACAATGAAATAAGAGTCATCCGAGGCATCAAAGATGCTGTGACTCCAGGTGCAAAAATCTATGTCTATGATGGTCTGTATAAAATTCAAGATTCATGGGTTGAAAAAGCAAAAGGAGGTGGTGGCTTGTTTAAGTATAAGTTGATAAGAGTGCCTGGACAACCTAGTGCCTTTGCCGTTTGGAAATCTGTTCAGAAGTGGAAAGCTGGTTTCCCTGCAAGGACTGGACTTATTCTTGCTGACCTCTCCTCGGGAGCCGAGAGTCTTCCTGTATCCCTTGTCAATGAAGTCGATAACGTGAAATCACCTGCCTTTTTCACATATTTCCACTCTCTTAGACATCCGAAATCATTCAGTTTAATGCAGCCTTCACATAGTTGCAGCTGTAGTGGTAAAAAAGCATGTGTCCCTGGCGATTTGGACTGCTCATGCATTCGGAGAAACGAAGGTGATTTTCCGTATATTATCAATGGAGTTCTGGCGAATCGGAAGCCGTTGGTTCATGAATGTGGCCCCACATGTCAGTGTTTTCCTAACTGCAAAAATCGAGTATCCCAAACCGGTTTGAAGCACCAAATGGAAGTGTTCAAAACAAAGGATAAAGGTTGGGGTCTTCGGTCATGGGATCCTATTCGTGCTGGTGCTTTTATTTGCGAGTATGCAGGAGAAGTTATCGATAAAGCTAGGTTAAATCAGCTTGTACAAGAAGGAGATACTGATGAGTATGTTTTCGATACAACCCGTATTTATGAATCTTTCAAGTGGAATTATGAGCCTAAGTTACTAGAAGAAGCGGTCACAAATGAGTCTAGTGAGGACTATGCTTTGCCACACCCTCTTATTATAAATGCTAAGAATGTTGGAAATGTGGCTAGATTCATGAATCATAGTTGCTCTCCAAATGTTTTCTGGCAGCCTGTCTTATATGAAGAGAACAACCAATCCTTTCTCCATGTTGCATTTTTTGCATTGAGACATATTCCACCAATGCATGAGTTAACATATGATTATGGTTCTGACCGTTCCAATCATACCGAGGGTAGCAGTGCACGCAAAGGTAGAAAGAAATGCTTATGTGGATCATCAAACTGCTGCGGTTCTTTTACTTGA
Protein sequence

>MS.gene97133.t1

MEEGLGQHSVPPPGSIDKYKILDIKPIRSLIPVFSRNPQGQSSGQYPSGFSPFFPFGGPHDTSTAKPSRAMPTPLQAFRSPFGEDEDLNDNDGFSNKRSAAASHSSRVRLKKHKVYNDVHVDMSGLVGISPGQRDNGNREVVNTVLMTFDALRRRLSQLVDAKEWNTGSIKRTDLKAGNICMTKGIRTNTAKRVGSVPGVEIGDIFFFRMEMCVIGLHAQSMGGIDALHIQGDRGEDTLAVSIVSSGEYDDEAEDGDVIIYTGQGGNFNKKDKHVSDQKLHKGNLALDRSSRTHNEIRVIRGIKDAVTPGAKIYVYDGLYKIQDSWVEKAKGGGGLFKYKLIRVPGQPSAFAVWKSVQKWKAGFPARTGLILADLSSGAESLPVSLVNEVDNVKSPAFFTYFHSLRHPKSFSLMQPSHSCSCSGKKACVPGDLDCSCIRRNEGDFPYIINGVLANRKPLVHECGPTCQCFPNCKNRVSQTGLKHQMEVFKTKDKGWGLRSWDPIRAGAFICEYAGEVIDKARLNQLVQEGDTDEYVFDTTRIYESFKWNYEPKLLEEAVTNESSEDYALPHPLIINAKNVGNVARFMNHSCSPNVFWQPVLYEENNQSFLHVAFFALRHIPPMHELTYDYGSDRSNHTEGSSARKGRKKCLCGSSNCCGSFT