AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene51752

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51752.t1 MTR_3g011440 96.241 665 21 3 1 662 1 664 0.0 1327
MS.gene51752.t1 MTR_8g042750 59.797 689 230 8 15 661 4 687 0.0 847
MS.gene51752.t1 MTR_7g088370 46.757 740 279 20 1 661 1 704 0.0 629
MS.gene51752.t1 MTR_5g013420 41.450 538 294 13 125 659 567 1086 8.27e-122 388
MS.gene51752.t1 MTR_5g013420 41.296 540 296 13 125 661 567 1088 8.93e-122 388
MS.gene51752.t1 MTR_4g010830 39.630 540 304 14 125 661 459 979 1.51e-112 361
MS.gene51752.t1 MTR_8g070075 40.546 476 251 12 172 631 290 749 2.68e-110 350
MS.gene51752.t1 MTR_8g070070 41.239 468 255 12 174 631 299 756 1.91e-109 348
MS.gene51752.t1 MTR_1g035420 37.058 537 299 14 108 631 135 645 1.82e-106 337
MS.gene51752.t1 MTR_8g071030 40.179 448 247 9 194 631 300 736 6.15e-104 333
MS.gene51752.t1 MTR_4g010550 38.277 499 255 15 166 661 15 463 3.37e-98 309
MS.gene51752.t1 MTR_6g061270 36.523 512 285 15 171 658 195 690 4.94e-93 303
MS.gene51752.t1 MTR_7g084090 36.686 507 296 12 169 658 255 753 1.28e-91 300
MS.gene51752.t1 MTR_1g035400 34.766 512 300 14 139 631 68 564 6.44e-91 294
MS.gene51752.t1 MTR_6g044690 35.743 498 273 12 157 633 94 565 2.16e-89 290
MS.gene51752.t1 MTR_6g061200 35.458 502 275 14 171 658 195 661 4.67e-87 286
MS.gene51752.t1 MTR_0376s0030 35.098 510 291 14 135 633 83 563 3.22e-85 279
MS.gene51752.t1 MTR_6g043960 32.596 497 273 13 155 633 31 483 1.85e-71 239
MS.gene51752.t1 MTR_7g084090 38.547 358 206 7 169 515 255 609 1.55e-69 239
MS.gene51752.t1 MTR_1g048950 33.809 491 264 12 189 661 85 532 6.76e-67 229
MS.gene51752.t1 MTR_2g054460 31.250 512 280 12 139 633 9 465 3.02e-65 223
MS.gene51752.t1 MTR_7g445710 29.745 548 273 20 135 657 78 538 3.18e-58 206
MS.gene51752.t1 MTR_7g445530 29.750 521 255 19 135 630 78 512 2.06e-55 197
MS.gene51752.t1 MTR_7g450730 28.843 527 270 17 135 657 75 500 1.58e-54 194
MS.gene51752.t1 MTR_7g052480 31.319 364 213 11 302 658 219 552 3.14e-41 158
MS.gene51752.t1 MTR_1g080340 27.811 338 171 10 372 658 267 582 7.31e-32 131
MS.gene51752.t1 MTR_5g018850 31.889 323 166 10 370 661 1207 1506 1.74e-31 132
MS.gene51752.t1 MTR_8g078490 30.240 334 172 10 361 661 947 1252 1.49e-30 129
MS.gene51752.t1 MTR_1g069570 28.487 337 169 10 372 658 428 742 1.50e-28 122
MS.gene51752.t1 MTR_8g078505 28.923 325 177 9 359 657 237 533 2.21e-28 120
MS.gene51752.t1 MTR_4g132610 34.685 222 113 5 445 661 852 1046 5.50e-27 117
MS.gene51752.t1 MTR_7g098390 27.795 331 173 7 374 658 388 698 2.02e-25 112
MS.gene51752.t1 MTR_7g445600 35.065 154 59 2 477 630 243 355 1.23e-23 103
MS.gene51752.t1 MTR_7g445600 37.615 109 56 4 192 300 124 220 7.02e-11 64.7
MS.gene51752.t1 MTR_1g069570 26.966 267 128 8 372 589 428 676 1.52e-17 87.0
MS.gene51752.t1 MTR_1g098370 30.964 197 97 7 462 657 75 233 6.60e-16 81.3
MS.gene51752.t1 MTR_1g098000 30.964 197 97 7 462 657 72 230 1.21e-15 80.5
MS.gene51752.t1 MTR_6g059310 27.551 196 99 4 459 645 87 248 2.69e-15 78.2
MS.gene51752.t1 MTR_6g059310 27.551 196 99 4 459 645 87 248 2.71e-15 78.2
MS.gene51752.t1 MTR_0071s0100 30.457 197 96 5 463 659 191 346 1.39e-14 76.6
MS.gene51752.t1 MTR_1g012890 28.249 177 94 4 486 662 225 368 6.88e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51752.t1 AT5G04940 56.588 592 237 7 70 661 98 669 0.0 691
MS.gene51752.t1 AT5G04940 56.588 592 237 7 70 661 98 669 0.0 691
MS.gene51752.t1 AT1G73100 51.180 678 294 9 6 661 6 668 0.0 686
MS.gene51752.t1 AT1G17770 43.351 579 295 12 98 662 134 693 1.55e-154 462
MS.gene51752.t1 AT2G24740 45.102 541 251 14 129 661 252 754 9.25e-148 447
MS.gene51752.t1 AT2G35160 37.797 590 309 19 80 661 218 757 8.13e-111 351
MS.gene51752.t1 AT2G35160 37.797 590 309 19 80 661 254 793 3.01e-110 351
MS.gene51752.t1 AT2G35160 37.797 590 309 19 80 661 254 793 3.01e-110 351
MS.gene51752.t1 AT2G35160 37.797 590 309 19 80 661 254 793 3.01e-110 351
MS.gene51752.t1 AT2G35160 37.797 590 309 19 80 661 254 793 3.01e-110 351
MS.gene51752.t1 AT4G13460 39.010 505 284 11 139 631 145 637 3.55e-107 338
MS.gene51752.t1 AT4G13460 39.010 505 284 11 139 631 145 637 3.55e-107 338
MS.gene51752.t1 AT2G33290 38.583 508 279 8 139 631 149 638 1.91e-105 334
MS.gene51752.t1 AT2G33290 38.583 508 279 8 139 631 149 638 1.91e-105 334
MS.gene51752.t1 AT2G33290 38.583 508 279 8 139 631 149 638 1.91e-105 334
MS.gene51752.t1 AT2G33290 38.583 508 279 8 139 631 149 638 1.91e-105 334
MS.gene51752.t1 AT2G22740 37.523 533 304 13 139 658 270 786 3.36e-105 337
MS.gene51752.t1 AT2G22740 37.523 533 304 13 139 658 270 786 3.36e-105 337
MS.gene51752.t1 AT5G13960 36.140 487 279 14 192 658 12 486 1.75e-90 290
MS.gene51752.t1 AT5G13960 35.225 511 299 14 168 658 122 620 2.25e-89 291
MS.gene51752.t1 AT2G05900 41.176 221 121 4 212 428 1 216 4.88e-45 163
MS.gene51752.t1 AT2G05900 54.118 85 30 1 577 661 236 311 8.18e-23 100
MS.gene51752.t1 AT5G47150 41.589 214 113 5 139 347 118 324 2.51e-41 153
MS.gene51752.t1 AT3G04380 27.463 335 175 8 372 658 117 431 2.72e-35 139
MS.gene51752.t1 AT3G04380 27.463 335 175 8 372 658 128 442 3.05e-35 139
MS.gene51752.t1 AT3G04380 27.463 335 175 8 372 658 101 415 3.68e-35 139
MS.gene51752.t1 AT3G04380 27.463 335 175 8 372 658 117 431 3.70e-35 139
MS.gene51752.t1 AT3G04380 27.463 335 175 8 372 658 144 458 3.87e-35 139
MS.gene51752.t1 AT3G04380 27.463 335 175 8 372 658 144 458 3.94e-35 139
MS.gene51752.t1 AT5G47160 37.549 253 137 8 103 344 166 408 1.89e-34 136
MS.gene51752.t1 AT5G47160 37.549 253 137 8 103 344 166 408 1.89e-34 136
MS.gene51752.t1 AT5G47160 37.549 253 137 8 103 344 166 408 1.89e-34 136
MS.gene51752.t1 AT2G23740 31.988 322 166 15 368 662 1080 1375 8.43e-32 133
MS.gene51752.t1 AT2G23740 31.988 322 166 15 368 662 1087 1382 9.92e-32 132
MS.gene51752.t1 AT2G23740 31.988 322 166 15 368 662 1087 1382 9.92e-32 132
MS.gene51752.t1 AT2G23740 31.988 322 166 15 368 662 1087 1382 9.92e-32 132
MS.gene51752.t1 AT1G04050 29.674 337 163 13 372 658 303 615 5.20e-30 126
MS.gene51752.t1 AT1G04050 30.267 337 161 14 372 658 407 719 5.98e-30 126
MS.gene51752.t1 AT1G04050 30.267 337 161 14 372 658 407 719 5.98e-30 126
MS.gene51752.t1 AT5G43990 28.190 337 165 12 372 658 373 682 9.04e-29 122
MS.gene51752.t1 AT5G43990 28.190 337 165 12 372 658 373 682 9.04e-29 122
MS.gene51752.t1 AT5G43990 28.190 337 165 12 372 658 373 682 9.04e-29 122
MS.gene51752.t1 AT5G43990 28.190 337 165 12 372 658 373 682 9.04e-29 122
MS.gene51752.t1 AT5G43990 28.190 337 165 12 372 658 324 633 9.18e-29 122
MS.gene51752.t1 AT5G43990 28.190 337 165 12 372 658 324 633 9.18e-29 122
MS.gene51752.t1 AT5G43990 28.190 337 165 12 372 658 324 633 9.18e-29 122
MS.gene51752.t1 AT5G43990 28.190 337 165 12 372 658 324 633 9.18e-29 122
MS.gene51752.t1 AT5G43990 28.190 337 165 12 372 658 393 702 9.51e-29 122
MS.gene51752.t1 AT5G43990 28.190 337 165 12 372 658 393 702 9.51e-29 122
MS.gene51752.t1 AT5G43990 28.190 337 165 12 372 658 393 702 9.51e-29 122
MS.gene51752.t1 AT5G43990 28.190 337 165 12 372 658 393 702 9.51e-29 122
MS.gene51752.t1 AT5G43990 28.190 337 165 12 372 658 396 705 1.02e-28 122
MS.gene51752.t1 AT5G43990 28.190 337 165 12 372 658 396 705 1.02e-28 122
MS.gene51752.t1 AT5G43990 28.190 337 165 12 372 658 304 613 1.09e-28 122
MS.gene51752.t1 AT5G43990 28.190 337 165 12 372 658 416 725 1.18e-28 122
MS.gene51752.t1 AT5G43990 28.190 337 165 12 372 658 416 725 1.18e-28 122
MS.gene51752.t1 AT3G03750 33.188 229 127 8 435 661 145 349 2.61e-23 102
MS.gene51752.t1 AT2G23740 32.530 249 120 14 368 589 1087 1314 1.70e-20 97.4
MS.gene51752.t1 AT2G23740 32.530 249 120 14 368 589 1087 1314 1.70e-20 97.4
MS.gene51752.t1 AT3G03750 29.956 227 121 8 435 661 145 333 7.03e-17 82.8
MS.gene51752.t1 AT1G77300 30.928 194 97 6 466 659 1008 1164 2.29e-15 80.9
MS.gene51752.t1 AT1G77300 30.928 194 97 6 466 659 1008 1164 3.56e-15 80.5
MS.gene51752.t1 AT4G30860 29.442 197 98 5 463 659 307 462 1.64e-13 73.9
MS.gene51752.t1 AT3G59960 27.869 183 75 6 485 658 112 246 9.40e-12 66.6
MS.gene51752.t1 AT3G59960 27.869 183 75 6 485 658 112 246 9.40e-12 66.6
MS.gene51752.t1 AT3G59960 27.869 183 75 6 485 658 112 246 9.40e-12 66.6
MS.gene51752.t1 AT3G59960 28.814 177 81 6 485 650 112 254 2.58e-11 65.9

Find 164 sgRNAs with CRISPR-Local

Find 191 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCAGGTCAGTATCCTTC+TGG 0.204050 3.4:-7744024 MS.gene51752:CDS
TGCATTAAACTGAATGATTT+TGG 0.207898 3.4:+7742926 None:intergenic
ACAGGTATCAAACTTCTTAT+AGG 0.235001 3.4:+7744072 None:intergenic
CGACTCCACTTCAAGCATTT+AGG 0.258428 3.4:-7743933 MS.gene51752:CDS
CAAGCATTTAGGAGCCCTTT+TGG 0.274971 3.4:-7743922 MS.gene51752:CDS
CATTGACAAGTATAAGATTC+TGG 0.293840 3.4:-7744103 MS.gene51752:CDS
AGAGTGGAAATATGTGAAAA+AGG 0.306165 3.4:+7742958 None:intergenic
CATGAGTTAACATATGATTA+TGG 0.312052 3.4:-7742278 MS.gene51752:CDS
TTATATTATCAATGGAGTTC+TGG 0.315928 3.4:-7742810 MS.gene51752:CDS
AGAACTCCATTGATAATATA+AGG 0.322628 3.4:+7742812 None:intergenic
TGTATAAAATTCAAGATTCA+TGG 0.343226 3.4:-7743192 MS.gene51752:CDS
TTCTTAGCATTTATAATAAG+AGG 0.346128 3.4:+7742434 None:intergenic
AGCATGTGTCCCTGGCGATT+TGG 0.346957 3.4:-7742870 MS.gene51752:CDS
CGAATGGAAATGTGTGTTAT+CGG 0.357207 3.4:-7743523 MS.gene51752:CDS
CTTCAGGTCAGTATCCTTCT+GGG 0.359790 3.4:-7744023 MS.gene51752:CDS
AACCTAGTGCCTTTGCCGTT+TGG 0.360454 3.4:-7743108 MS.gene51752:CDS
TTTGGTGCTTCAAACCGGTT+TGG 0.365259 3.4:+7742714 None:intergenic
TCATAAGGGTAATCTTGCTT+TGG 0.385063 3.4:-7743308 MS.gene51752:CDS
CAAAACAAAGGATAAAGGTT+GGG 0.388648 3.4:-7742681 MS.gene51752:CDS
TTGGTGCTTCAAACCGGTTT+GGG 0.391461 3.4:+7742715 None:intergenic
AATCCTCAAGGTCAATCTTC+AGG 0.392097 3.4:-7744039 MS.gene51752:CDS
TGTTATAATTTATACCGGTC+AGG 0.396575 3.4:-7743377 MS.gene51752:CDS
ACTTCATTGACAAGTGATAC+TGG 0.399879 3.4:+7743001 None:intergenic
TGTGTTTGTTCGAATTCCTT+TGG 0.402301 3.4:+7743600 None:intergenic
GATTGATGCCTTGCATATCC+AGG 0.403598 3.4:-7743476 MS.gene51752:CDS
ACTTGAAAGATTCATAAATA+CGG 0.407062 3.4:+7742528 None:intergenic
CGAACCTGTGTTCCATTCCT+TGG 0.409287 3.4:+7743663 None:intergenic
CAGTACCTGGAGTTGAGATT+GGG 0.418871 3.4:-7743561 MS.gene51752:CDS
ACAGGCTGCCAGAAAACATT+TGG 0.419329 3.4:+7742371 None:intergenic
ATTTGGACTGCTCATGCATT+CGG 0.422721 3.4:-7742853 MS.gene51752:CDS
TACCATTGTCTCTTTGACCT+GGG 0.423334 3.4:+7743758 None:intergenic
TCAGTACCTGGAGTTGAGAT+TGG 0.424381 3.4:-7743562 MS.gene51752:CDS
TTCCATTTGGTGCTTCAAAC+CGG 0.425045 3.4:+7742709 None:intergenic
ATTATAAATGCTAAGAATGT+TGG 0.437154 3.4:-7742428 MS.gene51752:CDS
GCTGTTAGCATTGTTTCGTC+AGG 0.439867 3.4:-7743430 MS.gene51752:CDS
AGAATAAGTCCAGTCCTTGC+AGG 0.449322 3.4:+7743055 None:intergenic
AAGGTTGGGGTCTTCGATCA+TGG 0.452431 3.4:-7742667 MS.gene51752:CDS
GCTGGTTTCCCTGCAAGGAC+TGG 0.456055 3.4:-7743064 MS.gene51752:CDS
ATAAAAGCACCAGCACGAAT+AGG 0.460396 3.4:+7742641 None:intergenic
TTACCATTGTCTCTTTGACC+TGG 0.461172 3.4:+7743757 None:intergenic
GTGTTCAAAACAAAGGATAA+AGG 0.462890 3.4:-7742686 MS.gene51752:CDS
CGGTTTGCATGCTCAATCGA+TGG 0.470289 3.4:-7743503 MS.gene51752:CDS
CGATAACACACATTTCCATT+CGG 0.476797 3.4:+7743524 None:intergenic
TATTCTTGCTGACCTCTCCT+CGG 0.477270 3.4:-7743038 MS.gene51752:CDS
AGATCCTCATCCTCTCCAAA+AGG 0.481832 3.4:+7743907 None:intergenic
GTATCATGAGGTCCACCAAA+TGG 0.483316 3.4:+7743985 None:intergenic
ATCCTCACTAGACTCGTTTG+TGG 0.484407 3.4:+7742472 None:intergenic
CTTGAAAGATTCATAAATAC+GGG 0.486596 3.4:+7742529 None:intergenic
GTCAGATCAGAAGCTTCATA+AGG 0.487005 3.4:-7743323 MS.gene51752:CDS
CATGAGCAGTCCAAATCGCC+AGG 0.488074 3.4:+7742860 None:intergenic
GTTGATATGAGTGGTTTAGT+TGG 0.492160 3.4:-7743787 MS.gene51752:CDS
ACTGCTACCCTCGGTATGAT+TGG 0.492178 3.4:+7742244 None:intergenic
TGTATAATGGAAGAAGGGTT+AGG 0.492317 3.4:-7744153 None:intergenic
CAGAATCTTATACTTGTCAA+TGG 0.495015 3.4:+7744104 None:intergenic
GCACAATATTAACAACTTCA+CGG 0.500326 3.4:+7743734 None:intergenic
TGCATATCCAGGGTGACCGC+GGG 0.500357 3.4:-7743465 MS.gene51752:CDS
TCACAGCATCTTTGATGCCT+CGG 0.503981 3.4:+7743248 None:intergenic
GGTTTGCATGCTCAATCGAT+GGG 0.505325 3.4:-7743502 MS.gene51752:CDS
TATCATGAGGTCCACCAAAT+GGG 0.505449 3.4:+7743986 None:intergenic
TTGTTCTCTTCGTATAAGAC+AGG 0.505552 3.4:+7742353 None:intergenic
AACCGGTTTGAAGCACCAAA+TGG 0.508329 3.4:-7742711 MS.gene51752:CDS
TCTGTTCAGAAGTGGAAAGC+TGG 0.508734 3.4:-7743082 MS.gene51752:CDS
ATCAAAGATGCTGTGACTCC+AGG 0.511194 3.4:-7743241 MS.gene51752:CDS
GGTGATGTTATAATTTATAC+CGG 0.512209 3.4:-7743382 MS.gene51752:CDS
TATCTTCCCCGCGGTCACCC+TGG 0.516259 3.4:+7743458 None:intergenic
ATTCTTGCTGACCTCTCCTC+GGG 0.517115 3.4:-7743037 MS.gene51752:CDS
GTGAATTGTATAATGGAAGA+AGG 0.518785 3.4:-7744159 None:intergenic
TCAATGGAGTTCTGGCGAAT+CGG 0.519477 3.4:-7742802 MS.gene51752:CDS
GTATAAAATTCAAGATTCAT+GGG 0.521482 3.4:-7743191 MS.gene51752:CDS
TATAAGTTGATAAGAGTGCC+TGG 0.523531 3.4:-7743133 MS.gene51752:CDS
TCAACACTCAGTTCCTCCCC+CGG 0.526455 3.4:-7744130 MS.gene51752:CDS
TGACCGCGGGGAAGATACTT+TGG 0.527412 3.4:-7743452 MS.gene51752:CDS
GGTTTAGTTGGTATAAGCCC+AGG 0.529198 3.4:-7743775 MS.gene51752:CDS
AAACGTACCGATTTAAAAGC+TGG 0.530169 3.4:-7743637 MS.gene51752:CDS
GTTGAAATTCCCACCCTGAC+CGG 0.530593 3.4:+7743363 None:intergenic
TCATATGTTAACTCATGCAT+TGG 0.532861 3.4:+7742284 None:intergenic
CGGCAGCATCACATTCAAGC+CGG 0.533696 3.4:-7743849 MS.gene51752:CDS
TCAAAACAAAGGATAAAGGT+TGG 0.534159 3.4:-7742682 MS.gene51752:CDS
GGTAGAAAGAAATGCTTATG+TGG 0.534383 3.4:-7742212 MS.gene51752:CDS
TCATGGGATCCTATTCGTGC+TGG 0.535655 3.4:-7742650 MS.gene51752:CDS
TCAGATCAGAAGCTTCATAA+GGG 0.535931 3.4:-7743322 MS.gene51752:CDS
TGCATGCTCAATCGATGGGG+GGG 0.538668 3.4:-7743498 MS.gene51752:CDS
GGAGTCGGCATCGCTCTACT+TGG 0.540336 3.4:+7743949 None:intergenic
AGGTTGGGGTCTTCGATCAT+GGG 0.540693 3.4:-7742666 MS.gene51752:CDS
AAAACAAAGGATAAAGGTTG+GGG 0.541211 3.4:-7742680 MS.gene51752:CDS
GGCAATATTTGTATGACCAA+AGG 0.542268 3.4:-7743616 MS.gene51752:CDS
GGAAAGCTGGTTTCCCTGCA+AGG 0.545796 3.4:-7743069 MS.gene51752:CDS
GACTCTCGGCTCCCGAGGAG+AGG 0.546001 3.4:+7743026 None:intergenic
ATCTCAACTTGTAGATGCCA+AGG 0.547043 3.4:-7743680 MS.gene51752:CDS
ATGCAACATGGAGAAAGGAT+TGG 0.548940 3.4:+7742330 None:intergenic
TTCCAAACGGCAAAGGCACT+AGG 0.550397 3.4:+7743106 None:intergenic
GATCCTCATCCTCTCCAAAA+GGG 0.552939 3.4:+7743908 None:intergenic
AACTTGTAGATGCCAAGGAA+TGG 0.553451 3.4:-7743675 MS.gene51752:CDS
TTTGGAAATCTGTTCAGAAG+TGG 0.553589 3.4:-7743090 MS.gene51752:CDS
ATGTCCCCAATCTCAACTCC+AGG 0.554821 3.4:+7743556 None:intergenic
TCTTAGCATTTATAATAAGA+GGG 0.554977 3.4:+7742435 None:intergenic
GGCAGCATCACATTCAAGCC+GGG 0.555680 3.4:-7743848 MS.gene51752:CDS
GTATTTATGAATCTTTCAAG+TGG 0.556979 3.4:-7742526 MS.gene51752:CDS
GCAAAGGCACTAGGTTGTCC+AGG 0.558915 3.4:+7743115 None:intergenic
TTATACTTGTCAATGGAACC+CGG 0.562427 3.4:+7744111 None:intergenic
GGTCAGATTGAAGAAGCATA+AGG 0.562915 3.4:-7743827 MS.gene51752:CDS
TCACATAGTTGCAGCTGTAG+TGG 0.565201 3.4:-7742899 MS.gene51752:CDS
GCATTTATAATAAGAGGGTG+TGG 0.566087 3.4:+7742440 None:intergenic
CTAAATGCTTGAAGTGGAGT+CGG 0.566439 3.4:+7743934 None:intergenic
GAGAAGTTATCGATAAAGCT+AGG 0.566713 3.4:-7742604 MS.gene51752:CDS
GTTATAATTTATACCGGTCA+GGG 0.567735 3.4:-7743376 MS.gene51752:CDS
TTGCATGCTCAATCGATGGG+GGG 0.569075 3.4:-7743499 MS.gene51752:CDS
AAGCCGTTGGTTCATGAATG+TGG 0.569854 3.4:-7742779 MS.gene51752:CDS
TTTGCATGCTCAATCGATGG+GGG 0.571740 3.4:-7743500 MS.gene51752:CDS
GAGGATCTCAATGACAATGA+TGG 0.572099 3.4:-7743892 MS.gene51752:CDS
TATGCTTCTTCAATCTGACC+CGG 0.573333 3.4:+7743830 None:intergenic
GTCGCTTCTTCTAGTAACTT+AGG 0.574919 3.4:+7742494 None:intergenic
TCGAACAAACACAGCGAAGA+GGG 0.575127 3.4:-7743590 MS.gene51752:CDS
TTGCATATCCAGGGTGACCG+CGG 0.575259 3.4:-7743466 MS.gene51752:CDS
TTTGCGTGCACTGCTACCCT+CGG 0.576882 3.4:+7742235 None:intergenic
TATGTTAACTCATGCATTGG+TGG 0.577942 3.4:+7742287 None:intergenic
GTTTGCATGCTCAATCGATG+GGG 0.580565 3.4:-7743501 MS.gene51752:CDS
AACAGATTTCCAAACGGCAA+AGG 0.589578 3.4:+7743099 None:intergenic
GGGCTCCTAAATGCTTGAAG+TGG 0.589829 3.4:+7743928 None:intergenic
TTAAGTCAGCTTGTACAAGA+AGG 0.590145 3.4:-7742581 MS.gene51752:CDS
TGAATTGTATAATGGAAGAA+GGG 0.593495 3.4:-7744158 None:intergenic
AATGGAAGTGTTCAAAACAA+AGG 0.598701 3.4:-7742693 MS.gene51752:CDS
AAGTGATACTGGAAGACTCT+CGG 0.599204 3.4:+7743012 None:intergenic
CTTCTGAACAGATTTCCAAA+CGG 0.599772 3.4:+7743093 None:intergenic
TATACTTGTCAATGGAACCC+GGG 0.600215 3.4:+7744112 None:intergenic
TGACCTGAAGATTGACCTTG+AGG 0.600787 3.4:+7744036 None:intergenic
GAATAAGTCCAGTCCTTGCA+GGG 0.601962 3.4:+7743056 None:intergenic
CATTTGATGCGCTAAGACGA+AGG 0.602005 3.4:-7743705 MS.gene51752:CDS
AAGAGGGTAGGATCAGTACC+TGG 0.602661 3.4:-7743574 MS.gene51752:CDS
GGGCCACATTCATGAACCAA+CGG 0.610204 3.4:+7742776 None:intergenic
TCTGGCGAATCGGAAGCCGT+TGG 0.612003 3.4:-7742792 MS.gene51752:CDS
TGCTAAGAATGTTGGAAATG+TGG 0.613562 3.4:-7742420 MS.gene51752:CDS
GATGTTCATGTTGATATGAG+TGG 0.616806 3.4:-7743796 MS.gene51752:CDS
TGGAAGACTCTCGGCTCCCG+AGG 0.617476 3.4:+7743021 None:intergenic
AGCCCAGGTCAAAGAGACAA+TGG 0.619161 3.4:-7743760 MS.gene51752:CDS
TAATTTATACCGGTCAGGGT+GGG 0.620279 3.4:-7743372 MS.gene51752:CDS
TTAGGAAAACACTGACATGT+GGG 0.620821 3.4:+7742755 None:intergenic
GACCGTTCCAATCATACCGA+GGG 0.625961 3.4:-7742251 MS.gene51752:CDS
TACGACGATGAAGCTGAGGA+TGG 0.627250 3.4:-7743403 MS.gene51752:CDS
TACCCTCGGTATGATTGGAA+CGG 0.630497 3.4:+7742249 None:intergenic
GCGGTCACCCTGGATATGCA+AGG 0.632039 3.4:+7743468 None:intergenic
ACAAACACAGCGAAGAGGGT+AGG 0.634440 3.4:-7743586 MS.gene51752:CDS
CTACAGCTGCAACTATGTGA+AGG 0.634477 3.4:+7742902 None:intergenic
ATACTTGTCAATGGAACCCG+GGG 0.636158 3.4:+7744113 None:intergenic
ATTGATGCCTTGCATATCCA+GGG 0.637842 3.4:-7743475 MS.gene51752:CDS
GTTAGGAAAACACTGACATG+TGG 0.639912 3.4:+7742754 None:intergenic
GATGCCAAGGAATGGAACAC+AGG 0.640965 3.4:-7743667 MS.gene51752:CDS
AGAATACGACGATGAAGCTG+AGG 0.645222 3.4:-7743407 MS.gene51752:CDS
TTCGAACAAACACAGCGAAG+AGG 0.646517 3.4:-7743591 MS.gene51752:CDS
AGTACCTGGAGTTGAGATTG+GGG 0.657916 3.4:-7743560 MS.gene51752:CDS
TCATGCATTCGGAGAAACGA+AGG 0.659918 3.4:-7742842 MS.gene51752:CDS
TTTGCAGTTGAAGTATCATG+AGG 0.660591 3.4:+7743973 None:intergenic
TGTGGATCATCAAACTGCCG+TGG 0.665034 3.4:-7742194 MS.gene51752:CDS
ATAATTTATACCGGTCAGGG+TGG 0.675305 3.4:-7743373 MS.gene51752:CDS
GAGGGTAGCAGTGCACGCAA+AGG 0.681126 3.4:-7742233 MS.gene51752:CDS
GACCACAAACGAGTCTAGTG+AGG 0.682671 3.4:-7742474 MS.gene51752:CDS
ATGAGCAGTCCAAATCGCCA+GGG 0.685642 3.4:+7742861 None:intergenic
TAGGAAAACACTGACATGTG+GGG 0.688446 3.4:+7742756 None:intergenic
TGACCGTTCCAATCATACCG+AGG 0.697564 3.4:-7742252 MS.gene51752:CDS
GCATATCCAGGGTGACCGCG+GGG 0.702296 3.4:-7743464 MS.gene51752:CDS
AATGTCAAGTAAAAGAACCA+CGG 0.723625 3.4:+7742177 None:intergenic
AATGAAATAAGAGTCATCCG+AGG 0.740934 3.4:-7743265 MS.gene51752:CDS
CAGCCAAAGTATCTTCCCCG+CGG 0.752822 3.4:+7743449 None:intergenic
TACTTGTCAATGGAACCCGG+GGG 0.840303 3.4:+7744114 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTTGAAAGATTCATAAATA+CGG + chr3.4:7743803-7743822 None:intergenic 20.0%
!! ATTATAAATGCTAAGAATGT+TGG - chr3.4:7743900-7743919 MS.gene51752:CDS 20.0%
!! GTATAAAATTCAAGATTCAT+GGG - chr3.4:7743137-7743156 MS.gene51752:CDS 20.0%
!! TCTTAGCATTTATAATAAGA+GGG + chr3.4:7743896-7743915 None:intergenic 20.0%
!! TGTATAAAATTCAAGATTCA+TGG - chr3.4:7743136-7743155 MS.gene51752:CDS 20.0%
!! TTCTTAGCATTTATAATAAG+AGG + chr3.4:7743897-7743916 None:intergenic 20.0%
!!! GATTTTCCTTATATTATCAA+TGG - chr3.4:7743510-7743529 MS.gene51752:CDS 20.0%
! CATGAGTTAACATATGATTA+TGG - chr3.4:7744050-7744069 MS.gene51752:CDS 25.0%
! CTTGAAAGATTCATAAATAC+GGG + chr3.4:7743802-7743821 None:intergenic 25.0%
! GGTGATGTTATAATTTATAC+CGG - chr3.4:7742946-7742965 MS.gene51752:CDS 25.0%
! GTATTTATGAATCTTTCAAG+TGG - chr3.4:7743802-7743821 MS.gene51752:CDS 25.0%
! TTATATTATCAATGGAGTTC+TGG - chr3.4:7743518-7743537 MS.gene51752:CDS 25.0%
!! AATATTGCCAGCTTTTAAAT+CGG + chr3.4:7742701-7742720 None:intergenic 25.0%
!! AGAACTCCATTGATAATATA+AGG + chr3.4:7743519-7743538 None:intergenic 25.0%
!! TGCATTAAACTGAATGATTT+TGG + chr3.4:7743405-7743424 None:intergenic 25.0%
AAAAAATGCAACATGGAGAA+AGG + chr3.4:7744006-7744025 None:intergenic 30.0%
AAAACAAAGGATAAAGGTTG+GGG - chr3.4:7743648-7743667 MS.gene51752:CDS 30.0%
ACAGGTATCAAACTTCTTAT+AGG + chr3.4:7742259-7742278 None:intergenic 30.0%
AGAGTGGAAATATGTGAAAA+AGG + chr3.4:7743373-7743392 None:intergenic 30.0%
CAAAACAAAGGATAAAGGTT+GGG - chr3.4:7743647-7743666 MS.gene51752:CDS 30.0%
CAGAATCTTATACTTGTCAA+TGG + chr3.4:7742227-7742246 None:intergenic 30.0%
CATTGACAAGTATAAGATTC+TGG - chr3.4:7742225-7742244 MS.gene51752:CDS 30.0%
GCAAAAATCTATGTCTATGA+TGG - chr3.4:7743111-7743130 MS.gene51752:CDS 30.0%
GCACAATATTAACAACTTCA+CGG + chr3.4:7742597-7742616 None:intergenic 30.0%
GTGTTCAAAACAAAGGATAA+AGG - chr3.4:7743642-7743661 MS.gene51752:CDS 30.0%
GTTATAATTTATACCGGTCA+GGG - chr3.4:7742952-7742971 MS.gene51752:CDS 30.0%
TCAAAACAAAGGATAAAGGT+TGG - chr3.4:7743646-7743665 MS.gene51752:CDS 30.0%
TCAATGCAAAAAATGCAACA+TGG + chr3.4:7744013-7744032 None:intergenic 30.0%
TCATATGTTAACTCATGCAT+TGG + chr3.4:7744047-7744066 None:intergenic 30.0%
TGTTATAATTTATACCGGTC+AGG - chr3.4:7742951-7742970 MS.gene51752:CDS 30.0%
! TTTTAGCAACAAAAGAAGTG+CGG - chr3.4:7742459-7742478 MS.gene51752:CDS 30.0%
!! AATGGAAGTGTTCAAAACAA+AGG - chr3.4:7743635-7743654 MS.gene51752:CDS 30.0%
!! TTTTCTCCATTTTTCCCATT+TGG - chr3.4:7742328-7742347 MS.gene51752:CDS 30.0%
!!! GTTTGATACCTGTTTTTTCA+AGG - chr3.4:7742266-7742285 MS.gene51752:CDS 30.0%
!!! TTGTTTTGAACACTTCCATT+TGG + chr3.4:7743635-7743654 None:intergenic 30.0%
AAAAATCGAGTATCCCAAAC+CGG - chr3.4:7743600-7743619 MS.gene51752:CDS 35.0%
AAAAATGGAGAAAACCCAGA+AGG + chr3.4:7742322-7742341 None:intergenic 35.0%
AATGAAATAAGAGTCATCCG+AGG - chr3.4:7743063-7743082 MS.gene51752:CDS 35.0%
ACTTCATTGACAAGTGATAC+TGG + chr3.4:7743330-7743349 None:intergenic 35.0%
CGAATGGAAATGTGTGTTAT+CGG - chr3.4:7742805-7742824 MS.gene51752:CDS 35.0%
CGATAACACACATTTCCATT+CGG + chr3.4:7742807-7742826 None:intergenic 35.0%
CTTCTGAACAGATTTCCAAA+CGG + chr3.4:7743238-7743257 None:intergenic 35.0%
GAGAAGTTATCGATAAAGCT+AGG - chr3.4:7743724-7743743 MS.gene51752:CDS 35.0%
GATGTTCATGTTGATATGAG+TGG - chr3.4:7742532-7742551 MS.gene51752:CDS 35.0%
GCATTTATAATAAGAGGGTG+TGG + chr3.4:7743891-7743910 None:intergenic 35.0%
GGCAATATTTGTATGACCAA+AGG - chr3.4:7742712-7742731 MS.gene51752:CDS 35.0%
GGTAGAAAGAAATGCTTATG+TGG - chr3.4:7744116-7744135 MS.gene51752:CDS 35.0%
GTTGATATGAGTGGTTTAGT+TGG - chr3.4:7742541-7742560 MS.gene51752:CDS 35.0%
TATGTTAACTCATGCATTGG+TGG + chr3.4:7744044-7744063 None:intergenic 35.0%
TCAGATCAGAAGCTTCATAA+GGG - chr3.4:7743006-7743025 MS.gene51752:CDS 35.0%
TCATAAGGGTAATCTTGCTT+TGG - chr3.4:7743020-7743039 MS.gene51752:CDS 35.0%
TGAGGATTCCTTGAAAAAAC+AGG + chr3.4:7742277-7742296 None:intergenic 35.0%
TGCTAAGAATGTTGGAAATG+TGG - chr3.4:7743908-7743927 MS.gene51752:CDS 35.0%
TGGAAATATGTGAAAAAGGC+AGG + chr3.4:7743369-7743388 None:intergenic 35.0%
TGTGTTTGTTCGAATTCCTT+TGG + chr3.4:7742731-7742750 None:intergenic 35.0%
TTAAGTCAGCTTGTACAAGA+AGG - chr3.4:7743747-7743766 MS.gene51752:CDS 35.0%
TTAGGAAAACACTGACATGT+GGG + chr3.4:7743576-7743595 None:intergenic 35.0%
TTATACTTGTCAATGGAACC+CGG + chr3.4:7742220-7742239 None:intergenic 35.0%
TTGTTCTCTTCGTATAAGAC+AGG + chr3.4:7743978-7743997 None:intergenic 35.0%
TTTGGAAATCTGTTCAGAAG+TGG - chr3.4:7743238-7743257 MS.gene51752:CDS 35.0%
! ATTTTGGATGTCTAAGAGAG+TGG + chr3.4:7743389-7743408 None:intergenic 35.0%
! GATACTCGATTTTTGCAGTT+AGG + chr3.4:7743594-7743613 None:intergenic 35.0%
! GGACATTTTCTTTTTCCGAA+TGG - chr3.4:7742789-7742808 MS.gene51752:CDS 35.0%
! TAGACATAGATTTTTGCACC+TGG + chr3.4:7743108-7743127 None:intergenic 35.0%
! TCATGGGTTGAAAAAGCAAA+AGG - chr3.4:7743153-7743172 MS.gene51752:CDS 35.0%
! TTTGCAGTTGAAGTATCATG+AGG + chr3.4:7742358-7742377 None:intergenic 35.0%
!! AAACGTACCGATTTAAAAGC+TGG - chr3.4:7742691-7742710 MS.gene51752:CDS 35.0%
!! TATAAGTTGATAAGAGTGCC+TGG - chr3.4:7743195-7743214 MS.gene51752:CDS 35.0%
!!! GTTTTTTCAAGGAATCCTCA+AGG - chr3.4:7742277-7742296 MS.gene51752:CDS 35.0%
AACAGATTTCCAAACGGCAA+AGG + chr3.4:7743232-7743251 None:intergenic 40.0%
AACTTGTAGATGCCAAGGAA+TGG - chr3.4:7742653-7742672 MS.gene51752:CDS 40.0%
AAGTGATACTGGAAGACTCT+CGG + chr3.4:7743319-7743338 None:intergenic 40.0%
AATCCTCAAGGTCAATCTTC+AGG - chr3.4:7742289-7742308 MS.gene51752:CDS 40.0%
ATAATTTATACCGGTCAGGG+TGG - chr3.4:7742955-7742974 MS.gene51752:CDS 40.0%
ATCTCAACTTGTAGATGCCA+AGG - chr3.4:7742648-7742667 MS.gene51752:CDS 40.0%
ATGCAACATGGAGAAAGGAT+TGG + chr3.4:7744001-7744020 None:intergenic 40.0%
ATTGATGCCTTGCATATCCA+GGG - chr3.4:7742853-7742872 MS.gene51752:CDS 40.0%
ATTTGGACTGCTCATGCATT+CGG - chr3.4:7743475-7743494 MS.gene51752:CDS 40.0%
CTAAATGCTTGAAGTGGAGT+CGG + chr3.4:7742397-7742416 None:intergenic 40.0%
GAGGATCTCAATGACAATGA+TGG - chr3.4:7742436-7742455 MS.gene51752:CDS 40.0%
GTCAGATCAGAAGCTTCATA+AGG - chr3.4:7743005-7743024 MS.gene51752:CDS 40.0%
GTCGCTTCTTCTAGTAACTT+AGG + chr3.4:7743837-7743856 None:intergenic 40.0%
GTTAGGAAAACACTGACATG+TGG + chr3.4:7743577-7743596 None:intergenic 40.0%
GTTGAAAAAGCAAAAGGAGG+CGG - chr3.4:7743159-7743178 MS.gene51752:CDS 40.0%
TAATTTATACCGGTCAGGGT+GGG - chr3.4:7742956-7742975 MS.gene51752:CDS 40.0%
TACCATTGTCTCTTTGACCT+GGG + chr3.4:7742573-7742592 None:intergenic 40.0%
TAGGAAAACACTGACATGTG+GGG + chr3.4:7743575-7743594 None:intergenic 40.0%
TATACTTGTCAATGGAACCC+GGG + chr3.4:7742219-7742238 None:intergenic 40.0%
TATCATGAGGTCCACCAAAT+GGG + chr3.4:7742345-7742364 None:intergenic 40.0%
TATGCTTCTTCAATCTGACC+CGG + chr3.4:7742501-7742520 None:intergenic 40.0%
TTACCATTGTCTCTTTGACC+TGG + chr3.4:7742574-7742593 None:intergenic 40.0%
! GGTCAGATTGAAGAAGCATA+AGG - chr3.4:7742501-7742520 MS.gene51752:CDS 40.0%
! GTTGCTCTCCAAATGTTTTC+TGG - chr3.4:7743949-7743968 MS.gene51752:CDS 40.0%
! TGGGTTGAAAAAGCAAAAGG+AGG - chr3.4:7743156-7743175 MS.gene51752:CDS 40.0%
!! ATAAAAGCACCAGCACGAAT+AGG + chr3.4:7743690-7743709 None:intergenic 40.0%
!! GCTTTTATTTGCGAGTATGC+AGG - chr3.4:7743702-7743721 MS.gene51752:CDS 40.0%
!! TCTCCATTTTTCCCATTTGG+TGG - chr3.4:7742331-7742350 MS.gene51752:CDS 40.0%
!! TTCCATTTGGTGCTTCAAAC+CGG + chr3.4:7743622-7743641 None:intergenic 40.0%
ACAGGCTGCCAGAAAACATT+TGG + chr3.4:7743960-7743979 None:intergenic 45.0%
AGAATAAGTCCAGTCCTTGC+AGG + chr3.4:7743276-7743295 None:intergenic 45.0%
AGAATACGACGATGAAGCTG+AGG - chr3.4:7742921-7742940 MS.gene51752:CDS 45.0%
AGATCCTCATCCTCTCCAAA+AGG + chr3.4:7742424-7742443 None:intergenic 45.0%
AGTACCTGGAGTTGAGATTG+GGG - chr3.4:7742768-7742787 MS.gene51752:CDS 45.0%
ATACTTGTCAATGGAACCCG+GGG + chr3.4:7742218-7742237 None:intergenic 45.0%
ATCAAAGATGCTGTGACTCC+AGG - chr3.4:7743087-7743106 MS.gene51752:CDS 45.0%
ATCCTCACTAGACTCGTTTG+TGG + chr3.4:7743859-7743878 None:intergenic 45.0%
CAGTACCTGGAGTTGAGATT+GGG - chr3.4:7742767-7742786 MS.gene51752:CDS 45.0%
CATTTGATGCGCTAAGACGA+AGG - chr3.4:7742623-7742642 MS.gene51752:CDS 45.0%
CGACTCCACTTCAAGCATTT+AGG - chr3.4:7742395-7742414 MS.gene51752:CDS 45.0%
CTACAGCTGCAACTATGTGA+AGG + chr3.4:7743429-7743448 None:intergenic 45.0%
CTTCAGGTCAGTATCCTTCT+GGG - chr3.4:7742305-7742324 MS.gene51752:CDS 45.0%
GAATAAGTCCAGTCCTTGCA+GGG + chr3.4:7743275-7743294 None:intergenic 45.0%
GATCCTCATCCTCTCCAAAA+GGG + chr3.4:7742423-7742442 None:intergenic 45.0%
GATTGATGCCTTGCATATCC+AGG - chr3.4:7742852-7742871 MS.gene51752:CDS 45.0%
GCTGTTAGCATTGTTTCGTC+AGG - chr3.4:7742898-7742917 MS.gene51752:CDS 45.0%
GGTCCACCAAATGGGAAAAA+TGG + chr3.4:7742337-7742356 None:intergenic 45.0%
GGTTTGCATGCTCAATCGAT+GGG - chr3.4:7742826-7742845 MS.gene51752:CDS 45.0%
GTATCATGAGGTCCACCAAA+TGG + chr3.4:7742346-7742365 None:intergenic 45.0%
GTTTGCATGCTCAATCGATG+GGG - chr3.4:7742827-7742846 MS.gene51752:CDS 45.0%
TACCCTCGGTATGATTGGAA+CGG + chr3.4:7744082-7744101 None:intergenic 45.0%
TATTCTTGCTGACCTCTCCT+CGG - chr3.4:7743290-7743309 MS.gene51752:CDS 45.0%
TCACAGCATCTTTGATGCCT+CGG + chr3.4:7743083-7743102 None:intergenic 45.0%
TCACATAGTTGCAGCTGTAG+TGG - chr3.4:7743429-7743448 MS.gene51752:CDS 45.0%
TCAGTACCTGGAGTTGAGAT+TGG - chr3.4:7742766-7742785 MS.gene51752:CDS 45.0%
TCATGCATTCGGAGAAACGA+AGG - chr3.4:7743486-7743505 MS.gene51752:CDS 45.0%
TCGAACAAACACAGCGAAGA+GGG - chr3.4:7742738-7742757 MS.gene51752:CDS 45.0%
TCTGTTCAGAAGTGGAAAGC+TGG - chr3.4:7743246-7743265 MS.gene51752:CDS 45.0%
TCTTCAGGTCAGTATCCTTC+TGG - chr3.4:7742304-7742323 MS.gene51752:CDS 45.0%
TGACCTGAAGATTGACCTTG+AGG + chr3.4:7742295-7742314 None:intergenic 45.0%
TTCGAACAAACACAGCGAAG+AGG - chr3.4:7742737-7742756 MS.gene51752:CDS 45.0%
TTTGCATGCTCAATCGATGG+GGG - chr3.4:7742828-7742847 MS.gene51752:CDS 45.0%
! CAAGCATTTAGGAGCCCTTT+TGG - chr3.4:7742406-7742425 MS.gene51752:CDS 45.0%
! GGTAAAAAAGCATGTGTCCC+TGG - chr3.4:7743450-7743469 MS.gene51752:CDS 45.0%
! GGTTTAGTTGGTATAAGCCC+AGG - chr3.4:7742553-7742572 MS.gene51752:CDS 45.0%
! TCAATGGAGTTCTGGCGAAT+CGG - chr3.4:7743526-7743545 MS.gene51752:CDS 45.0%
! TTGGTGCTTCAAACCGGTTT+GGG + chr3.4:7743616-7743635 None:intergenic 45.0%
!! AACCGGTTTGAAGCACCAAA+TGG - chr3.4:7743617-7743636 MS.gene51752:CDS 45.0%
!! AAGCCGTTGGTTCATGAATG+TGG - chr3.4:7743549-7743568 MS.gene51752:CDS 45.0%
!! ATTTAGGAGCCCTTTTGGAG+AGG - chr3.4:7742411-7742430 MS.gene51752:CDS 45.0%
!! TTTGGTGCTTCAAACCGGTT+TGG + chr3.4:7743617-7743636 None:intergenic 45.0%
AACCTAGTGCCTTTGCCGTT+TGG - chr3.4:7743220-7743239 MS.gene51752:CDS 50.0%
AAGAGGGTAGGATCAGTACC+TGG - chr3.4:7742754-7742773 MS.gene51752:CDS 50.0%
AAGGTTGGGGTCTTCGATCA+TGG - chr3.4:7743661-7743680 MS.gene51752:CDS 50.0%
ACAAACACAGCGAAGAGGGT+AGG - chr3.4:7742742-7742761 MS.gene51752:CDS 50.0%
ACTGCTACCCTCGGTATGAT+TGG + chr3.4:7744087-7744106 None:intergenic 50.0%
AGCCCAGGTCAAAGAGACAA+TGG - chr3.4:7742568-7742587 MS.gene51752:CDS 50.0%
AGGTTGGGGTCTTCGATCAT+GGG - chr3.4:7743662-7743681 MS.gene51752:CDS 50.0%
ATGAGCAGTCCAAATCGCCA+GGG + chr3.4:7743470-7743489 None:intergenic 50.0%
ATGTCCCCAATCTCAACTCC+AGG + chr3.4:7742775-7742794 None:intergenic 50.0%
ATTCTTGCTGACCTCTCCTC+GGG - chr3.4:7743291-7743310 MS.gene51752:CDS 50.0%
CGAACCTGTGTTCCATTCCT+TGG + chr3.4:7742668-7742687 None:intergenic 50.0%
CGGTTTGCATGCTCAATCGA+TGG - chr3.4:7742825-7742844 MS.gene51752:CDS 50.0%
GAAAAAGCAAAAGGAGGCGG+TGG - chr3.4:7743162-7743181 MS.gene51752:CDS 50.0%
GACCACAAACGAGTCTAGTG+AGG - chr3.4:7743854-7743873 MS.gene51752:CDS 50.0%
GACCGTTCCAATCATACCGA+GGG - chr3.4:7744077-7744096 MS.gene51752:CDS 50.0%
GATGCCAAGGAATGGAACAC+AGG - chr3.4:7742661-7742680 MS.gene51752:CDS 50.0%
GGGCCACATTCATGAACCAA+CGG + chr3.4:7743555-7743574 None:intergenic 50.0%
GGGCTCCTAAATGCTTGAAG+TGG + chr3.4:7742403-7742422 None:intergenic 50.0%
GTTGAAATTCCCACCCTGAC+CGG + chr3.4:7742968-7742987 None:intergenic 50.0%
TACGACGATGAAGCTGAGGA+TGG - chr3.4:7742925-7742944 MS.gene51752:CDS 50.0%
TACTTGTCAATGGAACCCGG+GGG + chr3.4:7742217-7742236 None:intergenic 50.0%
TCATGGGATCCTATTCGTGC+TGG - chr3.4:7743678-7743697 MS.gene51752:CDS 50.0%
TGACCGTTCCAATCATACCG+AGG - chr3.4:7744076-7744095 MS.gene51752:CDS 50.0%
TGTGGATCATCAAACTGCCG+TGG - chr3.4:7744134-7744153 MS.gene51752:CDS 50.0%
TTGCATGCTCAATCGATGGG+GGG - chr3.4:7742829-7742848 MS.gene51752:CDS 50.0%
!! TTCCAAACGGCAAAGGCACT+AGG + chr3.4:7743225-7743244 None:intergenic 50.0%
AGCATGTGTCCCTGGCGATT+TGG - chr3.4:7743458-7743477 MS.gene51752:CDS 55.0%
CATGAGCAGTCCAAATCGCC+AGG + chr3.4:7743471-7743490 None:intergenic 55.0%
CGGCAGCATCACATTCAAGC+CGG - chr3.4:7742479-7742498 MS.gene51752:CDS 55.0%
GGCAGCATCACATTCAAGCC+GGG - chr3.4:7742480-7742499 MS.gene51752:CDS 55.0%
TCAACACTCAGTTCCTCCCC+CGG - chr3.4:7742198-7742217 MS.gene51752:CDS 55.0%
TGACCGCGGGGAAGATACTT+TGG - chr3.4:7742876-7742895 MS.gene51752:CDS 55.0%
TGCATGCTCAATCGATGGGG+GGG - chr3.4:7742830-7742849 MS.gene51752:CDS 55.0%
TTGCATATCCAGGGTGACCG+CGG - chr3.4:7742862-7742881 MS.gene51752:CDS 55.0%
TTTGCGTGCACTGCTACCCT+CGG + chr3.4:7744096-7744115 None:intergenic 55.0%
! CAGCCAAAGTATCTTCCCCG+CGG + chr3.4:7742882-7742901 None:intergenic 55.0%
! GGAAAGCTGGTTTCCCTGCA+AGG - chr3.4:7743259-7743278 MS.gene51752:CDS 55.0%
!! GAGCCCTTTTGGAGAGGATG+AGG - chr3.4:7742417-7742436 MS.gene51752:CDS 55.0%
!! GCAAAGGCACTAGGTTGTCC+AGG + chr3.4:7743216-7743235 None:intergenic 55.0%
CAACACTCAGTTCCTCCCCC+GGG - chr3.4:7742199-7742218 MS.gene51752:CDS 60.0%
GAGGGTAGCAGTGCACGCAA+AGG - chr3.4:7744095-7744114 MS.gene51752:CDS 60.0%
GCGGTCACCCTGGATATGCA+AGG + chr3.4:7742863-7742882 None:intergenic 60.0%
GGAGTCGGCATCGCTCTACT+TGG + chr3.4:7742382-7742401 None:intergenic 60.0%
TCTGGCGAATCGGAAGCCGT+TGG - chr3.4:7743536-7743555 MS.gene51752:CDS 60.0%
TGCATATCCAGGGTGACCGC+GGG - chr3.4:7742863-7742882 MS.gene51752:CDS 60.0%
TTGTCAATGGAACCCGGGGG+AGG + chr3.4:7742214-7742233 None:intergenic 60.0%
! GCTGGTTTCCCTGCAAGGAC+TGG - chr3.4:7743264-7743283 MS.gene51752:CDS 60.0%
GCATATCCAGGGTGACCGCG+GGG - chr3.4:7742864-7742883 MS.gene51752:CDS 65.0%
TATCTTCCCCGCGGTCACCC+TGG + chr3.4:7742873-7742892 None:intergenic 65.0%
TGGAAGACTCTCGGCTCCCG+AGG + chr3.4:7743310-7743329 None:intergenic 65.0%
GACTCTCGGCTCCCGAGGAG+AGG + chr3.4:7743305-7743324 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 7742181 7744169 7742181 ID=MS.gene51752
chr3.4 mRNA 7742181 7744169 7742181 ID=MS.gene51752.t1;Parent=MS.gene51752
chr3.4 exon 7742181 7744169 7742181 ID=MS.gene51752.t1.exon1;Parent=MS.gene51752.t1
chr3.4 CDS 7742181 7744169 7742181 ID=cds.MS.gene51752.t1;Parent=MS.gene51752.t1
Gene Sequence

>MS.gene51752

ATGGAAGAAGGGTTAGGTCAACACTCAGTTCCTCCCCCGGGTTCCATTGACAAGTATAAGATTCTGGATATTAAGCCTATAAGAAGTTTGATACCTGTTTTTTCAAGGAATCCTCAAGGTCAATCTTCAGGTCAGTATCCTTCTGGGTTTTCTCCATTTTTCCCATTTGGTGGACCTCATGATACTTCAACTGCAAAGCCAAGTAGAGCGATGCCGACTCCACTTCAAGCATTTAGGAGCCCTTTTGGAGAGGATGAGGATCTCAATGACAATGATGGTTTTAGCAACAAAAGAAGTGCGGCAGCATCACATTCAAGCCGGGTCAGATTGAAGAAGCATAAGGTATATAATGATGTTCATGTTGATATGAGTGGTTTAGTTGGTATAAGCCCAGGTCAAAGAGACAATGGTAACCGTGAAGTTGTTAATATTGTGCTCATGACATTTGATGCGCTAAGACGAAGGCTATCTCAACTTGTAGATGCCAAGGAATGGAACACAGGTTCGATCAAACGTACCGATTTAAAAGCTGGCAATATTTGTATGACCAAAGGAATTCGAACAAACACAGCGAAGAGGGTAGGATCAGTACCTGGAGTTGAGATTGGGGACATTTTCTTTTTCCGAATGGAAATGTGTGTTATCGGTTTGCATGCTCAATCGATGGGGGGGATTGATGCCTTGCATATCCAGGGTGACCGCGGGGAAGATACTTTGGCTGTTAGCATTGTTTCGTCAGGAGAATACGACGATGAAGCTGAGGATGGTGATGTTATAATTTATACCGGTCAGGGTGGGAATTTCAACAAGAAAGATAAGCATGTGTCAGATCAGAAGCTTCATAAGGGTAATCTTGCTTTGGATAGAAGTTCACGAACACACAATGAAATAAGAGTCATCCGAGGCATCAAAGATGCTGTGACTCCAGGTGCAAAAATCTATGTCTATGATGGTCTGTATAAAATTCAAGATTCATGGGTTGAAAAAGCAAAAGGAGGCGGTGGCTTGTTTAAGTATAAGTTGATAAGAGTGCCTGGACAACCTAGTGCCTTTGCCGTTTGGAAATCTGTTCAGAAGTGGAAAGCTGGTTTCCCTGCAAGGACTGGACTTATTCTTGCTGACCTCTCCTCGGGAGCCGAGAGTCTTCCAGTATCACTTGTCAATGAAGTCGATAACGTTAAGTCACCTGCCTTTTTCACATATTTCCACTCTCTTAGACATCCAAAATCATTCAGTTTAATGCAGCCTTCACATAGTTGCAGCTGTAGTGGTAAAAAAGCATGTGTCCCTGGCGATTTGGACTGCTCATGCATTCGGAGAAACGAAGGTGATTTTCCTTATATTATCAATGGAGTTCTGGCGAATCGGAAGCCGTTGGTTCATGAATGTGGCCCCACATGTCAGTGTTTTCCTAACTGCAAAAATCGAGTATCCCAAACCGGTTTGAAGCACCAAATGGAAGTGTTCAAAACAAAGGATAAAGGTTGGGGTCTTCGATCATGGGATCCTATTCGTGCTGGTGCTTTTATTTGCGAGTATGCAGGAGAAGTTATCGATAAAGCTAGGTTAAGTCAGCTTGTACAAGAAGGAGATACTGATGAGTATGTTTTCGATACAACCCGTATTTATGAATCTTTCAAGTGGAATTATGAGCCTAAGTTACTAGAAGAAGCGACCACAAACGAGTCTAGTGAGGATTATGCTTTGCCACACCCTCTTATTATAAATGCTAAGAATGTTGGAAATGTGGCTAGATTCATGAATCATAGTTGCTCTCCAAATGTTTTCTGGCAGCCTGTCTTATACGAAGAGAACAACCAATCCTTTCTCCATGTTGCATTTTTTGCATTGAGACATATTCCACCAATGCATGAGTTAACATATGATTATGGTTCTGACCGTTCCAATCATACCGAGGGTAGCAGTGCACGCAAAGGTAGAAAGAAATGCTTATGTGGATCATCAAACTGCCGTGGTTCTTTTACTTGA
Protein sequence

>MS.gene51752.t1

MEEGLGQHSVPPPGSIDKYKILDIKPIRSLIPVFSRNPQGQSSGQYPSGFSPFFPFGGPHDTSTAKPSRAMPTPLQAFRSPFGEDEDLNDNDGFSNKRSAAASHSSRVRLKKHKVYNDVHVDMSGLVGISPGQRDNGNREVVNIVLMTFDALRRRLSQLVDAKEWNTGSIKRTDLKAGNICMTKGIRTNTAKRVGSVPGVEIGDIFFFRMEMCVIGLHAQSMGGIDALHIQGDRGEDTLAVSIVSSGEYDDEAEDGDVIIYTGQGGNFNKKDKHVSDQKLHKGNLALDRSSRTHNEIRVIRGIKDAVTPGAKIYVYDGLYKIQDSWVEKAKGGGGLFKYKLIRVPGQPSAFAVWKSVQKWKAGFPARTGLILADLSSGAESLPVSLVNEVDNVKSPAFFTYFHSLRHPKSFSLMQPSHSCSCSGKKACVPGDLDCSCIRRNEGDFPYIINGVLANRKPLVHECGPTCQCFPNCKNRVSQTGLKHQMEVFKTKDKGWGLRSWDPIRAGAFICEYAGEVIDKARLSQLVQEGDTDEYVFDTTRIYESFKWNYEPKLLEEATTNESSEDYALPHPLIINAKNVGNVARFMNHSCSPNVFWQPVLYEENNQSFLHVAFFALRHIPPMHELTYDYGSDRSNHTEGSSARKGRKKCLCGSSNCRGSFT