AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene59756

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59756.t1 MTR_8g042750 97.376 686 18 0 12 697 3 688 0.0 1402
MS.gene59756.t1 MTR_3g011440 60.116 687 233 8 13 696 15 663 0.0 847
MS.gene59756.t1 MTR_7g088370 46.164 730 327 14 5 696 3 704 0.0 620
MS.gene59756.t1 MTR_5g013420 40.068 584 318 13 130 696 520 1088 1.23e-126 402
MS.gene59756.t1 MTR_5g013420 40.034 582 317 13 130 694 520 1086 1.85e-125 399
MS.gene59756.t1 MTR_4g010830 38.908 568 324 13 131 694 429 977 1.31e-114 368
MS.gene59756.t1 MTR_8g070070 41.778 450 244 12 229 668 317 758 7.91e-107 342
MS.gene59756.t1 MTR_1g035420 40.159 503 278 14 176 668 158 647 7.71e-106 336
MS.gene59756.t1 MTR_8g070075 40.312 449 250 10 229 667 310 750 5.51e-105 337
MS.gene59756.t1 MTR_8g071030 39.957 463 250 9 221 668 289 738 7.94e-104 333
MS.gene59756.t1 MTR_4g010550 38.990 495 252 14 203 694 14 461 2.38e-101 318
MS.gene59756.t1 MTR_1g035400 37.016 516 285 16 176 668 68 566 1.64e-93 301
MS.gene59756.t1 MTR_6g044690 36.381 525 281 17 176 667 60 564 2.10e-89 290
MS.gene59756.t1 MTR_0376s0030 36.015 522 291 16 173 666 55 561 6.44e-86 281
MS.gene59756.t1 MTR_7g084090 34.442 511 295 13 209 693 257 753 1.10e-84 283
MS.gene59756.t1 MTR_6g061270 34.902 510 293 13 209 693 195 690 1.45e-84 281
MS.gene59756.t1 MTR_6g061200 34.000 500 282 12 209 693 195 661 5.97e-80 268
MS.gene59756.t1 MTR_6g043960 33.471 484 275 16 195 667 35 482 2.06e-70 238
MS.gene59756.t1 MTR_1g048950 33.952 539 294 12 176 694 34 530 1.28e-69 238
MS.gene59756.t1 MTR_7g084090 35.433 381 221 10 209 573 257 628 6.67e-64 224
MS.gene59756.t1 MTR_2g054460 32.115 520 261 18 176 667 9 464 4.58e-62 214
MS.gene59756.t1 MTR_7g445710 31.227 554 270 23 165 692 70 538 7.56e-62 216
MS.gene59756.t1 MTR_7g445530 31.429 525 254 21 165 665 70 512 8.50e-59 207
MS.gene59756.t1 MTR_7g450730 29.699 532 272 17 165 692 67 500 8.65e-54 193
MS.gene59756.t1 MTR_7g052480 33.788 293 181 6 408 693 266 552 1.84e-42 162
MS.gene59756.t1 MTR_1g080340 28.743 334 170 8 410 693 267 582 4.82e-34 138
MS.gene59756.t1 MTR_5g018850 31.532 333 161 12 401 694 1200 1504 3.94e-30 128
MS.gene59756.t1 MTR_7g098390 28.739 341 174 10 404 695 380 700 2.73e-29 124
MS.gene59756.t1 MTR_8g078490 28.571 329 177 8 399 694 947 1250 7.90e-29 124
MS.gene59756.t1 MTR_1g069570 28.274 336 172 9 410 695 428 744 1.15e-28 122
MS.gene59756.t1 MTR_8g078505 30.368 326 172 11 395 692 235 533 1.56e-27 117
MS.gene59756.t1 MTR_4g132610 34.419 215 118 5 481 694 852 1044 1.65e-27 119
MS.gene59756.t1 MTR_7g445600 33.987 153 61 2 513 665 243 355 6.72e-23 101
MS.gene59756.t1 MTR_7g445600 32.955 176 95 8 165 338 66 220 1.71e-12 69.7
MS.gene59756.t1 MTR_1g098000 31.401 207 92 6 498 697 72 235 9.47e-21 96.7
MS.gene59756.t1 MTR_1g098370 31.401 207 92 6 498 697 75 238 1.06e-20 96.7
MS.gene59756.t1 MTR_1g069570 26.894 264 129 7 410 624 428 676 1.04e-17 87.8
MS.gene59756.t1 MTR_0071s0100 26.347 334 166 13 379 697 81 349 3.10e-16 81.6
MS.gene59756.t1 MTR_6g059310 27.094 203 110 5 495 697 87 251 5.30e-14 74.3
MS.gene59756.t1 MTR_6g059310 27.094 203 110 5 495 697 87 251 5.75e-14 74.3
MS.gene59756.t1 MTR_7g445810 31.156 199 108 9 172 364 91 266 2.81e-12 68.2
MS.gene59756.t1 MTR_1g064770 44.444 63 34 1 493 554 28 90 6.51e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59756.t1 AT5G04940 47.076 701 313 9 15 697 10 670 0.0 652
MS.gene59756.t1 AT5G04940 47.076 701 313 9 15 697 10 670 0.0 652
MS.gene59756.t1 AT1G73100 48.186 689 317 8 14 697 16 669 0.0 651
MS.gene59756.t1 AT1G17770 40.725 717 366 21 14 696 1 692 9.39e-156 467
MS.gene59756.t1 AT2G24740 46.211 541 235 13 171 697 257 755 7.37e-147 446
MS.gene59756.t1 AT2G35160 39.591 538 271 16 168 694 261 755 1.41e-109 349
MS.gene59756.t1 AT2G35160 39.591 538 271 16 168 694 297 791 3.62e-109 349
MS.gene59756.t1 AT2G35160 39.591 538 271 16 168 694 297 791 3.62e-109 349
MS.gene59756.t1 AT2G35160 39.591 538 271 16 168 694 297 791 3.62e-109 349
MS.gene59756.t1 AT2G35160 39.591 538 271 16 168 694 297 791 3.62e-109 349
MS.gene59756.t1 AT4G13460 38.142 506 289 12 176 668 145 639 8.83e-108 341
MS.gene59756.t1 AT4G13460 38.142 506 289 12 176 668 145 639 8.83e-108 341
MS.gene59756.t1 AT2G22740 38.302 530 302 12 176 693 270 786 2.74e-106 341
MS.gene59756.t1 AT2G22740 38.302 530 302 12 176 693 270 786 2.74e-106 341
MS.gene59756.t1 AT2G33290 37.575 503 293 11 176 668 149 640 1.81e-102 327
MS.gene59756.t1 AT2G33290 37.575 503 293 11 176 668 149 640 1.81e-102 327
MS.gene59756.t1 AT2G33290 37.575 503 293 11 176 668 149 640 1.81e-102 327
MS.gene59756.t1 AT2G33290 37.575 503 293 11 176 668 149 640 1.81e-102 327
MS.gene59756.t1 AT5G13960 35.185 486 284 12 229 693 11 486 1.76e-84 275
MS.gene59756.t1 AT5G13960 34.646 508 299 13 208 693 124 620 3.20e-84 278
MS.gene59756.t1 AT5G47150 41.509 212 117 4 176 385 118 324 8.27e-44 160
MS.gene59756.t1 AT2G05900 42.857 196 108 3 250 443 1 194 9.57e-42 154
MS.gene59756.t1 AT2G05900 51.163 86 33 1 612 697 236 312 1.31e-21 96.7
MS.gene59756.t1 AT3G04380 28.060 335 170 8 410 693 101 415 5.15e-37 144
MS.gene59756.t1 AT3G04380 28.060 335 170 8 410 693 128 442 5.31e-37 145
MS.gene59756.t1 AT3G04380 28.060 335 170 8 410 693 117 431 5.31e-37 145
MS.gene59756.t1 AT3G04380 28.060 335 170 8 410 693 144 458 6.42e-37 145
MS.gene59756.t1 AT3G04380 28.060 335 170 8 410 693 117 431 7.01e-37 144
MS.gene59756.t1 AT3G04380 28.060 335 170 8 410 693 144 458 7.50e-37 145
MS.gene59756.t1 AT5G47160 41.410 227 122 6 159 381 188 407 9.94e-35 137
MS.gene59756.t1 AT5G47160 41.410 227 122 6 159 381 188 407 9.94e-35 137
MS.gene59756.t1 AT5G47160 41.410 227 122 6 159 381 188 407 9.94e-35 137
MS.gene59756.t1 AT1G04050 28.382 377 183 11 369 693 274 615 2.23e-30 127
MS.gene59756.t1 AT1G04050 28.912 377 181 12 369 693 378 719 3.43e-30 127
MS.gene59756.t1 AT1G04050 28.912 377 181 12 369 693 378 719 3.43e-30 127
MS.gene59756.t1 AT2G23740 30.818 318 168 12 407 696 1088 1381 2.46e-29 125
MS.gene59756.t1 AT2G23740 30.818 318 168 12 407 696 1088 1381 2.46e-29 125
MS.gene59756.t1 AT2G23740 30.818 318 168 12 407 696 1088 1381 2.46e-29 125
MS.gene59756.t1 AT2G23740 30.818 318 168 12 407 696 1081 1374 2.50e-29 125
MS.gene59756.t1 AT5G43990 26.849 365 181 11 379 693 354 682 4.15e-29 124
MS.gene59756.t1 AT5G43990 26.849 365 181 11 379 693 354 682 4.15e-29 124
MS.gene59756.t1 AT5G43990 26.849 365 181 11 379 693 354 682 4.15e-29 124
MS.gene59756.t1 AT5G43990 26.849 365 181 11 379 693 354 682 4.15e-29 124
MS.gene59756.t1 AT5G43990 26.849 365 181 11 379 693 377 705 4.63e-29 124
MS.gene59756.t1 AT5G43990 26.849 365 181 11 379 693 377 705 4.63e-29 124
MS.gene59756.t1 AT5G43990 26.849 365 181 11 379 693 285 613 5.07e-29 123
MS.gene59756.t1 AT5G43990 26.849 365 181 11 379 693 397 725 5.84e-29 123
MS.gene59756.t1 AT5G43990 26.849 365 181 11 379 693 397 725 5.84e-29 123
MS.gene59756.t1 AT5G43990 26.849 365 181 11 379 693 374 702 6.20e-29 123
MS.gene59756.t1 AT5G43990 26.849 365 181 11 379 693 374 702 6.20e-29 123
MS.gene59756.t1 AT5G43990 26.849 365 181 11 379 693 374 702 6.20e-29 123
MS.gene59756.t1 AT5G43990 26.849 365 181 11 379 693 374 702 6.20e-29 123
MS.gene59756.t1 AT5G43990 26.849 365 181 11 379 693 305 633 7.84e-29 122
MS.gene59756.t1 AT5G43990 26.849 365 181 11 379 693 305 633 7.84e-29 122
MS.gene59756.t1 AT5G43990 26.849 365 181 11 379 693 305 633 7.84e-29 122
MS.gene59756.t1 AT5G43990 26.849 365 181 11 379 693 305 633 7.84e-29 122
MS.gene59756.t1 AT2G23740 31.301 246 122 11 407 624 1088 1314 5.70e-20 95.9
MS.gene59756.t1 AT2G23740 31.301 246 122 11 407 624 1088 1314 5.70e-20 95.9
MS.gene59756.t1 AT3G03750 30.396 227 131 8 471 694 145 347 5.65e-19 89.7
MS.gene59756.t1 AT4G30860 28.643 199 102 5 499 697 307 465 2.46e-14 76.6
MS.gene59756.t1 AT3G03750 27.556 225 124 8 471 694 145 331 2.30e-13 72.4
MS.gene59756.t1 AT3G59960 28.333 180 87 6 520 697 111 250 6.27e-11 64.3
MS.gene59756.t1 AT3G59960 28.333 180 87 6 520 697 111 250 6.27e-11 64.3
MS.gene59756.t1 AT3G59960 28.333 180 87 6 520 697 111 250 6.27e-11 64.3

Find 160 sgRNAs with CRISPR-Local

Find 189 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTTATGCTGCTTGGAAAT+TGG 0.240702 8.3:-55506694 MS.gene59756:CDS
CTCTTTCAATCCAAGAATCT+TGG 0.247325 8.3:+55506775 None:intergenic
GAACTCTTGTAGGCCCTTAT+TGG 0.250077 8.3:+55507560 None:intergenic
GCACTAGACCAAAAGGTTTC+GGG 0.260116 8.3:+55506520 None:intergenic
AGCTATATTTCCCACATTCT+TGG 0.262990 8.3:+55506020 None:intergenic
AACACGGATTGAACATGTTT+TGG 0.288137 8.3:+55507758 None:intergenic
GCATCAAGAGGGGTTTCTTC+AGG 0.301685 8.3:+55507659 None:intergenic
TGCACTAGACCAAAAGGTTT+CGG 0.303413 8.3:+55506519 None:intergenic
TGGTGCCTGGGATTGAGATT+GGG 0.314399 8.3:-55507154 MS.gene59756:CDS
GTGGTGCCTGGGATTGAGAT+TGG 0.321695 8.3:-55507155 MS.gene59756:CDS
TTCTTGGCACTTATAATTAG+AGG 0.323045 8.3:+55506036 None:intergenic
TTCATCATGTGAACTCTTGT+AGG 0.336128 8.3:+55507550 None:intergenic
CCATTGGAGGAATATGTCTA+AGG 0.339713 8.3:+55505902 None:intergenic
TATATAAAATCCAAGATTCT+TGG 0.344747 8.3:-55506785 MS.gene59756:CDS
GCAGAGTTAACATATGATTA+TGG 0.349411 8.3:-55505880 MS.gene59756:CDS
AGAAGAGCGGGCGTGGTGCC+TGG 0.355977 8.3:-55507167 MS.gene59756:CDS
GCAAAGTGCCGTGGTTTCTT+TGG 0.357611 8.3:-55505787 MS.gene59756:CDS
GAATTATGAACCTAGCTTAC+TGG 0.368503 8.3:-55506106 MS.gene59756:CDS
CTGCCAAAGTGACTCCAATA+AGG 0.379826 8.3:-55507574 MS.gene59756:CDS
CAGAACAAAGGGTAGAGGTT+GGG 0.385564 8.3:-55506280 MS.gene59756:CDS
TTCTTGCTGACCTCTCCAAT+GGG 0.387936 8.3:-55506629 MS.gene59756:CDS
GATTATTCGGAAGGGTTTGT+AGG 0.392820 8.3:-55507494 MS.gene59756:CDS
ACTTGAATGGTTCATAAATA+CGG 0.393021 8.3:+55506130 None:intergenic
TCAAAGAGGTAATCTTGCTT+TGG 0.393398 8.3:-55506901 MS.gene59756:CDS
GAGTATCAAGGATGGATCTA+AGG 0.393584 8.3:-55507057 MS.gene59756:CDS
GGAGTCACTTTGGCAGCAAC+AGG 0.394355 8.3:+55507581 None:intergenic
AGAATACTATTTGCAGTATA+CGG 0.394436 8.3:+55506411 None:intergenic
GGTTCATAATTCCACTTGAA+TGG 0.395912 8.3:+55506117 None:intergenic
ACATCATTGACAAGTGATAC+TGG 0.398710 8.3:+55506594 None:intergenic
TGGATTGAAAGAGGGAAATC+TGG 0.399448 8.3:-55506765 MS.gene59756:CDS
AGTAATGCTTTGACTTGTAA+AGG 0.409168 8.3:-55507209 MS.gene59756:CDS
GTTGTTTCGTCAGGTGTATA+TGG 0.410656 8.3:-55507014 MS.gene59756:CDS
CTGTTGGAAGAGGAATTTGA+TGG 0.415526 8.3:+55507684 None:intergenic
GCGTTAAGCGTTGTTTCGTC+AGG 0.419354 8.3:-55507023 MS.gene59756:CDS
TGGAGATAACGATGATTATT+CGG 0.420044 8.3:-55507507 MS.gene59756:CDS
AGAACAAAGGGTAGAGGTTG+GGG 0.428660 8.3:-55506279 MS.gene59756:CDS
ATTCTTGCTGACCTCTCCAA+TGG 0.429575 8.3:-55506630 MS.gene59756:CDS
CACTAAAAGATGATGGTGAT+AGG 0.431343 8.3:-55507349 MS.gene59756:CDS
GTAATGCTTTGACTTGTAAA+GGG 0.433132 8.3:-55507208 MS.gene59756:CDS
ACTGCAAGGAGTTTCTTAGA+AGG 0.433269 8.3:-55507436 MS.gene59756:CDS
GTTGCTGCTGCTGCTTTCAC+CGG 0.434820 8.3:+55507617 None:intergenic
CACGAGGAGAAGAGCGGGCG+TGG 0.458603 8.3:-55507174 MS.gene59756:CDS
CGAATGGAAATGTGTCTTGT+GGG 0.460019 8.3:-55507116 MS.gene59756:CDS
CAAGATTCTTGGATTGAAAG+AGG 0.462943 8.3:-55506774 MS.gene59756:CDS
GCATTTCTTTCTCCTTCTAA+AGG 0.463277 8.3:+55505822 None:intergenic
GGGTTTGCATGCTCAATCAA+TGG 0.467421 8.3:-55507096 MS.gene59756:CDS
TGCCAAAGTGACTCCAATAA+GGG 0.473252 8.3:-55507573 MS.gene59756:CDS
GGTTTGACAAATGAGTAAAA+TGG 0.474364 8.3:+55507707 None:intergenic
ATTACCCATGCTGGTCATGC+TGG 0.474621 8.3:-55505856 MS.gene59756:CDS
TTTCTGGTGGATACCCATCT+GGG 0.476462 8.3:-55507736 MS.gene59756:CDS
AACAGGTGCTAAACTACGTA+AGG 0.476974 8.3:+55507784 None:intergenic
CTTACATCTTCCAGTAAGCT+AGG 0.477855 8.3:+55506096 None:intergenic
TTACAATTGCAGCTTAAAGA+AGG 0.477858 8.3:+55506495 None:intergenic
ATAAAAGTACCAGCACGTAT+AGG 0.483482 8.3:+55506240 None:intergenic
GAAGAGCGGGCGTGGTGCCT+GGG 0.483938 8.3:-55507166 MS.gene59756:CDS
TATTTAAGTATAAGTTGGTA+AGG 0.490370 8.3:-55506734 MS.gene59756:CDS
GGGGTTTCTTCAGGTTCTGT+TGG 0.497837 8.3:+55507668 None:intergenic
CATGAACAGTTCAAATCACC+TGG 0.499372 8.3:+55506459 None:intergenic
GAGGTAGCAGTGCCTTTAGA+AGG 0.502063 8.3:-55505834 MS.gene59756:CDS
GGCCCTTATTGGAGTCACTT+TGG 0.502624 8.3:+55507571 None:intergenic
ACCTCCAGCATGACCAGCAT+GGG 0.504841 8.3:+55505852 None:intergenic
TTCATGCATTCAAAGAAATG+AGG 0.505419 8.3:-55506442 MS.gene59756:CDS
GCACTTATAATTAGAGGAGA+TGG 0.508609 8.3:+55506042 None:intergenic
GAAGGCTGCACTAGACCAAA+AGG 0.511466 8.3:+55506513 None:intergenic
TGGTATATTTAAGTATAAGT+TGG 0.512381 8.3:-55506739 MS.gene59756:CDS
TTCAACATTCTGATATACCT+TGG 0.513102 8.3:+55506185 None:intergenic
CGGCTACTTTGGCATCAAGA+GGG 0.513820 8.3:+55507648 None:intergenic
TCTTCAGGTTCTGTTGGAAG+AGG 0.514865 8.3:+55507674 None:intergenic
CTTGGAAATTGGCTCAAAAG+TGG 0.515222 8.3:-55506683 MS.gene59756:CDS
AAGGTATATCAGAATGTTGA+AGG 0.517616 8.3:-55506183 MS.gene59756:CDS
TGGAATACTTTCAACCCCAT+TGG 0.517944 8.3:+55506614 None:intergenic
TCATATGTTAACTCTGCCAT+TGG 0.520039 8.3:+55505886 None:intergenic
ATGGAAGTGTTCAGAACAAA+GGG 0.520947 8.3:-55506291 MS.gene59756:CDS
TATGTTAACTCTGCCATTGG+AGG 0.521537 8.3:+55505889 None:intergenic
AATAAAACCATTCCTTGTAC+AGG 0.521861 8.3:+55506650 None:intergenic
TATAAGTTGGTAAGGTTACC+TGG 0.522467 8.3:-55506726 MS.gene59756:CDS
ACTCGCGAGGCGTCTGTTGG+TGG 0.525728 8.3:-55507401 MS.gene59756:CDS
GGAAGGCAGGTTCCTGTACA+AGG 0.528660 8.3:-55506662 MS.gene59756:CDS
GATAACGATGATTATTCGGA+AGG 0.530602 8.3:-55507503 MS.gene59756:CDS
TGTAACACAGCATGTGTCCC+AGG 0.534817 8.3:-55506477 MS.gene59756:CDS
TCGGCTACTTTGGCATCAAG+AGG 0.534991 8.3:+55507647 None:intergenic
AACAAACACGAGGAGAAGAG+CGG 0.537646 8.3:-55507180 MS.gene59756:CDS
GCAGGTTCCTGTACAAGGAA+TGG 0.539532 8.3:-55506657 MS.gene59756:CDS
AATTATAAGTGCCAAGAATG+TGG 0.540601 8.3:-55506031 MS.gene59756:CDS
TCGAATGGAAATGTGTCTTG+TGG 0.542415 8.3:-55507117 MS.gene59756:CDS
TGTTGGAAGAGGAATTTGAT+GGG 0.543447 8.3:+55507685 None:intergenic
TTGGCTCAAAAGTGGAAGGC+AGG 0.546449 8.3:-55506675 MS.gene59756:CDS
CCTTAGACATATTCCTCCAA+TGG 0.547540 8.3:-55505902 MS.gene59756:CDS
GGTTTGCATGCTCAATCAAT+GGG 0.548358 8.3:-55507095 MS.gene59756:CDS
ACTAAAAGATGATGGTGATA+GGG 0.551648 8.3:-55507348 MS.gene59756:CDS
CAAATAGTATTCTAGTGAGT+CGG 0.552747 8.3:-55506401 MS.gene59756:CDS
AAGATTCTTGGATTGAAAGA+GGG 0.554674 8.3:-55506773 MS.gene59756:CDS
TCAGAACAAAGGGTAGAGGT+TGG 0.558625 8.3:-55506281 MS.gene59756:CDS
GGTGCCTGGGATTGAGATTG+GGG 0.558794 8.3:-55507153 MS.gene59756:CDS
GATTATGGAATTACCCATGC+TGG 0.562248 8.3:-55505865 MS.gene59756:CDS
AACCCGACACTAAAAGATGA+TGG 0.564385 8.3:-55507356 MS.gene59756:CDS
GTAGGAAAACACCGACACAT+AGG 0.564832 8.3:+55506354 None:intergenic
ACATCCCCAATCTCAATCCC+AGG 0.570470 8.3:+55507149 None:intergenic
TACCTCCAGCATGACCAGCA+TGG 0.572482 8.3:+55505851 None:intergenic
TAGGAAAACACCGACACATA+GGG 0.573999 8.3:+55506355 None:intergenic
TAAAATGGAGGAAACCCAGA+TGG 0.574940 8.3:+55507722 None:intergenic
GATGAAGTTAGAGTCATTCG+AGG 0.576279 8.3:-55506858 MS.gene59756:CDS
GGCTACTTTGGCATCAAGAG+GGG 0.578550 8.3:+55507649 None:intergenic
ATTATAAGTGCCAAGAATGT+GGG 0.579471 8.3:-55506030 MS.gene59756:CDS
GAAATGAATCAACAAGGCGA+TGG 0.581588 8.3:-55507527 MS.gene59756:CDS
GTGTTCAGAACAAAGGGTAG+AGG 0.581999 8.3:-55506285 MS.gene59756:CDS
TGACGTTTGATTCAATTCGA+AGG 0.582508 8.3:-55507304 MS.gene59756:CDS
TACTTTCAACCCCATTGGAG+AGG 0.582710 8.3:+55506619 None:intergenic
AAGCCGCTTATTCATGAATG+TGG 0.582827 8.3:-55506378 MS.gene59756:CDS
TTGACAAATGAGTAAAATGG+AGG 0.583789 8.3:+55507710 None:intergenic
AAAACTCGCGAGGCGTCTGT+TGG 0.584341 8.3:-55507404 MS.gene59756:CDS
GTTCCTTCGACTCTTCAAGT+TGG 0.586309 8.3:+55507273 None:intergenic
ACACTGGATCCTATACGTGC+TGG 0.589618 8.3:-55506249 MS.gene59756:CDS
GGTGGTACGAGTTCTTATGT+TGG 0.589976 8.3:-55507383 MS.gene59756:CDS
CATTGGAGGAATATGTCTAA+GGG 0.591612 8.3:+55505903 None:intergenic
AATTGATTATATGAGTATCA+AGG 0.594679 8.3:-55507069 MS.gene59756:CDS
CATGGAAGTGTTCAGAACAA+AGG 0.594814 8.3:-55506292 MS.gene59756:CDS
CAATGATGTCGATGATGAGA+AGG 0.596174 8.3:-55506580 MS.gene59756:CDS
ACAAACACGAGGAGAAGAGC+GGG 0.596233 8.3:-55507179 MS.gene59756:CDS
ATAACGATGATTATTCGGAA+GGG 0.598556 8.3:-55507502 MS.gene59756:CDS
GACTGGTTTAAAACAACACA+TGG 0.599479 8.3:-55506310 MS.gene59756:CDS
AGAAGTTATTAACAGAGCCA+AGG 0.601057 8.3:-55506202 MS.gene59756:CDS
TCATGCATTCAAAGAAATGA+GGG 0.603338 8.3:-55506441 MS.gene59756:CDS
CGTTTGATTCAATTCGAAGG+AGG 0.603429 8.3:-55507301 MS.gene59756:CDS
GTATTTATGAACCATTCAAG+TGG 0.607961 8.3:-55506128 MS.gene59756:CDS
GAAATTGGCTCAAAAGTGGA+AGG 0.609566 8.3:-55506679 MS.gene59756:CDS
AGGAGAAAGAAATGCTTGTG+TGG 0.611149 8.3:-55505814 MS.gene59756:CDS
GAACAAAGGGTAGAGGTTGG+GGG 0.611366 8.3:-55506278 MS.gene59756:CDS
TGATAAACGAAAGCGTAGCA+CGG 0.612728 8.3:-55507471 MS.gene59756:CDS
GATTATATGAGTATCAAGGA+TGG 0.613333 8.3:-55507065 MS.gene59756:CDS
GGAGAAAGAAATGCTTGTGT+GGG 0.619249 8.3:-55505813 MS.gene59756:CDS
ATGCCAACTTGAAGAGTCGA+AGG 0.621780 8.3:-55507276 MS.gene59756:CDS
ACCCATGCTGGTCATGCTGG+AGG 0.621845 8.3:-55505853 MS.gene59756:CDS
GTTGGAAGAGGAATTTGATG+GGG 0.621967 8.3:+55507686 None:intergenic
TCTTGCTGACCTCTCCAATG+GGG 0.629627 8.3:-55506628 MS.gene59756:CDS
GAAAGAGGGAAATCTGGCGG+TGG 0.632493 8.3:-55506759 MS.gene59756:CDS
AAGTTCAAATGTATGTAGTG+AGG 0.636973 8.3:-55506076 MS.gene59756:CDS
TGGGTATCCACCAGAAAACA+CGG 0.640101 8.3:+55507742 None:intergenic
AAAATGGAGGAAACCCAGAT+GGG 0.640580 8.3:+55507723 None:intergenic
GGGCCACATTCATGAATAAG+CGG 0.645886 8.3:+55506375 None:intergenic
TTGGCAGCCAGTCTTATATG+CGG 0.646377 8.3:-55505962 MS.gene59756:CDS
TATCAAGGATGGATCTAAGG+AGG 0.648003 8.3:-55507054 MS.gene59756:CDS
TGCACTTGCTATCAAGCGTG+CGG 0.648738 8.3:-55507243 MS.gene59756:CDS
ACTGATCAGAAGCTTCAAAG+AGG 0.649359 8.3:-55506915 MS.gene59756:CDS
TTGCATGCTCAATCAATGGG+TGG 0.651570 8.3:-55507092 MS.gene59756:CDS
ACAGGTGCTAAACTACGTAA+GGG 0.655052 8.3:+55507785 None:intergenic
TGTATATGGTGATGATACAG+AGG 0.665371 8.3:-55507000 MS.gene59756:CDS
GAAGAAGAACAAAACTCGCG+AGG 0.668453 8.3:-55507414 MS.gene59756:CDS
TGTGGGTCAGCAAAGTGCCG+TGG 0.671789 8.3:-55505796 MS.gene59756:CDS
ATGAATGTGGCCCTATGTGT+CGG 0.674340 8.3:-55506365 MS.gene59756:CDS
CAAAGTAGCCGAGAAAACGC+CGG 0.676869 8.3:-55507636 MS.gene59756:CDS
TGGATCTAAGGAGGATACTG+TGG 0.679943 8.3:-55507045 MS.gene59756:CDS
CTTTGGACAGAAGTGCACAT+CGG 0.680683 8.3:-55506884 MS.gene59756:CDS
AATGATGTCGATGATGAGAA+GGG 0.683211 8.3:-55506579 MS.gene59756:CDS
GGATAATATTGAGAACTGCA+AGG 0.691492 8.3:-55507450 MS.gene59756:CDS
ATTGTTAACCAAAGAAACCA+CGG 0.691606 8.3:+55505779 None:intergenic
GATGAAGAAATGAATCAACA+AGG 0.703890 8.3:-55507533 MS.gene59756:CDS
ATTGAAAGAGGGAAATCTGG+CGG 0.710427 8.3:-55506762 MS.gene59756:CDS
ATGAACAGTTCAAATCACCT+GGG 0.723585 8.3:+55506460 None:intergenic
AAGGGTTTAAAACAAACACG+AGG 0.770459 8.3:-55507190 MS.gene59756:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAATGTTTTAATTTATAG+TGG - chr8.3:55506662-55506681 MS.gene59756:CDS 10.0%
!! AATTGATTATATGAGTATCA+AGG - chr8.3:55506568-55506587 MS.gene59756:CDS 20.0%
!! TATATAAAATCCAAGATTCT+TGG - chr8.3:55506852-55506871 MS.gene59756:CDS 20.0%
!! TCAAAAATCTATATGTATGA+TGG - chr8.3:55506827-55506846 MS.gene59756:CDS 20.0%
!! TGGTATATTTAAGTATAAGT+TGG - chr8.3:55506898-55506917 MS.gene59756:CDS 20.0%
!!! TATTTAAGTATAAGTTGGTA+AGG - chr8.3:55506903-55506922 MS.gene59756:CDS 20.0%
! AAAAAATGCAATGTGGATAA+AGG + chr8.3:55507713-55507732 None:intergenic 25.0%
! ACTTGAATGGTTCATAAATA+CGG + chr8.3:55507510-55507529 None:intergenic 25.0%
! AGAATACTATTTGCAGTATA+CGG + chr8.3:55507229-55507248 None:intergenic 25.0%
!! ATTTTTGAACTTCTATTCAC+AGG + chr8.3:55506815-55506834 None:intergenic 25.0%
!!! GTTTTAATTTATAGTGGTCA+GGG - chr8.3:55506668-55506687 MS.gene59756:CDS 25.0%
!!! TGTTTTAATTTATAGTGGTC+AGG - chr8.3:55506667-55506686 MS.gene59756:CDS 25.0%
AAAAAATTGCTTATGCTGCT+TGG - chr8.3:55506936-55506955 MS.gene59756:CDS 30.0%
AAGATTCTTGGATTGAAAGA+GGG - chr8.3:55506864-55506883 MS.gene59756:CDS 30.0%
AAGGTATATCAGAATGTTGA+AGG - chr8.3:55507454-55507473 MS.gene59756:CDS 30.0%
AAGTTCAAATGTATGTAGTG+AGG - chr8.3:55507561-55507580 MS.gene59756:CDS 30.0%
AATAAAACCATTCCTTGTAC+AGG + chr8.3:55506990-55507009 None:intergenic 30.0%
AATTATAAGTGCCAAGAATG+TGG - chr8.3:55507606-55507625 MS.gene59756:CDS 30.0%
ATAACGATGATTATTCGGAA+GGG - chr8.3:55506135-55506154 MS.gene59756:CDS 30.0%
ATTATAAGTGCCAAGAATGT+GGG - chr8.3:55507607-55507626 MS.gene59756:CDS 30.0%
CAAATAGTATTCTAGTGAGT+CGG - chr8.3:55507236-55507255 MS.gene59756:CDS 30.0%
GATGAAGAAATGAATCAACA+AGG - chr8.3:55506104-55506123 MS.gene59756:CDS 30.0%
GATTATATGAGTATCAAGGA+TGG - chr8.3:55506572-55506591 MS.gene59756:CDS 30.0%
GCAGAGTTAACATATGATTA+TGG - chr8.3:55507757-55507776 MS.gene59756:CDS 30.0%
GGTTTGACAAATGAGTAAAA+TGG + chr8.3:55505933-55505952 None:intergenic 30.0%
GTATTTATGAACCATTCAAG+TGG - chr8.3:55507509-55507528 MS.gene59756:CDS 30.0%
GTGAAATAAGTGAAAAAAGC+AGG + chr8.3:55507085-55507104 None:intergenic 30.0%
TCATGCATTCAAAGAAATGA+GGG - chr8.3:55507196-55507215 MS.gene59756:CDS 30.0%
TGGAGATAACGATGATTATT+CGG - chr8.3:55506130-55506149 MS.gene59756:CDS 30.0%
TTACAATTGCAGCTTAAAGA+AGG + chr8.3:55507145-55507164 None:intergenic 30.0%
TTCAACATTCTGATATACCT+TGG + chr8.3:55507455-55507474 None:intergenic 30.0%
TTCATGCATTCAAAGAAATG+AGG - chr8.3:55507195-55507214 MS.gene59756:CDS 30.0%
TTCTTGGCACTTATAATTAG+AGG + chr8.3:55507604-55507623 None:intergenic 30.0%
TTGACAAATGAGTAAAATGG+AGG + chr8.3:55505930-55505949 None:intergenic 30.0%
! ACTAAAAGATGATGGTGATA+GGG - chr8.3:55506289-55506308 MS.gene59756:CDS 30.0%
! TTATTTTCCGCATATAAGAC+TGG + chr8.3:55507685-55507704 None:intergenic 30.0%
!! ACTTTTATTTGTGAGTATGC+AGG - chr8.3:55507412-55507431 MS.gene59756:CDS 30.0%
!! AGTAATGCTTTGACTTGTAA+AGG - chr8.3:55506428-55506447 MS.gene59756:CDS 30.0%
!! GTAATGCTTTGACTTGTAAA+GGG - chr8.3:55506429-55506448 MS.gene59756:CDS 30.0%
!!! GGATGTTTTCTTTTTTCGAA+TGG - chr8.3:55506505-55506524 MS.gene59756:CDS 30.0%
!!! TGAACATGTTTTGGTAAAAC+AGG + chr8.3:55505873-55505892 None:intergenic 30.0%
AAAAATCGAGTATCACAGAC+TGG - chr8.3:55507310-55507329 MS.gene59756:CDS 35.0%
AATGATGTCGATGATGAGAA+GGG - chr8.3:55507058-55507077 MS.gene59756:CDS 35.0%
ACATCATTGACAAGTGATAC+TGG + chr8.3:55507046-55507065 None:intergenic 35.0%
AGAAGTTATTAACAGAGCCA+AGG - chr8.3:55507435-55507454 MS.gene59756:CDS 35.0%
AGCTATATTTCCCACATTCT+TGG + chr8.3:55507620-55507639 None:intergenic 35.0%
ATGAACAGTTCAAATCACCT+GGG + chr8.3:55507180-55507199 None:intergenic 35.0%
CAAGATTCTTGGATTGAAAG+AGG - chr8.3:55506863-55506882 MS.gene59756:CDS 35.0%
CATTGGAGGAATATGTCTAA+GGG + chr8.3:55507737-55507756 None:intergenic 35.0%
CTCTTTCAATCCAAGAATCT+TGG + chr8.3:55506865-55506884 None:intergenic 35.0%
GAATTATGAACCTAGCTTAC+TGG - chr8.3:55507531-55507550 MS.gene59756:CDS 35.0%
GATAACGATGATTATTCGGA+AGG - chr8.3:55506134-55506153 MS.gene59756:CDS 35.0%
GCACTTATAATTAGAGGAGA+TGG + chr8.3:55507598-55507617 None:intergenic 35.0%
GCATTTCTTTCTCCTTCTAA+AGG + chr8.3:55507818-55507837 None:intergenic 35.0%
GGATAATATTGAGAACTGCA+AGG - chr8.3:55506187-55506206 MS.gene59756:CDS 35.0%
GGTTCATAATTCCACTTGAA+TGG + chr8.3:55507523-55507542 None:intergenic 35.0%
TAAGGGCAAAAAATGCAATG+TGG + chr8.3:55507720-55507739 None:intergenic 35.0%
TCAAAGAGGTAATCTTGCTT+TGG - chr8.3:55506736-55506755 MS.gene59756:CDS 35.0%
TCATATGTTAACTCTGCCAT+TGG + chr8.3:55507754-55507773 None:intergenic 35.0%
TGACGTTTGATTCAATTCGA+AGG - chr8.3:55506333-55506352 MS.gene59756:CDS 35.0%
TGTTGGAAGAGGAATTTGAT+GGG + chr8.3:55505955-55505974 None:intergenic 35.0%
TTCATCATGTGAACTCTTGT+AGG + chr8.3:55506090-55506109 None:intergenic 35.0%
! AAGGGTTTAAAACAAACACG+AGG - chr8.3:55506447-55506466 MS.gene59756:CDS 35.0%
! CACTAAAAGATGATGGTGAT+AGG - chr8.3:55506288-55506307 MS.gene59756:CDS 35.0%
! TCACCATCATCTTTTAGTGT+CGG + chr8.3:55506287-55506306 None:intergenic 35.0%
! TGTATATGGTGATGATACAG+AGG - chr8.3:55506637-55506656 MS.gene59756:CDS 35.0%
!! AACACGGATTGAACATGTTT+TGG + chr8.3:55505882-55505901 None:intergenic 35.0%
!! ATAAAAGTACCAGCACGTAT+AGG + chr8.3:55507400-55507419 None:intergenic 35.0%
!! ATGGAAGTGTTCAGAACAAA+GGG - chr8.3:55507346-55507365 MS.gene59756:CDS 35.0%
!! GACTGGTTTAAAACAACACA+TGG - chr8.3:55507327-55507346 MS.gene59756:CDS 35.0%
!! TATAAGTTGGTAAGGTTACC+TGG - chr8.3:55506911-55506930 MS.gene59756:CDS 35.0%
!!! GCATAAGCAATTTTTTGACC+AGG + chr8.3:55506932-55506951 None:intergenic 35.0%
AAAATGGAGGAAACCCAGAT+GGG + chr8.3:55505917-55505936 None:intergenic 40.0%
AACAGGTGCTAAACTACGTA+AGG + chr8.3:55505856-55505875 None:intergenic 40.0%
AACCCGACACTAAAAGATGA+TGG - chr8.3:55506281-55506300 MS.gene59756:CDS 40.0%
AAGCCGCTTATTCATGAATG+TGG - chr8.3:55507259-55507278 MS.gene59756:CDS 40.0%
ACAGGTGCTAAACTACGTAA+GGG + chr8.3:55505855-55505874 None:intergenic 40.0%
ACTGATCAGAAGCTTCAAAG+AGG - chr8.3:55506722-55506741 MS.gene59756:CDS 40.0%
ACTGCAAGGAGTTTCTTAGA+AGG - chr8.3:55506201-55506220 MS.gene59756:CDS 40.0%
ACTGGCTGCCAAAAAACATT+TGG + chr8.3:55507667-55507686 None:intergenic 40.0%
AGGAGAAAGAAATGCTTGTG+TGG - chr8.3:55507823-55507842 MS.gene59756:CDS 40.0%
ATTGAAAGAGGGAAATCTGG+CGG - chr8.3:55506875-55506894 MS.gene59756:CDS 40.0%
CAATGATGTCGATGATGAGA+AGG - chr8.3:55507057-55507076 MS.gene59756:CDS 40.0%
CATGAACAGTTCAAATCACC+TGG + chr8.3:55507181-55507200 None:intergenic 40.0%
CCATTGGAGGAATATGTCTA+AGG + chr8.3:55507738-55507757 None:intergenic 40.0%
CCTTAGACATATTCCTCCAA+TGG - chr8.3:55507735-55507754 MS.gene59756:CDS 40.0%
CGAATGGAAATGTGTCTTGT+GGG - chr8.3:55506521-55506540 MS.gene59756:CDS 40.0%
CGTTTGATTCAATTCGAAGG+AGG - chr8.3:55506336-55506355 MS.gene59756:CDS 40.0%
CTGGCTGCCAAAAAACATTT+GGG + chr8.3:55507666-55507685 None:intergenic 40.0%
CTGTTGGAAGAGGAATTTGA+TGG + chr8.3:55505956-55505975 None:intergenic 40.0%
CTTACATCTTCCAGTAAGCT+AGG + chr8.3:55507544-55507563 None:intergenic 40.0%
GAAATGAATCAACAAGGCGA+TGG - chr8.3:55506110-55506129 MS.gene59756:CDS 40.0%
GAGTATCAAGGATGGATCTA+AGG - chr8.3:55506580-55506599 MS.gene59756:CDS 40.0%
GATGAAGTTAGAGTCATTCG+AGG - chr8.3:55506779-55506798 MS.gene59756:CDS 40.0%
GATTATGGAATTACCCATGC+TGG - chr8.3:55507772-55507791 MS.gene59756:CDS 40.0%
GATTATTCGGAAGGGTTTGT+AGG - chr8.3:55506143-55506162 MS.gene59756:CDS 40.0%
GGAGAAAGAAATGCTTGTGT+GGG - chr8.3:55507824-55507843 MS.gene59756:CDS 40.0%
GGTTTGCATGCTCAATCAAT+GGG - chr8.3:55506542-55506561 MS.gene59756:CDS 40.0%
GTTGGAAGAGGAATTTGATG+GGG + chr8.3:55505954-55505973 None:intergenic 40.0%
TAAAATGGAGGAAACCCAGA+TGG + chr8.3:55505918-55505937 None:intergenic 40.0%
TAGGAAAACACCGACACATA+GGG + chr8.3:55507285-55507304 None:intergenic 40.0%
TATCAAGGATGGATCTAAGG+AGG - chr8.3:55506583-55506602 MS.gene59756:CDS 40.0%
TATGTTAACTCTGCCATTGG+AGG + chr8.3:55507751-55507770 None:intergenic 40.0%
TCGAATGGAAATGTGTCTTG+TGG - chr8.3:55506520-55506539 MS.gene59756:CDS 40.0%
TGCACTAGACCAAAAGGTTT+CGG + chr8.3:55507121-55507140 None:intergenic 40.0%
TGCCAAAGTGACTCCAATAA+GGG - chr8.3:55506064-55506083 MS.gene59756:CDS 40.0%
TGGAATACTTTCAACCCCAT+TGG + chr8.3:55507026-55507045 None:intergenic 40.0%
TGGATTGAAAGAGGGAAATC+TGG - chr8.3:55506872-55506891 MS.gene59756:CDS 40.0%
TGGCTGCCAAAAAACATTTG+GGG + chr8.3:55507665-55507684 None:intergenic 40.0%
! CACCATCATCTTTTAGTGTC+GGG + chr8.3:55506286-55506305 None:intergenic 40.0%
! CATGTTCAATCCGTGTTTTC+TGG - chr8.3:55505885-55505904 MS.gene59756:CDS 40.0%
! CTCAAAAACCCGAAACCTTT+TGG - chr8.3:55507109-55507128 MS.gene59756:CDS 40.0%
! CTGTGATACTCGATTTTTGC+AGG + chr8.3:55507308-55507327 None:intergenic 40.0%
! CTTGGAAATTGGCTCAAAAG+TGG - chr8.3:55506954-55506973 MS.gene59756:CDS 40.0%
! GAAATTGGCTCAAAAGTGGA+AGG - chr8.3:55506958-55506977 MS.gene59756:CDS 40.0%
! GATACTCGATTTTTGCAGGT+AGG + chr8.3:55507304-55507323 None:intergenic 40.0%
! GTTGTTTCGTCAGGTGTATA+TGG - chr8.3:55506623-55506642 MS.gene59756:CDS 40.0%
! TGATAAACGAAAGCGTAGCA+CGG - chr8.3:55506166-55506185 MS.gene59756:CDS 40.0%
! TGCTTATGCTGCTTGGAAAT+TGG - chr8.3:55506943-55506962 MS.gene59756:CDS 40.0%
!! CATGGAAGTGTTCAGAACAA+AGG - chr8.3:55507345-55507364 MS.gene59756:CDS 40.0%
!!! GTTGCTCCCCAAATGTTTTT+TGG - chr8.3:55507656-55507675 MS.gene59756:CDS 40.0%
AACAAACACGAGGAGAAGAG+CGG - chr8.3:55506457-55506476 MS.gene59756:CDS 45.0%
AGAACAAAGGGTAGAGGTTG+GGG - chr8.3:55507358-55507377 MS.gene59756:CDS 45.0%
ATGAATGTGGCCCTATGTGT+CGG - chr8.3:55507272-55507291 MS.gene59756:CDS 45.0%
ATGCCAACTTGAAGAGTCGA+AGG - chr8.3:55506361-55506380 MS.gene59756:CDS 45.0%
ATTCTTGCTGACCTCTCCAA+TGG - chr8.3:55507007-55507026 MS.gene59756:CDS 45.0%
CAGAACAAAGGGTAGAGGTT+GGG - chr8.3:55507357-55507376 MS.gene59756:CDS 45.0%
CTGCCAAAGTGACTCCAATA+AGG - chr8.3:55506063-55506082 MS.gene59756:CDS 45.0%
GAACTCTTGTAGGCCCTTAT+TGG + chr8.3:55506080-55506099 None:intergenic 45.0%
GAAGAAGAACAAAACTCGCG+AGG - chr8.3:55506223-55506242 MS.gene59756:CDS 45.0%
GCACTAGACCAAAAGGTTTC+GGG + chr8.3:55507120-55507139 None:intergenic 45.0%
GGGCCACATTCATGAATAAG+CGG + chr8.3:55507265-55507284 None:intergenic 45.0%
GGGTTTGCATGCTCAATCAA+TGG - chr8.3:55506541-55506560 MS.gene59756:CDS 45.0%
GGTGGTACGAGTTCTTATGT+TGG - chr8.3:55506254-55506273 MS.gene59756:CDS 45.0%
GTAGGAAAACACCGACACAT+AGG + chr8.3:55507286-55507305 None:intergenic 45.0%
GTGTTCAGAACAAAGGGTAG+AGG - chr8.3:55507352-55507371 MS.gene59756:CDS 45.0%
GTTCCTTCGACTCTTCAAGT+TGG + chr8.3:55506367-55506386 None:intergenic 45.0%
TACTTTCAACCCCATTGGAG+AGG + chr8.3:55507021-55507040 None:intergenic 45.0%
TCAGAACAAAGGGTAGAGGT+TGG - chr8.3:55507356-55507375 MS.gene59756:CDS 45.0%
TGGATCTAAGGAGGATACTG+TGG - chr8.3:55506592-55506611 MS.gene59756:CDS 45.0%
TGGGTATCCACCAGAAAACA+CGG + chr8.3:55505898-55505917 None:intergenic 45.0%
TTCTTGCTGACCTCTCCAAT+GGG - chr8.3:55507008-55507027 MS.gene59756:CDS 45.0%
TTGCATGCTCAATCAATGGG+TGG - chr8.3:55506545-55506564 MS.gene59756:CDS 45.0%
! CTTTGGACAGAAGTGCACAT+CGG - chr8.3:55506753-55506772 MS.gene59756:CDS 45.0%
! GTTCAATCCGTGTTTTCTGG+TGG - chr8.3:55505888-55505907 MS.gene59756:CDS 45.0%
! TCTTCAGGTTCTGTTGGAAG+AGG + chr8.3:55505966-55505985 None:intergenic 45.0%
! TTGGCAGCCAGTCTTATATG+CGG - chr8.3:55507675-55507694 MS.gene59756:CDS 45.0%
! TTTCTGGTGGATACCCATCT+GGG - chr8.3:55505901-55505920 MS.gene59756:CDS 45.0%
!! TTTTCTGGTGGATACCCATC+TGG - chr8.3:55505900-55505919 MS.gene59756:CDS 45.0%
ACAAACACGAGGAGAAGAGC+GGG - chr8.3:55506458-55506477 MS.gene59756:CDS 50.0%
ACACTGGATCCTATACGTGC+TGG - chr8.3:55507388-55507407 MS.gene59756:CDS 50.0%
ACATCCCCAATCTCAATCCC+AGG + chr8.3:55506491-55506510 None:intergenic 50.0%
ATTACCCATGCTGGTCATGC+TGG - chr8.3:55507781-55507800 MS.gene59756:CDS 50.0%
CAAAGTAGCCGAGAAAACGC+CGG - chr8.3:55506001-55506020 MS.gene59756:CDS 50.0%
GAACAAAGGGTAGAGGTTGG+GGG - chr8.3:55507359-55507378 MS.gene59756:CDS 50.0%
GAAGGCTGCACTAGACCAAA+AGG + chr8.3:55507127-55507146 None:intergenic 50.0%
GAGGTAGCAGTGCCTTTAGA+AGG - chr8.3:55507803-55507822 MS.gene59756:CDS 50.0%
GCAGGTTCCTGTACAAGGAA+TGG - chr8.3:55506980-55506999 MS.gene59756:CDS 50.0%
GCATCAAGAGGGGTTTCTTC+AGG + chr8.3:55505981-55506000 None:intergenic 50.0%
GGCCCTTATTGGAGTCACTT+TGG + chr8.3:55506069-55506088 None:intergenic 50.0%
TCTTGCTGACCTCTCCAATG+GGG - chr8.3:55507009-55507028 MS.gene59756:CDS 50.0%
TGGTGCCTGGGATTGAGATT+GGG - chr8.3:55506483-55506502 MS.gene59756:CDS 50.0%
TGTAACACAGCATGTGTCCC+AGG - chr8.3:55507160-55507179 MS.gene59756:CDS 50.0%
TTGGCTCAAAAGTGGAAGGC+AGG - chr8.3:55506962-55506981 MS.gene59756:CDS 50.0%
! CGGCTACTTTGGCATCAAGA+GGG + chr8.3:55505992-55506011 None:intergenic 50.0%
! GCGTTAAGCGTTGTTTCGTC+AGG - chr8.3:55506614-55506633 MS.gene59756:CDS 50.0%
! GGCTACTTTGGCATCAAGAG+GGG + chr8.3:55505991-55506010 None:intergenic 50.0%
! GGGGTTTCTTCAGGTTCTGT+TGG + chr8.3:55505972-55505991 None:intergenic 50.0%
! TCGGCTACTTTGGCATCAAG+AGG + chr8.3:55505993-55506012 None:intergenic 50.0%
! TGCTTTCACCGGCGTTTTCT+CGG + chr8.3:55506012-55506031 None:intergenic 50.0%
!! GCAAAGTGCCGTGGTTTCTT+TGG - chr8.3:55507850-55507869 MS.gene59756:CDS 50.0%
!! TGCACTTGCTATCAAGCGTG+CGG - chr8.3:55506394-55506413 MS.gene59756:CDS 50.0%
ACCTCCAGCATGACCAGCAT+GGG + chr8.3:55507788-55507807 None:intergenic 55.0%
GAAAGAGGGAAATCTGGCGG+TGG - chr8.3:55506878-55506897 MS.gene59756:CDS 55.0%
GGAAGGCAGGTTCCTGTACA+AGG - chr8.3:55506975-55506994 MS.gene59756:CDS 55.0%
GGTGCCTGGGATTGAGATTG+GGG - chr8.3:55506484-55506503 MS.gene59756:CDS 55.0%
GTGGTGCCTGGGATTGAGAT+TGG - chr8.3:55506482-55506501 MS.gene59756:CDS 55.0%
TACCTCCAGCATGACCAGCA+TGG + chr8.3:55507789-55507808 None:intergenic 55.0%
! AAAACTCGCGAGGCGTCTGT+TGG - chr8.3:55506233-55506252 MS.gene59756:CDS 55.0%
! CGGCGTTTTCTCGGCTACTT+TGG + chr8.3:55506003-55506022 None:intergenic 55.0%
! GGAGTCACTTTGGCAGCAAC+AGG + chr8.3:55506059-55506078 None:intergenic 55.0%
!! GTTGCTGCTGCTGCTTTCAC+CGG + chr8.3:55506023-55506042 None:intergenic 55.0%
ACCCATGCTGGTCATGCTGG+AGG - chr8.3:55507784-55507803 MS.gene59756:CDS 60.0%
AGGTTGGGGGCTTCGAACAC+TGG - chr8.3:55507372-55507391 MS.gene59756:CDS 60.0%
!! TGTGGGTCAGCAAAGTGCCG+TGG - chr8.3:55507841-55507860 MS.gene59756:CDS 60.0%
! ACTCGCGAGGCGTCTGTTGG+TGG - chr8.3:55506236-55506255 MS.gene59756:CDS 65.0%
AGAAGAGCGGGCGTGGTGCC+TGG - chr8.3:55506470-55506489 MS.gene59756:CDS 70.0%
CACGAGGAGAAGAGCGGGCG+TGG - chr8.3:55506463-55506482 MS.gene59756:CDS 70.0%
GAAGAGCGGGCGTGGTGCCT+GGG - chr8.3:55506471-55506490 MS.gene59756:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 55505783 55507876 55505783 ID=MS.gene59756
chr8.3 mRNA 55505783 55507876 55505783 ID=MS.gene59756.t1;Parent=MS.gene59756
chr8.3 exon 55505783 55507876 55505783 ID=MS.gene59756.t1.exon1;Parent=MS.gene59756.t1
chr8.3 CDS 55505783 55507876 55505783 ID=cds.MS.gene59756.t1;Parent=MS.gene59756.t1
Gene Sequence

>MS.gene59756

ATGGAAGAACAACACAACAACAACACTGCTTCAGATTCATTTGACAAATCTAAGATTGTTGAAGTCAAACCCTTACGTAGTTTAGCACCTGTTTTACCAAAACATGTTCAATCCGTGTTTTCTGGTGGATACCCATCTGGGTTTCCTCCATTTTACTCATTTGTCAAACCCCATCAAATTCCTCTTCCAACAGAACCTGAAGAAACCCCTCTTGATGCCAAAGTAGCCGAGAAAACGCCGGTGAAAGCAGCAGCAGCAACAGCTCATGACACTCCTGTTGCTGCCAAAGTGACTCCAATAAGGGCCTACAAGAGTTCACATGATGAAGAAATGAATCAACAAGGCGATGGAGATAACGATGATTATTCGGAAGGGTTTGTAGGTGATAAACGAAAGCGTAGCACGGATAATATTGAGAACTGCAAGGAGTTTCTTAGAAGGAAGAAGAACAAAACTCGCGAGGCGTCTGTTGGTGGTACGAGTTCTTATGTTGGTGTTAACCCGACACTAAAAGATGATGGTGATAGGGAGTCAGTTAATCATGTGCTTATGACGTTTGATTCAATTCGAAGGAGGCTATGCCAACTTGAAGAGTCGAAGGAACTAAACAATGCACTTGCTATCAAGCGTGCGGATCTAAGAGCGAGTAATGCTTTGACTTGTAAAGGGTTTAAAACAAACACGAGGAGAAGAGCGGGCGTGGTGCCTGGGATTGAGATTGGGGATGTTTTCTTTTTTCGAATGGAAATGTGTCTTGTGGGTTTGCATGCTCAATCAATGGGTGGAATTGATTATATGAGTATCAAGGATGGATCTAAGGAGGATACTGTGGCGTTAAGCGTTGTTTCGTCAGGTGTATATGGTGATGATACAGAGGATAATAATGTTTTAATTTATAGTGGTCAGGGTGAGAATTTCAACAAGAAAGATAAACATGTGACTGATCAGAAGCTTCAAAGAGGTAATCTTGCTTTGGACAGAAGTGCACATCGGCACGATGAAGTTAGAGTCATTCGAGGCGTGAGAGATCCTGTGAATAGAAGTTCAAAAATCTATATGTATGATGGTTTATATAAAATCCAAGATTCTTGGATTGAAAGAGGGAAATCTGGCGGTGGTATATTTAAGTATAAGTTGGTAAGGTTACCTGGTCAAAAAATTGCTTATGCTGCTTGGAAATTGGCTCAAAAGTGGAAGGCAGGTTCCTGTACAAGGAATGGTTTTATTCTTGCTGACCTCTCCAATGGGGTTGAAAGTATTCCAGTATCACTTGTCAATGATGTCGATGATGAGAAGGGTCCTGCTTTTTTCACTTATTTCACGTCTCTCAAAAACCCGAAACCTTTTGGTCTAGTGCAGCCTTCTTTAAGCTGCAATTGTAACACAGCATGTGTCCCAGGTGATTTGAACTGTTCATGCATTCAAAGAAATGAGGGTGATTTTCCGTATACTGCAAATAGTATTCTAGTGAGTCGGAAGCCGCTTATTCATGAATGTGGCCCTATGTGTCGGTGTTTTCCTACCTGCAAAAATCGAGTATCACAGACTGGTTTAAAACAACACATGGAAGTGTTCAGAACAAAGGGTAGAGGTTGGGGGCTTCGAACACTGGATCCTATACGTGCTGGTACTTTTATTTGTGAGTATGCAGGAGAAGTTATTAACAGAGCCAAGGTATATCAGAATGTTGAAGGAGATAATGACGAATATGTTTTTGATACAAGCCGTATTTATGAACCATTCAAGTGGAATTATGAACCTAGCTTACTGGAAGATGTAAGTTCAAATGTATGTAGTGAGGATTATACTATACCATCTCCTCTAATTATAAGTGCCAAGAATGTGGGAAATATAGCTAGATTCATGAATCATAGTTGCTCCCCAAATGTTTTTTGGCAGCCAGTCTTATATGCGGAAAATAATCAATCCTTTATCCACATTGCATTTTTTGCCCTTAGACATATTCCTCCAATGGCAGAGTTAACATATGATTATGGAATTACCCATGCTGGTCATGCTGGAGGTAGCAGTGCCTTTAGAAGGAGAAAGAAATGCTTGTGTGGGTCAGCAAAGTGCCGTGGTTTCTTTGGTTAA
Protein sequence

>MS.gene59756.t1

MEEQHNNNTASDSFDKSKIVEVKPLRSLAPVLPKHVQSVFSGGYPSGFPPFYSFVKPHQIPLPTEPEETPLDAKVAEKTPVKAAAATAHDTPVAAKVTPIRAYKSSHDEEMNQQGDGDNDDYSEGFVGDKRKRSTDNIENCKEFLRRKKNKTREASVGGTSSYVGVNPTLKDDGDRESVNHVLMTFDSIRRRLCQLEESKELNNALAIKRADLRASNALTCKGFKTNTRRRAGVVPGIEIGDVFFFRMEMCLVGLHAQSMGGIDYMSIKDGSKEDTVALSVVSSGVYGDDTEDNNVLIYSGQGENFNKKDKHVTDQKLQRGNLALDRSAHRHDEVRVIRGVRDPVNRSSKIYMYDGLYKIQDSWIERGKSGGGIFKYKLVRLPGQKIAYAAWKLAQKWKAGSCTRNGFILADLSNGVESIPVSLVNDVDDEKGPAFFTYFTSLKNPKPFGLVQPSLSCNCNTACVPGDLNCSCIQRNEGDFPYTANSILVSRKPLIHECGPMCRCFPTCKNRVSQTGLKQHMEVFRTKGRGWGLRTLDPIRAGTFICEYAGEVINRAKVYQNVEGDNDEYVFDTSRIYEPFKWNYEPSLLEDVSSNVCSEDYTIPSPLIISAKNVGNIARFMNHSCSPNVFWQPVLYAENNQSFIHIAFFALRHIPPMAELTYDYGITHAGHAGGSSAFRRRKKCLCGSAKCRGFFG