AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene78671

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene78671.t1 MTR_8g042750 97.238 688 17 1 12 699 3 688 0.0 1399
MS.gene78671.t1 MTR_3g011440 59.797 689 234 8 13 698 15 663 0.0 845
MS.gene78671.t1 MTR_7g088370 45.828 731 330 14 5 698 3 704 0.0 615
MS.gene78671.t1 MTR_5g013420 40.068 584 318 13 132 698 520 1088 8.24e-128 405
MS.gene78671.t1 MTR_5g013420 40.034 582 317 13 132 696 520 1086 1.77e-126 402
MS.gene78671.t1 MTR_4g010830 38.908 568 324 13 133 696 429 977 2.80e-115 370
MS.gene78671.t1 MTR_8g070070 41.556 450 245 12 231 670 317 758 1.16e-105 339
MS.gene78671.t1 MTR_1g035420 39.960 503 279 14 178 670 158 647 1.10e-104 333
MS.gene78671.t1 MTR_8g070075 40.089 449 251 10 231 669 310 750 7.72e-104 334
MS.gene78671.t1 MTR_8g071030 39.741 463 251 9 223 670 289 738 1.02e-102 331
MS.gene78671.t1 MTR_4g010550 38.990 495 252 14 205 696 14 461 4.96e-102 320
MS.gene78671.t1 MTR_1g035400 36.822 516 286 16 178 670 68 566 7.16e-92 297
MS.gene78671.t1 MTR_6g044690 36.571 525 280 17 178 669 60 564 5.28e-90 292
MS.gene78671.t1 MTR_0376s0030 36.207 522 290 16 175 668 55 561 1.98e-86 283
MS.gene78671.t1 MTR_6g061270 34.902 510 293 13 211 695 195 690 7.99e-85 282
MS.gene78671.t1 MTR_7g084090 34.442 511 295 13 211 695 257 753 1.26e-84 283
MS.gene78671.t1 MTR_6g061200 34.000 500 282 12 211 695 195 661 7.33e-81 270
MS.gene78671.t1 MTR_6g043960 33.678 484 274 16 197 669 35 482 3.72e-71 239
MS.gene78671.t1 MTR_1g048950 33.952 539 294 12 178 696 34 530 4.56e-70 239
MS.gene78671.t1 MTR_7g084090 35.433 381 221 10 211 575 257 628 6.57e-64 224
MS.gene78671.t1 MTR_2g054460 32.308 520 260 18 178 669 9 464 8.04e-63 217
MS.gene78671.t1 MTR_7g445710 30.978 552 274 22 167 694 70 538 4.14e-61 214
MS.gene78671.t1 MTR_7g445530 31.238 525 255 21 167 667 70 512 4.81e-58 205
MS.gene78671.t1 MTR_7g450730 29.511 532 273 17 167 694 67 500 3.92e-53 191
MS.gene78671.t1 MTR_7g052480 33.788 293 181 6 410 695 266 552 4.84e-43 164
MS.gene78671.t1 MTR_1g080340 28.443 334 171 8 412 695 267 582 1.76e-33 136
MS.gene78671.t1 MTR_5g018850 31.532 333 161 12 403 696 1200 1504 1.09e-30 130
MS.gene78671.t1 MTR_7g098390 29.032 341 173 10 406 697 380 700 8.09e-30 126
MS.gene78671.t1 MTR_8g078490 28.571 329 177 8 401 696 947 1250 2.49e-29 125
MS.gene78671.t1 MTR_1g069570 27.976 336 173 9 412 697 428 744 3.47e-28 121
MS.gene78671.t1 MTR_8g078505 30.368 326 172 11 397 694 235 533 4.21e-28 119
MS.gene78671.t1 MTR_4g132610 34.419 215 118 5 483 696 852 1044 5.98e-28 120
MS.gene78671.t1 MTR_7g445600 33.987 153 61 2 515 667 243 355 3.66e-23 102
MS.gene78671.t1 MTR_7g445600 32.386 176 96 8 167 340 66 220 1.11e-11 67.4
MS.gene78671.t1 MTR_1g098000 31.401 207 92 6 500 699 72 235 7.89e-21 96.7
MS.gene78671.t1 MTR_1g098370 31.401 207 92 6 500 699 75 238 1.06e-20 96.7
MS.gene78671.t1 MTR_1g069570 26.515 264 130 7 412 626 428 676 2.77e-17 86.7
MS.gene78671.t1 MTR_0071s0100 26.347 334 166 13 381 699 81 349 1.03e-16 83.2
MS.gene78671.t1 MTR_6g059310 27.586 203 109 5 497 699 87 251 1.83e-14 75.9
MS.gene78671.t1 MTR_6g059310 27.586 203 109 5 497 699 87 251 2.11e-14 75.5
MS.gene78671.t1 MTR_7g445810 30.653 199 109 9 174 366 91 266 2.54e-11 65.5
MS.gene78671.t1 MTR_1g064770 42.857 63 35 1 495 556 28 90 2.63e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene78671.t1 AT5G04940 47.218 701 314 9 15 699 10 670 0.0 654
MS.gene78671.t1 AT5G04940 47.218 701 314 9 15 699 10 670 0.0 654
MS.gene78671.t1 AT1G73100 47.902 691 318 8 14 699 16 669 0.0 649
MS.gene78671.t1 AT1G17770 40.446 717 370 21 14 698 1 692 9.70e-155 464
MS.gene78671.t1 AT2G24740 46.211 541 235 13 173 699 257 755 3.70e-147 447
MS.gene78671.t1 AT2G35160 39.405 538 272 16 170 696 261 755 7.79e-109 347
MS.gene78671.t1 AT2G35160 39.405 538 272 16 170 696 297 791 2.10e-108 347
MS.gene78671.t1 AT2G35160 39.405 538 272 16 170 696 297 791 2.10e-108 347
MS.gene78671.t1 AT2G35160 39.405 538 272 16 170 696 297 791 2.10e-108 347
MS.gene78671.t1 AT2G35160 39.405 538 272 16 170 696 297 791 2.10e-108 347
MS.gene78671.t1 AT2G22740 38.491 530 301 12 178 695 270 786 3.92e-107 343
MS.gene78671.t1 AT2G22740 38.491 530 301 12 178 695 270 786 3.92e-107 343
MS.gene78671.t1 AT4G13460 37.945 506 290 12 178 670 145 639 1.12e-106 338
MS.gene78671.t1 AT4G13460 37.945 506 290 12 178 670 145 639 1.12e-106 338
MS.gene78671.t1 AT2G33290 37.251 502 294 11 178 669 149 639 8.42e-101 323
MS.gene78671.t1 AT2G33290 37.251 502 294 11 178 669 149 639 8.42e-101 323
MS.gene78671.t1 AT2G33290 37.251 502 294 11 178 669 149 639 8.42e-101 323
MS.gene78671.t1 AT2G33290 37.251 502 294 11 178 669 149 639 8.42e-101 323
MS.gene78671.t1 AT5G13960 35.185 486 284 12 231 695 11 486 2.50e-85 277
MS.gene78671.t1 AT5G13960 34.646 508 299 13 210 695 124 620 4.29e-85 281
MS.gene78671.t1 AT5G47150 41.509 212 117 4 178 387 118 324 6.12e-44 161
MS.gene78671.t1 AT2G05900 42.857 196 108 3 252 445 1 194 6.29e-42 155
MS.gene78671.t1 AT2G05900 51.163 86 33 1 614 699 236 312 1.33e-21 96.7
MS.gene78671.t1 AT3G04380 28.060 335 170 8 412 695 117 431 1.50e-37 146
MS.gene78671.t1 AT3G04380 28.060 335 170 8 412 695 128 442 1.51e-37 147
MS.gene78671.t1 AT3G04380 28.060 335 170 8 412 695 117 431 1.59e-37 146
MS.gene78671.t1 AT3G04380 28.060 335 170 8 412 695 144 458 1.66e-37 147
MS.gene78671.t1 AT3G04380 28.060 335 170 8 412 695 101 415 1.77e-37 145
MS.gene78671.t1 AT3G04380 28.060 335 170 8 412 695 144 458 2.21e-37 146
MS.gene78671.t1 AT5G47160 41.410 227 122 6 161 383 188 407 6.18e-35 138
MS.gene78671.t1 AT5G47160 41.410 227 122 6 161 383 188 407 6.18e-35 138
MS.gene78671.t1 AT5G47160 41.410 227 122 6 161 383 188 407 6.18e-35 138
MS.gene78671.t1 AT1G04050 28.382 377 183 11 371 695 274 615 6.75e-31 129
MS.gene78671.t1 AT1G04050 28.912 377 181 12 371 695 378 719 9.82e-31 129
MS.gene78671.t1 AT1G04050 28.912 377 181 12 371 695 378 719 9.82e-31 129
MS.gene78671.t1 AT2G23740 30.818 318 168 12 409 698 1081 1374 6.12e-30 127
MS.gene78671.t1 AT2G23740 30.818 318 168 12 409 698 1088 1381 7.98e-30 127
MS.gene78671.t1 AT2G23740 30.818 318 168 12 409 698 1088 1381 7.98e-30 127
MS.gene78671.t1 AT2G23740 30.818 318 168 12 409 698 1088 1381 7.98e-30 127
MS.gene78671.t1 AT5G43990 26.575 365 182 11 381 695 354 682 1.29e-28 122
MS.gene78671.t1 AT5G43990 26.575 365 182 11 381 695 354 682 1.29e-28 122
MS.gene78671.t1 AT5G43990 26.575 365 182 11 381 695 354 682 1.29e-28 122
MS.gene78671.t1 AT5G43990 26.575 365 182 11 381 695 354 682 1.29e-28 122
MS.gene78671.t1 AT5G43990 26.575 365 182 11 381 695 377 705 1.50e-28 122
MS.gene78671.t1 AT5G43990 26.575 365 182 11 381 695 377 705 1.50e-28 122
MS.gene78671.t1 AT5G43990 26.575 365 182 11 381 695 374 702 1.56e-28 122
MS.gene78671.t1 AT5G43990 26.575 365 182 11 381 695 374 702 1.56e-28 122
MS.gene78671.t1 AT5G43990 26.575 365 182 11 381 695 374 702 1.56e-28 122
MS.gene78671.t1 AT5G43990 26.575 365 182 11 381 695 374 702 1.56e-28 122
MS.gene78671.t1 AT5G43990 26.575 365 182 11 381 695 285 613 1.58e-28 121
MS.gene78671.t1 AT5G43990 26.575 365 182 11 381 695 397 725 1.95e-28 122
MS.gene78671.t1 AT5G43990 26.575 365 182 11 381 695 397 725 1.95e-28 122
MS.gene78671.t1 AT5G43990 26.575 365 182 11 381 695 305 633 2.83e-28 121
MS.gene78671.t1 AT5G43990 26.575 365 182 11 381 695 305 633 2.83e-28 121
MS.gene78671.t1 AT5G43990 26.575 365 182 11 381 695 305 633 2.83e-28 121
MS.gene78671.t1 AT5G43990 26.575 365 182 11 381 695 305 633 2.83e-28 121
MS.gene78671.t1 AT2G23740 31.301 246 122 11 409 626 1088 1314 1.78e-20 97.4
MS.gene78671.t1 AT2G23740 31.301 246 122 11 409 626 1088 1314 1.78e-20 97.4
MS.gene78671.t1 AT3G03750 29.956 227 132 8 473 696 145 347 1.84e-18 88.2
MS.gene78671.t1 AT4G30860 28.643 199 102 5 501 699 307 465 9.18e-15 78.2
MS.gene78671.t1 AT3G03750 27.111 225 125 8 473 696 145 331 7.24e-13 70.9
MS.gene78671.t1 AT3G59960 28.889 180 86 6 522 699 111 250 2.04e-11 65.9
MS.gene78671.t1 AT3G59960 28.889 180 86 6 522 699 111 250 2.04e-11 65.9
MS.gene78671.t1 AT3G59960 28.889 180 86 6 522 699 111 250 2.04e-11 65.9
MS.gene78671.t1 AT3G59960 28.889 180 86 6 522 699 111 250 6.11e-11 65.1

Find 159 sgRNAs with CRISPR-Local

Find 189 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAACTCTTGTAAGCCCTTAT+TGG 0.202200 8.4:+56805691 None:intergenic
TGCTTATGCTGCTTGGAAAT+TGG 0.240702 8.4:-56804825 MS.gene78671:CDS
CTCTTTCAATCCAAGAATCT+TGG 0.247325 8.4:+56804906 None:intergenic
GCACTAGACCAAAAGGTTTC+GGG 0.260116 8.4:+56804651 None:intergenic
AGCTATATTTCCCACATTCT+TGG 0.262990 8.4:+56804151 None:intergenic
AACACGGATTGAACATGTTT+TGG 0.288137 8.4:+56805895 None:intergenic
GCATCAAGAGGGGTTTCTTC+AGG 0.301685 8.4:+56805796 None:intergenic
TGCACTAGACCAAAAGGTTT+CGG 0.303413 8.4:+56804650 None:intergenic
TGGTGCCTGGGATTGAGATT+GGG 0.314399 8.4:-56805285 MS.gene78671:CDS
GTGGTGCCTGGGATTGAGAT+TGG 0.321695 8.4:-56805286 MS.gene78671:CDS
TTCTTGGCACTTATAATTAG+AGG 0.323045 8.4:+56804167 None:intergenic
CCATTGGAGGAATATGTCTA+AGG 0.339713 8.4:+56804033 None:intergenic
TATATAAAATCCAAGATTCT+TGG 0.344747 8.4:-56804916 MS.gene78671:CDS
GCAGAGTTAACATATGATTA+TGG 0.349411 8.4:-56804011 MS.gene78671:CDS
AGAAGAGCGGGCGTGGTGCC+TGG 0.355977 8.4:-56805298 MS.gene78671:CDS
GCAAAGTGCCGTGGTTTCTT+TGG 0.357611 8.4:-56803918 MS.gene78671:CDS
CTGCCAAAGTGACTCCAATA+AGG 0.365251 8.4:-56805705 MS.gene78671:CDS
GAATTATGAACCTAGCTTAC+TGG 0.368503 8.4:-56804237 MS.gene78671:CDS
CAGAACAAAGGGTAGAGGTT+GGG 0.385564 8.4:-56804411 MS.gene78671:CDS
TTCTTGCTGACCTCTCCAAT+GGG 0.387936 8.4:-56804760 MS.gene78671:CDS
GATTATTCGGAAGGGTTTGT+AGG 0.392820 8.4:-56805625 MS.gene78671:CDS
ACTTGAATGGTTCATAAATA+CGG 0.393021 8.4:+56804261 None:intergenic
TCAAAGAGGTAATCTTGCTT+TGG 0.393398 8.4:-56805032 MS.gene78671:CDS
GAGTATCAAGGATGGATCTA+AGG 0.393584 8.4:-56805188 MS.gene78671:CDS
GGAGTCACTTTGGCAGCAAC+AGG 0.394355 8.4:+56805712 None:intergenic
AGAATACTATTTGCAGTATA+CGG 0.394436 8.4:+56804542 None:intergenic
GGTTCATAATTCCACTTGAA+TGG 0.395912 8.4:+56804248 None:intergenic
ACATCATTGACAAGTGATAC+TGG 0.398710 8.4:+56804725 None:intergenic
TGGATTGAAAGAGGGAAATC+TGG 0.399448 8.4:-56804896 MS.gene78671:CDS
AGTAATGCTTTGACTTGTAA+AGG 0.409168 8.4:-56805340 MS.gene78671:CDS
GTTGTTTCGTCAGGTGTATA+TGG 0.410656 8.4:-56805145 MS.gene78671:CDS
CTGTTGGAAGAGGAATTTGA+TGG 0.415526 8.4:+56805821 None:intergenic
GCGTTAAGCGTTGTTTCGTC+AGG 0.419354 8.4:-56805154 MS.gene78671:CDS
TGGAGATAACGATGATTATT+CGG 0.420044 8.4:-56805638 MS.gene78671:CDS
AGAACAAAGGGTAGAGGTTG+GGG 0.428660 8.4:-56804410 MS.gene78671:CDS
ATTCTTGCTGACCTCTCCAA+TGG 0.429575 8.4:-56804761 MS.gene78671:CDS
CACTAAAAGATGATGGTGAT+AGG 0.431343 8.4:-56805480 MS.gene78671:CDS
GTAATGCTTTGACTTGTAAA+GGG 0.433132 8.4:-56805339 MS.gene78671:CDS
ACTGCAAGGAGTTTCTTAGA+AGG 0.433269 8.4:-56805567 MS.gene78671:CDS
CACGAGGAGAAGAGCGGGCG+TGG 0.458603 8.4:-56805305 MS.gene78671:CDS
CGAATGGAAATGTGTCTTGT+GGG 0.460019 8.4:-56805247 MS.gene78671:CDS
CAAGATTCTTGGATTGAAAG+AGG 0.462943 8.4:-56804905 MS.gene78671:CDS
GCATTTCTTTCTCCTTCTAA+AGG 0.463277 8.4:+56803953 None:intergenic
GGGTTTGCATGCTCAATCAA+TGG 0.467421 8.4:-56805227 MS.gene78671:CDS
TGCCAAAGTGACTCCAATAA+GGG 0.473252 8.4:-56805704 MS.gene78671:CDS
GGTTTGACAAATGAGTAAAA+TGG 0.474364 8.4:+56805844 None:intergenic
ATTACCCATGCTGGTCATGC+TGG 0.474621 8.4:-56803987 MS.gene78671:CDS
TTTCTGGTGGATACCCATCT+GGG 0.476462 8.4:-56805873 MS.gene78671:CDS
AACAGGTGCTAAACTACGTA+AGG 0.476974 8.4:+56805921 None:intergenic
CTTACATCTTCCAGTAAGCT+AGG 0.477855 8.4:+56804227 None:intergenic
TTACAATTGCAGCTTAAAGA+AGG 0.477858 8.4:+56804626 None:intergenic
ATAAAAGTACCAGCACGTAT+AGG 0.483482 8.4:+56804371 None:intergenic
GAAGAGCGGGCGTGGTGCCT+GGG 0.483938 8.4:-56805297 MS.gene78671:CDS
TATTTAAGTATAAGTTGGTA+AGG 0.490370 8.4:-56804865 MS.gene78671:CDS
GGGGTTTCTTCAGGTTCTGT+TGG 0.497837 8.4:+56805805 None:intergenic
CATGAACAGTTCAAATCACC+TGG 0.499372 8.4:+56804590 None:intergenic
GAGGTAGCAGTGCCTTTAGA+AGG 0.502063 8.4:-56803965 MS.gene78671:CDS
ACCTCCAGCATGACCAGCAT+GGG 0.504841 8.4:+56803983 None:intergenic
TTCATGCATTCAAAGAAATG+AGG 0.505419 8.4:-56804573 MS.gene78671:CDS
GCACTTATAATTAGAGGAGA+TGG 0.508609 8.4:+56804173 None:intergenic
GAAGGCTGCACTAGACCAAA+AGG 0.511466 8.4:+56804644 None:intergenic
TGGTATATTTAAGTATAAGT+TGG 0.512381 8.4:-56804870 MS.gene78671:CDS
TTCAACATTCTGATATACCT+TGG 0.513102 8.4:+56804316 None:intergenic
CGGCTACTTTGGCATCAAGA+GGG 0.513820 8.4:+56805785 None:intergenic
TCTTCAGGTTCTGTTGGAAG+AGG 0.514865 8.4:+56805811 None:intergenic
CTTGGAAATTGGCTCAAAAG+TGG 0.515222 8.4:-56804814 MS.gene78671:CDS
AAGGTATATCAGAATGTTGA+AGG 0.517616 8.4:-56804314 MS.gene78671:CDS
TGGAATACTTTCAACCCCAT+TGG 0.517944 8.4:+56804745 None:intergenic
TCATATGTTAACTCTGCCAT+TGG 0.520039 8.4:+56804017 None:intergenic
ATGGAAGTGTTCAGAACAAA+GGG 0.520947 8.4:-56804422 MS.gene78671:CDS
TATGTTAACTCTGCCATTGG+AGG 0.521537 8.4:+56804020 None:intergenic
AATAAAACCATTCCTTGTAC+AGG 0.521861 8.4:+56804781 None:intergenic
TATAAGTTGGTAAGGTTACC+TGG 0.522467 8.4:-56804857 MS.gene78671:CDS
ACTCGCGAGGCGTCTGTTGG+TGG 0.525728 8.4:-56805532 MS.gene78671:CDS
GGAAGGCAGGTTCCTGTACA+AGG 0.528660 8.4:-56804793 MS.gene78671:CDS
GATAACGATGATTATTCGGA+AGG 0.530602 8.4:-56805634 MS.gene78671:CDS
AGCCCTTATTGGAGTCACTT+TGG 0.532284 8.4:+56805702 None:intergenic
TGTAACACAGCATGTGTCCC+AGG 0.534817 8.4:-56804608 MS.gene78671:CDS
TCGGCTACTTTGGCATCAAG+AGG 0.534991 8.4:+56805784 None:intergenic
AACAAACACGAGGAGAAGAG+CGG 0.537646 8.4:-56805311 MS.gene78671:CDS
GCAGGTTCCTGTACAAGGAA+TGG 0.539532 8.4:-56804788 MS.gene78671:CDS
AATTATAAGTGCCAAGAATG+TGG 0.540601 8.4:-56804162 MS.gene78671:CDS
TCGAATGGAAATGTGTCTTG+TGG 0.542415 8.4:-56805248 MS.gene78671:CDS
TGTTGGAAGAGGAATTTGAT+GGG 0.543447 8.4:+56805822 None:intergenic
TTGGCTCAAAAGTGGAAGGC+AGG 0.546449 8.4:-56804806 MS.gene78671:CDS
CCTTAGACATATTCCTCCAA+TGG 0.547540 8.4:-56804033 MS.gene78671:CDS
GGTTTGCATGCTCAATCAAT+GGG 0.548358 8.4:-56805226 MS.gene78671:CDS
ACTAAAAGATGATGGTGATA+GGG 0.551648 8.4:-56805479 MS.gene78671:CDS
CAAATAGTATTCTAGTGAGT+CGG 0.552747 8.4:-56804532 MS.gene78671:CDS
AAGATTCTTGGATTGAAAGA+GGG 0.554674 8.4:-56804904 MS.gene78671:CDS
TCAGAACAAAGGGTAGAGGT+TGG 0.558625 8.4:-56804412 MS.gene78671:CDS
GGTGCCTGGGATTGAGATTG+GGG 0.558794 8.4:-56805284 MS.gene78671:CDS
GATTATGGAATTACCCATGC+TGG 0.562248 8.4:-56803996 MS.gene78671:CDS
AACCCGACACTAAAAGATGA+TGG 0.564385 8.4:-56805487 MS.gene78671:CDS
GTAGGAAAACACCGACACAT+AGG 0.564832 8.4:+56804485 None:intergenic
GTTCCTTCGACTCTTCAAGT+TGG 0.565424 8.4:+56805404 None:intergenic
CGTTTGATTCGATTCGAAGG+AGG 0.569284 8.4:-56805432 MS.gene78671:CDS
TGACGTTTGATTCGATTCGA+AGG 0.570291 8.4:-56805435 MS.gene78671:CDS
ACATCCCCAATCTCAATCCC+AGG 0.570470 8.4:+56805280 None:intergenic
TACCTCCAGCATGACCAGCA+TGG 0.572482 8.4:+56803982 None:intergenic
TAGGAAAACACCGACACATA+GGG 0.573999 8.4:+56804486 None:intergenic
TAAAATGGAGGAAACCCAGA+TGG 0.574940 8.4:+56805859 None:intergenic
GATGAAGTTAGAGTCATTCG+AGG 0.576279 8.4:-56804989 MS.gene78671:CDS
GGCTACTTTGGCATCAAGAG+GGG 0.578550 8.4:+56805786 None:intergenic
ATTATAAGTGCCAAGAATGT+GGG 0.579471 8.4:-56804161 MS.gene78671:CDS
GAAATGAATCAACAAGGCGA+TGG 0.581588 8.4:-56805658 MS.gene78671:CDS
GTGTTCAGAACAAAGGGTAG+AGG 0.581999 8.4:-56804416 MS.gene78671:CDS
TACTTTCAACCCCATTGGAG+AGG 0.582710 8.4:+56804750 None:intergenic
AAGCCGCTTATTCATGAATG+TGG 0.582827 8.4:-56804509 MS.gene78671:CDS
TTGACAAATGAGTAAAATGG+AGG 0.583789 8.4:+56805847 None:intergenic
AAAACTCGCGAGGCGTCTGT+TGG 0.584341 8.4:-56805535 MS.gene78671:CDS
ACACTGGATCCTATACGTGC+TGG 0.589618 8.4:-56804380 MS.gene78671:CDS
GGTGGTACGAGTTCTTATGT+TGG 0.589976 8.4:-56805514 MS.gene78671:CDS
CATTGGAGGAATATGTCTAA+GGG 0.591612 8.4:+56804034 None:intergenic
AATTGATTATATGAGTATCA+AGG 0.594679 8.4:-56805200 MS.gene78671:CDS
CATGGAAGTGTTCAGAACAA+AGG 0.594814 8.4:-56804423 MS.gene78671:CDS
CAATGATGTCGATGATGAGA+AGG 0.596174 8.4:-56804711 MS.gene78671:CDS
ACAAACACGAGGAGAAGAGC+GGG 0.596233 8.4:-56805310 MS.gene78671:CDS
ATAACGATGATTATTCGGAA+GGG 0.598556 8.4:-56805633 MS.gene78671:CDS
GACTGGTTTAAAACAACACA+TGG 0.599479 8.4:-56804441 MS.gene78671:CDS
AGAAGTTATTAACAGAGCCA+AGG 0.601057 8.4:-56804333 MS.gene78671:CDS
TCATGCATTCAAAGAAATGA+GGG 0.603338 8.4:-56804572 MS.gene78671:CDS
GTATTTATGAACCATTCAAG+TGG 0.607961 8.4:-56804259 MS.gene78671:CDS
GAAATTGGCTCAAAAGTGGA+AGG 0.609566 8.4:-56804810 MS.gene78671:CDS
AGGAGAAAGAAATGCTTGTG+TGG 0.611149 8.4:-56803945 MS.gene78671:CDS
GAACAAAGGGTAGAGGTTGG+GGG 0.611366 8.4:-56804409 MS.gene78671:CDS
TGATAAACGAAAGCGTAGCA+CGG 0.612728 8.4:-56805602 MS.gene78671:CDS
GATTATATGAGTATCAAGGA+TGG 0.613333 8.4:-56805196 MS.gene78671:CDS
AGATGATGGTGATAGGGAGT+CGG 0.615277 8.4:-56805473 MS.gene78671:CDS
GGAGAAAGAAATGCTTGTGT+GGG 0.619249 8.4:-56803944 MS.gene78671:CDS
ATGCCAACTTGAAGAGTCGA+AGG 0.621780 8.4:-56805407 MS.gene78671:CDS
ACCCATGCTGGTCATGCTGG+AGG 0.621845 8.4:-56803984 MS.gene78671:CDS
GTTGGAAGAGGAATTTGATG+GGG 0.621967 8.4:+56805823 None:intergenic
TCTTGCTGACCTCTCCAATG+GGG 0.629627 8.4:-56804759 MS.gene78671:CDS
GAAAGAGGGAAATCTGGCGG+TGG 0.632493 8.4:-56804890 MS.gene78671:CDS
AAGTTCAAATGTATGTAGTG+AGG 0.636973 8.4:-56804207 MS.gene78671:CDS
TGGGTATCCACCAGAAAACA+CGG 0.640101 8.4:+56805879 None:intergenic
AAAATGGAGGAAACCCAGAT+GGG 0.640580 8.4:+56805860 None:intergenic
GGGCCACATTCATGAATAAG+CGG 0.645886 8.4:+56804506 None:intergenic
TTGGCAGCCAGTCTTATATG+CGG 0.646377 8.4:-56804093 MS.gene78671:CDS
TATCAAGGATGGATCTAAGG+AGG 0.648003 8.4:-56805185 MS.gene78671:CDS
TGCACTTGCTATCAAGCGTG+CGG 0.648738 8.4:-56805374 MS.gene78671:CDS
ACTGATCAGAAGCTTCAAAG+AGG 0.649359 8.4:-56805046 MS.gene78671:CDS
TTGCATGCTCAATCAATGGG+TGG 0.651570 8.4:-56805223 MS.gene78671:CDS
ACAGGTGCTAAACTACGTAA+GGG 0.655052 8.4:+56805922 None:intergenic
TGTATATGGTGATGATACAG+AGG 0.665371 8.4:-56805131 MS.gene78671:CDS
GAAGAAGAACAAAACTCGCG+AGG 0.668453 8.4:-56805545 MS.gene78671:CDS
TGTGGGTCAGCAAAGTGCCG+TGG 0.671789 8.4:-56803927 MS.gene78671:CDS
ATGAATGTGGCCCTATGTGT+CGG 0.674340 8.4:-56804496 MS.gene78671:CDS
CAAAGTAGCCGAGAAAACGC+CGG 0.676869 8.4:-56805773 MS.gene78671:CDS
TGGATCTAAGGAGGATACTG+TGG 0.679943 8.4:-56805176 MS.gene78671:CDS
AATGATGTCGATGATGAGAA+GGG 0.683211 8.4:-56804710 MS.gene78671:CDS
GGATAATATTGAGAACTGCA+AGG 0.691492 8.4:-56805581 MS.gene78671:CDS
ATTGTTAACCAAAGAAACCA+CGG 0.691606 8.4:+56803910 None:intergenic
GATGAAGAAATGAATCAACA+AGG 0.703890 8.4:-56805664 MS.gene78671:CDS
ATTGAAAGAGGGAAATCTGG+CGG 0.710427 8.4:-56804893 MS.gene78671:CDS
ATGAACAGTTCAAATCACCT+GGG 0.723585 8.4:+56804591 None:intergenic
AAGGGTTTAAAACAAACACG+AGG 0.770459 8.4:-56805321 MS.gene78671:CDS
CTTTGGACAGAAGTGCACAG+CGG 0.772147 8.4:-56805015 MS.gene78671:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAATGTTTTAATTTATAG+TGG - chr8.4:56804799-56804818 MS.gene78671:CDS 10.0%
!! AATTGATTATATGAGTATCA+AGG - chr8.4:56804705-56804724 MS.gene78671:CDS 20.0%
!! TATATAAAATCCAAGATTCT+TGG - chr8.4:56804989-56805008 MS.gene78671:CDS 20.0%
!! TCAAAAATCTATATGTATGA+TGG - chr8.4:56804964-56804983 MS.gene78671:CDS 20.0%
!! TGGTATATTTAAGTATAAGT+TGG - chr8.4:56805035-56805054 MS.gene78671:CDS 20.0%
!!! TATTTAAGTATAAGTTGGTA+AGG - chr8.4:56805040-56805059 MS.gene78671:CDS 20.0%
! AAAAAATGCAATGTGGATAA+AGG + chr8.4:56805850-56805869 None:intergenic 25.0%
! ACTTGAATGGTTCATAAATA+CGG + chr8.4:56805647-56805666 None:intergenic 25.0%
! AGAATACTATTTGCAGTATA+CGG + chr8.4:56805366-56805385 None:intergenic 25.0%
!! ATTTTTGAACTTCTATTCAC+AGG + chr8.4:56804952-56804971 None:intergenic 25.0%
!!! ACTTTTATTTGTGAGTATGT+AGG - chr8.4:56805549-56805568 MS.gene78671:CDS 25.0%
!!! GTTTTAATTTATAGTGGTCA+GGG - chr8.4:56804805-56804824 MS.gene78671:CDS 25.0%
!!! TGTTTTAATTTATAGTGGTC+AGG - chr8.4:56804804-56804823 MS.gene78671:CDS 25.0%
AAAAAATTGCTTATGCTGCT+TGG - chr8.4:56805073-56805092 MS.gene78671:CDS 30.0%
AAGATTCTTGGATTGAAAGA+GGG - chr8.4:56805001-56805020 MS.gene78671:CDS 30.0%
AAGGTATATCAGAATGTTGA+AGG - chr8.4:56805591-56805610 MS.gene78671:CDS 30.0%
AAGTTCAAATGTATGTAGTG+AGG - chr8.4:56805698-56805717 MS.gene78671:CDS 30.0%
AATAAAACCATTCCTTGTAC+AGG + chr8.4:56805127-56805146 None:intergenic 30.0%
AATTATAAGTGCCAAGAATG+TGG - chr8.4:56805743-56805762 MS.gene78671:CDS 30.0%
ATAACGATGATTATTCGGAA+GGG - chr8.4:56804272-56804291 MS.gene78671:CDS 30.0%
ATTATAAGTGCCAAGAATGT+GGG - chr8.4:56805744-56805763 MS.gene78671:CDS 30.0%
CAAATAGTATTCTAGTGAGT+CGG - chr8.4:56805373-56805392 MS.gene78671:CDS 30.0%
GATGAAGAAATGAATCAACA+AGG - chr8.4:56804241-56804260 MS.gene78671:CDS 30.0%
GATTATATGAGTATCAAGGA+TGG - chr8.4:56804709-56804728 MS.gene78671:CDS 30.0%
GCAGAGTTAACATATGATTA+TGG - chr8.4:56805894-56805913 MS.gene78671:CDS 30.0%
GGTTTGACAAATGAGTAAAA+TGG + chr8.4:56804064-56804083 None:intergenic 30.0%
GTATTTATGAACCATTCAAG+TGG - chr8.4:56805646-56805665 MS.gene78671:CDS 30.0%
GTGAAATAAGTGAAAAAAGC+AGG + chr8.4:56805222-56805241 None:intergenic 30.0%
TCATGCATTCAAAGAAATGA+GGG - chr8.4:56805333-56805352 MS.gene78671:CDS 30.0%
TGGAGATAACGATGATTATT+CGG - chr8.4:56804267-56804286 MS.gene78671:CDS 30.0%
TTACAATTGCAGCTTAAAGA+AGG + chr8.4:56805282-56805301 None:intergenic 30.0%
TTCAACATTCTGATATACCT+TGG + chr8.4:56805592-56805611 None:intergenic 30.0%
TTCATGCATTCAAAGAAATG+AGG - chr8.4:56805332-56805351 MS.gene78671:CDS 30.0%
TTCTTGGCACTTATAATTAG+AGG + chr8.4:56805741-56805760 None:intergenic 30.0%
TTGACAAATGAGTAAAATGG+AGG + chr8.4:56804061-56804080 None:intergenic 30.0%
! ACTAAAAGATGATGGTGATA+GGG - chr8.4:56804426-56804445 MS.gene78671:CDS 30.0%
! TTATTTTCCGCATATAAGAC+TGG + chr8.4:56805822-56805841 None:intergenic 30.0%
!! AGTAATGCTTTGACTTGTAA+AGG - chr8.4:56804565-56804584 MS.gene78671:CDS 30.0%
!! GTAATGCTTTGACTTGTAAA+GGG - chr8.4:56804566-56804585 MS.gene78671:CDS 30.0%
!!! GGATGTTTTCTTTTTTCGAA+TGG - chr8.4:56804642-56804661 MS.gene78671:CDS 30.0%
!!! TGAACATGTTTTGGTAAAAC+AGG + chr8.4:56804004-56804023 None:intergenic 30.0%
AAAAATCGAGTATCACAGAC+TGG - chr8.4:56805447-56805466 MS.gene78671:CDS 35.0%
AATGATGTCGATGATGAGAA+GGG - chr8.4:56805195-56805214 MS.gene78671:CDS 35.0%
ACATCATTGACAAGTGATAC+TGG + chr8.4:56805183-56805202 None:intergenic 35.0%
AGAAGTTATTAACAGAGCCA+AGG - chr8.4:56805572-56805591 MS.gene78671:CDS 35.0%
AGCTATATTTCCCACATTCT+TGG + chr8.4:56805757-56805776 None:intergenic 35.0%
ATGAACAGTTCAAATCACCT+GGG + chr8.4:56805317-56805336 None:intergenic 35.0%
CAAGATTCTTGGATTGAAAG+AGG - chr8.4:56805000-56805019 MS.gene78671:CDS 35.0%
CATTGGAGGAATATGTCTAA+GGG + chr8.4:56805874-56805893 None:intergenic 35.0%
CTCTTTCAATCCAAGAATCT+TGG + chr8.4:56805002-56805021 None:intergenic 35.0%
GAATTATGAACCTAGCTTAC+TGG - chr8.4:56805668-56805687 MS.gene78671:CDS 35.0%
GATAACGATGATTATTCGGA+AGG - chr8.4:56804271-56804290 MS.gene78671:CDS 35.0%
GCACTTATAATTAGAGGAGA+TGG + chr8.4:56805735-56805754 None:intergenic 35.0%
GCATTTCTTTCTCCTTCTAA+AGG + chr8.4:56805955-56805974 None:intergenic 35.0%
GGATAATATTGAGAACTGCA+AGG - chr8.4:56804324-56804343 MS.gene78671:CDS 35.0%
GGTTCATAATTCCACTTGAA+TGG + chr8.4:56805660-56805679 None:intergenic 35.0%
TAAGGGCAAAAAATGCAATG+TGG + chr8.4:56805857-56805876 None:intergenic 35.0%
TCAAAGAGGTAATCTTGCTT+TGG - chr8.4:56804873-56804892 MS.gene78671:CDS 35.0%
TCATATGTTAACTCTGCCAT+TGG + chr8.4:56805891-56805910 None:intergenic 35.0%
TGTTGGAAGAGGAATTTGAT+GGG + chr8.4:56804086-56804105 None:intergenic 35.0%
! AAGGGTTTAAAACAAACACG+AGG - chr8.4:56804584-56804603 MS.gene78671:CDS 35.0%
! CACTAAAAGATGATGGTGAT+AGG - chr8.4:56804425-56804444 MS.gene78671:CDS 35.0%
! TCACCATCATCTTTTAGTGT+CGG + chr8.4:56804424-56804443 None:intergenic 35.0%
! TGTATATGGTGATGATACAG+AGG - chr8.4:56804774-56804793 MS.gene78671:CDS 35.0%
!! AACACGGATTGAACATGTTT+TGG + chr8.4:56804013-56804032 None:intergenic 35.0%
!! ATAAAAGTACCAGCACGTAT+AGG + chr8.4:56805537-56805556 None:intergenic 35.0%
!! ATGGAAGTGTTCAGAACAAA+GGG - chr8.4:56805483-56805502 MS.gene78671:CDS 35.0%
!! GACTGGTTTAAAACAACACA+TGG - chr8.4:56805464-56805483 MS.gene78671:CDS 35.0%
!! TATAAGTTGGTAAGGTTACC+TGG - chr8.4:56805048-56805067 MS.gene78671:CDS 35.0%
!!! GCATAAGCAATTTTTTGACC+AGG + chr8.4:56805069-56805088 None:intergenic 35.0%
AAAATGGAGGAAACCCAGAT+GGG + chr8.4:56804048-56804067 None:intergenic 40.0%
AACAGGTGCTAAACTACGTA+AGG + chr8.4:56803987-56804006 None:intergenic 40.0%
AACCCGACACTAAAAGATGA+TGG - chr8.4:56804418-56804437 MS.gene78671:CDS 40.0%
AAGCCGCTTATTCATGAATG+TGG - chr8.4:56805396-56805415 MS.gene78671:CDS 40.0%
ACAGGTGCTAAACTACGTAA+GGG + chr8.4:56803986-56804005 None:intergenic 40.0%
ACTGATCAGAAGCTTCAAAG+AGG - chr8.4:56804859-56804878 MS.gene78671:CDS 40.0%
ACTGCAAGGAGTTTCTTAGA+AGG - chr8.4:56804338-56804357 MS.gene78671:CDS 40.0%
ACTGGCTGCCAAAAAACATT+TGG + chr8.4:56805804-56805823 None:intergenic 40.0%
AGGAGAAAGAAATGCTTGTG+TGG - chr8.4:56805960-56805979 MS.gene78671:CDS 40.0%
ATTGAAAGAGGGAAATCTGG+CGG - chr8.4:56805012-56805031 MS.gene78671:CDS 40.0%
CAATGATGTCGATGATGAGA+AGG - chr8.4:56805194-56805213 MS.gene78671:CDS 40.0%
CATGAACAGTTCAAATCACC+TGG + chr8.4:56805318-56805337 None:intergenic 40.0%
CCATTGGAGGAATATGTCTA+AGG + chr8.4:56805875-56805894 None:intergenic 40.0%
CCTTAGACATATTCCTCCAA+TGG - chr8.4:56805872-56805891 MS.gene78671:CDS 40.0%
CGAATGGAAATGTGTCTTGT+GGG - chr8.4:56804658-56804677 MS.gene78671:CDS 40.0%
CTGGCTGCCAAAAAACATTT+GGG + chr8.4:56805803-56805822 None:intergenic 40.0%
CTGTTGGAAGAGGAATTTGA+TGG + chr8.4:56804087-56804106 None:intergenic 40.0%
CTTACATCTTCCAGTAAGCT+AGG + chr8.4:56805681-56805700 None:intergenic 40.0%
GAAATGAATCAACAAGGCGA+TGG - chr8.4:56804247-56804266 MS.gene78671:CDS 40.0%
GAACTCTTGTAAGCCCTTAT+TGG + chr8.4:56804217-56804236 None:intergenic 40.0%
GAGTATCAAGGATGGATCTA+AGG - chr8.4:56804717-56804736 MS.gene78671:CDS 40.0%
GATGAAGTTAGAGTCATTCG+AGG - chr8.4:56804916-56804935 MS.gene78671:CDS 40.0%
GATTATGGAATTACCCATGC+TGG - chr8.4:56805909-56805928 MS.gene78671:CDS 40.0%
GATTATTCGGAAGGGTTTGT+AGG - chr8.4:56804280-56804299 MS.gene78671:CDS 40.0%
GGAGAAAGAAATGCTTGTGT+GGG - chr8.4:56805961-56805980 MS.gene78671:CDS 40.0%
GGTTTGCATGCTCAATCAAT+GGG - chr8.4:56804679-56804698 MS.gene78671:CDS 40.0%
GTTGGAAGAGGAATTTGATG+GGG + chr8.4:56804085-56804104 None:intergenic 40.0%
TAAAATGGAGGAAACCCAGA+TGG + chr8.4:56804049-56804068 None:intergenic 40.0%
TAGGAAAACACCGACACATA+GGG + chr8.4:56805422-56805441 None:intergenic 40.0%
TATCAAGGATGGATCTAAGG+AGG - chr8.4:56804720-56804739 MS.gene78671:CDS 40.0%
TATGTTAACTCTGCCATTGG+AGG + chr8.4:56805888-56805907 None:intergenic 40.0%
TCGAATGGAAATGTGTCTTG+TGG - chr8.4:56804657-56804676 MS.gene78671:CDS 40.0%
TGCACTAGACCAAAAGGTTT+CGG + chr8.4:56805258-56805277 None:intergenic 40.0%
TGCCAAAGTGACTCCAATAA+GGG - chr8.4:56804201-56804220 MS.gene78671:CDS 40.0%
TGGAATACTTTCAACCCCAT+TGG + chr8.4:56805163-56805182 None:intergenic 40.0%
TGGATTGAAAGAGGGAAATC+TGG - chr8.4:56805009-56805028 MS.gene78671:CDS 40.0%
TGGCTGCCAAAAAACATTTG+GGG + chr8.4:56805802-56805821 None:intergenic 40.0%
! CACCATCATCTTTTAGTGTC+GGG + chr8.4:56804423-56804442 None:intergenic 40.0%
! CATGTTCAATCCGTGTTTTC+TGG - chr8.4:56804016-56804035 MS.gene78671:CDS 40.0%
! CTCAAAAACCCGAAACCTTT+TGG - chr8.4:56805246-56805265 MS.gene78671:CDS 40.0%
! CTGTGATACTCGATTTTTGC+AGG + chr8.4:56805445-56805464 None:intergenic 40.0%
! CTTGGAAATTGGCTCAAAAG+TGG - chr8.4:56805091-56805110 MS.gene78671:CDS 40.0%
! GAAATTGGCTCAAAAGTGGA+AGG - chr8.4:56805095-56805114 MS.gene78671:CDS 40.0%
! GATACTCGATTTTTGCAGGT+AGG + chr8.4:56805441-56805460 None:intergenic 40.0%
! GTTGTTTCGTCAGGTGTATA+TGG - chr8.4:56804760-56804779 MS.gene78671:CDS 40.0%
! TGACGTTTGATTCGATTCGA+AGG - chr8.4:56804470-56804489 MS.gene78671:CDS 40.0%
! TGATAAACGAAAGCGTAGCA+CGG - chr8.4:56804303-56804322 MS.gene78671:CDS 40.0%
! TGCTTATGCTGCTTGGAAAT+TGG - chr8.4:56805080-56805099 MS.gene78671:CDS 40.0%
!! CATGGAAGTGTTCAGAACAA+AGG - chr8.4:56805482-56805501 MS.gene78671:CDS 40.0%
!!! GTTGCTCCCCAAATGTTTTT+TGG - chr8.4:56805793-56805812 MS.gene78671:CDS 40.0%
AACAAACACGAGGAGAAGAG+CGG - chr8.4:56804594-56804613 MS.gene78671:CDS 45.0%
AGAACAAAGGGTAGAGGTTG+GGG - chr8.4:56805495-56805514 MS.gene78671:CDS 45.0%
AGCCCTTATTGGAGTCACTT+TGG + chr8.4:56804206-56804225 None:intergenic 45.0%
ATGAATGTGGCCCTATGTGT+CGG - chr8.4:56805409-56805428 MS.gene78671:CDS 45.0%
ATGCCAACTTGAAGAGTCGA+AGG - chr8.4:56804498-56804517 MS.gene78671:CDS 45.0%
ATTCTTGCTGACCTCTCCAA+TGG - chr8.4:56805144-56805163 MS.gene78671:CDS 45.0%
CAGAACAAAGGGTAGAGGTT+GGG - chr8.4:56805494-56805513 MS.gene78671:CDS 45.0%
CTGCCAAAGTGACTCCAATA+AGG - chr8.4:56804200-56804219 MS.gene78671:CDS 45.0%
GAAGAAGAACAAAACTCGCG+AGG - chr8.4:56804360-56804379 MS.gene78671:CDS 45.0%
GCACTAGACCAAAAGGTTTC+GGG + chr8.4:56805257-56805276 None:intergenic 45.0%
GGGCCACATTCATGAATAAG+CGG + chr8.4:56805402-56805421 None:intergenic 45.0%
GGGTTTGCATGCTCAATCAA+TGG - chr8.4:56804678-56804697 MS.gene78671:CDS 45.0%
GGTGGTACGAGTTCTTATGT+TGG - chr8.4:56804391-56804410 MS.gene78671:CDS 45.0%
GTAGGAAAACACCGACACAT+AGG + chr8.4:56805423-56805442 None:intergenic 45.0%
GTGTTCAGAACAAAGGGTAG+AGG - chr8.4:56805489-56805508 MS.gene78671:CDS 45.0%
GTTCCTTCGACTCTTCAAGT+TGG + chr8.4:56804504-56804523 None:intergenic 45.0%
TACTTTCAACCCCATTGGAG+AGG + chr8.4:56805158-56805177 None:intergenic 45.0%
TCAGAACAAAGGGTAGAGGT+TGG - chr8.4:56805493-56805512 MS.gene78671:CDS 45.0%
TGGATCTAAGGAGGATACTG+TGG - chr8.4:56804729-56804748 MS.gene78671:CDS 45.0%
TGGGTATCCACCAGAAAACA+CGG + chr8.4:56804029-56804048 None:intergenic 45.0%
TTCTTGCTGACCTCTCCAAT+GGG - chr8.4:56805145-56805164 MS.gene78671:CDS 45.0%
TTGCATGCTCAATCAATGGG+TGG - chr8.4:56804682-56804701 MS.gene78671:CDS 45.0%
! AGATGATGGTGATAGGGAGT+CGG - chr8.4:56804432-56804451 MS.gene78671:CDS 45.0%
! CGTTTGATTCGATTCGAAGG+AGG - chr8.4:56804473-56804492 MS.gene78671:CDS 45.0%
! GTTCAATCCGTGTTTTCTGG+TGG - chr8.4:56804019-56804038 MS.gene78671:CDS 45.0%
! TCTTCAGGTTCTGTTGGAAG+AGG + chr8.4:56804097-56804116 None:intergenic 45.0%
! TTGGCAGCCAGTCTTATATG+CGG - chr8.4:56805812-56805831 MS.gene78671:CDS 45.0%
! TTTCTGGTGGATACCCATCT+GGG - chr8.4:56804032-56804051 MS.gene78671:CDS 45.0%
!! TTTTCTGGTGGATACCCATC+TGG - chr8.4:56804031-56804050 MS.gene78671:CDS 45.0%
ACAAACACGAGGAGAAGAGC+GGG - chr8.4:56804595-56804614 MS.gene78671:CDS 50.0%
ACACTGGATCCTATACGTGC+TGG - chr8.4:56805525-56805544 MS.gene78671:CDS 50.0%
ACATCCCCAATCTCAATCCC+AGG + chr8.4:56804628-56804647 None:intergenic 50.0%
ATTACCCATGCTGGTCATGC+TGG - chr8.4:56805918-56805937 MS.gene78671:CDS 50.0%
CAAAGTAGCCGAGAAAACGC+CGG - chr8.4:56804132-56804151 MS.gene78671:CDS 50.0%
GAACAAAGGGTAGAGGTTGG+GGG - chr8.4:56805496-56805515 MS.gene78671:CDS 50.0%
GAAGGCTGCACTAGACCAAA+AGG + chr8.4:56805264-56805283 None:intergenic 50.0%
GAGGTAGCAGTGCCTTTAGA+AGG - chr8.4:56805940-56805959 MS.gene78671:CDS 50.0%
GCAGGTTCCTGTACAAGGAA+TGG - chr8.4:56805117-56805136 MS.gene78671:CDS 50.0%
GCATCAAGAGGGGTTTCTTC+AGG + chr8.4:56804112-56804131 None:intergenic 50.0%
TCTTGCTGACCTCTCCAATG+GGG - chr8.4:56805146-56805165 MS.gene78671:CDS 50.0%
TGGTGCCTGGGATTGAGATT+GGG - chr8.4:56804620-56804639 MS.gene78671:CDS 50.0%
TGTAACACAGCATGTGTCCC+AGG - chr8.4:56805297-56805316 MS.gene78671:CDS 50.0%
TTGGCTCAAAAGTGGAAGGC+AGG - chr8.4:56805099-56805118 MS.gene78671:CDS 50.0%
! CGGCTACTTTGGCATCAAGA+GGG + chr8.4:56804123-56804142 None:intergenic 50.0%
! CTTTGGACAGAAGTGCACAG+CGG - chr8.4:56804890-56804909 MS.gene78671:CDS 50.0%
! GCGTTAAGCGTTGTTTCGTC+AGG - chr8.4:56804751-56804770 MS.gene78671:CDS 50.0%
! GGCTACTTTGGCATCAAGAG+GGG + chr8.4:56804122-56804141 None:intergenic 50.0%
! GGGGTTTCTTCAGGTTCTGT+TGG + chr8.4:56804103-56804122 None:intergenic 50.0%
! TCGGCTACTTTGGCATCAAG+AGG + chr8.4:56804124-56804143 None:intergenic 50.0%
! TGCTTTCACCGGCGTTTTCT+CGG + chr8.4:56804143-56804162 None:intergenic 50.0%
!! GCAAAGTGCCGTGGTTTCTT+TGG - chr8.4:56805987-56806006 MS.gene78671:CDS 50.0%
!! TGCACTTGCTATCAAGCGTG+CGG - chr8.4:56804531-56804550 MS.gene78671:CDS 50.0%
ACCTCCAGCATGACCAGCAT+GGG + chr8.4:56805925-56805944 None:intergenic 55.0%
GAAAGAGGGAAATCTGGCGG+TGG - chr8.4:56805015-56805034 MS.gene78671:CDS 55.0%
GGAAGGCAGGTTCCTGTACA+AGG - chr8.4:56805112-56805131 MS.gene78671:CDS 55.0%
GGTGCCTGGGATTGAGATTG+GGG - chr8.4:56804621-56804640 MS.gene78671:CDS 55.0%
GTGGTGCCTGGGATTGAGAT+TGG - chr8.4:56804619-56804638 MS.gene78671:CDS 55.0%
TACCTCCAGCATGACCAGCA+TGG + chr8.4:56805926-56805945 None:intergenic 55.0%
! AAAACTCGCGAGGCGTCTGT+TGG - chr8.4:56804370-56804389 MS.gene78671:CDS 55.0%
! CGGCGTTTTCTCGGCTACTT+TGG + chr8.4:56804134-56804153 None:intergenic 55.0%
! GGAGTCACTTTGGCAGCAAC+AGG + chr8.4:56804196-56804215 None:intergenic 55.0%
ACCCATGCTGGTCATGCTGG+AGG - chr8.4:56805921-56805940 MS.gene78671:CDS 60.0%
AGGTTGGGGGCTTCGAACAC+TGG - chr8.4:56805509-56805528 MS.gene78671:CDS 60.0%
!! GCTGCTGCTGCTGCTTTCAC+CGG + chr8.4:56804154-56804173 None:intergenic 60.0%
!! TGTGGGTCAGCAAAGTGCCG+TGG - chr8.4:56805978-56805997 MS.gene78671:CDS 60.0%
! ACTCGCGAGGCGTCTGTTGG+TGG - chr8.4:56804373-56804392 MS.gene78671:CDS 65.0%
AGAAGAGCGGGCGTGGTGCC+TGG - chr8.4:56804607-56804626 MS.gene78671:CDS 70.0%
CACGAGGAGAAGAGCGGGCG+TGG - chr8.4:56804600-56804619 MS.gene78671:CDS 70.0%
GAAGAGCGGGCGTGGTGCCT+GGG - chr8.4:56804608-56804627 MS.gene78671:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 56803914 56806013 56803914 ID=MS.gene78671
chr8.4 mRNA 56803914 56806013 56803914 ID=MS.gene78671.t1;Parent=MS.gene78671
chr8.4 exon 56803914 56806013 56803914 ID=MS.gene78671.t1.exon1;Parent=MS.gene78671.t1
chr8.4 CDS 56803914 56806013 56803914 ID=cds.MS.gene78671.t1;Parent=MS.gene78671.t1
Gene Sequence

>MS.gene78671

ATGGAAGAACAACACAACAACAACACTGCTTCAGATTCATTTGACAAATCTAAGATTGTTGAAGTCAAACCCTTACGTAGTTTAGCACCTGTTTTACCAAAACATGTTCAATCCGTGTTTTCTGGTGGATACCCATCTGGGTTTCCTCCATTTTACTCATTTGTCAAACCCCATCAAATTCCTCTTCCAACAGAACCTGAAGAAACCCCTCTTGATGCCAAAGTAGCCGAGAAAACGCCGGTGAAAGCAGCAGCAGCAGCAGCAGCTGCTCATGACACTCCTGTTGCTGCCAAAGTGACTCCAATAAGGGCTTACAAGAGTTCACATGATGAAGAAATGAATCAACAAGGCGATGGAGATAACGATGATTATTCGGAAGGGTTTGTAGGTGATAAACGAAAGCGTAGCACGGATAATATTGAGAACTGCAAGGAGTTTCTTAGAAGGAAGAAGAACAAAACTCGCGAGGCGTCTGTTGGTGGTACGAGTTCTTATGTTGGTGTTAACCCGACACTAAAAGATGATGGTGATAGGGAGTCGGTTAATCATGTGCTTATGACGTTTGATTCGATTCGAAGGAGGCTATGCCAACTTGAAGAGTCGAAGGAACTGAACAATGCACTTGCTATCAAGCGTGCGGATCTAAGAGCGAGTAATGCTTTGACTTGTAAAGGGTTTAAAACAAACACGAGGAGAAGAGCGGGCGTGGTGCCTGGGATTGAGATTGGGGATGTTTTCTTTTTTCGAATGGAAATGTGTCTTGTGGGTTTGCATGCTCAATCAATGGGTGGAATTGATTATATGAGTATCAAGGATGGATCTAAGGAGGATACTGTGGCGTTAAGCGTTGTTTCGTCAGGTGTATATGGTGATGATACAGAGGATAATAATGTTTTAATTTATAGTGGTCAGGGTGAGAATTTCAACAAGAAAGATAAACATGTGACTGATCAGAAGCTTCAAAGAGGTAATCTTGCTTTGGACAGAAGTGCACAGCGGCACGATGAAGTTAGAGTCATTCGAGGCGTGAGAGATCCTGTGAATAGAAGTTCAAAAATCTATATGTATGATGGTTTATATAAAATCCAAGATTCTTGGATTGAAAGAGGGAAATCTGGCGGTGGTATATTTAAGTATAAGTTGGTAAGGTTACCTGGTCAAAAAATTGCTTATGCTGCTTGGAAATTGGCTCAAAAGTGGAAGGCAGGTTCCTGTACAAGGAATGGTTTTATTCTTGCTGACCTCTCCAATGGGGTTGAAAGTATTCCAGTATCACTTGTCAATGATGTCGATGATGAGAAGGGTCCTGCTTTTTTCACTTATTTCACGTCTCTCAAAAACCCGAAACCTTTTGGTCTAGTGCAGCCTTCTTTAAGCTGCAATTGTAACACAGCATGTGTCCCAGGTGATTTGAACTGTTCATGCATTCAAAGAAATGAGGGTGATTTTCCGTATACTGCAAATAGTATTCTAGTGAGTCGGAAGCCGCTTATTCATGAATGTGGCCCTATGTGTCGGTGTTTTCCTACCTGCAAAAATCGAGTATCACAGACTGGTTTAAAACAACACATGGAAGTGTTCAGAACAAAGGGTAGAGGTTGGGGGCTTCGAACACTGGATCCTATACGTGCTGGTACTTTTATTTGTGAGTATGTAGGAGAAGTTATTAACAGAGCCAAGGTATATCAGAATGTTGAAGGAGATAATGACGAATATGTTTTTGATACAAGCCGTATTTATGAACCATTCAAGTGGAATTATGAACCTAGCTTACTGGAAGATGTAAGTTCAAATGTATGTAGTGAGGATTATACTATACCATCTCCTCTAATTATAAGTGCCAAGAATGTGGGAAATATAGCTAGATTCATGAATCATAGTTGCTCCCCAAATGTTTTTTGGCAGCCAGTCTTATATGCGGAAAATAATCAATCCTTTATCCACATTGCATTTTTTGCCCTTAGACATATTCCTCCAATGGCAGAGTTAACATATGATTATGGAATTACCCATGCTGGTCATGCTGGAGGTAGCAGTGCCTTTAGAAGGAGAAAGAAATGCTTGTGTGGGTCAGCAAAGTGCCGTGGTTTCTTTGGTTAA
Protein sequence

>MS.gene78671.t1

MEEQHNNNTASDSFDKSKIVEVKPLRSLAPVLPKHVQSVFSGGYPSGFPPFYSFVKPHQIPLPTEPEETPLDAKVAEKTPVKAAAAAAAAHDTPVAAKVTPIRAYKSSHDEEMNQQGDGDNDDYSEGFVGDKRKRSTDNIENCKEFLRRKKNKTREASVGGTSSYVGVNPTLKDDGDRESVNHVLMTFDSIRRRLCQLEESKELNNALAIKRADLRASNALTCKGFKTNTRRRAGVVPGIEIGDVFFFRMEMCLVGLHAQSMGGIDYMSIKDGSKEDTVALSVVSSGVYGDDTEDNNVLIYSGQGENFNKKDKHVTDQKLQRGNLALDRSAQRHDEVRVIRGVRDPVNRSSKIYMYDGLYKIQDSWIERGKSGGGIFKYKLVRLPGQKIAYAAWKLAQKWKAGSCTRNGFILADLSNGVESIPVSLVNDVDDEKGPAFFTYFTSLKNPKPFGLVQPSLSCNCNTACVPGDLNCSCIQRNEGDFPYTANSILVSRKPLIHECGPMCRCFPTCKNRVSQTGLKQHMEVFRTKGRGWGLRTLDPIRAGTFICEYVGEVINRAKVYQNVEGDNDEYVFDTSRIYEPFKWNYEPSLLEDVSSNVCSEDYTIPSPLIISAKNVGNIARFMNHSCSPNVFWQPVLYAENNQSFIHIAFFALRHIPPMAELTYDYGITHAGHAGGSSAFRRRKKCLCGSAKCRGFFG