Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018517.t1 | XP_003625555.1 | 77.1 | 297 | 57 | 3 | 1 | 297 | 1 | 286 | 2.40E-91 | 345.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018517.t1 | Q58FZ0 | 44.3 | 282 | 114 | 8 | 1 | 277 | 1 | 244 | 3.1e-34 | 147.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018517.t1 | G7L1N2 | 77.1 | 297 | 57 | 3 | 1 | 297 | 1 | 286 | 1.8e-91 | 345.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene30857 | MS.gene018517 | PPI |
| MS.gene018517 | MS.gene09786 | PPI |
| MS.gene018517 | MS.gene029909 | PPI |
| MS.gene018517 | MS.gene007484 | PPI |
| MS.gene018517 | MS.gene068551 | PPI |
| MS.gene018517 | MS.gene073830 | PPI |
| MS.gene018517 | MS.gene30857 | PPI |
| MS.gene018517 | MS.gene22481 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018517.t1 | MTR_7g100450 | 90.236 | 297 | 18 | 3 | 1 | 297 | 1 | 286 | 2.10e-164 | 458 |
| MS.gene018517.t1 | MTR_7g100450 | 91.286 | 241 | 16 | 2 | 1 | 241 | 1 | 236 | 4.69e-130 | 370 |
| MS.gene018517.t1 | MTR_1g067560 | 55.822 | 292 | 96 | 9 | 1 | 292 | 1 | 259 | 1.83e-87 | 262 |
| MS.gene018517.t1 | MTR_4g062450 | 33.692 | 279 | 118 | 8 | 1 | 277 | 1 | 214 | 5.56e-32 | 119 |
| MS.gene018517.t1 | MTR_6g086020 | 54.688 | 64 | 29 | 0 | 214 | 277 | 65 | 128 | 3.50e-21 | 87.4 |
| MS.gene018517.t1 | MTR_8g103820 | 53.125 | 64 | 30 | 0 | 214 | 277 | 66 | 129 | 1.65e-20 | 85.9 |
| MS.gene018517.t1 | MTR_7g013660 | 40.000 | 85 | 50 | 1 | 212 | 295 | 2 | 86 | 5.56e-14 | 67.8 |
| MS.gene018517.t1 | MTR_3g117890 | 46.377 | 69 | 35 | 1 | 214 | 280 | 26 | 94 | 5.28e-11 | 60.5 |
| MS.gene018517.t1 | MTR_4g073040 | 38.372 | 86 | 51 | 1 | 201 | 284 | 15 | 100 | 6.19e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene018517.t1 | AT2G37390 | 40.426 | 282 | 125 | 8 | 1 | 277 | 1 | 244 | 1.17e-53 | 176 |
| MS.gene018517.t1 | AT2G37390 | 41.135 | 282 | 122 | 9 | 1 | 277 | 1 | 243 | 4.45e-53 | 174 |
| MS.gene018517.t1 | AT3G53530 | 37.500 | 280 | 125 | 7 | 1 | 277 | 1 | 233 | 4.32e-41 | 143 |
| MS.gene018517.t1 | AT3G53530 | 37.367 | 281 | 125 | 8 | 1 | 277 | 1 | 234 | 2.89e-39 | 138 |
| MS.gene018517.t1 | AT5G02600 | 52.555 | 137 | 45 | 3 | 164 | 280 | 180 | 316 | 5.49e-35 | 129 |
| MS.gene018517.t1 | AT5G02600 | 52.555 | 137 | 45 | 3 | 164 | 280 | 180 | 316 | 5.49e-35 | 129 |
| MS.gene018517.t1 | AT2G28660 | 69.014 | 71 | 22 | 0 | 207 | 277 | 176 | 246 | 1.01e-28 | 111 |
| MS.gene018517.t1 | AT3G24450 | 50.000 | 64 | 32 | 0 | 214 | 277 | 74 | 137 | 1.31e-16 | 75.5 |
| MS.gene018517.t1 | AT1G66240 | 43.038 | 79 | 42 | 2 | 201 | 277 | 20 | 97 | 1.12e-14 | 69.3 |
| MS.gene018517.t1 | AT3G56240 | 46.970 | 66 | 34 | 1 | 214 | 278 | 3 | 68 | 8.90e-14 | 67.4 |
| MS.gene018517.t1 | AT3G56240 | 46.970 | 66 | 34 | 1 | 214 | 278 | 3 | 68 | 8.90e-14 | 67.4 |
| MS.gene018517.t1 | AT5G27690 | 40.449 | 89 | 46 | 3 | 191 | 278 | 13 | 95 | 9.57e-13 | 68.2 |
Find 48 sgRNAs with CRISPR-Local
Find 109 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTTTGTTGTACTAGATTT+TGG | 0.170922 | 7.4:+9809967 | None:intergenic |
| ATTAGATTATGACCCTGTTT+TGG | 0.240827 | 7.4:-9810085 | MS.gene018517:CDS |
| CCAGAAGTTGCTTCATCAAT+TGG | 0.294671 | 7.4:-9808776 | MS.gene018517:CDS |
| GATTTGCATACCTTGCATTC+TGG | 0.322525 | 7.4:+9809741 | None:intergenic |
| ACCAACTACTGTAACCTTCT+TGG | 0.326525 | 7.4:+9808859 | None:intergenic |
| GCTTGGTGAGACAGTTTCTT+TGG | 0.328826 | 7.4:-9810115 | MS.gene018517:CDS |
| ATGGACAAGTTTAAGGTTGA+TGG | 0.338522 | 7.4:+9810371 | None:intergenic |
| AGGTGAAGACTGCACAAATT+TGG | 0.341639 | 7.4:-9808799 | MS.gene018517:CDS |
| TCTACCACCAAAGTGATTAA+TGG | 0.359645 | 7.4:+9810488 | None:intergenic |
| GTTGCAGATTGTGGTGTTAA+GGG | 0.363212 | 7.4:-9809812 | MS.gene018517:intron |
| TGTTGCAGATTGTGGTGTTA+AGG | 0.365637 | 7.4:-9809813 | MS.gene018517:intron |
| CCAATTGATGAAGCAACTTC+TGG | 0.381921 | 7.4:+9808776 | None:intergenic |
| CTTCTTAAAATACTATCAAC+TGG | 0.402151 | 7.4:+9810195 | None:intergenic |
| ACCTTAGTTAAACCCAAAAC+AGG | 0.426654 | 7.4:+9810072 | None:intergenic |
| AAGGTTGTGAAGGGAAGGTT+AGG | 0.448311 | 7.4:-9809774 | MS.gene018517:CDS |
| ATGATTAGTGTTAAGACATA+TGG | 0.448878 | 7.4:+9810542 | None:intergenic |
| ATGCTTGCCATTACGCTCAA+TGG | 0.459884 | 7.4:+9808827 | None:intergenic |
| GCCAAGAAGGTTACAGTAGT+TGG | 0.460899 | 7.4:-9808860 | MS.gene018517:CDS |
| GTGTCAGTGAGATCTCTTGC+TGG | 0.463146 | 7.4:+9810420 | None:intergenic |
| TCCAACACCATTAATCACTT+TGG | 0.465049 | 7.4:-9810495 | MS.gene018517:CDS |
| GGCTGCAAAGTCTATGTTGA+AGG | 0.474842 | 7.4:+9808880 | None:intergenic |
| GTTGCTTCATCAATTGGATC+TGG | 0.476518 | 7.4:-9808770 | MS.gene018517:CDS |
| GGTGAGACAGTTTCTTTGGA+TGG | 0.476989 | 7.4:-9810111 | MS.gene018517:CDS |
| CATAGACTTTGCAGCCAAGA+AGG | 0.492938 | 7.4:-9808873 | MS.gene018517:CDS |
| AGGGTTTCTCTACACTGTAA+AGG | 0.497170 | 7.4:-9809793 | MS.gene018517:CDS |
| TGGACAAGTTTAAGGTTGAT+GGG | 0.502719 | 7.4:+9810372 | None:intergenic |
| AACACCATTAATCACTTTGG+TGG | 0.517962 | 7.4:-9810492 | MS.gene018517:CDS |
| ACCAAAGTGATTAATGGTGT+TGG | 0.523108 | 7.4:+9810494 | None:intergenic |
| ACTTCGTCAAGATATTTGCT+TGG | 0.524728 | 7.4:-9810132 | MS.gene018517:CDS |
| GGAGGAGTGATTAAATCAGA+AGG | 0.533878 | 7.4:+9810156 | None:intergenic |
| GATGGGGTTGTGGCGATCAA+TGG | 0.538267 | 7.4:+9810464 | None:intergenic |
| AGTTTAAGGTTGATGGGTGA+AGG | 0.543572 | 7.4:+9810378 | None:intergenic |
| GTTAAGACATATGGCTGTTG+AGG | 0.547442 | 7.4:+9810551 | None:intergenic |
| GATCTGTGATGATGGGGTTG+TGG | 0.561276 | 7.4:+9810454 | None:intergenic |
| TGTAACTCCATTGAGCGTAA+TGG | 0.561591 | 7.4:-9808834 | MS.gene018517:CDS |
| CTGTAAAGGTTGTGAAGGGA+AGG | 0.564183 | 7.4:-9809779 | MS.gene018517:CDS |
| CTACACTGTAAAGGTTGTGA+AGG | 0.566064 | 7.4:-9809784 | MS.gene018517:CDS |
| AGGTTGATGGGTGAAGGAGA+AGG | 0.573141 | 7.4:+9810384 | None:intergenic |
| ATCTCACTGACACTGCTCCT+AGG | 0.576489 | 7.4:-9810410 | MS.gene018517:CDS |
| AAACATCTCTCCAGAATGCA+AGG | 0.579496 | 7.4:-9809751 | MS.gene018517:intron |
| AGCAAATATCTTGACGAAGT+AGG | 0.587565 | 7.4:+9810135 | None:intergenic |
| CGTAATGGCAAGCATATCAA+AGG | 0.592668 | 7.4:-9808819 | MS.gene018517:CDS |
| AAATATCTTGACGAAGTAGG+AGG | 0.605384 | 7.4:+9810138 | None:intergenic |
| TACACTGTAAAGGTTGTGAA+GGG | 0.606760 | 7.4:-9809783 | MS.gene018517:CDS |
| GGTGAAGGAGAAGGTGACCT+AGG | 0.609366 | 7.4:+9810393 | None:intergenic |
| CCTTAGTTAAACCCAAAACA+GGG | 0.664376 | 7.4:+9810073 | None:intergenic |
| AAAATCTAGTACAACAAACC+AGG | 0.681480 | 7.4:-9809965 | MS.gene018517:intron |
| GGAGTGATTAAATCAGAAGG+TGG | 0.685023 | 7.4:+9810159 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAATTTAATCTTTAGTT+GGG | + | chr7.4:9810107-9810126 | None:intergenic | 15.0% |
| !! | AGGTTATATATGAATATTAT+TGG | - | chr7.4:9809810-9809829 | MS.gene018517:intron | 15.0% |
| !! | TACAAAATTTAATCTTTAGT+TGG | + | chr7.4:9810108-9810127 | None:intergenic | 15.0% |
| !! | TTTCACATATAAGAAAAATA+AGG | - | chr7.4:9809790-9809809 | MS.gene018517:CDS | 15.0% |
| !!! | ACTAAAGATTAAATTTTGTA+TGG | - | chr7.4:9810108-9810127 | MS.gene018517:CDS | 15.0% |
| !!! | TTAAGATACATTCTTTTAAA+TGG | + | chr7.4:9809910-9809929 | None:intergenic | 15.0% |
| !! | AAATGAAATAACCATGTTTA+TGG | - | chr7.4:9810335-9810354 | MS.gene018517:CDS | 20.0% |
| !! | ACAAAAAAATAACGTTTAGA+AGG | + | chr7.4:9809761-9809780 | None:intergenic | 20.0% |
| !! | TATTTAATATCAAACACAAG+TGG | - | chr7.4:9810142-9810161 | MS.gene018517:CDS | 20.0% |
| !! | TTTCATTTCGAAAAATCAAT+CGG | + | chr7.4:9810323-9810342 | None:intergenic | 20.0% |
| !!! | CTTTACAAACTAATTTTGTA+AGG | + | chr7.4:9810224-9810243 | None:intergenic | 20.0% |
| !!! | TAATTTTGTAAGGTTAAGTT+AGG | + | chr7.4:9810214-9810233 | None:intergenic | 20.0% |
| !!! | TATCGTTATTATTTTGTTGA+GGG | + | chr7.4:9809877-9809896 | None:intergenic | 20.0% |
| !!! | TTCAATATTTCTTTTTGCAT+TGG | - | chr7.4:9810394-9810413 | MS.gene018517:CDS | 20.0% |
| !!! | TTTTACAGAATCTTAATAAC+TGG | + | chr7.4:9809674-9809693 | None:intergenic | 20.0% |
| !!! | TTTTGCATTGGTAATTAAAT+GGG | - | chr7.4:9810406-9810425 | MS.gene018517:CDS | 20.0% |
| !!! | TTTTTGCATTGGTAATTAAA+TGG | - | chr7.4:9810405-9810424 | MS.gene018517:CDS | 20.0% |
| ! | AAAAAATAACGTTTAGAAGG+TGG | + | chr7.4:9809758-9809777 | None:intergenic | 25.0% |
| ! | AATATGACCTATTTAGTAGT+GGG | + | chr7.4:9810258-9810277 | None:intergenic | 25.0% |
| ! | ATGATTAGTGTTAAGACATA+TGG | + | chr7.4:9808782-9808801 | None:intergenic | 25.0% |
| ! | CTTCTTAAAATACTATCAAC+TGG | + | chr7.4:9809129-9809148 | None:intergenic | 25.0% |
| ! | TTTGAATCCATGTAAAAACA+TGG | + | chr7.4:9810285-9810304 | None:intergenic | 25.0% |
| !! | GATTAAATTTTGTATGGAGA+TGG | - | chr7.4:9810114-9810133 | MS.gene018517:CDS | 25.0% |
| !!! | ATAGTATTTTAAGAAGGAGT+AGG | - | chr7.4:9809133-9809152 | MS.gene018517:intron | 25.0% |
| !!! | ATTCTATCCATGTTTTTACA+TGG | - | chr7.4:9810275-9810294 | MS.gene018517:CDS | 25.0% |
| !!! | CAGTTGATAGTATTTTAAGA+AGG | - | chr7.4:9809127-9809146 | MS.gene018517:intron | 25.0% |
| !!! | GTATCGTTATTATTTTGTTG+AGG | + | chr7.4:9809878-9809897 | None:intergenic | 25.0% |
| !!! | TAGTATTTTAAGAAGGAGTA+GGG | - | chr7.4:9809134-9809153 | MS.gene018517:intron | 25.0% |
| AAAATCTAGTACAACAAACC+AGG | - | chr7.4:9809356-9809375 | MS.gene018517:intron | 30.0% | |
| AATTACTCCCACTACTAAAT+AGG | - | chr7.4:9810248-9810267 | MS.gene018517:CDS | 30.0% | |
| ATAAAACGCTACCATAAACA+TGG | + | chr7.4:9810349-9810368 | None:intergenic | 30.0% | |
| CTTCAATACCATTTGATTGA+TGG | + | chr7.4:9809635-9809654 | None:intergenic | 30.0% | |
| GAATATGACCTATTTAGTAG+TGG | + | chr7.4:9810259-9810278 | None:intergenic | 30.0% | |
| TTTAACGAGGCTTATATCAA+AGG | - | chr7.4:9809988-9810007 | MS.gene018517:CDS | 30.0% | |
| ! | ATTAGATTATGACCCTGTTT+TGG | - | chr7.4:9809236-9809255 | MS.gene018517:intron | 30.0% |
| ! | TCTGTTGTTTGTTTCATGTT+TGG | - | chr7.4:9809465-9809484 | MS.gene018517:intron | 30.0% |
| ! | TTAGATTATGACCCTGTTTT+GGG | - | chr7.4:9809237-9809256 | MS.gene018517:intron | 30.0% |
| !! | CTTTTTCATGGACAAGTTTA+AGG | + | chr7.4:9808960-9808979 | None:intergenic | 30.0% |
| !! | TCTAGACAATGTTTTTAACG+AGG | - | chr7.4:9809975-9809994 | MS.gene018517:CDS | 30.0% |
| !!! | TGGTTTGTTGTACTAGATTT+TGG | + | chr7.4:9809357-9809376 | None:intergenic | 30.0% |
| !!! | TGTTTTTCTTGGCTTTTTCA+TGG | + | chr7.4:9808972-9808991 | None:intergenic | 30.0% |
| AAATATCTTGACGAAGTAGG+AGG | + | chr7.4:9809186-9809205 | None:intergenic | 35.0% | |
| AACACCATTAATCACTTTGG+TGG | - | chr7.4:9808829-9808848 | MS.gene018517:CDS | 35.0% | |
| ACCAAAGTGATTAATGGTGT+TGG | + | chr7.4:9808830-9808849 | None:intergenic | 35.0% | |
| ACCTTAGTTAAACCCAAAAC+AGG | + | chr7.4:9809252-9809271 | None:intergenic | 35.0% | |
| ACTTATAGTAGCTACTAGCT+AGG | + | chr7.4:9809729-9809748 | None:intergenic | 35.0% | |
| ACTTCGTCAAGATATTTGCT+TGG | - | chr7.4:9809189-9809208 | MS.gene018517:intron | 35.0% | |
| AGCAAATATCTTGACGAAGT+AGG | + | chr7.4:9809189-9809208 | None:intergenic | 35.0% | |
| AGGCTTATATCAAAGGACAA+AGG | - | chr7.4:9809995-9810014 | MS.gene018517:CDS | 35.0% | |
| ATAATGATCCATAACCAGTG+AGG | - | chr7.4:9810044-9810063 | MS.gene018517:CDS | 35.0% | |
| CCTTAGTTAAACCCAAAACA+GGG | + | chr7.4:9809251-9809270 | None:intergenic | 35.0% | |
| TACACTGTAAAGGTTGTGAA+GGG | - | chr7.4:9809538-9809557 | MS.gene018517:intron | 35.0% | |
| TCCAACACCATTAATCACTT+TGG | - | chr7.4:9808826-9808845 | MS.gene018517:CDS | 35.0% | |
| TCTACCACCAAAGTGATTAA+TGG | + | chr7.4:9808836-9808855 | None:intergenic | 35.0% | |
| TGATCAGACCATCAATCAAA+TGG | - | chr7.4:9809624-9809643 | MS.gene018517:intron | 35.0% | |
| ! | ATGGACAAGTTTAAGGTTGA+TGG | + | chr7.4:9808953-9808972 | None:intergenic | 35.0% |
| ! | ATTGGTAATTAAATGGGCAG+GGG | - | chr7.4:9810412-9810431 | MS.gene018517:CDS | 35.0% |
| ! | CATTGGTAATTAAATGGGCA+GGG | - | chr7.4:9810411-9810430 | MS.gene018517:CDS | 35.0% |
| ! | CTTTTTGGATCTGTGATGAT+GGG | + | chr7.4:9808877-9808896 | None:intergenic | 35.0% |
| ! | GTGAATTTTGTTGCAGATTG+TGG | - | chr7.4:9809500-9809519 | MS.gene018517:intron | 35.0% |
| ! | TCTTTTTGGATCTGTGATGA+TGG | + | chr7.4:9808878-9808897 | None:intergenic | 35.0% |
| ! | TGGACAAGTTTAAGGTTGAT+GGG | + | chr7.4:9808952-9808971 | None:intergenic | 35.0% |
| !! | TTTTTGGATCTGTGATGATG+GGG | + | chr7.4:9808876-9808895 | None:intergenic | 35.0% |
| !!! | CTTTGAAGCAGTGTTTTTCT+TGG | + | chr7.4:9808983-9809002 | None:intergenic | 35.0% |
| !!! | TGTACTAGATTTTGGAACAG+AGG | + | chr7.4:9809349-9809368 | None:intergenic | 35.0% |
| AAACATCTCTCCAGAATGCA+AGG | - | chr7.4:9809570-9809589 | MS.gene018517:intron | 40.0% | |
| ACCAACTACTGTAACCTTCT+TGG | + | chr7.4:9810465-9810484 | None:intergenic | 40.0% | |
| AGGGTTTCTCTACACTGTAA+AGG | - | chr7.4:9809528-9809547 | MS.gene018517:intron | 40.0% | |
| AGGTGAAGACTGCACAAATT+TGG | - | chr7.4:9810522-9810541 | MS.gene018517:CDS | 40.0% | |
| CATGAAACAAACAACAGACC+TGG | + | chr7.4:9809463-9809482 | None:intergenic | 40.0% | |
| CCAATTGATGAAGCAACTTC+TGG | + | chr7.4:9810548-9810567 | None:intergenic | 40.0% | |
| CCAGAAGTTGCTTCATCAAT+TGG | - | chr7.4:9810545-9810564 | MS.gene018517:CDS | 40.0% | |
| CGTAATGGCAAGCATATCAA+AGG | - | chr7.4:9810502-9810521 | MS.gene018517:CDS | 40.0% | |
| CTACACTGTAAAGGTTGTGA+AGG | - | chr7.4:9809537-9809556 | MS.gene018517:intron | 40.0% | |
| GATTTGCATACCTTGCATTC+TGG | + | chr7.4:9809583-9809602 | None:intergenic | 40.0% | |
| GGAGGAGTGATTAAATCAGA+AGG | + | chr7.4:9809168-9809187 | None:intergenic | 40.0% | |
| GGAGTGATTAAATCAGAAGG+TGG | + | chr7.4:9809165-9809184 | None:intergenic | 40.0% | |
| GTTAAGACATATGGCTGTTG+AGG | + | chr7.4:9808773-9808792 | None:intergenic | 40.0% | |
| GTTGCTTCATCAATTGGATC+TGG | - | chr7.4:9810551-9810570 | MS.gene018517:CDS | 40.0% | |
| TGTAACTCCATTGAGCGTAA+TGG | - | chr7.4:9810487-9810506 | MS.gene018517:CDS | 40.0% | |
| ! | GCATTGGTAATTAAATGGGC+AGG | - | chr7.4:9810410-9810429 | MS.gene018517:CDS | 40.0% |
| ! | GTTGCAGATTGTGGTGTTAA+GGG | - | chr7.4:9809509-9809528 | MS.gene018517:intron | 40.0% |
| ! | TCTCTTGCTGGAGTTCTTTT+TGG | + | chr7.4:9808892-9808911 | None:intergenic | 40.0% |
| ! | TGTTGCAGATTGTGGTGTTA+AGG | - | chr7.4:9809508-9809527 | MS.gene018517:intron | 40.0% |
| !! | AACTCTAAGACATGTCTTGC+AGG | + | chr7.4:9810182-9810201 | None:intergenic | 40.0% |
| !! | AGTTTAAGGTTGATGGGTGA+AGG | + | chr7.4:9808946-9808965 | None:intergenic | 40.0% |
| !!! | CCCTGTTTTGGGTTTAACTA+AGG | - | chr7.4:9809248-9809267 | MS.gene018517:intron | 40.0% |
| AAGGTTGTGAAGGGAAGGTT+AGG | - | chr7.4:9809547-9809566 | MS.gene018517:intron | 45.0% | |
| ATGCTTGCCATTACGCTCAA+TGG | + | chr7.4:9810497-9810516 | None:intergenic | 45.0% | |
| CATAGACTTTGCAGCCAAGA+AGG | - | chr7.4:9810448-9810467 | MS.gene018517:CDS | 45.0% | |
| CTGTAAAGGTTGTGAAGGGA+AGG | - | chr7.4:9809542-9809561 | MS.gene018517:intron | 45.0% | |
| GAATGTGTACTCAAGCTCCT+CGG | - | chr7.4:9809427-9809446 | MS.gene018517:intron | 45.0% | |
| GAGAGAGAGAGATACTAACC+TGG | + | chr7.4:9809377-9809396 | None:intergenic | 45.0% | |
| GCCAAGAAGGTTACAGTAGT+TGG | - | chr7.4:9810461-9810480 | MS.gene018517:CDS | 45.0% | |
| GGCTGCAAAGTCTATGTTGA+AGG | + | chr7.4:9810444-9810463 | None:intergenic | 45.0% | |
| GGTGAGACAGTTTCTTTGGA+TGG | - | chr7.4:9809210-9809229 | MS.gene018517:intron | 45.0% | |
| TAACCAGTGAGGTTGGATCT+AGG | - | chr7.4:9810055-9810074 | MS.gene018517:CDS | 45.0% | |
| TGATCCATAACCAGTGAGGT+TGG | - | chr7.4:9810048-9810067 | MS.gene018517:CDS | 45.0% | |
| ! | AGATCCAACCTCACTGGTTA+TGG | + | chr7.4:9810055-9810074 | None:intergenic | 45.0% |
| ! | GCTTGGTGAGACAGTTTCTT+TGG | - | chr7.4:9809206-9809225 | MS.gene018517:intron | 45.0% |
| ATCTCACTGACACTGCTCCT+AGG | - | chr7.4:9808911-9808930 | MS.gene018517:intron | 50.0% | |
| GACCTGGTTATCATCAACCG+AGG | + | chr7.4:9809447-9809466 | None:intergenic | 50.0% | |
| GTGTCAGTGAGATCTCTTGC+TGG | + | chr7.4:9808904-9808923 | None:intergenic | 50.0% | |
| TCTCCTAGATCCAACCTCAC+TGG | + | chr7.4:9810061-9810080 | None:intergenic | 50.0% | |
| !! | AGGTTGATGGGTGAAGGAGA+AGG | + | chr7.4:9808940-9808959 | None:intergenic | 50.0% |
| !! | CTCCTCGGTTGATGATAACC+AGG | - | chr7.4:9809442-9809461 | MS.gene018517:intron | 50.0% |
| !! | GATCTGTGATGATGGGGTTG+TGG | + | chr7.4:9808870-9808889 | None:intergenic | 50.0% |
| GATGGGGTTGTGGCGATCAA+TGG | + | chr7.4:9808860-9808879 | None:intergenic | 55.0% | |
| GGTGAAGGAGAAGGTGACCT+AGG | + | chr7.4:9808931-9808950 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 9808736 | 9810607 | 9808736 | ID=MS.gene018517 |
| chr7.4 | mRNA | 9808736 | 9810607 | 9808736 | ID=MS.gene018517.t1;Parent=MS.gene018517 |
| chr7.4 | exon | 9809966 | 9810607 | 9809966 | ID=MS.gene018517.t1.exon1;Parent=MS.gene018517.t1 |
| chr7.4 | CDS | 9809966 | 9810607 | 9809966 | ID=cds.MS.gene018517.t1;Parent=MS.gene018517.t1 |
| chr7.4 | exon | 9809752 | 9809827 | 9809752 | ID=MS.gene018517.t1.exon2;Parent=MS.gene018517.t1 |
| chr7.4 | CDS | 9809752 | 9809827 | 9809752 | ID=cds.MS.gene018517.t1;Parent=MS.gene018517.t1 |
| chr7.4 | exon | 9808736 | 9808911 | 9808736 | ID=MS.gene018517.t1.exon3;Parent=MS.gene018517.t1 |
| chr7.4 | CDS | 9808736 | 9808911 | 9808736 | ID=cds.MS.gene018517.t1;Parent=MS.gene018517.t1 |
| Gene Sequence |
| Protein sequence |
