Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09786.t1 | XP_003625555.1 | 81.8 | 302 | 39 | 3 | 1 | 302 | 1 | 286 | 3.70E-103 | 384.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09786.t1 | Q58FZ0 | 43.6 | 287 | 114 | 8 | 1 | 282 | 1 | 244 | 2.0e-33 | 144.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09786.t1 | G7L1N2 | 81.8 | 302 | 39 | 3 | 1 | 302 | 1 | 286 | 2.7e-103 | 384.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene30857 | MS.gene09786 | PPI |
| MS.gene073830 | MS.gene09786 | PPI |
| MS.gene018517 | MS.gene09786 | PPI |
| MS.gene09786 | MS.gene073830 | PPI |
| MS.gene068551 | MS.gene09786 | PPI |
| MS.gene007484 | MS.gene09786 | PPI |
| MS.gene22481 | MS.gene09786 | PPI |
| MS.gene029909 | MS.gene09786 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09786.t1 | MTR_7g100450 | 90.066 | 302 | 14 | 3 | 1 | 302 | 1 | 286 | 5.12e-166 | 462 |
| MS.gene09786.t1 | MTR_7g100450 | 91.057 | 246 | 12 | 2 | 1 | 246 | 1 | 236 | 6.45e-132 | 375 |
| MS.gene09786.t1 | MTR_1g067560 | 54.545 | 297 | 97 | 9 | 1 | 297 | 1 | 259 | 1.93e-87 | 262 |
| MS.gene09786.t1 | MTR_4g062450 | 33.451 | 284 | 117 | 9 | 1 | 282 | 1 | 214 | 2.48e-32 | 120 |
| MS.gene09786.t1 | MTR_6g086020 | 53.125 | 64 | 30 | 0 | 219 | 282 | 65 | 128 | 5.63e-21 | 87.0 |
| MS.gene09786.t1 | MTR_8g103820 | 53.125 | 64 | 30 | 0 | 219 | 282 | 66 | 129 | 1.55e-20 | 85.9 |
| MS.gene09786.t1 | MTR_7g013660 | 40.964 | 83 | 48 | 1 | 219 | 300 | 4 | 86 | 3.99e-14 | 68.2 |
| MS.gene09786.t1 | MTR_3g117890 | 44.928 | 69 | 36 | 1 | 219 | 285 | 26 | 94 | 4.47e-11 | 60.5 |
| MS.gene09786.t1 | MTR_4g073040 | 37.209 | 86 | 52 | 1 | 206 | 289 | 15 | 100 | 4.98e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09786.t1 | AT2G37390 | 40.767 | 287 | 121 | 9 | 1 | 282 | 1 | 243 | 6.71e-53 | 174 |
| MS.gene09786.t1 | AT2G37390 | 39.721 | 287 | 125 | 8 | 1 | 282 | 1 | 244 | 7.28e-53 | 174 |
| MS.gene09786.t1 | AT3G53530 | 36.552 | 290 | 119 | 8 | 1 | 282 | 1 | 233 | 3.13e-41 | 143 |
| MS.gene09786.t1 | AT3G53530 | 36.426 | 291 | 119 | 9 | 1 | 282 | 1 | 234 | 2.38e-39 | 139 |
| MS.gene09786.t1 | AT5G02600 | 80.822 | 73 | 14 | 0 | 213 | 285 | 244 | 316 | 8.44e-36 | 131 |
| MS.gene09786.t1 | AT5G02600 | 80.822 | 73 | 14 | 0 | 213 | 285 | 244 | 316 | 8.44e-36 | 131 |
| MS.gene09786.t1 | AT2G28660 | 69.014 | 71 | 22 | 0 | 212 | 282 | 176 | 246 | 1.84e-28 | 110 |
| MS.gene09786.t1 | AT3G24450 | 48.438 | 64 | 33 | 0 | 219 | 282 | 74 | 137 | 2.12e-16 | 75.1 |
| MS.gene09786.t1 | AT1G66240 | 42.500 | 80 | 43 | 2 | 206 | 283 | 20 | 98 | 5.14e-15 | 70.1 |
| MS.gene09786.t1 | AT3G56240 | 46.970 | 66 | 34 | 1 | 219 | 283 | 3 | 68 | 9.17e-14 | 67.4 |
| MS.gene09786.t1 | AT3G56240 | 46.970 | 66 | 34 | 1 | 219 | 283 | 3 | 68 | 9.17e-14 | 67.4 |
| MS.gene09786.t1 | AT5G27690 | 40.000 | 90 | 47 | 3 | 195 | 283 | 12 | 95 | 2.74e-13 | 69.7 |
Find 48 sgRNAs with CRISPR-Local
Find 103 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAATTGATGAAGCAATTTC+TGG | 0.210661 | 7.1:-8025458 | None:intergenic |
| ATTAGATTATGACCCTGTTT+TGG | 0.240827 | 7.1:+8024205 | MS.gene09786:CDS |
| CCAGAAATTGCTTCATCAAT+TGG | 0.281856 | 7.1:+8025458 | MS.gene09786:CDS |
| GATTTGCATACCTTGCATTC+TGG | 0.322525 | 7.1:-8024500 | None:intergenic |
| ACCAACTACTGTAACCTTCT+TGG | 0.326525 | 7.1:-8025375 | None:intergenic |
| GCTTGGTGAGACAGTTTCTT+TGG | 0.328826 | 7.1:+8024175 | MS.gene09786:CDS |
| ATGGACAAGTTTAAGGTTGA+TGG | 0.338522 | 7.1:-8023919 | None:intergenic |
| AGGTGAAGACTGCACAAATT+TGG | 0.341639 | 7.1:+8025435 | MS.gene09786:CDS |
| TCTACCACCAAAGTGATTAA+TGG | 0.359645 | 7.1:-8023802 | None:intergenic |
| CTTCTTAAAATACTATCAAC+TGG | 0.402151 | 7.1:-8024095 | None:intergenic |
| GTTGCAGGTTGTGGTGTTGA+GGG | 0.402867 | 7.1:+8024429 | MS.gene09786:intron |
| ACCTTAGTTAAACCCAAAAC+AGG | 0.426654 | 7.1:-8024218 | None:intergenic |
| AAGGTTGTGAAGGGAAGGTT+AGG | 0.448311 | 7.1:+8024467 | MS.gene09786:CDS |
| ATGATTAGTGTTAAGACATA+TGG | 0.448878 | 7.1:-8023733 | None:intergenic |
| ATGCTTGCCATTACGCTCAA+TGG | 0.459884 | 7.1:-8025407 | None:intergenic |
| GCCAAGAAGGTTACAGTAGT+TGG | 0.460899 | 7.1:+8025374 | MS.gene09786:CDS |
| TCCAACACCATTAATCACTT+TGG | 0.465049 | 7.1:+8023795 | MS.gene09786:CDS |
| ATTGCTTCATCAATTGGATC+TGG | 0.465434 | 7.1:+8025464 | MS.gene09786:CDS |
| AGGGTTTCTCTGCACTGTAA+AGG | 0.473410 | 7.1:+8024448 | MS.gene09786:CDS |
| GGCTGCAAAGTCTATGTTGA+AGG | 0.474842 | 7.1:-8025354 | None:intergenic |
| GTGACAGTGAGATCTCTTGC+TGG | 0.476149 | 7.1:-8023870 | None:intergenic |
| GGTGAGACAGTTTCTTTGGA+TGG | 0.476989 | 7.1:+8024179 | MS.gene09786:CDS |
| TGTTGCAGGTTGTGGTGTTG+AGG | 0.477204 | 7.1:+8024428 | MS.gene09786:intron |
| CATAGACTTTGCAGCCAAGA+AGG | 0.492938 | 7.1:+8025361 | MS.gene09786:CDS |
| TGGACAAGTTTAAGGTTGAT+GGG | 0.502719 | 7.1:-8023918 | None:intergenic |
| ACTTCATCAAGATATTTGCT+TGG | 0.504136 | 7.1:+8024158 | MS.gene09786:CDS |
| TGGTTTGTAGAACTAGACTT+AGG | 0.515856 | 7.1:-8024323 | None:intergenic |
| AACACCATTAATCACTTTGG+TGG | 0.517962 | 7.1:+8023798 | MS.gene09786:CDS |
| ACCAAAGTGATTAATGGTGT+TGG | 0.523108 | 7.1:-8023796 | None:intergenic |
| GATCTGTGATTATGGGGTTG+TGG | 0.526586 | 7.1:-8023836 | None:intergenic |
| GGTGAAGGAGAAGGTGAACT+AGG | 0.527463 | 7.1:-8023897 | None:intergenic |
| GGAGGAGTGATTAAATCAGA+AGG | 0.533878 | 7.1:-8024134 | None:intergenic |
| TATGGGGTTGTGGCGATCAA+TGG | 0.543005 | 7.1:-8023826 | None:intergenic |
| AGTTTAAGGTTGATGGGTGA+AGG | 0.543572 | 7.1:-8023912 | None:intergenic |
| GTTAAGACATATGGCTGTTG+AGG | 0.547442 | 7.1:-8023724 | None:intergenic |
| AGCAAATATCTTGATGAAGT+AGG | 0.555945 | 7.1:-8024155 | None:intergenic |
| TGTAACTCCATTGAGCGTAA+TGG | 0.561591 | 7.1:+8025400 | MS.gene09786:CDS |
| CTGTAAAGGTTGTGAAGGGA+AGG | 0.564948 | 7.1:+8024462 | MS.gene09786:CDS |
| CTGCACTGTAAAGGTTGTGA+AGG | 0.566829 | 7.1:+8024457 | MS.gene09786:CDS |
| AGGTTGATGGGTGAAGGAGA+AGG | 0.573141 | 7.1:-8023906 | None:intergenic |
| AAACATCTCTCCAGAATGCA+AGG | 0.579496 | 7.1:+8024490 | MS.gene09786:CDS |
| CGTAATGGCAAGCATATCAA+AGG | 0.592668 | 7.1:+8025415 | MS.gene09786:CDS |
| TAAGTCTAGTTCTACAAACC+AGG | 0.593714 | 7.1:+8024325 | MS.gene09786:CDS |
| AAATATCTTGATGAAGTAGG+AGG | 0.614620 | 7.1:-8024152 | None:intergenic |
| TGCACTGTAAAGGTTGTGAA+GGG | 0.619418 | 7.1:+8024458 | MS.gene09786:CDS |
| AGAACTAGACTTAGGAACAG+AGG | 0.649153 | 7.1:-8024315 | None:intergenic |
| CCTTAGTTAAACCCAAAACA+GGG | 0.664376 | 7.1:-8024217 | None:intergenic |
| GGAGTGATTAAATCAGAAGG+TGG | 0.685023 | 7.1:-8024131 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAATTTAATCTTTAGTT+GGG | - | chr7.1:8025020-8025039 | None:intergenic | 15.0% |
| !! | AGGTTATATATGAATATTAT+TGG | + | chr7.1:8024723-8024742 | MS.gene09786:intron | 15.0% |
| !! | TACAAAATTTAATCTTTAGT+TGG | - | chr7.1:8025021-8025040 | None:intergenic | 15.0% |
| !! | TTTCACATATAAGAAAAATA+AGG | + | chr7.1:8024703-8024722 | MS.gene09786:intron | 15.0% |
| !!! | ACTAAAGATTAAATTTTGTA+TGG | + | chr7.1:8025021-8025040 | MS.gene09786:intron | 15.0% |
| !!! | TTAAGATACATTCTTTTAAA+TGG | - | chr7.1:8024823-8024842 | None:intergenic | 15.0% |
| !! | AAATGAAATAACCATGTTTA+TGG | + | chr7.1:8025248-8025267 | MS.gene09786:intron | 20.0% |
| !! | ACAAAAAAATAACGTTTAGA+AGG | - | chr7.1:8024674-8024693 | None:intergenic | 20.0% |
| !! | TATTTAATATCAAACACAAG+TGG | + | chr7.1:8025055-8025074 | MS.gene09786:intron | 20.0% |
| !!! | ATAGTATTTTAAGAAGAAGT+AGG | + | chr7.1:8024102-8024121 | MS.gene09786:CDS | 20.0% |
| !!! | CTTTACAAACTAATTTTGTA+AGG | - | chr7.1:8025137-8025156 | None:intergenic | 20.0% |
| !!! | TAGTATTTTAAGAAGAAGTA+GGG | + | chr7.1:8024103-8024122 | MS.gene09786:CDS | 20.0% |
| !!! | TATCGTTATTATTTTGTTGA+GGG | - | chr7.1:8024790-8024809 | None:intergenic | 20.0% |
| !!! | TTCAATATTTCTTTTTGCAT+TGG | + | chr7.1:8025307-8025326 | MS.gene09786:intron | 20.0% |
| !!! | TTTTACAGAATCTTAATAAC+TGG | - | chr7.1:8024594-8024613 | None:intergenic | 20.0% |
| !!! | TTTTGCATTGGTAATTAAAT+GGG | + | chr7.1:8025319-8025338 | MS.gene09786:intron | 20.0% |
| !!! | TTTTTGCATTGGTAATTAAA+TGG | + | chr7.1:8025318-8025337 | MS.gene09786:intron | 20.0% |
| ! | AAAAAATAACGTTTAGAAGG+TGG | - | chr7.1:8024671-8024690 | None:intergenic | 25.0% |
| ! | AATATGACCTATTTAGTAGT+GGG | - | chr7.1:8025171-8025190 | None:intergenic | 25.0% |
| ! | ATGATTAGTGTTAAGACATA+TGG | - | chr7.1:8023736-8023755 | None:intergenic | 25.0% |
| ! | CTTCTTAAAATACTATCAAC+TGG | - | chr7.1:8024098-8024117 | None:intergenic | 25.0% |
| ! | TTTCATTTCGAAAAATCGAT+CGG | - | chr7.1:8025236-8025255 | None:intergenic | 25.0% |
| ! | TTTGAATCCATGTAAAAACA+TGG | - | chr7.1:8025198-8025217 | None:intergenic | 25.0% |
| !! | GATTAAATTTTGTATGGAGA+TGG | + | chr7.1:8025027-8025046 | MS.gene09786:intron | 25.0% |
| !! | TTTTGAATGAATTTTGTTGC+AGG | + | chr7.1:8024414-8024433 | MS.gene09786:intron | 25.0% |
| !!! | ATTCTATCCATGTTTTTACA+TGG | + | chr7.1:8025188-8025207 | MS.gene09786:intron | 25.0% |
| !!! | GTATCGTTATTATTTTGTTG+AGG | - | chr7.1:8024791-8024810 | None:intergenic | 25.0% |
| AAATATCTTGATGAAGTAGG+AGG | - | chr7.1:8024155-8024174 | None:intergenic | 30.0% | |
| AATTACTCCCACTACTAAAT+AGG | + | chr7.1:8025161-8025180 | MS.gene09786:intron | 30.0% | |
| ACTTCATCAAGATATTTGCT+TGG | + | chr7.1:8024158-8024177 | MS.gene09786:CDS | 30.0% | |
| AGCAAATATCTTGATGAAGT+AGG | - | chr7.1:8024158-8024177 | None:intergenic | 30.0% | |
| ATAAAACGCTACCATAAACA+TGG | - | chr7.1:8025262-8025281 | None:intergenic | 30.0% | |
| CTTCAATACCATTTGATTGA+TGG | - | chr7.1:8024555-8024574 | None:intergenic | 30.0% | |
| GAATATGACCTATTTAGTAG+TGG | - | chr7.1:8025172-8025191 | None:intergenic | 30.0% | |
| GTTATAGACTTATAGTAGCT+AGG | - | chr7.1:8024649-8024668 | None:intergenic | 30.0% | |
| TTTAACGAGGCTTATATCAA+AGG | + | chr7.1:8024901-8024920 | MS.gene09786:intron | 30.0% | |
| ! | ATTAGATTATGACCCTGTTT+TGG | + | chr7.1:8024205-8024224 | MS.gene09786:CDS | 30.0% |
| ! | CTTTTTGGATCTGTGATTAT+GGG | - | chr7.1:8023846-8023865 | None:intergenic | 30.0% |
| ! | TCTTTTTGGATCTGTGATTA+TGG | - | chr7.1:8023847-8023866 | None:intergenic | 30.0% |
| ! | TTAGATTATGACCCTGTTTT+GGG | + | chr7.1:8024206-8024225 | MS.gene09786:CDS | 30.0% |
| ! | TTTTTGGATCTGTGATTATG+GGG | - | chr7.1:8023845-8023864 | None:intergenic | 30.0% |
| !! | CTTTTTCATGGACAAGTTTA+AGG | - | chr7.1:8023929-8023948 | None:intergenic | 30.0% |
| !! | TCTAGACAATGTTTTTAACG+AGG | + | chr7.1:8024888-8024907 | MS.gene09786:intron | 30.0% |
| !! | TGTGTTGTTTGTTTCATGTT+TGG | + | chr7.1:8024385-8024404 | MS.gene09786:intron | 30.0% |
| !!! | TGTTTTTCTTGGCTTTTTCA+TGG | - | chr7.1:8023941-8023960 | None:intergenic | 30.0% |
| AACACCATTAATCACTTTGG+TGG | + | chr7.1:8023798-8023817 | MS.gene09786:CDS | 35.0% | |
| ACCAAAGTGATTAATGGTGT+TGG | - | chr7.1:8023799-8023818 | None:intergenic | 35.0% | |
| ACCTTAGTTAAACCCAAAAC+AGG | - | chr7.1:8024221-8024240 | None:intergenic | 35.0% | |
| AGGCTTATATCAAAGGACAA+AGG | + | chr7.1:8024908-8024927 | MS.gene09786:intron | 35.0% | |
| ATAATGATCCATAACCAGTG+AGG | + | chr7.1:8024957-8024976 | MS.gene09786:intron | 35.0% | |
| ATTGCTTCATCAATTGGATC+TGG | + | chr7.1:8025464-8025483 | MS.gene09786:CDS | 35.0% | |
| CCAATTGATGAAGCAATTTC+TGG | - | chr7.1:8025461-8025480 | None:intergenic | 35.0% | |
| CCAGAAATTGCTTCATCAAT+TGG | + | chr7.1:8025458-8025477 | MS.gene09786:CDS | 35.0% | |
| CCTTAGTTAAACCCAAAACA+GGG | - | chr7.1:8024220-8024239 | None:intergenic | 35.0% | |
| TCCAACACCATTAATCACTT+TGG | + | chr7.1:8023795-8023814 | MS.gene09786:CDS | 35.0% | |
| TCTACCACCAAAGTGATTAA+TGG | - | chr7.1:8023805-8023824 | None:intergenic | 35.0% | |
| TGATCAGACCATCAATCAAA+TGG | + | chr7.1:8024544-8024563 | MS.gene09786:intron | 35.0% | |
| ! | ATGAATTTTGTTGCAGGTTG+TGG | + | chr7.1:8024420-8024439 | MS.gene09786:intron | 35.0% |
| ! | ATGGACAAGTTTAAGGTTGA+TGG | - | chr7.1:8023922-8023941 | None:intergenic | 35.0% |
| ! | ATTGGTAATTAAATGGGCAG+GGG | + | chr7.1:8025325-8025344 | MS.gene09786:intron | 35.0% |
| ! | CATTGGTAATTAAATGGGCA+GGG | + | chr7.1:8025324-8025343 | MS.gene09786:intron | 35.0% |
| ! | TGGACAAGTTTAAGGTTGAT+GGG | - | chr7.1:8023921-8023940 | None:intergenic | 35.0% |
| ! | TGGTTTGTAGAACTAGACTT+AGG | - | chr7.1:8024326-8024345 | None:intergenic | 35.0% |
| !! | TAAGTCTAGTTCTACAAACC+AGG | + | chr7.1:8024325-8024344 | MS.gene09786:CDS | 35.0% |
| !!! | CTTTGAAGCAGTGTTTTTCT+TGG | - | chr7.1:8023952-8023971 | None:intergenic | 35.0% |
| AAACATCTCTCCAGAATGCA+AGG | + | chr7.1:8024490-8024509 | MS.gene09786:CDS | 40.0% | |
| ACCAACTACTGTAACCTTCT+TGG | - | chr7.1:8025378-8025397 | None:intergenic | 40.0% | |
| AGAACTAGACTTAGGAACAG+AGG | - | chr7.1:8024318-8024337 | None:intergenic | 40.0% | |
| AGGTGAAGACTGCACAAATT+TGG | + | chr7.1:8025435-8025454 | MS.gene09786:CDS | 40.0% | |
| CGTAATGGCAAGCATATCAA+AGG | + | chr7.1:8025415-8025434 | MS.gene09786:CDS | 40.0% | |
| GAGAGAAAGAGATACTAACC+TGG | - | chr7.1:8024346-8024365 | None:intergenic | 40.0% | |
| GATTTGCATACCTTGCATTC+TGG | - | chr7.1:8024503-8024522 | None:intergenic | 40.0% | |
| GGAGGAGTGATTAAATCAGA+AGG | - | chr7.1:8024137-8024156 | None:intergenic | 40.0% | |
| GGAGTGATTAAATCAGAAGG+TGG | - | chr7.1:8024134-8024153 | None:intergenic | 40.0% | |
| GTTAAGACATATGGCTGTTG+AGG | - | chr7.1:8023727-8023746 | None:intergenic | 40.0% | |
| TGCACTGTAAAGGTTGTGAA+GGG | + | chr7.1:8024458-8024477 | MS.gene09786:CDS | 40.0% | |
| TGTAACTCCATTGAGCGTAA+TGG | + | chr7.1:8025400-8025419 | MS.gene09786:CDS | 40.0% | |
| ! | GCATTGGTAATTAAATGGGC+AGG | + | chr7.1:8025323-8025342 | MS.gene09786:intron | 40.0% |
| ! | TCTCTTGCTGGAGTTCTTTT+TGG | - | chr7.1:8023861-8023880 | None:intergenic | 40.0% |
| !! | AACTCTAAGACATGTCTTGC+AGG | - | chr7.1:8025095-8025114 | None:intergenic | 40.0% |
| !! | AGTTTAAGGTTGATGGGTGA+AGG | - | chr7.1:8023915-8023934 | None:intergenic | 40.0% |
| !!! | CCCTGTTTTGGGTTTAACTA+AGG | + | chr7.1:8024217-8024236 | MS.gene09786:CDS | 40.0% |
| AAGGTTGTGAAGGGAAGGTT+AGG | + | chr7.1:8024467-8024486 | MS.gene09786:CDS | 45.0% | |
| AGGGTTTCTCTGCACTGTAA+AGG | + | chr7.1:8024448-8024467 | MS.gene09786:CDS | 45.0% | |
| ATGCTTGCCATTACGCTCAA+TGG | - | chr7.1:8025410-8025429 | None:intergenic | 45.0% | |
| CATAGACTTTGCAGCCAAGA+AGG | + | chr7.1:8025361-8025380 | MS.gene09786:CDS | 45.0% | |
| CTGCACTGTAAAGGTTGTGA+AGG | + | chr7.1:8024457-8024476 | MS.gene09786:CDS | 45.0% | |
| CTGTAAAGGTTGTGAAGGGA+AGG | + | chr7.1:8024462-8024481 | MS.gene09786:CDS | 45.0% | |
| GATCTGTGATTATGGGGTTG+TGG | - | chr7.1:8023839-8023858 | None:intergenic | 45.0% | |
| GCCAAGAAGGTTACAGTAGT+TGG | + | chr7.1:8025374-8025393 | MS.gene09786:CDS | 45.0% | |
| GGCTGCAAAGTCTATGTTGA+AGG | - | chr7.1:8025357-8025376 | None:intergenic | 45.0% | |
| GGTGAGACAGTTTCTTTGGA+TGG | + | chr7.1:8024179-8024198 | MS.gene09786:CDS | 45.0% | |
| TAACCAGTGAGGTTGGATCT+AGG | + | chr7.1:8024968-8024987 | MS.gene09786:intron | 45.0% | |
| TGATCCATAACCAGTGAGGT+TGG | + | chr7.1:8024961-8024980 | MS.gene09786:intron | 45.0% | |
| ! | AGATCCAACCTCACTGGTTA+TGG | - | chr7.1:8024968-8024987 | None:intergenic | 45.0% |
| ! | GCTTGGTGAGACAGTTTCTT+TGG | + | chr7.1:8024175-8024194 | MS.gene09786:CDS | 45.0% |
| GGTGAAGGAGAAGGTGAACT+AGG | - | chr7.1:8023900-8023919 | None:intergenic | 50.0% | |
| GTGACAGTGAGATCTCTTGC+TGG | - | chr7.1:8023873-8023892 | None:intergenic | 50.0% | |
| TATGGGGTTGTGGCGATCAA+TGG | - | chr7.1:8023829-8023848 | None:intergenic | 50.0% | |
| TCTCCTAGATCCAACCTCAC+TGG | - | chr7.1:8024974-8024993 | None:intergenic | 50.0% | |
| ! | GTTGCAGGTTGTGGTGTTGA+GGG | + | chr7.1:8024429-8024448 | MS.gene09786:intron | 50.0% |
| ! | TGTTGCAGGTTGTGGTGTTG+AGG | + | chr7.1:8024428-8024447 | MS.gene09786:intron | 50.0% |
| !! | AGGTTGATGGGTGAAGGAGA+AGG | - | chr7.1:8023909-8023928 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 8023690 | 8025520 | 8023690 | ID=MS.gene09786 |
| chr7.1 | mRNA | 8023690 | 8025520 | 8023690 | ID=MS.gene09786.t1;Parent=MS.gene09786 |
| chr7.1 | exon | 8023690 | 8024346 | 8023690 | ID=MS.gene09786.t1.exon1;Parent=MS.gene09786.t1 |
| chr7.1 | CDS | 8023690 | 8024346 | 8023690 | ID=cds.MS.gene09786.t1;Parent=MS.gene09786.t1 |
| chr7.1 | exon | 8024436 | 8024511 | 8024436 | ID=MS.gene09786.t1.exon2;Parent=MS.gene09786.t1 |
| chr7.1 | CDS | 8024436 | 8024511 | 8024436 | ID=cds.MS.gene09786.t1;Parent=MS.gene09786.t1 |
| chr7.1 | exon | 8025345 | 8025520 | 8025345 | ID=MS.gene09786.t1.exon3;Parent=MS.gene09786.t1 |
| chr7.1 | CDS | 8025345 | 8025520 | 8025345 | ID=cds.MS.gene09786.t1;Parent=MS.gene09786.t1 |
| Gene Sequence |
| Protein sequence |
