Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068551.t1 | XP_013468300.1 | 91.6 | 261 | 20 | 1 | 1 | 259 | 1 | 261 | 2.30E-122 | 448.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068551.t1 | Q58FZ0 | 41.4 | 266 | 129 | 10 | 6 | 257 | 5 | 257 | 1.7e-33 | 144.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068551.t1 | A0A072VKM1 | 91.6 | 261 | 20 | 1 | 1 | 259 | 1 | 261 | 1.7e-122 | 448.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene029909 | MS.gene068551 | PPI |
MS.gene30857 | MS.gene068551 | PPI |
MS.gene018517 | MS.gene068551 | PPI |
MS.gene068551 | MS.gene09786 | PPI |
MS.gene068551 | MS.gene073830 | PPI |
MS.gene007484 | MS.gene068551 | PPI |
MS.gene22481 | MS.gene068551 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068551.t1 | MTR_1g067560 | 95.019 | 261 | 11 | 1 | 1 | 259 | 1 | 261 | 9.80e-175 | 481 |
MS.gene068551.t1 | MTR_7g100450 | 57.875 | 273 | 89 | 8 | 1 | 247 | 1 | 273 | 1.03e-85 | 257 |
MS.gene068551.t1 | MTR_7g100450 | 52.966 | 236 | 85 | 8 | 1 | 210 | 1 | 236 | 4.84e-59 | 187 |
MS.gene068551.t1 | MTR_4g062450 | 39.216 | 255 | 105 | 9 | 1 | 246 | 1 | 214 | 2.63e-41 | 142 |
MS.gene068551.t1 | MTR_6g086020 | 56.250 | 64 | 28 | 0 | 183 | 246 | 65 | 128 | 7.45e-23 | 91.3 |
MS.gene068551.t1 | MTR_8g103820 | 56.250 | 64 | 28 | 0 | 183 | 246 | 66 | 129 | 1.67e-22 | 90.1 |
MS.gene068551.t1 | MTR_7g013660 | 44.776 | 67 | 36 | 1 | 181 | 246 | 2 | 68 | 2.24e-14 | 68.6 |
MS.gene068551.t1 | MTR_1g092670 | 42.029 | 69 | 39 | 1 | 181 | 248 | 2 | 70 | 6.72e-13 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068551.t1 | AT2G37390 | 42.857 | 252 | 120 | 9 | 6 | 246 | 5 | 243 | 4.75e-51 | 167 |
MS.gene068551.t1 | AT2G37390 | 42.292 | 253 | 121 | 9 | 6 | 246 | 5 | 244 | 1.19e-49 | 164 |
MS.gene068551.t1 | AT3G53530 | 41.569 | 255 | 118 | 9 | 1 | 246 | 1 | 233 | 2.54e-46 | 155 |
MS.gene068551.t1 | AT3G53530 | 41.406 | 256 | 118 | 10 | 1 | 246 | 1 | 234 | 1.64e-44 | 150 |
MS.gene068551.t1 | AT5G02600 | 78.082 | 73 | 16 | 0 | 177 | 249 | 244 | 316 | 5.42e-35 | 128 |
MS.gene068551.t1 | AT5G02600 | 78.082 | 73 | 16 | 0 | 177 | 249 | 244 | 316 | 5.42e-35 | 128 |
MS.gene068551.t1 | AT2G28660 | 73.438 | 64 | 17 | 0 | 183 | 246 | 183 | 246 | 4.49e-27 | 105 |
MS.gene068551.t1 | AT3G24450 | 51.562 | 64 | 31 | 0 | 183 | 246 | 74 | 137 | 9.69e-18 | 77.8 |
MS.gene068551.t1 | AT1G66240 | 43.038 | 79 | 44 | 1 | 177 | 254 | 27 | 105 | 4.60e-16 | 72.4 |
MS.gene068551.t1 | AT3G56240 | 43.284 | 67 | 37 | 1 | 182 | 247 | 2 | 68 | 2.72e-14 | 68.2 |
MS.gene068551.t1 | AT3G56240 | 43.284 | 67 | 37 | 1 | 182 | 247 | 2 | 68 | 2.72e-14 | 68.2 |
MS.gene068551.t1 | AT5G27690 | 46.032 | 63 | 33 | 1 | 186 | 247 | 33 | 95 | 1.83e-12 | 66.6 |
Find 51 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCTTGAATCATTGATAAT+AGG | 0.154536 | 1.2:-50966261 | None:intergenic |
TCCTCCTAATTAGATGAATT+TGG | 0.164221 | 1.2:-50967482 | None:intergenic |
TTAGATGAATTTGGTTTCTT+TGG | 0.205681 | 1.2:-50967473 | None:intergenic |
TTCTTGAATCATTGATAATA+GGG | 0.260643 | 1.2:-50966260 | None:intergenic |
GGAGTAATTGAGTCAGAATT+TGG | 0.263951 | 1.2:-50966501 | None:intergenic |
ATGCTTGCCAATACACTAAA+TGG | 0.274222 | 1.2:-50967403 | None:intergenic |
AGGTGAAGAATGCACAATTT+TGG | 0.279496 | 1.2:+50967431 | MS.gene068551:CDS |
AACTAAGGTTGATGATAAAA+AGG | 0.295490 | 1.2:+50966602 | MS.gene068551:CDS |
ATCCAACCCTGCATCTAAAT+CGG | 0.376694 | 1.2:+50966647 | MS.gene068551:CDS |
TTCCATTCTGAAAAGGAGAT+TGG | 0.404756 | 1.2:+50966473 | MS.gene068551:CDS |
TCTTCTTCTTCCAAGCCAAT+TGG | 0.409571 | 1.2:+50966357 | MS.gene068551:CDS |
GCAAAGAAGGTGACAATAGT+TGG | 0.411060 | 1.2:+50967370 | MS.gene068551:CDS |
TTCTGTCTTGGCATTAACTA+AGG | 0.413181 | 1.2:+50966587 | MS.gene068551:CDS |
TGTGACTCCATTTAGTGTAT+TGG | 0.414736 | 1.2:+50967396 | MS.gene068551:CDS |
CATGTTCTGTCCAATTGGCT+TGG | 0.427254 | 1.2:-50966367 | None:intergenic |
TTGAGCAGGTTGTAGTATTG+AGG | 0.431624 | 1.2:+50967038 | MS.gene068551:intron |
CAAAGAAGGTGACAATAGTT+GGG | 0.432731 | 1.2:+50967371 | MS.gene068551:CDS |
TTCGAATTATGATTCTGTCT+TGG | 0.443038 | 1.2:+50966575 | MS.gene068551:CDS |
TGCAGCAAAATCTATGTTGA+AGG | 0.445020 | 1.2:-50967350 | None:intergenic |
GACTTTGCCTCCAAGTTGAA+TGG | 0.449627 | 1.2:-50966223 | None:intergenic |
TGAGCAGGTTGTAGTATTGA+GGG | 0.452176 | 1.2:+50967039 | MS.gene068551:intron |
GAGGAACCCGATTTAGATGC+AGG | 0.453934 | 1.2:-50966654 | None:intergenic |
GGGTTTCTTTGCATTGCAAA+GGG | 0.475577 | 1.2:+50967059 | MS.gene068551:CDS |
TCAAATACCATTCAACTTGG+AGG | 0.476391 | 1.2:+50966216 | MS.gene068551:CDS |
TCCAACCCTGCATCTAAATC+GGG | 0.488661 | 1.2:+50966648 | MS.gene068551:CDS |
CAATTGATTCCATTCTGAAA+AGG | 0.489678 | 1.2:+50966466 | MS.gene068551:CDS |
AATCATTGATAATAGGGTTG+TGG | 0.501645 | 1.2:-50966254 | None:intergenic |
ACAAGGAGCAGTGATAGTCT+TGG | 0.502397 | 1.2:-50966292 | None:intergenic |
TCTTCAAATACCATTCAACT+TGG | 0.505844 | 1.2:+50966213 | MS.gene068551:CDS |
AGGGTTTCTTTGCATTGCAA+AGG | 0.507191 | 1.2:+50967058 | MS.gene068551:CDS |
TATCCAAAAGATGAAAAGAA+TGG | 0.508564 | 1.2:+50966125 | None:intergenic |
ACCCGATTTAGATGCAGGGT+TGG | 0.510035 | 1.2:-50966649 | None:intergenic |
TTGGTGTCAGATCCAAGTGC+TGG | 0.516428 | 1.2:-50967454 | None:intergenic |
TGCATTGCAAAGGGTGTGAA+GGG | 0.518392 | 1.2:+50967068 | MS.gene068551:CDS |
TTGCATTGCAAAGGGTGTGA+AGG | 0.536259 | 1.2:+50967067 | MS.gene068551:CDS |
GCTAAGACATATTGCTGTTG+AGG | 0.541448 | 1.2:-50966169 | None:intergenic |
TGGCTTGGAAGAAGAAGAAG+TGG | 0.558993 | 1.2:-50966352 | None:intergenic |
AACAGCAATATGTCTTAGCA+TGG | 0.568544 | 1.2:+50966173 | MS.gene068551:CDS |
TAAATCGGGTTCCTCAAGCC+AGG | 0.574328 | 1.2:+50966662 | MS.gene068551:CDS |
AGGAACCCGATTTAGATGCA+GGG | 0.591898 | 1.2:-50966653 | None:intergenic |
AAACACATCTCTAAAATGCA+AGG | 0.597452 | 1.2:+50967100 | MS.gene068551:CDS |
TGTATTGGCAAGCATATCAA+AGG | 0.601005 | 1.2:+50967411 | MS.gene068551:CDS |
TGGCTTAGAAGAGTAACTGT+TGG | 0.609262 | 1.2:-50966445 | None:intergenic |
AGCAAAATCTATGTTGAAGG+AGG | 0.618997 | 1.2:-50967347 | None:intergenic |
GGTAGCTGAGAAGAAGAACA+AGG | 0.627415 | 1.2:-50966309 | None:intergenic |
TCTGACTCAATTACTCCACA+TGG | 0.643353 | 1.2:+50966507 | MS.gene068551:CDS |
AAGAAAACTAACCTGGCTTG+AGG | 0.646869 | 1.2:-50966673 | None:intergenic |
AAGGGTGTGAAGGGAAGCTG+AGG | 0.652756 | 1.2:+50967077 | MS.gene068551:CDS |
AAAGAAGGTGACAATAGTTG+GGG | 0.656060 | 1.2:+50967372 | MS.gene068551:CDS |
GCAAAAGAAGAAAAGTACAG+TGG | 0.667428 | 1.2:+50966413 | MS.gene068551:CDS |
AAAGATCTAGTTGAACCATG+TGG | 0.741520 | 1.2:-50966522 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAAATACATTTTTTAAATGT+GGG | - | chr1.2:50967140-50967159 | None:intergenic | 10.0% |
!!! | TTAAATACATTTTTTAAATG+TGG | - | chr1.2:50967141-50967160 | None:intergenic | 10.0% |
!! | AGTTAAAGATTATTTAAAGA+TGG | - | chr1.2:50967227-50967246 | None:intergenic | 15.0% |
!!! | AAATACATTTTTTAAATGTG+GGG | - | chr1.2:50967139-50967158 | None:intergenic | 15.0% |
!!! | TTTAATCTTGTTGATTTTAT+GGG | + | chr1.2:50967315-50967334 | MS.gene068551:intron | 15.0% |
!!! | TTTTAATCTTGTTGATTTTA+TGG | + | chr1.2:50967314-50967333 | MS.gene068551:intron | 15.0% |
!! | AAAATTCATAAAACTAGTCA+TGG | - | chr1.2:50966992-50967011 | None:intergenic | 20.0% |
!! | TAAATGCAGAAAATTAAGAT+TGG | - | chr1.2:50966879-50966898 | None:intergenic | 20.0% |
!!! | TTATTTTTTGCCACTTATTT+AGG | + | chr1.2:50966848-50966867 | MS.gene068551:intron | 20.0% |
!!! | TTCTTGAATCATTGATAATA+GGG | - | chr1.2:50966263-50966282 | None:intergenic | 20.0% |
! | ACATTCTCTCAAATTATTAC+CGG | + | chr1.2:50966775-50966794 | MS.gene068551:intron | 25.0% |
! | ATTGGAAAATCCTAAATAAG+TGG | - | chr1.2:50966861-50966880 | None:intergenic | 25.0% |
! | ATTTGAGTAAATATTTGAGC+AGG | + | chr1.2:50967024-50967043 | MS.gene068551:intron | 25.0% |
! | TCTCATATTTGAATTCCATT+CGG | - | chr1.2:50967294-50967313 | None:intergenic | 25.0% |
!! | CTTCTTGAATCATTGATAAT+AGG | - | chr1.2:50966264-50966283 | None:intergenic | 25.0% |
!! | TTAGATGAATTTGGTTTCTT+TGG | - | chr1.2:50967476-50967495 | None:intergenic | 25.0% |
!!! | AACTAAGGTTGATGATAAAA+AGG | + | chr1.2:50966602-50966621 | MS.gene068551:CDS | 25.0% |
ATTGGACAGAACATGAAAAA+TGG | + | chr1.2:50966375-50966394 | MS.gene068551:CDS | 30.0% | |
GAATATGAACTAAGCAAGTT+TGG | + | chr1.2:50966945-50966964 | MS.gene068551:intron | 30.0% | |
GTGGCAAAAAATAAAACCTA+TGG | - | chr1.2:50966842-50966861 | None:intergenic | 30.0% | |
TCTTCAAATACCATTCAACT+TGG | + | chr1.2:50966213-50966232 | MS.gene068551:CDS | 30.0% | |
TTCGAATTATGATTCTGTCT+TGG | + | chr1.2:50966575-50966594 | MS.gene068551:CDS | 30.0% | |
! | AATCATTGATAATAGGGTTG+TGG | - | chr1.2:50966257-50966276 | None:intergenic | 30.0% |
! | CAATTGATTCCATTCTGAAA+AGG | + | chr1.2:50966466-50966485 | MS.gene068551:CDS | 30.0% |
! | CTTTTCAGAATGGAATCAAT+TGG | - | chr1.2:50966468-50966487 | None:intergenic | 30.0% |
! | GATAAAAAGGATCAAGTTGT+TGG | + | chr1.2:50966615-50966634 | MS.gene068551:CDS | 30.0% |
! | TTTTTCATGTTCTGTCCAAT+TGG | - | chr1.2:50966375-50966394 | None:intergenic | 30.0% |
!! | AAACACATCTCTAAAATGCA+AGG | + | chr1.2:50967100-50967119 | MS.gene068551:CDS | 30.0% |
AAAGAAGGTGACAATAGTTG+GGG | + | chr1.2:50967372-50967391 | MS.gene068551:CDS | 35.0% | |
AAAGATCTAGTTGAACCATG+TGG | - | chr1.2:50966525-50966544 | None:intergenic | 35.0% | |
AACAGCAATATGTCTTAGCA+TGG | + | chr1.2:50966173-50966192 | MS.gene068551:CDS | 35.0% | |
ACGAGAAAAGAAAACTAACC+TGG | - | chr1.2:50966683-50966702 | None:intergenic | 35.0% | |
AGCAAAATCTATGTTGAAGG+AGG | - | chr1.2:50967350-50967369 | None:intergenic | 35.0% | |
ATGCTTGCCAATACACTAAA+TGG | - | chr1.2:50967406-50967425 | None:intergenic | 35.0% | |
CAAAGAAGGTGACAATAGTT+GGG | + | chr1.2:50967371-50967390 | MS.gene068551:CDS | 35.0% | |
GACACTTTAAATTGGAAGGT+GGG | + | chr1.2:50966709-50966728 | MS.gene068551:intron | 35.0% | |
GGAGTAATTGAGTCAGAATT+TGG | - | chr1.2:50966504-50966523 | None:intergenic | 35.0% | |
GTAACACCGACACTTTAAAT+TGG | + | chr1.2:50966701-50966720 | MS.gene068551:intron | 35.0% | |
TATGTCACACATTTACCGAA+TGG | + | chr1.2:50967276-50967295 | MS.gene068551:intron | 35.0% | |
TCAAATACCATTCAACTTGG+AGG | + | chr1.2:50966216-50966235 | MS.gene068551:CDS | 35.0% | |
TGCAGCAAAATCTATGTTGA+AGG | - | chr1.2:50967353-50967372 | None:intergenic | 35.0% | |
TGTGACTCCATTTAGTGTAT+TGG | + | chr1.2:50967396-50967415 | MS.gene068551:CDS | 35.0% | |
TTCTGTCTTGGCATTAACTA+AGG | + | chr1.2:50966587-50966606 | MS.gene068551:CDS | 35.0% | |
! | AACCAATCTCCTTTTCAGAA+TGG | - | chr1.2:50966478-50966497 | None:intergenic | 35.0% |
! | AAGAAGTGGTTTTCTTCTTG+GGG | - | chr1.2:50966341-50966360 | None:intergenic | 35.0% |
! | AGAAGAAGTGGTTTTCTTCT+TGG | - | chr1.2:50966343-50966362 | None:intergenic | 35.0% |
! | AGGTGAAGAATGCACAATTT+TGG | + | chr1.2:50967431-50967450 | MS.gene068551:CDS | 35.0% |
! | CACCTTCCAATTTAAAGTGT+CGG | - | chr1.2:50966710-50966729 | None:intergenic | 35.0% |
! | CATAGATTTTGCTGCAAAGA+AGG | + | chr1.2:50967357-50967376 | MS.gene068551:CDS | 35.0% |
! | CTGCATTTATTGCTTGCTAA+GGG | + | chr1.2:50966890-50966909 | MS.gene068551:intron | 35.0% |
! | GAAGAAGTGGTTTTCTTCTT+GGG | - | chr1.2:50966342-50966361 | None:intergenic | 35.0% |
! | GCAAAAGAAGAAAAGTACAG+TGG | + | chr1.2:50966413-50966432 | MS.gene068551:CDS | 35.0% |
! | TCTGCATTTATTGCTTGCTA+AGG | + | chr1.2:50966889-50966908 | MS.gene068551:intron | 35.0% |
! | TGTATTGGCAAGCATATCAA+AGG | + | chr1.2:50967411-50967430 | MS.gene068551:CDS | 35.0% |
! | TTCCATTCTGAAAAGGAGAT+TGG | + | chr1.2:50966473-50966492 | MS.gene068551:CDS | 35.0% |
!! | CATCTCTAAAATGCAAGGTA+TGG | + | chr1.2:50967105-50967124 | MS.gene068551:intron | 35.0% |
!!! | ATCTTGTTGATTTTATGGGC+AGG | + | chr1.2:50967319-50967338 | MS.gene068551:intron | 35.0% |
AGGGTTTCTTTGCATTGCAA+AGG | + | chr1.2:50967058-50967077 | MS.gene068551:CDS | 40.0% | |
ATCCAACCCTGCATCTAAAT+CGG | + | chr1.2:50966647-50966666 | MS.gene068551:CDS | 40.0% | |
CACCGACACTTTAAATTGGA+AGG | + | chr1.2:50966705-50966724 | MS.gene068551:intron | 40.0% | |
CGACACTTTAAATTGGAAGG+TGG | + | chr1.2:50966708-50966727 | MS.gene068551:intron | 40.0% | |
GCAAAGAAGGTGACAATAGT+TGG | + | chr1.2:50967370-50967389 | MS.gene068551:CDS | 40.0% | |
GGGTTTCTTTGCATTGCAAA+GGG | + | chr1.2:50967059-50967078 | MS.gene068551:CDS | 40.0% | |
TCTGACTCAATTACTCCACA+TGG | + | chr1.2:50966507-50966526 | MS.gene068551:CDS | 40.0% | |
TCTTCTTCTTCCAAGCCAAT+TGG | + | chr1.2:50966357-50966376 | MS.gene068551:CDS | 40.0% | |
TGGCTTAGAAGAGTAACTGT+TGG | - | chr1.2:50966448-50966467 | None:intergenic | 40.0% | |
TTGAGCAGGTTGTAGTATTG+AGG | + | chr1.2:50967038-50967057 | MS.gene068551:intron | 40.0% | |
TTGGACACATTCAACACATG+TGG | + | chr1.2:50966750-50966769 | MS.gene068551:intron | 40.0% | |
! | AAGAAAACTAACCTGGCTTG+AGG | - | chr1.2:50966676-50966695 | None:intergenic | 40.0% |
! | GCTAAGACATATTGCTGTTG+AGG | - | chr1.2:50966172-50966191 | None:intergenic | 40.0% |
! | GTTTTCTTCTTGGGGTCAAT+AGG | - | chr1.2:50966333-50966352 | None:intergenic | 40.0% |
! | TGAGCAGGTTGTAGTATTGA+GGG | + | chr1.2:50967039-50967058 | MS.gene068551:intron | 40.0% |
ACAAGGAGCAGTGATAGTCT+TGG | - | chr1.2:50966295-50966314 | None:intergenic | 45.0% | |
AGGAACCCGATTTAGATGCA+GGG | - | chr1.2:50966656-50966675 | None:intergenic | 45.0% | |
CATGTTCTGTCCAATTGGCT+TGG | - | chr1.2:50966370-50966389 | None:intergenic | 45.0% | |
GGTAGCTGAGAAGAAGAACA+AGG | - | chr1.2:50966312-50966331 | None:intergenic | 45.0% | |
GTCTAGTGTCAATGCTCCAT+AGG | + | chr1.2:50966823-50966842 | MS.gene068551:intron | 45.0% | |
TCCAACCCTGCATCTAAATC+GGG | + | chr1.2:50966648-50966667 | MS.gene068551:CDS | 45.0% | |
TGAATGTGTCCAACCTGTGT+TGG | - | chr1.2:50966743-50966762 | None:intergenic | 45.0% | |
! | AGTGACGCAGCTTTTGTAGA+TGG | + | chr1.2:50966549-50966568 | MS.gene068551:CDS | 45.0% |
! | GACTTTGCCTCCAAGTTGAA+TGG | - | chr1.2:50966226-50966245 | None:intergenic | 45.0% |
! | TGCATTGCAAAGGGTGTGAA+GGG | + | chr1.2:50967068-50967087 | MS.gene068551:CDS | 45.0% |
! | TGGCTTGGAAGAAGAAGAAG+TGG | - | chr1.2:50966355-50966374 | None:intergenic | 45.0% |
! | TTACCGGTGTCAATGAGAAG+TGG | + | chr1.2:50966791-50966810 | MS.gene068551:intron | 45.0% |
! | TTGCATTGCAAAGGGTGTGA+AGG | + | chr1.2:50967067-50967086 | MS.gene068551:CDS | 45.0% |
! | TTGCCACTTCTCATTGACAC+CGG | - | chr1.2:50966797-50966816 | None:intergenic | 45.0% |
ACCCGATTTAGATGCAGGGT+TGG | - | chr1.2:50966652-50966671 | None:intergenic | 50.0% | |
GAGGAACCCGATTTAGATGC+AGG | - | chr1.2:50966657-50966676 | None:intergenic | 50.0% | |
TAAATCGGGTTCCTCAAGCC+AGG | + | chr1.2:50966662-50966681 | MS.gene068551:CDS | 50.0% | |
!! | GCACAATTTTGGCCAGCACT+TGG | + | chr1.2:50967442-50967461 | MS.gene068551:CDS | 50.0% |
!! | TTGGTGTCAGATCCAAGTGC+TGG | - | chr1.2:50967457-50967476 | None:intergenic | 50.0% |
GTCCAACCTGTGTTGGACAC+TGG | - | chr1.2:50966736-50966755 | None:intergenic | 55.0% | |
GTCCAGTGTCCAACACAGGT+TGG | + | chr1.2:50966731-50966750 | MS.gene068551:intron | 55.0% | |
! | AAGGGTGTGAAGGGAAGCTG+AGG | + | chr1.2:50967077-50967096 | MS.gene068551:CDS | 55.0% |
GTGGGTCCAGTGTCCAACAC+AGG | + | chr1.2:50966727-50966746 | MS.gene068551:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 50966135 | 50967495 | 50966135 | ID=MS.gene068551 |
chr1.2 | mRNA | 50966135 | 50967495 | 50966135 | ID=MS.gene068551.t1;Parent=MS.gene068551 |
chr1.2 | exon | 50966135 | 50966683 | 50966135 | ID=MS.gene068551.t1.exon1;Parent=MS.gene068551.t1 |
chr1.2 | CDS | 50966135 | 50966683 | 50966135 | ID=cds.MS.gene068551.t1;Parent=MS.gene068551.t1 |
chr1.2 | exon | 50967046 | 50967121 | 50967046 | ID=MS.gene068551.t1.exon2;Parent=MS.gene068551.t1 |
chr1.2 | CDS | 50967046 | 50967121 | 50967046 | ID=cds.MS.gene068551.t1;Parent=MS.gene068551.t1 |
chr1.2 | exon | 50967341 | 50967495 | 50967341 | ID=MS.gene068551.t1.exon3;Parent=MS.gene068551.t1 |
chr1.2 | CDS | 50967341 | 50967495 | 50967341 | ID=cds.MS.gene068551.t1;Parent=MS.gene068551.t1 |
Gene Sequence |
Protein sequence |