Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22710.t1 | XP_013450654.1 | 90.9 | 584 | 37 | 4 | 1 | 578 | 1 | 574 | 2.20E-282 | 981.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22710.t1 | A0A3Q7ELQ2 | 54.8 | 609 | 216 | 15 | 7 | 572 | 6 | 598 | 3.3e-157 | 556.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22710.t1 | A0A072U4Q4 | 90.9 | 584 | 37 | 4 | 1 | 578 | 1 | 574 | 1.6e-282 | 981.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene22710.t1 | TF | bHLH |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene22710 | 0.81755 | 3.11E-52 | -1.69E-46 |
| MS.gene049435 | MS.gene22710 | 0.828233 | 1.01E-54 | -1.69E-46 |
| MS.gene050759 | MS.gene22710 | 0.823954 | 1.05E-53 | -1.69E-46 |
| MS.gene050826 | MS.gene22710 | 0.837939 | 3.87E-57 | -1.69E-46 |
| MS.gene050962 | MS.gene22710 | 0.818667 | 1.74E-52 | -1.69E-46 |
| MS.gene051198 | MS.gene22710 | 0.803526 | 3.34E-49 | -1.69E-46 |
| MS.gene051800 | MS.gene22710 | 0.815667 | 8.22E-52 | -1.69E-46 |
| MS.gene052020 | MS.gene22710 | 0.816257 | 6.07E-52 | -1.69E-46 |
| MS.gene052863 | MS.gene22710 | 0.814506 | 1.49E-51 | -1.69E-46 |
| MS.gene054236 | MS.gene22710 | 0.822635 | 2.13E-53 | -1.69E-46 |
| MS.gene05423 | MS.gene22710 | 0.800878 | 1.17E-48 | -1.69E-46 |
| MS.gene054467 | MS.gene22710 | 0.809176 | 2.15E-50 | -1.69E-46 |
| MS.gene05468 | MS.gene22710 | 0.807686 | 4.48E-50 | -1.69E-46 |
| MS.gene054775 | MS.gene22710 | 0.813968 | 1.96E-51 | -1.69E-46 |
| MS.gene054801 | MS.gene22710 | 0.810642 | 1.04E-50 | -1.69E-46 |
| MS.gene055926 | MS.gene22710 | 0.878073 | 3.77E-69 | -1.69E-46 |
| MS.gene056173 | MS.gene22710 | 0.810079 | 1.38E-50 | -1.69E-46 |
| MS.gene057012 | MS.gene22710 | 0.802184 | 6.33E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene22710 | 0.807825 | 4.18E-50 | -1.69E-46 |
| MS.gene059609 | MS.gene22710 | 0.823041 | 1.71E-53 | -1.69E-46 |
| MS.gene059664 | MS.gene22710 | 0.855329 | 6.79E-62 | -1.69E-46 |
| MS.gene059842 | MS.gene22710 | 0.803046 | 4.20E-49 | -1.69E-46 |
| MS.gene060137 | MS.gene22710 | -0.817001 | 4.14E-52 | -1.69E-46 |
| MS.gene060503 | MS.gene22710 | 0.817586 | 3.05E-52 | -1.69E-46 |
| MS.gene060802 | MS.gene22710 | 0.858591 | 7.42E-63 | -1.69E-46 |
| MS.gene060803 | MS.gene22710 | 0.851256 | 9.99E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene23513 | MS.gene22710 | PPI |
| MS.gene97030 | MS.gene22710 | PPI |
| MS.gene020342 | MS.gene22710 | PPI |
| MS.gene22710 | MS.gene018737 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22710.t1 | MTR_7g117670 | 93.664 | 584 | 21 | 5 | 1 | 578 | 1 | 574 | 0.0 | 1031 |
| MS.gene22710.t1 | MTR_8g027495 | 57.686 | 631 | 181 | 17 | 8 | 571 | 12 | 623 | 0.0 | 619 |
| MS.gene22710.t1 | MTR_7g096350 | 36.522 | 575 | 266 | 21 | 10 | 566 | 9 | 502 | 1.13e-97 | 306 |
| MS.gene22710.t1 | MTR_5g030430 | 41.704 | 223 | 105 | 5 | 372 | 572 | 458 | 677 | 4.26e-42 | 161 |
| MS.gene22710.t1 | MTR_5g030430 | 27.119 | 236 | 154 | 3 | 8 | 239 | 3 | 224 | 6.34e-21 | 97.4 |
| MS.gene22710.t1 | MTR_8g067280 | 42.365 | 203 | 85 | 5 | 388 | 565 | 444 | 639 | 2.14e-40 | 156 |
| MS.gene22710.t1 | MTR_8g067280 | 31.944 | 216 | 115 | 9 | 48 | 252 | 52 | 246 | 3.80e-17 | 85.5 |
| MS.gene22710.t1 | MTR_8g024790 | 38.372 | 172 | 97 | 1 | 386 | 548 | 271 | 442 | 2.11e-33 | 133 |
| MS.gene22710.t1 | MTR_8g024770 | 37.566 | 189 | 104 | 4 | 386 | 561 | 259 | 446 | 6.88e-31 | 125 |
| MS.gene22710.t1 | MTR_5g030420 | 30.049 | 203 | 124 | 4 | 42 | 240 | 20 | 208 | 1.77e-18 | 85.5 |
| MS.gene22710.t1 | MTR_5g014600 | 30.058 | 173 | 98 | 2 | 382 | 532 | 125 | 296 | 1.97e-18 | 87.0 |
| MS.gene22710.t1 | MTR_5g030420 | 30.049 | 203 | 124 | 4 | 42 | 240 | 20 | 208 | 2.43e-18 | 85.5 |
| MS.gene22710.t1 | MTR_4g097950 | 37.097 | 124 | 57 | 2 | 406 | 511 | 70 | 190 | 1.62e-17 | 82.8 |
| MS.gene22710.t1 | MTR_5g014640 | 37.302 | 126 | 68 | 4 | 393 | 513 | 145 | 264 | 2.25e-16 | 80.9 |
| MS.gene22710.t1 | MTR_4g067010 | 31.515 | 165 | 103 | 3 | 393 | 551 | 137 | 297 | 4.74e-16 | 80.1 |
| MS.gene22710.t1 | MTR_5g014520 | 28.108 | 185 | 122 | 4 | 389 | 564 | 142 | 324 | 6.29e-16 | 79.7 |
| MS.gene22710.t1 | MTR_2g010450 | 29.412 | 136 | 87 | 1 | 406 | 532 | 177 | 312 | 7.02e-16 | 79.7 |
| MS.gene22710.t1 | MTR_4g092700 | 57.627 | 59 | 25 | 0 | 404 | 462 | 156 | 214 | 7.49e-16 | 79.3 |
| MS.gene22710.t1 | MTR_2g104550 | 33.333 | 153 | 74 | 4 | 384 | 508 | 97 | 249 | 7.50e-16 | 79.3 |
| MS.gene22710.t1 | MTR_5g014560 | 27.957 | 186 | 112 | 4 | 393 | 563 | 119 | 297 | 1.16e-15 | 78.6 |
| MS.gene22710.t1 | MTR_0011s0210 | 32.298 | 161 | 97 | 4 | 399 | 551 | 180 | 336 | 1.44e-14 | 75.9 |
| MS.gene22710.t1 | MTR_0250s0040 | 32.143 | 168 | 98 | 6 | 383 | 541 | 71 | 231 | 3.00e-14 | 73.6 |
| MS.gene22710.t1 | MTR_0246s0050 | 29.651 | 172 | 107 | 4 | 387 | 553 | 136 | 298 | 3.28e-14 | 74.3 |
| MS.gene22710.t1 | MTR_4g098035 | 29.651 | 172 | 107 | 4 | 387 | 553 | 157 | 319 | 3.52e-14 | 74.3 |
| MS.gene22710.t1 | MTR_1g072320 | 22.335 | 197 | 132 | 6 | 50 | 240 | 7 | 188 | 3.75e-14 | 75.9 |
| MS.gene22710.t1 | MTR_1g072320 | 46.512 | 86 | 44 | 2 | 390 | 473 | 453 | 538 | 8.01e-14 | 75.1 |
| MS.gene22710.t1 | MTR_4g066380 | 49.333 | 75 | 34 | 1 | 387 | 461 | 138 | 208 | 4.00e-14 | 74.3 |
| MS.gene22710.t1 | MTR_6g047550 | 34.532 | 139 | 76 | 4 | 328 | 463 | 104 | 230 | 4.52e-14 | 73.2 |
| MS.gene22710.t1 | MTR_0246s0020 | 51.429 | 70 | 28 | 2 | 392 | 461 | 190 | 253 | 6.21e-14 | 73.9 |
| MS.gene22710.t1 | MTR_0246s0020 | 51.429 | 70 | 28 | 2 | 392 | 461 | 190 | 253 | 7.35e-14 | 73.9 |
| MS.gene22710.t1 | MTR_2g084280 | 31.333 | 150 | 97 | 3 | 410 | 553 | 137 | 286 | 7.56e-14 | 73.2 |
| MS.gene22710.t1 | MTR_8g098275 | 52.308 | 65 | 31 | 0 | 402 | 466 | 240 | 304 | 7.57e-14 | 74.3 |
| MS.gene22710.t1 | MTR_0011s0260 | 31.677 | 161 | 98 | 3 | 399 | 551 | 180 | 336 | 8.36e-14 | 73.6 |
| MS.gene22710.t1 | MTR_3g498695 | 52.239 | 67 | 32 | 0 | 404 | 470 | 296 | 362 | 1.11e-13 | 73.9 |
| MS.gene22710.t1 | MTR_8g098275 | 52.308 | 65 | 31 | 0 | 402 | 466 | 304 | 368 | 1.13e-13 | 73.9 |
| MS.gene22710.t1 | MTR_3g498695 | 52.239 | 67 | 32 | 0 | 404 | 470 | 296 | 362 | 1.16e-13 | 73.9 |
| MS.gene22710.t1 | MTR_4g097940 | 35.897 | 117 | 66 | 3 | 395 | 506 | 148 | 260 | 1.18e-13 | 72.8 |
| MS.gene22710.t1 | MTR_8g098275 | 52.308 | 65 | 31 | 0 | 402 | 466 | 397 | 461 | 1.50e-13 | 73.9 |
| MS.gene22710.t1 | MTR_8g098275 | 28.889 | 180 | 108 | 7 | 65 | 238 | 17 | 182 | 6.43e-12 | 68.9 |
| MS.gene22710.t1 | MTR_2g038040 | 58.182 | 55 | 23 | 0 | 407 | 461 | 53 | 107 | 1.66e-13 | 70.9 |
| MS.gene22710.t1 | MTR_4g057270 | 30.588 | 170 | 105 | 5 | 396 | 553 | 140 | 308 | 1.77e-13 | 72.4 |
| MS.gene22710.t1 | MTR_1g112680 | 41.053 | 95 | 52 | 2 | 369 | 463 | 284 | 374 | 2.13e-13 | 73.2 |
| MS.gene22710.t1 | MTR_6g047570 | 26.423 | 246 | 158 | 7 | 313 | 547 | 75 | 308 | 2.59e-13 | 71.6 |
| MS.gene22710.t1 | MTR_4g066460 | 49.333 | 75 | 34 | 1 | 387 | 461 | 140 | 210 | 3.07e-13 | 71.6 |
| MS.gene22710.t1 | MTR_4g009110 | 26.702 | 191 | 106 | 5 | 333 | 508 | 116 | 287 | 4.61e-13 | 71.2 |
| MS.gene22710.t1 | MTR_7g083900 | 54.098 | 61 | 28 | 0 | 404 | 464 | 284 | 344 | 5.60e-13 | 71.6 |
| MS.gene22710.t1 | MTR_7g083900 | 54.098 | 61 | 28 | 0 | 404 | 464 | 284 | 344 | 5.67e-13 | 71.6 |
| MS.gene22710.t1 | MTR_2g104490 | 33.600 | 125 | 68 | 3 | 394 | 508 | 126 | 245 | 6.02e-13 | 70.1 |
| MS.gene22710.t1 | MTR_2g104490 | 33.600 | 125 | 68 | 3 | 394 | 508 | 126 | 245 | 6.77e-13 | 70.1 |
| MS.gene22710.t1 | MTR_4g009540 | 23.762 | 202 | 139 | 3 | 380 | 566 | 126 | 327 | 1.93e-12 | 68.9 |
| MS.gene22710.t1 | MTR_2g022280 | 26.404 | 178 | 108 | 3 | 405 | 560 | 1 | 177 | 2.43e-12 | 66.6 |
| MS.gene22710.t1 | MTR_4g009540 | 26.573 | 143 | 91 | 2 | 380 | 508 | 126 | 268 | 5.45e-12 | 67.4 |
| MS.gene22710.t1 | MTR_2g104560 | 25.000 | 168 | 119 | 3 | 407 | 567 | 55 | 222 | 5.82e-12 | 66.2 |
| MS.gene22710.t1 | MTR_4g097920 | 46.154 | 65 | 31 | 1 | 395 | 459 | 133 | 193 | 1.92e-11 | 65.9 |
| MS.gene22710.t1 | MTR_3g030700 | 43.662 | 71 | 40 | 0 | 394 | 464 | 184 | 254 | 2.13e-11 | 66.2 |
| MS.gene22710.t1 | MTR_4g097920 | 46.154 | 65 | 31 | 1 | 395 | 459 | 148 | 208 | 2.14e-11 | 65.9 |
| MS.gene22710.t1 | MTR_3g104100 | 48.387 | 62 | 29 | 1 | 410 | 471 | 199 | 257 | 5.44e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22710.t1 | AT1G01260 | 48.214 | 616 | 247 | 15 | 4 | 577 | 3 | 588 | 1.43e-176 | 512 |
| MS.gene22710.t1 | AT1G01260 | 48.214 | 616 | 247 | 15 | 4 | 577 | 3 | 588 | 1.43e-176 | 512 |
| MS.gene22710.t1 | AT1G01260 | 48.214 | 616 | 247 | 15 | 4 | 577 | 3 | 588 | 1.43e-176 | 512 |
| MS.gene22710.t1 | AT2G46510 | 47.555 | 593 | 234 | 18 | 9 | 572 | 8 | 552 | 5.46e-163 | 477 |
| MS.gene22710.t1 | AT4G17880 | 32.914 | 556 | 301 | 17 | 48 | 565 | 61 | 582 | 1.90e-72 | 243 |
| MS.gene22710.t1 | AT4G16430 | 49.730 | 185 | 74 | 3 | 385 | 566 | 299 | 467 | 1.66e-53 | 189 |
| MS.gene22710.t1 | AT4G16430 | 37.500 | 240 | 120 | 6 | 10 | 240 | 8 | 226 | 9.27e-37 | 143 |
| MS.gene22710.t1 | AT5G46760 | 44.444 | 216 | 106 | 5 | 361 | 564 | 371 | 584 | 2.11e-45 | 169 |
| MS.gene22710.t1 | AT1G32640 | 44.211 | 190 | 90 | 3 | 387 | 564 | 433 | 618 | 1.02e-38 | 150 |
| MS.gene22710.t1 | AT1G32640 | 32.828 | 198 | 117 | 4 | 48 | 240 | 66 | 252 | 8.49e-20 | 94.0 |
| MS.gene22710.t1 | AT5G46830 | 30.080 | 502 | 272 | 18 | 67 | 548 | 49 | 491 | 1.14e-36 | 143 |
| MS.gene22710.t1 | AT5G57150 | 33.645 | 214 | 111 | 8 | 386 | 578 | 40 | 243 | 3.03e-20 | 90.9 |
| MS.gene22710.t1 | AT5G57150 | 33.889 | 180 | 96 | 6 | 386 | 548 | 40 | 213 | 8.97e-19 | 85.9 |
| MS.gene22710.t1 | AT5G57150 | 33.889 | 180 | 96 | 6 | 386 | 548 | 41 | 214 | 1.44e-18 | 85.1 |
| MS.gene22710.t1 | AT5G57150 | 33.889 | 180 | 96 | 6 | 386 | 548 | 41 | 214 | 1.54e-18 | 85.5 |
| MS.gene22710.t1 | AT5G57150 | 33.889 | 180 | 96 | 6 | 386 | 548 | 41 | 214 | 1.62e-18 | 86.3 |
| MS.gene22710.t1 | AT4G00870 | 37.500 | 136 | 74 | 1 | 405 | 529 | 248 | 383 | 2.54e-18 | 88.2 |
| MS.gene22710.t1 | AT4G37850 | 28.194 | 227 | 123 | 5 | 358 | 556 | 98 | 312 | 3.43e-18 | 86.7 |
| MS.gene22710.t1 | AT4G37850 | 28.194 | 227 | 123 | 5 | 358 | 556 | 98 | 312 | 3.43e-18 | 86.7 |
| MS.gene22710.t1 | AT4G09820 | 28.194 | 227 | 145 | 5 | 36 | 253 | 2 | 219 | 5.28e-18 | 87.8 |
| MS.gene22710.t1 | AT4G09820 | 34.351 | 131 | 55 | 3 | 382 | 508 | 350 | 453 | 5.42e-16 | 81.6 |
| MS.gene22710.t1 | AT5G41315 | 29.167 | 216 | 127 | 4 | 41 | 240 | 1 | 206 | 1.47e-16 | 83.6 |
| MS.gene22710.t1 | AT5G41315 | 48.571 | 70 | 36 | 0 | 400 | 469 | 435 | 504 | 8.48e-14 | 74.7 |
| MS.gene22710.t1 | AT5G41315 | 29.167 | 216 | 127 | 4 | 41 | 240 | 6 | 211 | 1.59e-16 | 83.6 |
| MS.gene22710.t1 | AT5G41315 | 48.571 | 70 | 36 | 0 | 400 | 469 | 440 | 509 | 9.31e-14 | 74.7 |
| MS.gene22710.t1 | AT5G41315 | 29.167 | 216 | 127 | 4 | 41 | 240 | 9 | 214 | 1.61e-16 | 83.6 |
| MS.gene22710.t1 | AT5G41315 | 48.571 | 70 | 36 | 0 | 400 | 469 | 443 | 512 | 9.18e-14 | 74.7 |
| MS.gene22710.t1 | AT1G63650 | 29.148 | 223 | 128 | 8 | 41 | 247 | 1 | 209 | 1.75e-15 | 80.1 |
| MS.gene22710.t1 | AT1G63650 | 48.529 | 68 | 35 | 0 | 402 | 469 | 401 | 468 | 1.54e-13 | 73.9 |
| MS.gene22710.t1 | AT1G63650 | 29.148 | 223 | 128 | 8 | 41 | 247 | 1 | 209 | 1.75e-15 | 80.1 |
| MS.gene22710.t1 | AT1G63650 | 48.529 | 68 | 35 | 0 | 402 | 469 | 401 | 468 | 1.54e-13 | 73.9 |
| MS.gene22710.t1 | AT1G63650 | 29.148 | 223 | 128 | 8 | 41 | 247 | 1 | 209 | 1.75e-15 | 80.1 |
| MS.gene22710.t1 | AT1G63650 | 48.529 | 68 | 35 | 0 | 402 | 469 | 401 | 468 | 1.54e-13 | 73.9 |
| MS.gene22710.t1 | AT4G29930 | 31.757 | 148 | 94 | 3 | 390 | 536 | 43 | 184 | 1.50e-14 | 73.9 |
| MS.gene22710.t1 | AT4G29930 | 29.091 | 165 | 110 | 3 | 390 | 553 | 43 | 201 | 1.72e-14 | 73.6 |
| MS.gene22710.t1 | AT4G00480 | 29.798 | 198 | 106 | 7 | 67 | 243 | 36 | 221 | 2.68e-14 | 76.3 |
| MS.gene22710.t1 | AT2G22750 | 32.911 | 158 | 89 | 3 | 388 | 532 | 136 | 289 | 3.39e-14 | 74.3 |
| MS.gene22710.t1 | AT2G22750 | 32.911 | 158 | 89 | 3 | 388 | 532 | 140 | 293 | 3.40e-14 | 74.3 |
| MS.gene22710.t1 | AT2G22750 | 32.911 | 158 | 89 | 3 | 388 | 532 | 140 | 293 | 3.40e-14 | 74.3 |
| MS.gene22710.t1 | AT1G12860 | 53.731 | 67 | 31 | 0 | 404 | 470 | 265 | 331 | 3.51e-14 | 75.5 |
| MS.gene22710.t1 | AT2G22750 | 32.911 | 158 | 89 | 3 | 388 | 532 | 112 | 265 | 3.57e-14 | 73.9 |
| MS.gene22710.t1 | AT2G22750 | 32.911 | 158 | 89 | 3 | 388 | 532 | 112 | 265 | 3.60e-14 | 73.9 |
| MS.gene22710.t1 | AT4G00480 | 29.798 | 198 | 106 | 7 | 67 | 243 | 36 | 221 | 3.70e-14 | 75.9 |
| MS.gene22710.t1 | AT1G12860 | 53.731 | 67 | 31 | 0 | 404 | 470 | 265 | 331 | 3.72e-14 | 75.5 |
| MS.gene22710.t1 | AT4G00480 | 29.798 | 198 | 106 | 7 | 67 | 243 | 36 | 221 | 6.75e-14 | 75.1 |
| MS.gene22710.t1 | AT4G29930 | 28.144 | 167 | 112 | 4 | 390 | 553 | 43 | 204 | 7.63e-14 | 71.6 |
| MS.gene22710.t1 | AT2G16910 | 33.728 | 169 | 73 | 5 | 410 | 546 | 318 | 479 | 9.94e-14 | 74.3 |
| MS.gene22710.t1 | AT3G26744 | 55.738 | 61 | 27 | 0 | 404 | 464 | 305 | 365 | 2.19e-13 | 73.2 |
| MS.gene22710.t1 | AT3G26744 | 55.738 | 61 | 27 | 0 | 404 | 464 | 305 | 365 | 2.39e-13 | 73.2 |
| MS.gene22710.t1 | AT3G26744 | 55.738 | 61 | 27 | 0 | 404 | 464 | 305 | 365 | 2.39e-13 | 73.2 |
| MS.gene22710.t1 | AT3G26744 | 55.738 | 61 | 27 | 0 | 404 | 464 | 305 | 365 | 2.39e-13 | 73.2 |
| MS.gene22710.t1 | AT4G29930 | 48.611 | 72 | 32 | 1 | 390 | 461 | 43 | 109 | 2.51e-13 | 69.3 |
| MS.gene22710.t1 | AT4G29930 | 48.611 | 72 | 32 | 1 | 390 | 461 | 43 | 109 | 3.06e-13 | 70.5 |
| MS.gene22710.t1 | AT4G29930 | 48.611 | 72 | 32 | 1 | 390 | 461 | 43 | 109 | 3.06e-13 | 70.5 |
| MS.gene22710.t1 | AT4G29930 | 48.611 | 72 | 32 | 1 | 390 | 461 | 43 | 109 | 3.82e-13 | 70.1 |
| MS.gene22710.t1 | AT2G22760 | 33.628 | 113 | 64 | 2 | 407 | 508 | 120 | 232 | 4.48e-13 | 70.5 |
| MS.gene22710.t1 | AT2G22760 | 33.628 | 113 | 64 | 2 | 407 | 508 | 120 | 232 | 5.22e-13 | 70.5 |
| MS.gene22710.t1 | AT2G22770 | 50.000 | 66 | 30 | 1 | 400 | 462 | 123 | 188 | 5.05e-12 | 67.8 |
| MS.gene22710.t1 | AT2G28160 | 45.312 | 64 | 35 | 0 | 410 | 473 | 135 | 198 | 5.60e-12 | 67.4 |
| MS.gene22710.t1 | AT2G28160 | 45.312 | 64 | 35 | 0 | 410 | 473 | 135 | 198 | 6.47e-12 | 67.4 |
| MS.gene22710.t1 | AT5G65640 | 28.902 | 173 | 109 | 4 | 403 | 566 | 175 | 342 | 5.35e-11 | 65.1 |
Find 110 sgRNAs with CRISPR-Local
Find 127 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAATTCAACACAACTTT+TGG | 0.177209 | 7.4:-878188 | None:intergenic |
| ATTGGAATTACGCAATTTAT+TGG | 0.206579 | 7.4:+877577 | MS.gene22710:CDS |
| CTGACTTAATTACAAAATTA+TGG | 0.220746 | 7.4:-879006 | None:intergenic |
| TTACTGCTTTCGTTCTTTCT+TGG | 0.235602 | 7.4:+877956 | MS.gene22710:CDS |
| TGCGTAATTCCAATTGAAAT+TGG | 0.241887 | 7.4:-877568 | None:intergenic |
| ATGCCTATATGGACAAAGTT+TGG | 0.244044 | 7.4:-879099 | None:intergenic |
| TTCAACAAATCAAAGATTTC+AGG | 0.251699 | 7.4:-878059 | None:intergenic |
| CCGGGTCCACCATACCCTTT+TGG | 0.264704 | 7.4:-877885 | None:intergenic |
| CTCTATTTATCATGCCTATA+TGG | 0.268867 | 7.4:-879110 | None:intergenic |
| CAGAAGTTGCATAAAGCTTT+TGG | 0.288502 | 7.4:+877774 | MS.gene22710:CDS |
| GAAACTTGCCATTAGGAAAA+TGG | 0.290252 | 7.4:+878235 | MS.gene22710:CDS |
| GATGAAGACAATTACGCTTT+TGG | 0.306225 | 7.4:+877804 | MS.gene22710:CDS |
| TCTGCCTCCACATGATTTAG+AGG | 0.320999 | 7.4:-878590 | None:intergenic |
| GATCAATAAAGCGCATGATA+TGG | 0.340119 | 7.4:+877385 | MS.gene22710:CDS |
| TGCCTATATGGACAAAGTTT+GGG | 0.350641 | 7.4:-879098 | None:intergenic |
| ATTCTTCATCCAATTTCAAT+TGG | 0.357065 | 7.4:+877559 | MS.gene22710:CDS |
| ACCAGAAGCAAAACACTTAC+CGG | 0.359802 | 7.4:-877904 | None:intergenic |
| TTGTCCATCTTGGAAATATT+CGG | 0.360963 | 7.4:-878668 | None:intergenic |
| TTAGGGAGAAACTTGCCATT+AGG | 0.364646 | 7.4:+878228 | MS.gene22710:CDS |
| GGACAAAGTTTGGGTTTGTA+AGG | 0.367197 | 7.4:-879089 | None:intergenic |
| AATAACCGGTCTCGCAGAAT+TGG | 0.375253 | 7.4:-878468 | None:intergenic |
| CGACTTTCTAAGTCAAAATC+TGG | 0.375807 | 7.4:+877600 | MS.gene22710:CDS |
| TGTTCTTGGTGCTCGAGCTT+TGG | 0.376498 | 7.4:+877437 | MS.gene22710:CDS |
| ACCATGGTTGGAGCTGTTCT+TGG | 0.376666 | 7.4:+877423 | MS.gene22710:CDS |
| ACTCCACCTTCTTCTTCGTT+TGG | 0.377124 | 7.4:-877663 | None:intergenic |
| CTGGTGATTACGTTCTTTGT+TGG | 0.387307 | 7.4:+877619 | MS.gene22710:CDS |
| TGCATTGGCATCTGCCTTTG+TGG | 0.387976 | 7.4:-878416 | None:intergenic |
| CTAGGTCTCCTTTCATCGCT+AGG | 0.390719 | 7.4:-878530 | None:intergenic |
| CATTTGGAAGCAGTACTTCC+AGG | 0.403231 | 7.4:+878771 | MS.gene22710:CDS |
| GTTTCGATTAGTTTCGAAAC+AGG | 0.406082 | 7.4:-878920 | None:intergenic |
| ATTCGGTACAACAGCTCTTA+AGG | 0.408610 | 7.4:-878651 | None:intergenic |
| ATGGTATTTGTGGTTCTACT+TGG | 0.409907 | 7.4:+878306 | MS.gene22710:CDS |
| AACTTTCCTAGTGCTAGAAA+TGG | 0.411288 | 7.4:+878287 | MS.gene22710:CDS |
| TCTTTCTTGGCTAAATCTGC+TGG | 0.412934 | 7.4:+877969 | MS.gene22710:CDS |
| CGCGGAAGGAAGCCTGCTAA+TGG | 0.414504 | 7.4:+878557 | MS.gene22710:CDS |
| TGGTGATTACGTTCTTTGTT+GGG | 0.415145 | 7.4:+877620 | MS.gene22710:CDS |
| TAAAGATGCCTTGTCCATCT+TGG | 0.422075 | 7.4:-878678 | None:intergenic |
| TGAAACAAAGTATGAAGAAG+TGG | 0.425466 | 7.4:+877745 | MS.gene22710:CDS |
| TGCTTCTAATGGTGTGAGAA+AGG | 0.436502 | 7.4:+878358 | MS.gene22710:CDS |
| AGTTTGGGTTTGTAAGGAGT+TGG | 0.441750 | 7.4:-879083 | None:intergenic |
| TTGCTTCTGGTAAACATTTG+TGG | 0.442625 | 7.4:+877916 | MS.gene22710:CDS |
| GAATACTAGAGTTTCTCTTC+CGG | 0.446637 | 7.4:+878832 | MS.gene22710:CDS |
| TTGTAAGGAGTTGGATTCTC+GGG | 0.450320 | 7.4:-879074 | None:intergenic |
| GAGTCAGAGAGAGAATCATT+TGG | 0.451334 | 7.4:+878755 | MS.gene22710:CDS |
| ATGGACAAGGCATCTTTACT+TGG | 0.451417 | 7.4:+878683 | MS.gene22710:CDS |
| TAGAGTTTCTCTTCCGGATG+TGG | 0.452720 | 7.4:+878838 | MS.gene22710:CDS |
| GGTTCGTCCCTTCCATTAGC+AGG | 0.455729 | 7.4:-878569 | None:intergenic |
| GGCTTCCTTCCGCGCTTCCT+AGG | 0.458293 | 7.4:-878548 | None:intergenic |
| TGGTATTTGTGGTTCTACTT+GGG | 0.461524 | 7.4:+878307 | MS.gene22710:CDS |
| TACGTTCTTTGTTGGGCAGA+TGG | 0.462040 | 7.4:+877627 | MS.gene22710:CDS |
| AGTGCTAGAAATGGTATTTG+TGG | 0.472584 | 7.4:+878296 | MS.gene22710:CDS |
| TTTGTAAGGAGTTGGATTCT+CGG | 0.473242 | 7.4:-879075 | None:intergenic |
| CTTTCTTCATTGACCACACT+AGG | 0.491428 | 7.4:-878140 | None:intergenic |
| GAAGAAAGTACAGTTTCAAA+TGG | 0.494078 | 7.4:+878155 | MS.gene22710:CDS |
| TGCTGCAATCAACTTGTCCT+TGG | 0.495738 | 7.4:-879047 | None:intergenic |
| AATGATAATGATTGTGTGGC+AGG | 0.499914 | 7.4:-878113 | None:intergenic |
| TCAAGCGAAACTCAAGATCA+TGG | 0.503060 | 7.4:+878733 | MS.gene22710:CDS |
| ACGTTCTTTGTTGGGCAGAT+GGG | 0.511903 | 7.4:+877628 | MS.gene22710:CDS |
| AGTACTTCCAGGGATGGATC+AGG | 0.512089 | 7.4:+878782 | MS.gene22710:CDS |
| GAGGGCCAATTCTGCGAGAC+CGG | 0.516559 | 7.4:+878463 | MS.gene22710:CDS |
| TCAAGATGAGGTAATAGTAA+AGG | 0.517416 | 7.4:+878874 | MS.gene22710:CDS |
| AACCCAAACTTTGTCCATAT+AGG | 0.517452 | 7.4:+879096 | MS.gene22710:CDS |
| GGTATTTGTGGTTCTACTTG+GGG | 0.519442 | 7.4:+878308 | MS.gene22710:CDS |
| CGAGTTGCCTGATCCATCCC+TGG | 0.522358 | 7.4:-878789 | None:intergenic |
| CCGGAAAAGTCAATTTGCAT+TGG | 0.525652 | 7.4:-878431 | None:intergenic |
| GAGACCGGTTATTGCTGAAT+CGG | 0.527481 | 7.4:+878478 | MS.gene22710:CDS |
| TTGGCATCTGCCTTTGTGGT+TGG | 0.531676 | 7.4:-878412 | None:intergenic |
| ATTGGCCCTCGAATTTGCTC+CGG | 0.532064 | 7.4:-878450 | None:intergenic |
| GTTAGAGAAACTCTGAGTCT+TGG | 0.536388 | 7.4:+877684 | MS.gene22710:CDS |
| AGTTCCGATTCAGCAATAAC+CGG | 0.536707 | 7.4:-878482 | None:intergenic |
| CCAAAAGGGTATGGTGGACC+CGG | 0.545307 | 7.4:+877885 | MS.gene22710:CDS |
| GGAAGCAGTACTTCCAGGGA+TGG | 0.552030 | 7.4:+878776 | MS.gene22710:CDS |
| TGTACCGAATATTTCCAAGA+TGG | 0.552909 | 7.4:+878664 | MS.gene22710:CDS |
| GAAGCTTGAATATCCACATC+CGG | 0.553300 | 7.4:-878851 | None:intergenic |
| ATGTGGAGGCAGAGAGGCAA+AGG | 0.553319 | 7.4:+878600 | MS.gene22710:CDS |
| CCAGAAGCAAAACACTTACC+GGG | 0.554206 | 7.4:-877903 | None:intergenic |
| GAAGAAGAGAAAACCATGGT+TGG | 0.555055 | 7.4:+877411 | MS.gene22710:CDS |
| GAAACAAAGTATGAAGAAGT+GGG | 0.558139 | 7.4:+877746 | MS.gene22710:CDS |
| TCTACTTGGGGAGTGAATCA+AGG | 0.559151 | 7.4:+878320 | MS.gene22710:CDS |
| GAAGGAAGCCTGCTAATGGA+AGG | 0.564326 | 7.4:+878561 | MS.gene22710:CDS |
| ATTTGGAAGCAGTACTTCCA+GGG | 0.565753 | 7.4:+878772 | MS.gene22710:CDS |
| CTGATCAACCTAGCGATGAA+AGG | 0.566880 | 7.4:+878522 | MS.gene22710:CDS |
| AACTGTTTATCAAATGAGAG+TGG | 0.571748 | 7.4:+877474 | MS.gene22710:CDS |
| CAAATACCATTTCTAGCACT+AGG | 0.582823 | 7.4:-878293 | None:intergenic |
| GGAGACCTAGGAAGCGCGGA+AGG | 0.585153 | 7.4:+878543 | MS.gene22710:CDS |
| GAGAGTGGATTGATTGCTGT+TGG | 0.590794 | 7.4:+877489 | MS.gene22710:CDS |
| CTGTGTCGGTTACACGGTCA+AGG | 0.590950 | 7.4:-877827 | None:intergenic |
| ACTAATCGAAACATTCAAAG+AGG | 0.592504 | 7.4:+878931 | MS.gene22710:CDS |
| ACATCTCTGTGTCGGTTACA+CGG | 0.595335 | 7.4:-877833 | None:intergenic |
| TCTGAGTCTTGGCATAGAAG+AGG | 0.598956 | 7.4:+877695 | MS.gene22710:CDS |
| ACCAAGAACAGCTCCAACCA+TGG | 0.601753 | 7.4:-877424 | None:intergenic |
| AGAGAACCAAACGAAGAAGA+AGG | 0.608578 | 7.4:+877657 | MS.gene22710:CDS |
| ATTATCATTGTATCCTAGTG+TGG | 0.610408 | 7.4:+878127 | MS.gene22710:CDS |
| GGAACTTGTTGCTGATGTTG+AGG | 0.613094 | 7.4:+878499 | MS.gene22710:CDS |
| GAACCAAACGAAGAAGAAGG+TGG | 0.613103 | 7.4:+877660 | MS.gene22710:CDS |
| CTAGCGATGAAAGGAGACCT+AGG | 0.617300 | 7.4:+878531 | MS.gene22710:CDS |
| TATTCAAGCTTCTCAAGATG+AGG | 0.619645 | 7.4:+878862 | MS.gene22710:CDS |
| TCAACAACACCAAAATCAGT+AGG | 0.632462 | 7.4:-878014 | None:intergenic |
| TGGGGAGTGAATCAAGGTCA+AGG | 0.636279 | 7.4:+878326 | MS.gene22710:CDS |
| GTTGTGTTGAATTTGAACAA+TGG | 0.637607 | 7.4:+878194 | MS.gene22710:CDS |
| GGACGAACCTCTAAATCATG+TGG | 0.640327 | 7.4:+878583 | MS.gene22710:CDS |
| AAGGAAGCCTGCTAATGGAA+GGG | 0.640978 | 7.4:+878562 | MS.gene22710:CDS |
| GAAAGGAGACCTAGGAAGCG+CGG | 0.657593 | 7.4:+878539 | MS.gene22710:CDS |
| GAATATTTCCAAGATGGACA+AGG | 0.676800 | 7.4:+878670 | MS.gene22710:CDS |
| ATACAATGATAATGATTGTG+TGG | 0.679020 | 7.4:-878117 | None:intergenic |
| TAAATCATGTGGAGGCAGAG+AGG | 0.679660 | 7.4:+878594 | MS.gene22710:CDS |
| CGAACCTCTAAATCATGTGG+AGG | 0.682050 | 7.4:+878586 | MS.gene22710:CDS |
| AGGATCTGAACAGCTTACCA+AGG | 0.700634 | 7.4:+879030 | MS.gene22710:CDS |
| ATAGCAACTACCAACCACAA+AGG | 0.712491 | 7.4:+878402 | MS.gene22710:CDS |
| GAATGAAGAAGAGAAAACCA+TGG | 0.720626 | 7.4:+877407 | MS.gene22710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTGACTTAATTACAAAATTA+TGG | - | chr7.4:879009-879028 | None:intergenic | 20.0% |
| !!! | AATTTTGTAATTAAGTCAGA+AGG | + | chr7.4:879010-879029 | MS.gene22710:CDS | 20.0% |
| ! | ATTCTTCATCCAATTTCAAT+TGG | + | chr7.4:877559-877578 | MS.gene22710:CDS | 25.0% |
| ! | ATTGGAATTACGCAATTTAT+TGG | + | chr7.4:877577-877596 | MS.gene22710:CDS | 25.0% |
| ! | TTCAACAAATCAAAGATTTC+AGG | - | chr7.4:878062-878081 | None:intergenic | 25.0% |
| !! | ATACAATGATAATGATTGTG+TGG | - | chr7.4:878120-878139 | None:intergenic | 25.0% |
| !! | ATTACTATCCATTTTCCTAA+TGG | - | chr7.4:878246-878265 | None:intergenic | 25.0% |
| !! | TTCAAATTCAACACAACTTT+TGG | - | chr7.4:878191-878210 | None:intergenic | 25.0% |
| AAAGAAGAAGAAGAAGAAGA+AGG | + | chr7.4:877720-877739 | MS.gene22710:CDS | 30.0% | |
| AACTGTTTATCAAATGAGAG+TGG | + | chr7.4:877474-877493 | MS.gene22710:CDS | 30.0% | |
| ACTAATCGAAACATTCAAAG+AGG | + | chr7.4:878931-878950 | MS.gene22710:CDS | 30.0% | |
| ATTATCATTGTATCCTAGTG+TGG | + | chr7.4:878127-878146 | MS.gene22710:CDS | 30.0% | |
| GAAACAAAGTATGAAGAAGT+GGG | + | chr7.4:877746-877765 | MS.gene22710:CDS | 30.0% | |
| GTTGTGTTGAATTTGAACAA+TGG | + | chr7.4:878194-878213 | MS.gene22710:CDS | 30.0% | |
| TAAAAAGAACATCTCTGTGT+CGG | - | chr7.4:877844-877863 | None:intergenic | 30.0% | |
| TCAAGATGAGGTAATAGTAA+AGG | + | chr7.4:878874-878893 | MS.gene22710:CDS | 30.0% | |
| TGAAACAAAGTATGAAGAAG+TGG | + | chr7.4:877745-877764 | MS.gene22710:CDS | 30.0% | |
| TGCGTAATTCCAATTGAAAT+TGG | - | chr7.4:877571-877590 | None:intergenic | 30.0% | |
| TTGTCCATCTTGGAAATATT+CGG | - | chr7.4:878671-878690 | None:intergenic | 30.0% | |
| ! | ATGTACTTCTTTTTCCCAAA+AGG | + | chr7.4:877870-877889 | MS.gene22710:CDS | 30.0% |
| ! | GAAGAAAGTACAGTTTCAAA+TGG | + | chr7.4:878155-878174 | MS.gene22710:CDS | 30.0% |
| ! | TGTACTTCTTTTTCCCAAAA+GGG | + | chr7.4:877871-877890 | MS.gene22710:CDS | 30.0% |
| !!! | GGTGAATTTTTTGCTTCTAA+TGG | + | chr7.4:878347-878366 | MS.gene22710:CDS | 30.0% |
| !!! | GTTTTAGTACCTACTGATTT+TGG | + | chr7.4:878005-878024 | MS.gene22710:CDS | 30.0% |
| AACTTTCCTAGTGCTAGAAA+TGG | + | chr7.4:878287-878306 | MS.gene22710:CDS | 35.0% | |
| AGTGCTAGAAATGGTATTTG+TGG | + | chr7.4:878296-878315 | MS.gene22710:CDS | 35.0% | |
| CGACTTTCTAAGTCAAAATC+TGG | + | chr7.4:877600-877619 | MS.gene22710:CDS | 35.0% | |
| GAAACTTGCCATTAGGAAAA+TGG | + | chr7.4:878235-878254 | MS.gene22710:CDS | 35.0% | |
| GAATACTAGAGTTTCTCTTC+CGG | + | chr7.4:878832-878851 | MS.gene22710:CDS | 35.0% | |
| GAATATTTCCAAGATGGACA+AGG | + | chr7.4:878670-878689 | MS.gene22710:CDS | 35.0% | |
| GAATGAAGAAGAGAAAACCA+TGG | + | chr7.4:877407-877426 | MS.gene22710:CDS | 35.0% | |
| GATCAATAAAGCGCATGATA+TGG | + | chr7.4:877385-877404 | MS.gene22710:CDS | 35.0% | |
| TATTCAAGCTTCTCAAGATG+AGG | + | chr7.4:878862-878881 | MS.gene22710:CDS | 35.0% | |
| TCAACAACACCAAAATCAGT+AGG | - | chr7.4:878017-878036 | None:intergenic | 35.0% | |
| TGGTGATTACGTTCTTTGTT+GGG | + | chr7.4:877620-877639 | MS.gene22710:CDS | 35.0% | |
| TGTACCGAATATTTCCAAGA+TGG | + | chr7.4:878664-878683 | MS.gene22710:CDS | 35.0% | |
| TTACTGCTTTCGTTCTTTCT+TGG | + | chr7.4:877956-877975 | MS.gene22710:CDS | 35.0% | |
| TTGCTTCTGGTAAACATTTG+TGG | + | chr7.4:877916-877935 | MS.gene22710:CDS | 35.0% | |
| TTTGTAAGGAGTTGGATTCT+CGG | - | chr7.4:879078-879097 | None:intergenic | 35.0% | |
| ! | AAGTTGCATAAAGCTTTTGG+TGG | + | chr7.4:877777-877796 | MS.gene22710:CDS | 35.0% |
| ! | AATGATAATGATTGTGTGGC+AGG | - | chr7.4:878116-878135 | None:intergenic | 35.0% |
| ! | ACAATGGTCGTACACATTTT+AGG | + | chr7.4:878210-878229 | MS.gene22710:CDS | 35.0% |
| ! | ATGGTATTTGTGGTTCTACT+TGG | + | chr7.4:878306-878325 | MS.gene22710:CDS | 35.0% |
| ! | ATGGTGTGAGAAAGGATTTT+AGG | + | chr7.4:878366-878385 | MS.gene22710:CDS | 35.0% |
| ! | CAATGGTCGTACACATTTTA+GGG | + | chr7.4:878211-878230 | MS.gene22710:CDS | 35.0% |
| ! | CAGAAGTTGCATAAAGCTTT+TGG | + | chr7.4:877774-877793 | MS.gene22710:CDS | 35.0% |
| ! | GATGAAGACAATTACGCTTT+TGG | + | chr7.4:877804-877823 | MS.gene22710:CDS | 35.0% |
| ! | TGGTATTTGTGGTTCTACTT+GGG | + | chr7.4:878307-878326 | MS.gene22710:CDS | 35.0% |
| ! | TTCTTTTTCCCAAAAGGGTA+TGG | + | chr7.4:877876-877895 | MS.gene22710:CDS | 35.0% |
| !! | CAAATACCATTTCTAGCACT+AGG | - | chr7.4:878296-878315 | None:intergenic | 35.0% |
| !! | CCAATGCAAATTGACTTTTC+CGG | + | chr7.4:878431-878450 | MS.gene22710:CDS | 35.0% |
| !! | GTTTCGATTAGTTTCGAAAC+AGG | - | chr7.4:878923-878942 | None:intergenic | 35.0% |
| !!! | GATTTTGGTGTTGTTGAGTT+GGG | + | chr7.4:878020-878039 | MS.gene22710:CDS | 35.0% |
| !!! | TGATTTTGGTGTTGTTGAGT+TGG | + | chr7.4:878019-878038 | MS.gene22710:CDS | 35.0% |
| ACCAGAAGCAAAACACTTAC+CGG | - | chr7.4:877907-877926 | None:intergenic | 40.0% | |
| AGAGAACCAAACGAAGAAGA+AGG | + | chr7.4:877657-877676 | MS.gene22710:CDS | 40.0% | |
| AGTTCCGATTCAGCAATAAC+CGG | - | chr7.4:878485-878504 | None:intergenic | 40.0% | |
| ATAGCAACTACCAACCACAA+AGG | + | chr7.4:878402-878421 | MS.gene22710:CDS | 40.0% | |
| ATTCGGTACAACAGCTCTTA+AGG | - | chr7.4:878654-878673 | None:intergenic | 40.0% | |
| ATTTGGAAGCAGTACTTCCA+GGG | + | chr7.4:878772-878791 | MS.gene22710:CDS | 40.0% | |
| CCGGAAAAGTCAATTTGCAT+TGG | - | chr7.4:878434-878453 | None:intergenic | 40.0% | |
| CTGGTGATTACGTTCTTTGT+TGG | + | chr7.4:877619-877638 | MS.gene22710:CDS | 40.0% | |
| CTTTCTTCATTGACCACACT+AGG | - | chr7.4:878143-878162 | None:intergenic | 40.0% | |
| GAAGAAGAGAAAACCATGGT+TGG | + | chr7.4:877411-877430 | MS.gene22710:CDS | 40.0% | |
| GAAGCTTGAATATCCACATC+CGG | - | chr7.4:878854-878873 | None:intergenic | 40.0% | |
| GAGTCAGAGAGAGAATCATT+TGG | + | chr7.4:878755-878774 | MS.gene22710:CDS | 40.0% | |
| GTTAGAGAAACTCTGAGTCT+TGG | + | chr7.4:877684-877703 | MS.gene22710:CDS | 40.0% | |
| TAAAGATGCCTTGTCCATCT+TGG | - | chr7.4:878681-878700 | None:intergenic | 40.0% | |
| TCAAGCGAAACTCAAGATCA+TGG | + | chr7.4:878733-878752 | MS.gene22710:CDS | 40.0% | |
| TCTTTCTTGGCTAAATCTGC+TGG | + | chr7.4:877969-877988 | MS.gene22710:CDS | 40.0% | |
| TGCTTCTAATGGTGTGAGAA+AGG | + | chr7.4:878358-878377 | MS.gene22710:CDS | 40.0% | |
| TTAGGGAGAAACTTGCCATT+AGG | + | chr7.4:878228-878247 | MS.gene22710:CDS | 40.0% | |
| TTGTAAGGAGTTGGATTCTC+GGG | - | chr7.4:879077-879096 | None:intergenic | 40.0% | |
| ! | AGTTTGGGTTTGTAAGGAGT+TGG | - | chr7.4:879086-879105 | None:intergenic | 40.0% |
| ! | ATGGACAAGGCATCTTTACT+TGG | + | chr7.4:878683-878702 | MS.gene22710:CDS | 40.0% |
| ! | GGACAAAGTTTGGGTTTGTA+AGG | - | chr7.4:879092-879111 | None:intergenic | 40.0% |
| ! | GGTATTTGTGGTTCTACTTG+GGG | + | chr7.4:878308-878327 | MS.gene22710:CDS | 40.0% |
| !! | TTTTTCCCAAAAGGGTATGG+TGG | + | chr7.4:877879-877898 | MS.gene22710:CDS | 40.0% |
| AAGGAAGCCTGCTAATGGAA+GGG | + | chr7.4:878562-878581 | MS.gene22710:CDS | 45.0% | |
| AATAACCGGTCTCGCAGAAT+TGG | - | chr7.4:878471-878490 | None:intergenic | 45.0% | |
| ACGTTCTTTGTTGGGCAGAT+GGG | + | chr7.4:877628-877647 | MS.gene22710:CDS | 45.0% | |
| ACTCCACCTTCTTCTTCGTT+TGG | - | chr7.4:877666-877685 | None:intergenic | 45.0% | |
| AGGATCTGAACAGCTTACCA+AGG | + | chr7.4:879030-879049 | MS.gene22710:CDS | 45.0% | |
| CATTTGGAAGCAGTACTTCC+AGG | + | chr7.4:878771-878790 | MS.gene22710:CDS | 45.0% | |
| CCAGAAGCAAAACACTTACC+GGG | - | chr7.4:877906-877925 | None:intergenic | 45.0% | |
| CGAACCTCTAAATCATGTGG+AGG | + | chr7.4:878586-878605 | MS.gene22710:CDS | 45.0% | |
| CTGATCAACCTAGCGATGAA+AGG | + | chr7.4:878522-878541 | MS.gene22710:CDS | 45.0% | |
| GAACCAAACGAAGAAGAAGG+TGG | + | chr7.4:877660-877679 | MS.gene22710:CDS | 45.0% | |
| GAGACCGGTTATTGCTGAAT+CGG | + | chr7.4:878478-878497 | MS.gene22710:CDS | 45.0% | |
| GGACGAACCTCTAAATCATG+TGG | + | chr7.4:878583-878602 | MS.gene22710:CDS | 45.0% | |
| TAAATCATGTGGAGGCAGAG+AGG | + | chr7.4:878594-878613 | MS.gene22710:CDS | 45.0% | |
| TACGTTCTTTGTTGGGCAGA+TGG | + | chr7.4:877627-877646 | MS.gene22710:CDS | 45.0% | |
| TAGAGTTTCTCTTCCGGATG+TGG | + | chr7.4:878838-878857 | MS.gene22710:CDS | 45.0% | |
| TCTACTTGGGGAGTGAATCA+AGG | + | chr7.4:878320-878339 | MS.gene22710:CDS | 45.0% | |
| TCTGAGTCTTGGCATAGAAG+AGG | + | chr7.4:877695-877714 | MS.gene22710:CDS | 45.0% | |
| TCTGCCTCCACATGATTTAG+AGG | - | chr7.4:878593-878612 | None:intergenic | 45.0% | |
| TGCTGCAATCAACTTGTCCT+TGG | - | chr7.4:879050-879069 | None:intergenic | 45.0% | |
| ! | ACTTTTCCGGAGCAAATTCG+AGG | + | chr7.4:878444-878463 | MS.gene22710:CDS | 45.0% |
| ! | CTTTTCCGGAGCAAATTCGA+GGG | + | chr7.4:878445-878464 | MS.gene22710:CDS | 45.0% |
| !! | ACATCTCTGTGTCGGTTACA+CGG | - | chr7.4:877836-877855 | None:intergenic | 45.0% |
| !! | GAGAGTGGATTGATTGCTGT+TGG | + | chr7.4:877489-877508 | MS.gene22710:CDS | 45.0% |
| !! | GGAACTTGTTGCTGATGTTG+AGG | + | chr7.4:878499-878518 | MS.gene22710:CDS | 45.0% |
| ACCAAGAACAGCTCCAACCA+TGG | - | chr7.4:877427-877446 | None:intergenic | 50.0% | |
| ACCATGGTTGGAGCTGTTCT+TGG | + | chr7.4:877423-877442 | MS.gene22710:CDS | 50.0% | |
| AGTACTTCCAGGGATGGATC+AGG | + | chr7.4:878782-878801 | MS.gene22710:CDS | 50.0% | |
| CTAGCGATGAAAGGAGACCT+AGG | + | chr7.4:878531-878550 | MS.gene22710:CDS | 50.0% | |
| CTAGGTCTCCTTTCATCGCT+AGG | - | chr7.4:878533-878552 | None:intergenic | 50.0% | |
| GAAGGAAGCCTGCTAATGGA+AGG | + | chr7.4:878561-878580 | MS.gene22710:CDS | 50.0% | |
| TGGGGAGTGAATCAAGGTCA+AGG | + | chr7.4:878326-878345 | MS.gene22710:CDS | 50.0% | |
| TTGGCATCTGCCTTTGTGGT+TGG | - | chr7.4:878415-878434 | None:intergenic | 50.0% | |
| ! | ATTGGCCCTCGAATTTGCTC+CGG | - | chr7.4:878453-878472 | None:intergenic | 50.0% |
| ! | CCCGGTAAGTGTTTTGCTTC+TGG | + | chr7.4:877903-877922 | MS.gene22710:CDS | 50.0% |
| ! | TGCATTGGCATCTGCCTTTG+TGG | - | chr7.4:878419-878438 | None:intergenic | 50.0% |
| !! | TGTTCTTGGTGCTCGAGCTT+TGG | + | chr7.4:877437-877456 | MS.gene22710:CDS | 50.0% |
| ATGTGGAGGCAGAGAGGCAA+AGG | + | chr7.4:878600-878619 | MS.gene22710:CDS | 55.0% | |
| GAAAGGAGACCTAGGAAGCG+CGG | + | chr7.4:878539-878558 | MS.gene22710:CDS | 55.0% | |
| GGAAGCAGTACTTCCAGGGA+TGG | + | chr7.4:878776-878795 | MS.gene22710:CDS | 55.0% | |
| GGTTCGTCCCTTCCATTAGC+AGG | - | chr7.4:878572-878591 | None:intergenic | 55.0% | |
| ! | CGGGTCCACCATACCCTTTT+GGG | - | chr7.4:877887-877906 | None:intergenic | 55.0% |
| !! | CCAAAAGGGTATGGTGGACC+CGG | + | chr7.4:877885-877904 | MS.gene22710:CDS | 55.0% |
| !! | CTGTGTCGGTTACACGGTCA+AGG | - | chr7.4:877830-877849 | None:intergenic | 55.0% |
| CGAGTTGCCTGATCCATCCC+TGG | - | chr7.4:878792-878811 | None:intergenic | 60.0% | |
| CGCGGAAGGAAGCCTGCTAA+TGG | + | chr7.4:878557-878576 | MS.gene22710:CDS | 60.0% | |
| GAGGGCCAATTCTGCGAGAC+CGG | + | chr7.4:878463-878482 | MS.gene22710:CDS | 60.0% | |
| ! | CCGGGTCCACCATACCCTTT+TGG | - | chr7.4:877888-877907 | None:intergenic | 60.0% |
| GGCTTCCTTCCGCGCTTCCT+AGG | - | chr7.4:878551-878570 | None:intergenic | 65.0% | |
| ! | GGAGACCTAGGAAGCGCGGA+AGG | + | chr7.4:878543-878562 | MS.gene22710:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 877381 | 879117 | 877381 | ID=MS.gene22710 |
| chr7.4 | mRNA | 877381 | 879117 | 877381 | ID=MS.gene22710.t1;Parent=MS.gene22710 |
| chr7.4 | exon | 877381 | 879117 | 877381 | ID=MS.gene22710.t1.exon1;Parent=MS.gene22710.t1 |
| chr7.4 | CDS | 877381 | 879117 | 877381 | ID=cds.MS.gene22710.t1;Parent=MS.gene22710.t1 |
| Gene Sequence |
| Protein sequence |
