Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020496.t1 | XP_003630911.1 | 96.5 | 170 | 5 | 1 | 1 | 170 | 1 | 169 | 4.20E-96 | 360.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020496.t1 | Q9LQU4 | 63.9 | 147 | 50 | 3 | 26 | 170 | 7 | 152 | 1.7e-50 | 200.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020496.t1 | G7LAH9 | 96.5 | 170 | 5 | 1 | 1 | 170 | 1 | 169 | 3.0e-96 | 360.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene020496 | MS.gene047654 | PPI |
| MS.gene020496 | MS.gene015684 | PPI |
| MS.gene020496 | MS.gene015683 | PPI |
| MS.gene29964 | MS.gene020496 | PPI |
| MS.gene020496 | MS.gene041113 | PPI |
| MS.gene020496 | MS.gene010381 | PPI |
| MS.gene020495 | MS.gene020496 | PPI |
| MS.gene020496 | MS.gene29965 | PPI |
| MS.gene020496 | MS.gene020495 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020496.t1 | MTR_8g104890 | 96.471 | 170 | 5 | 1 | 1 | 170 | 1 | 169 | 1.78e-121 | 339 |
| MS.gene020496.t1 | MTR_5g017650 | 60.795 | 176 | 49 | 4 | 1 | 156 | 1 | 176 | 4.17e-68 | 205 |
| MS.gene020496.t1 | MTR_8g104870 | 63.804 | 163 | 41 | 3 | 12 | 156 | 11 | 173 | 4.30e-66 | 200 |
| MS.gene020496.t1 | MTR_4g086330 | 51.205 | 166 | 70 | 2 | 14 | 170 | 34 | 197 | 7.70e-54 | 169 |
| MS.gene020496.t1 | MTR_8g104830 | 50.714 | 140 | 66 | 3 | 30 | 167 | 4 | 142 | 7.35e-43 | 140 |
| MS.gene020496.t1 | MTR_4g086320 | 56.667 | 120 | 51 | 1 | 25 | 144 | 42 | 160 | 1.18e-42 | 140 |
| MS.gene020496.t1 | MTR_2g101660 | 33.728 | 169 | 109 | 1 | 5 | 170 | 3 | 171 | 3.94e-31 | 110 |
| MS.gene020496.t1 | MTR_6g084940 | 43.066 | 137 | 74 | 3 | 34 | 170 | 17 | 149 | 1.37e-29 | 106 |
| MS.gene020496.t1 | MTR_1g075550 | 53.509 | 114 | 52 | 1 | 34 | 147 | 11 | 123 | 4.08e-26 | 97.1 |
| MS.gene020496.t1 | MTR_5g008240 | 39.416 | 137 | 68 | 4 | 21 | 142 | 27 | 163 | 4.81e-24 | 93.2 |
| MS.gene020496.t1 | MTR_5g008240 | 37.956 | 137 | 70 | 3 | 21 | 142 | 69 | 205 | 1.02e-23 | 93.2 |
| MS.gene020496.t1 | MTR_2g101660 | 36.585 | 123 | 75 | 1 | 51 | 170 | 1 | 123 | 1.11e-23 | 90.5 |
| MS.gene020496.t1 | MTR_5g008240 | 37.956 | 137 | 70 | 3 | 21 | 142 | 93 | 229 | 1.32e-23 | 93.6 |
| MS.gene020496.t1 | MTR_7g044840 | 31.655 | 139 | 65 | 3 | 28 | 137 | 53 | 190 | 4.94e-19 | 81.3 |
| MS.gene020496.t1 | MTR_0172s0050 | 32.414 | 145 | 64 | 4 | 29 | 140 | 57 | 200 | 8.80e-16 | 72.8 |
| MS.gene020496.t1 | MTR_3g408350 | 28.105 | 153 | 70 | 3 | 19 | 137 | 44 | 190 | 6.01e-15 | 70.1 |
| MS.gene020496.t1 | MTR_5g008240 | 40.741 | 108 | 49 | 4 | 50 | 142 | 38 | 145 | 1.30e-14 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020496.t1 | AT1G14870 | 63.946 | 147 | 50 | 3 | 26 | 170 | 7 | 152 | 3.74e-62 | 189 |
| MS.gene020496.t1 | AT5G35525 | 64.029 | 139 | 48 | 2 | 29 | 166 | 10 | 147 | 1.14e-59 | 182 |
| MS.gene020496.t1 | AT1G14870 | 67.227 | 119 | 39 | 0 | 26 | 144 | 7 | 125 | 1.97e-56 | 174 |
| MS.gene020496.t1 | AT1G14880 | 59.184 | 147 | 57 | 3 | 26 | 170 | 6 | 151 | 3.15e-54 | 169 |
| MS.gene020496.t1 | AT1G68610 | 56.934 | 137 | 56 | 2 | 33 | 166 | 17 | 153 | 6.31e-45 | 145 |
| MS.gene020496.t1 | AT1G49030 | 47.799 | 159 | 72 | 4 | 5 | 160 | 66 | 216 | 1.09e-44 | 147 |
| MS.gene020496.t1 | AT3G18450 | 47.682 | 151 | 72 | 4 | 10 | 160 | 33 | 176 | 4.34e-43 | 142 |
| MS.gene020496.t1 | AT3G18470 | 50.388 | 129 | 59 | 1 | 32 | 160 | 2 | 125 | 1.02e-42 | 139 |
| MS.gene020496.t1 | AT3G18460 | 50.345 | 145 | 65 | 3 | 18 | 162 | 42 | 179 | 1.34e-42 | 140 |
| MS.gene020496.t1 | AT1G58320 | 50.413 | 121 | 56 | 3 | 34 | 153 | 16 | 133 | 9.95e-37 | 124 |
| MS.gene020496.t1 | AT1G52200 | 40.116 | 172 | 93 | 4 | 9 | 170 | 19 | 190 | 1.36e-34 | 120 |
| MS.gene020496.t1 | AT1G52200 | 40.278 | 144 | 78 | 2 | 9 | 144 | 19 | 162 | 4.70e-29 | 106 |
| MS.gene020496.t1 | AT1G68630 | 38.849 | 139 | 80 | 2 | 28 | 162 | 18 | 155 | 2.70e-28 | 103 |
| MS.gene020496.t1 | AT2G40935 | 34.028 | 144 | 73 | 4 | 22 | 144 | 34 | 176 | 1.16e-21 | 87.0 |
| MS.gene020496.t1 | AT2G40935 | 34.028 | 144 | 73 | 4 | 22 | 144 | 34 | 176 | 1.16e-21 | 87.0 |
| MS.gene020496.t1 | AT2G40935 | 34.028 | 144 | 73 | 4 | 22 | 144 | 34 | 176 | 1.16e-21 | 87.0 |
| MS.gene020496.t1 | AT2G40935 | 34.028 | 144 | 73 | 4 | 22 | 144 | 34 | 176 | 1.16e-21 | 87.0 |
| MS.gene020496.t1 | AT2G40935 | 34.028 | 144 | 73 | 4 | 22 | 144 | 34 | 176 | 1.16e-21 | 87.0 |
| MS.gene020496.t1 | AT2G45010 | 33.103 | 145 | 66 | 4 | 28 | 142 | 9 | 152 | 7.62e-20 | 82.4 |
| MS.gene020496.t1 | AT2G45010 | 33.103 | 145 | 66 | 4 | 28 | 142 | 55 | 198 | 8.90e-20 | 83.2 |
| MS.gene020496.t1 | AT5G51400 | 30.921 | 152 | 73 | 5 | 19 | 140 | 47 | 196 | 2.36e-18 | 79.3 |
| MS.gene020496.t1 | AT2G40935 | 31.250 | 144 | 66 | 5 | 22 | 144 | 34 | 165 | 1.21e-15 | 71.2 |
| MS.gene020496.t1 | AT2G40935 | 35.345 | 116 | 53 | 4 | 50 | 144 | 38 | 152 | 1.28e-14 | 68.2 |
| MS.gene020496.t1 | AT2G40935 | 35.345 | 116 | 53 | 4 | 50 | 144 | 38 | 152 | 1.28e-14 | 68.2 |
| MS.gene020496.t1 | AT2G40935 | 35.345 | 116 | 53 | 4 | 50 | 144 | 38 | 152 | 1.28e-14 | 68.2 |
Find 47 sgRNAs with CRISPR-Local
Find 66 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACCATTCCTGGTTGGCATT+AGG | 0.310976 | 4.1:+1932976 | None:intergenic |
| GCCACCAGCCACCGGTTTCC+CGG | 0.332845 | 4.1:-1933019 | MS.gene020496:CDS |
| CCTGGTTGGCATTAGGTTGT+TGG | 0.355979 | 4.1:+1932983 | None:intergenic |
| ATAGACCCGTGGACCATTCC+TGG | 0.365914 | 4.1:+1932965 | None:intergenic |
| CGTGGATTTGACATGGAACT+TGG | 0.398558 | 4.1:-1932458 | MS.gene020496:intron |
| GGGTCTATTTGACTGCTTCT+CGG | 0.401120 | 4.1:-1932950 | MS.gene020496:CDS |
| ATTTGTTGTGTGACGGGTTG+TGG | 0.418139 | 4.1:-1932617 | MS.gene020496:CDS |
| TGGTGTCCATGCATCACCTT+TGG | 0.426284 | 4.1:-1932799 | MS.gene020496:CDS |
| TGTTGGTAGCCGACGTTCAC+CGG | 0.431018 | 4.1:+1933000 | None:intergenic |
| GCCGACGTTCACCGGGAAAC+CGG | 0.448178 | 4.1:+1933008 | None:intergenic |
| TTGCAGCTTGTGCTGTAAGC+GGG | 0.457897 | 4.1:-1932655 | MS.gene020496:intron |
| TACATTAATTTGTTGTGTGA+CGG | 0.462544 | 4.1:-1932624 | MS.gene020496:CDS |
| TGCTGGAGCTGTTGGTGCCA+TGG | 0.464678 | 4.1:+1932041 | None:intergenic |
| TGTTCAACTGCTGGAGCTGT+TGG | 0.477230 | 4.1:+1932033 | None:intergenic |
| CGAGTCATGTGTTCAACTGC+TGG | 0.481564 | 4.1:+1932024 | None:intergenic |
| ACATTAATTTGTTGTGTGAC+GGG | 0.489462 | 4.1:-1932623 | MS.gene020496:CDS |
| AAATGTGGCACAAGGGAACC+AGG | 0.489547 | 4.1:-1932070 | MS.gene020496:CDS |
| GTGGCTGGTGGCTGATTGTA+CGG | 0.517478 | 4.1:+1933030 | None:intergenic |
| TTGGTGCCATGGCTACTCCC+TGG | 0.530182 | 4.1:+1932052 | None:intergenic |
| AACCTAATGCCAACCAGGAA+TGG | 0.530457 | 4.1:-1932978 | MS.gene020496:CDS |
| TTCACCGGGAAACCGGTGGC+TGG | 0.538277 | 4.1:+1933015 | None:intergenic |
| GTTGGTAGCCGACGTTCACC+GGG | 0.542435 | 4.1:+1933001 | None:intergenic |
| GCCAACCAGGAATGGTCCAC+GGG | 0.546652 | 4.1:-1932970 | MS.gene020496:CDS |
| ACCGGGAAACCGGTGGCTGG+TGG | 0.560600 | 4.1:+1933018 | None:intergenic |
| TACAATCAGCCACCAGCCAC+CGG | 0.567328 | 4.1:-1933027 | MS.gene020496:CDS |
| ATTGCAGCTTGTGCTGTAAG+CGG | 0.567979 | 4.1:-1932656 | MS.gene020496:intron |
| AAATTGGCTATAGGGTGGCA+TGG | 0.569669 | 4.1:-1932093 | MS.gene020496:intron |
| CCAACAACCTAATGCCAACC+AGG | 0.571791 | 4.1:-1932983 | MS.gene020496:CDS |
| TGGCATGGAAATGTGGCACA+AGG | 0.574561 | 4.1:-1932078 | MS.gene020496:CDS |
| TGCCAACCAGGAATGGTCCA+CGG | 0.582618 | 4.1:-1932971 | MS.gene020496:CDS |
| TGCAGCTTGTGCTGTAAGCG+GGG | 0.590429 | 4.1:-1932654 | MS.gene020496:intron |
| AATCTCAGCAATTCGTCCAA+AGG | 0.597233 | 4.1:+1932783 | None:intergenic |
| ATTCGTCCAAAGGTGATGCA+TGG | 0.598061 | 4.1:+1932793 | None:intergenic |
| TGAAAACCGTGGATTTGACA+TGG | 0.599587 | 4.1:-1932465 | MS.gene020496:CDS |
| ACCCGTGGACCATTCCTGGT+TGG | 0.600890 | 4.1:+1932969 | None:intergenic |
| AATTGCTGAGATTGTTGACA+AGG | 0.603304 | 4.1:-1932773 | MS.gene020496:CDS |
| TATAGGGTGGCATGGAAATG+TGG | 0.605383 | 4.1:-1932085 | MS.gene020496:intron |
| ACCGGTTTCCCGGTGAACGT+CGG | 0.612556 | 4.1:-1933009 | MS.gene020496:CDS |
| AGGGAACCAGGGAGTAGCCA+TGG | 0.614002 | 4.1:-1932058 | MS.gene020496:CDS |
| CAAGTTCCATGTCAAATCCA+CGG | 0.615456 | 4.1:+1932459 | None:intergenic |
| AATGTGGCACAAGGGAACCA+GGG | 0.650557 | 4.1:-1932069 | MS.gene020496:CDS |
| GGCATGGAAATGTGGCACAA+GGG | 0.652763 | 4.1:-1932077 | MS.gene020496:CDS |
| GACGTTCACCGGGAAACCGG+TGG | 0.653777 | 4.1:+1933011 | None:intergenic |
| TGAACTAAGCAATCACAACA+AGG | 0.663046 | 4.1:+1932533 | None:intergenic |
| ATTGCTGAGATTGTTGACAA+GGG | 0.678367 | 4.1:-1932772 | MS.gene020496:CDS |
| TATCGTGAGCTTGAAAACCG+TGG | 0.692905 | 4.1:-1932476 | MS.gene020496:CDS |
| GAAGCAGTCAAATAGACCCG+TGG | 0.701710 | 4.1:+1932954 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTATTAAAATTTAGAAG+AGG | + | chr4.1:1932218-1932237 | None:intergenic | 10.0% |
| !!! | TAAATTTCATTTCTTTTTTT+AGG | - | chr4.1:1932245-1932264 | MS.gene020496:intron | 10.0% |
| !!! | TCTCTTAAATTTTTTATTTA+AGG | - | chr4.1:1932764-1932783 | MS.gene020496:CDS | 10.0% |
| !!! | ATCTTAATTCTTTTATCTTT+TGG | - | chr4.1:1932679-1932698 | MS.gene020496:intron | 15.0% |
| !! | AAGAGGAATTAATTAATGAA+CGG | + | chr4.1:1932201-1932220 | None:intergenic | 20.0% |
| !! | CTTGTAAGATATTCATTAAT+TGG | - | chr4.1:1932336-1932355 | MS.gene020496:intron | 20.0% |
| !!! | ATTTATTTGAAATTGGCTAT+AGG | - | chr4.1:1932978-1932997 | MS.gene020496:CDS | 20.0% |
| !!! | TTTATTTGAAATTGGCTATA+GGG | - | chr4.1:1932979-1932998 | MS.gene020496:CDS | 20.0% |
| ! | GTTCTAATTACCACTTAATT+TGG | - | chr4.1:1932174-1932193 | MS.gene020496:intron | 25.0% |
| !! | ATTGTTGTCTCATTTTGTTA+CGG | + | chr4.1:1932510-1932529 | None:intergenic | 25.0% |
| !!! | TACATTAATTTGTTGTGTGA+CGG | - | chr4.1:1932456-1932475 | MS.gene020496:intron | 25.0% |
| ! | GGTTGTTGAAATTTTGAACT+TGG | + | chr4.1:1932032-1932051 | None:intergenic | 30.0% |
| ! | TCGACAATTCAATGTTTCTA+TGG | - | chr4.1:1932722-1932741 | MS.gene020496:intron | 30.0% |
| ! | TGTTGAAATTTTGAACTTGG+AGG | + | chr4.1:1932029-1932048 | None:intergenic | 30.0% |
| !! | ACATTAATTTGTTGTGTGAC+GGG | - | chr4.1:1932457-1932476 | MS.gene020496:intron | 30.0% |
| AATGAACGGTCCAAATTAAG+TGG | + | chr4.1:1932187-1932206 | None:intergenic | 35.0% | |
| AATTGCTGAGATTGTTGACA+AGG | - | chr4.1:1932307-1932326 | MS.gene020496:intron | 35.0% | |
| ATTGCTGAGATTGTTGACAA+GGG | - | chr4.1:1932308-1932327 | MS.gene020496:intron | 35.0% | |
| TGAACTAAGCAATCACAACA+AGG | + | chr4.1:1932550-1932569 | None:intergenic | 35.0% | |
| ! | ATTTGAAATTGGCTATAGGG+TGG | - | chr4.1:1932982-1933001 | MS.gene020496:CDS | 35.0% |
| !!! | TTTTAGGTTGCATAACGTTC+TGG | - | chr4.1:1932261-1932280 | MS.gene020496:intron | 35.0% |
| AATCTCAGCAATTCGTCCAA+AGG | + | chr4.1:1932300-1932319 | None:intergenic | 40.0% | |
| ATTTGTACCATTGTCGCATC+TGG | - | chr4.1:1932912-1932931 | MS.gene020496:intron | 40.0% | |
| CAAGTTCCATGTCAAATCCA+CGG | + | chr4.1:1932624-1932643 | None:intergenic | 40.0% | |
| TGAAAACCGTGGATTTGACA+TGG | - | chr4.1:1932615-1932634 | MS.gene020496:CDS | 40.0% | |
| AAATTGGCTATAGGGTGGCA+TGG | - | chr4.1:1932987-1933006 | MS.gene020496:CDS | 45.0% | |
| AACCTAATGCCAACCAGGAA+TGG | - | chr4.1:1932102-1932121 | MS.gene020496:intron | 45.0% | |
| AACTCATCCAGATGCGACAA+TGG | + | chr4.1:1932922-1932941 | None:intergenic | 45.0% | |
| ATTCGTCCAAAGGTGATGCA+TGG | + | chr4.1:1932290-1932309 | None:intergenic | 45.0% | |
| ATTGCAGCTTGTGCTGTAAG+CGG | - | chr4.1:1932424-1932443 | MS.gene020496:intron | 45.0% | |
| CGTGGATTTGACATGGAACT+TGG | - | chr4.1:1932622-1932641 | MS.gene020496:CDS | 45.0% | |
| GGGTCTATTTGACTGCTTCT+CGG | - | chr4.1:1932130-1932149 | MS.gene020496:intron | 45.0% | |
| TATAGGGTGGCATGGAAATG+TGG | - | chr4.1:1932995-1933014 | MS.gene020496:CDS | 45.0% | |
| TATCGTGAGCTTGAAAACCG+TGG | - | chr4.1:1932604-1932623 | MS.gene020496:CDS | 45.0% | |
| !! | ATTTGTTGTGTGACGGGTTG+TGG | - | chr4.1:1932463-1932482 | MS.gene020496:CDS | 45.0% |
| !!! | TTAATTTATTTATTTGAAAT+TGG | - | chr4.1:1932971-1932990 | MS.gene020496:CDS | 5.0% |
| AAATGTGGCACAAGGGAACC+AGG | - | chr4.1:1933010-1933029 | MS.gene020496:CDS | 50.0% | |
| AATGTGGCACAAGGGAACCA+GGG | - | chr4.1:1933011-1933030 | MS.gene020496:CDS | 50.0% | |
| CCAACAACCTAATGCCAACC+AGG | - | chr4.1:1932097-1932116 | MS.gene020496:intron | 50.0% | |
| CGAGTCATGTGTTCAACTGC+TGG | + | chr4.1:1933059-1933078 | None:intergenic | 50.0% | |
| GAAGCAGTCAAATAGACCCG+TGG | + | chr4.1:1932129-1932148 | None:intergenic | 50.0% | |
| GACCATTCCTGGTTGGCATT+AGG | + | chr4.1:1932107-1932126 | None:intergenic | 50.0% | |
| GGCATGGAAATGTGGCACAA+GGG | - | chr4.1:1933003-1933022 | MS.gene020496:CDS | 50.0% | |
| TGGCATGGAAATGTGGCACA+AGG | - | chr4.1:1933002-1933021 | MS.gene020496:CDS | 50.0% | |
| TGGTGTCCATGCATCACCTT+TGG | - | chr4.1:1932281-1932300 | MS.gene020496:intron | 50.0% | |
| TGTTCAACTGCTGGAGCTGT+TGG | + | chr4.1:1933050-1933069 | None:intergenic | 50.0% | |
| TTGCAGCTTGTGCTGTAAGC+GGG | - | chr4.1:1932425-1932444 | MS.gene020496:intron | 50.0% | |
| ! | CCTGGTTGGCATTAGGTTGT+TGG | + | chr4.1:1932100-1932119 | None:intergenic | 50.0% |
| ATAGACCCGTGGACCATTCC+TGG | + | chr4.1:1932118-1932137 | None:intergenic | 55.0% | |
| GTGGCTGGTGGCTGATTGTA+CGG | + | chr4.1:1932053-1932072 | None:intergenic | 55.0% | |
| TACAATCAGCCACCAGCCAC+CGG | - | chr4.1:1932053-1932072 | MS.gene020496:CDS | 55.0% | |
| TGCAGCTTGTGCTGTAAGCG+GGG | - | chr4.1:1932426-1932445 | MS.gene020496:intron | 55.0% | |
| TGCCAACCAGGAATGGTCCA+CGG | - | chr4.1:1932109-1932128 | MS.gene020496:intron | 55.0% | |
| !! | TGTTGGTAGCCGACGTTCAC+CGG | + | chr4.1:1932083-1932102 | None:intergenic | 55.0% |
| ACCCGTGGACCATTCCTGGT+TGG | + | chr4.1:1932114-1932133 | None:intergenic | 60.0% | |
| AGGGAACCAGGGAGTAGCCA+TGG | - | chr4.1:1933022-1933041 | MS.gene020496:CDS | 60.0% | |
| GCCAACCAGGAATGGTCCAC+GGG | - | chr4.1:1932110-1932129 | MS.gene020496:intron | 60.0% | |
| ! | ACCGGTTTCCCGGTGAACGT+CGG | - | chr4.1:1932071-1932090 | MS.gene020496:CDS | 60.0% |
| !! | GTTGGTAGCCGACGTTCACC+GGG | + | chr4.1:1932082-1932101 | None:intergenic | 60.0% |
| !! | TGCTGGAGCTGTTGGTGCCA+TGG | + | chr4.1:1933042-1933061 | None:intergenic | 60.0% |
| !! | TTGGTGCCATGGCTACTCCC+TGG | + | chr4.1:1933031-1933050 | None:intergenic | 60.0% |
| GACGTTCACCGGGAAACCGG+TGG | + | chr4.1:1932072-1932091 | None:intergenic | 65.0% | |
| GCCGACGTTCACCGGGAAAC+CGG | + | chr4.1:1932075-1932094 | None:intergenic | 65.0% | |
| TTCACCGGGAAACCGGTGGC+TGG | + | chr4.1:1932068-1932087 | None:intergenic | 65.0% | |
| ACCGGGAAACCGGTGGCTGG+TGG | + | chr4.1:1932065-1932084 | None:intergenic | 70.0% | |
| !! | GCCACCAGCCACCGGTTTCC+CGG | - | chr4.1:1932061-1932080 | MS.gene020496:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 1932020 | 1933082 | 1932020 | ID=MS.gene020496 |
| chr4.1 | mRNA | 1932020 | 1933082 | 1932020 | ID=MS.gene020496.t1;Parent=MS.gene020496 |
| chr4.1 | exon | 1932938 | 1933082 | 1932938 | ID=MS.gene020496.t1.exon1;Parent=MS.gene020496.t1 |
| chr4.1 | CDS | 1932938 | 1933082 | 1932938 | ID=cds.MS.gene020496.t1;Parent=MS.gene020496.t1 |
| chr4.1 | exon | 1932764 | 1932835 | 1932764 | ID=MS.gene020496.t1.exon2;Parent=MS.gene020496.t1 |
| chr4.1 | CDS | 1932764 | 1932835 | 1932764 | ID=cds.MS.gene020496.t1;Parent=MS.gene020496.t1 |
| chr4.1 | exon | 1932459 | 1932671 | 1932459 | ID=MS.gene020496.t1.exon3;Parent=MS.gene020496.t1 |
| chr4.1 | CDS | 1932459 | 1932671 | 1932459 | ID=cds.MS.gene020496.t1;Parent=MS.gene020496.t1 |
| chr4.1 | exon | 1932020 | 1932102 | 1932020 | ID=MS.gene020496.t1.exon4;Parent=MS.gene020496.t1 |
| chr4.1 | CDS | 1932020 | 1932102 | 1932020 | ID=cds.MS.gene020496.t1;Parent=MS.gene020496.t1 |
| Gene Sequence |
| Protein sequence |
