Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020984.t1 | XP_003618072.2 | 95.1 | 679 | 31 | 2 | 1 | 678 | 1 | 678 | 0.00E+00 | 1203.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020984.t1 | Q8VYZ0 | 62.6 | 601 | 199 | 8 | 8 | 590 | 7 | 599 | 9.2e-220 | 764.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020984.t1 | G7K0P6 | 95.1 | 679 | 31 | 2 | 1 | 678 | 1 | 678 | 0.0e+00 | 1203.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene034581 | MS.gene020984 | PPI |
| MS.gene015803 | MS.gene020984 | PPI |
| MS.gene020984 | MS.gene39153 | PPI |
| MS.gene39153 | MS.gene020984 | PPI |
| MS.gene38118 | MS.gene020984 | PPI |
| MS.gene049074 | MS.gene020984 | PPI |
| MS.gene017484 | MS.gene020984 | PPI |
| MS.gene020984 | MS.gene87801 | PPI |
| MS.gene066358 | MS.gene020984 | PPI |
| MS.gene066359 | MS.gene020984 | PPI |
| MS.gene020984 | MS.gene05870 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020984.t1 | MTR_5g098680 | 95.287 | 679 | 30 | 2 | 1 | 678 | 1 | 678 | 0.0 | 1281 |
| MS.gene020984.t1 | MTR_8g102580 | 81.536 | 677 | 114 | 6 | 4 | 678 | 1 | 668 | 0.0 | 1102 |
| MS.gene020984.t1 | MTR_3g114910 | 59.101 | 445 | 104 | 6 | 36 | 480 | 25 | 391 | 1.71e-180 | 519 |
| MS.gene020984.t1 | MTR_6g053210 | 40.517 | 348 | 75 | 5 | 52 | 399 | 10 | 225 | 5.46e-67 | 223 |
| MS.gene020984.t1 | MTR_6g053210 | 58.228 | 79 | 32 | 1 | 600 | 678 | 233 | 310 | 4.47e-17 | 83.2 |
| MS.gene020984.t1 | MTR_6g061270 | 35.789 | 190 | 104 | 7 | 266 | 443 | 223 | 406 | 1.45e-21 | 100 |
| MS.gene020984.t1 | MTR_6g061200 | 33.333 | 195 | 112 | 6 | 266 | 448 | 223 | 411 | 1.91e-20 | 96.3 |
| MS.gene020984.t1 | MTR_7g084090 | 35.602 | 191 | 104 | 7 | 266 | 443 | 285 | 469 | 3.42e-20 | 95.5 |
| MS.gene020984.t1 | MTR_7g084090 | 35.602 | 191 | 104 | 7 | 266 | 443 | 285 | 469 | 4.38e-20 | 95.5 |
| MS.gene020984.t1 | MTR_1g035420 | 37.179 | 156 | 85 | 3 | 266 | 414 | 217 | 366 | 1.45e-18 | 90.5 |
| MS.gene020984.t1 | MTR_8g070070 | 37.342 | 158 | 85 | 4 | 266 | 414 | 325 | 477 | 3.39e-16 | 83.2 |
| MS.gene020984.t1 | MTR_8g071030 | 36.076 | 158 | 87 | 4 | 266 | 414 | 305 | 457 | 6.03e-16 | 82.4 |
| MS.gene020984.t1 | MTR_8g070075 | 34.810 | 158 | 89 | 3 | 266 | 414 | 318 | 470 | 1.14e-15 | 81.3 |
| MS.gene020984.t1 | MTR_4g010550 | 34.615 | 156 | 85 | 4 | 266 | 415 | 49 | 193 | 1.24e-15 | 80.5 |
| MS.gene020984.t1 | MTR_7g088370 | 32.716 | 162 | 91 | 4 | 266 | 419 | 263 | 414 | 6.47e-15 | 79.0 |
| MS.gene020984.t1 | MTR_5g013420 | 33.333 | 153 | 91 | 3 | 266 | 415 | 643 | 787 | 1.58e-14 | 78.2 |
| MS.gene020984.t1 | MTR_5g013420 | 33.333 | 153 | 91 | 3 | 266 | 415 | 643 | 787 | 1.58e-14 | 78.2 |
| MS.gene020984.t1 | MTR_1g035400 | 34.177 | 158 | 89 | 5 | 266 | 414 | 134 | 285 | 1.10e-12 | 71.6 |
| MS.gene020984.t1 | MTR_6g044690 | 32.911 | 158 | 85 | 5 | 266 | 415 | 137 | 281 | 9.87e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020984.t1 | AT1G57820 | 61.059 | 642 | 224 | 8 | 7 | 630 | 6 | 639 | 0.0 | 787 |
| MS.gene020984.t1 | AT1G57820 | 61.059 | 642 | 224 | 8 | 7 | 630 | 6 | 639 | 0.0 | 787 |
| MS.gene020984.t1 | AT1G57820 | 60.592 | 642 | 224 | 9 | 7 | 630 | 6 | 636 | 0.0 | 776 |
| MS.gene020984.t1 | AT5G39550 | 60.461 | 607 | 207 | 10 | 4 | 600 | 3 | 586 | 0.0 | 724 |
| MS.gene020984.t1 | AT1G66040 | 61.371 | 598 | 201 | 9 | 4 | 591 | 3 | 580 | 0.0 | 718 |
| MS.gene020984.t1 | AT1G66050 | 61.371 | 598 | 201 | 9 | 4 | 591 | 3 | 580 | 0.0 | 718 |
| MS.gene020984.t1 | AT1G57800 | 54.449 | 663 | 260 | 14 | 7 | 635 | 6 | 660 | 0.0 | 694 |
| MS.gene020984.t1 | AT1G57800 | 54.079 | 662 | 260 | 14 | 7 | 635 | 6 | 656 | 0.0 | 686 |
| MS.gene020984.t1 | AT4G08590 | 52.844 | 422 | 170 | 8 | 60 | 467 | 24 | 430 | 6.88e-152 | 448 |
| MS.gene020984.t1 | AT4G08590 | 53.302 | 424 | 166 | 10 | 60 | 467 | 24 | 431 | 8.77e-151 | 445 |
| MS.gene020984.t1 | AT4G08590 | 53.041 | 411 | 161 | 10 | 60 | 454 | 24 | 418 | 2.36e-144 | 427 |
| MS.gene020984.t1 | AT4G08590 | 52.267 | 375 | 147 | 10 | 60 | 418 | 24 | 382 | 7.78e-126 | 379 |
| MS.gene020984.t1 | AT4G08590 | 50.420 | 357 | 146 | 9 | 60 | 401 | 24 | 364 | 1.53e-113 | 346 |
| MS.gene020984.t1 | AT4G08590 | 50.420 | 357 | 146 | 9 | 60 | 401 | 24 | 364 | 1.53e-113 | 346 |
| MS.gene020984.t1 | AT5G13960 | 31.429 | 245 | 132 | 8 | 266 | 494 | 153 | 377 | 1.26e-18 | 90.5 |
| MS.gene020984.t1 | AT5G13960 | 31.429 | 245 | 132 | 8 | 266 | 494 | 19 | 243 | 1.82e-18 | 89.4 |
| MS.gene020984.t1 | AT2G22740 | 36.774 | 155 | 92 | 3 | 266 | 415 | 334 | 487 | 5.36e-18 | 89.0 |
| MS.gene020984.t1 | AT2G22740 | 36.774 | 155 | 92 | 3 | 266 | 415 | 334 | 487 | 5.36e-18 | 89.0 |
| MS.gene020984.t1 | AT2G35160 | 34.375 | 192 | 105 | 7 | 266 | 447 | 333 | 513 | 1.22e-16 | 84.7 |
| MS.gene020984.t1 | AT2G35160 | 34.375 | 192 | 105 | 7 | 266 | 447 | 369 | 549 | 1.39e-16 | 84.3 |
| MS.gene020984.t1 | AT2G35160 | 34.375 | 192 | 105 | 7 | 266 | 447 | 369 | 549 | 1.39e-16 | 84.3 |
| MS.gene020984.t1 | AT2G35160 | 34.375 | 192 | 105 | 7 | 266 | 447 | 369 | 549 | 1.39e-16 | 84.3 |
| MS.gene020984.t1 | AT2G35160 | 34.375 | 192 | 105 | 7 | 266 | 447 | 369 | 549 | 1.39e-16 | 84.3 |
| MS.gene020984.t1 | AT5G04940 | 36.970 | 165 | 85 | 6 | 266 | 420 | 215 | 370 | 4.12e-16 | 82.8 |
| MS.gene020984.t1 | AT5G04940 | 36.970 | 165 | 85 | 6 | 266 | 420 | 215 | 370 | 4.12e-16 | 82.8 |
| MS.gene020984.t1 | AT2G33290 | 36.943 | 157 | 84 | 5 | 266 | 415 | 211 | 359 | 2.75e-15 | 80.1 |
| MS.gene020984.t1 | AT2G33290 | 36.943 | 157 | 84 | 5 | 266 | 415 | 211 | 359 | 2.75e-15 | 80.1 |
| MS.gene020984.t1 | AT2G33290 | 36.943 | 157 | 84 | 5 | 266 | 415 | 211 | 359 | 2.75e-15 | 80.1 |
| MS.gene020984.t1 | AT2G33290 | 36.943 | 157 | 84 | 5 | 266 | 415 | 211 | 359 | 2.75e-15 | 80.1 |
| MS.gene020984.t1 | AT4G13460 | 35.928 | 167 | 86 | 5 | 266 | 422 | 209 | 364 | 1.22e-14 | 78.2 |
| MS.gene020984.t1 | AT4G13460 | 35.928 | 167 | 86 | 5 | 266 | 422 | 209 | 364 | 1.22e-14 | 78.2 |
| MS.gene020984.t1 | AT1G73100 | 35.032 | 157 | 87 | 5 | 266 | 415 | 212 | 360 | 1.10e-11 | 68.6 |
| MS.gene020984.t1 | AT1G17770 | 31.707 | 164 | 88 | 5 | 266 | 418 | 231 | 381 | 3.28e-11 | 67.0 |
Find 199 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCCATGTTGCTGGCATTGC+TGG | 0.208993 | 5.4:-78147637 | MS.gene020984:CDS |
| GCCAACTGTGCGTTGATTCT+TGG | 0.223531 | 5.4:+78147952 | None:intergenic |
| ACTATCCCAAAGGATCATTT+TGG | 0.243586 | 5.4:-78147760 | MS.gene020984:CDS |
| GCTGCTGCTCCGTCTGTTGC+GGG | 0.276350 | 5.4:-78149249 | MS.gene020984:CDS |
| GAACAGATGGAGGAGAATTC+TGG | 0.311936 | 5.4:-78145246 | MS.gene020984:CDS |
| GGCTCAATCTGTCGCTCTCT+CGG | 0.312147 | 5.4:-78147599 | MS.gene020984:CDS |
| GGGTTCTTGTTGGTGATACT+TGG | 0.318104 | 5.4:-78147699 | MS.gene020984:CDS |
| AAGGACGGCTTTATAGCTTT+TGG | 0.324277 | 5.4:+78146367 | None:intergenic |
| TCACTTGTTGTTGGAACAAC+AGG | 0.341153 | 5.4:+78149327 | None:intergenic |
| AGAACCCCACGGTTCCTATT+AGG | 0.346266 | 5.4:+78147715 | None:intergenic |
| TTTCTGGCCAAAGCTATATC+AGG | 0.361815 | 5.4:-78146086 | MS.gene020984:CDS |
| GAGATCCCTTCCACCGCTTC+CGG | 0.367014 | 5.4:+78147531 | None:intergenic |
| ATCGGTCCAAAATGATCCTT+TGG | 0.370324 | 5.4:+78147754 | None:intergenic |
| TCGTATCTCACTCCTGCTTC+CGG | 0.373745 | 5.4:+78147191 | None:intergenic |
| TTGATCTGCAGTGATTTAAC+TGG | 0.374427 | 5.4:-78146837 | MS.gene020984:intron |
| GTCTACATTTCAGGAGGAAA+AGG | 0.376345 | 5.4:-78146482 | MS.gene020984:intron |
| AGAAGGATGAGGTTATTGTT+AGG | 0.376741 | 5.4:-78149125 | MS.gene020984:CDS |
| CCCTGTTCCTGATATAGCTT+TGG | 0.380875 | 5.4:+78146079 | None:intergenic |
| GCCAAAGCTATATCAGGAAC+AGG | 0.381465 | 5.4:-78146080 | MS.gene020984:CDS |
| TTGCTGAGTATGATCCTAAT+AGG | 0.386285 | 5.4:-78147729 | MS.gene020984:CDS |
| GCTATCCTGTTCGTGTTGTT+AGG | 0.395823 | 5.4:-78147420 | MS.gene020984:intron |
| GGTGTTCTTGATATCTTTGA+TGG | 0.400107 | 5.4:-78149096 | MS.gene020984:CDS |
| TCAGTGGTGTAGCATGTGTC+AGG | 0.405321 | 5.4:+78147835 | None:intergenic |
| TTCATCGGCTTCTTACTTTG+TGG | 0.409729 | 5.4:+78146433 | None:intergenic |
| TCCTGCTTCCGGTGCATAAG+AGG | 0.411847 | 5.4:+78147202 | None:intergenic |
| GAGACCTCGGTCTCTTCATC+CGG | 0.413934 | 5.4:+78145189 | None:intergenic |
| CTTGGATTAGTCGCCATCTT+CGG | 0.417258 | 5.4:+78147970 | None:intergenic |
| GCCATTTCTCAAAACACTTC+AGG | 0.422976 | 5.4:+78148040 | None:intergenic |
| CCTGTTGTTCAGCCTGTCGC+TGG | 0.422987 | 5.4:+78145271 | None:intergenic |
| TCGGCTTCTTACTTTGTGGT+GGG | 0.424543 | 5.4:+78146437 | None:intergenic |
| ACCTACTGTTAAGGAGTTCA+AGG | 0.426796 | 5.4:-78146796 | MS.gene020984:CDS |
| ACAGGTTAACAGGGAAATGA+TGG | 0.429592 | 5.4:-78145310 | MS.gene020984:intron |
| CCAGCGACAGGCTGAACAAC+AGG | 0.433445 | 5.4:-78145271 | MS.gene020984:CDS |
| TAGGATGGAATGTAGGCAAT+GGG | 0.434316 | 5.4:-78147671 | MS.gene020984:CDS |
| CAAACTTCTGGTCAAATGAC+TGG | 0.435386 | 5.4:+78147482 | None:intergenic |
| CAACTTCTGCAAAGGCTGCT+TGG | 0.436051 | 5.4:-78146118 | MS.gene020984:CDS |
| TCGAGCATTTCACTTGTTGT+TGG | 0.442853 | 5.4:+78149318 | None:intergenic |
| TCCTCTTATGCACCGGAAGC+AGG | 0.456225 | 5.4:-78147203 | MS.gene020984:CDS |
| ATCGGCTTCTTACTTTGTGG+TGG | 0.457795 | 5.4:+78146436 | None:intergenic |
| AAACAGTGGCTTGCAATTAG+AGG | 0.458150 | 5.4:-78145020 | None:intergenic |
| TGATACTTGGGAGGATAGGA+TGG | 0.459421 | 5.4:-78147686 | MS.gene020984:CDS |
| ATCAACCTTGTCCATGGAGC+TGG | 0.459843 | 5.4:+78146958 | None:intergenic |
| GGTTCTTGTTGGTGATACTT+GGG | 0.460044 | 5.4:-78147698 | MS.gene020984:CDS |
| TGCTGCTGCTCCGTCTGTTG+CGG | 0.460459 | 5.4:-78149250 | MS.gene020984:CDS |
| TTGCGAACCAGTTGCCGAAA+AGG | 0.463278 | 5.4:-78147442 | MS.gene020984:CDS |
| ACCCTCTGCCCTAGCTAGCT+TGG | 0.468975 | 5.4:+78147912 | None:intergenic |
| GAGAAATGTTGGCGCAAAGT+TGG | 0.471436 | 5.4:-78147152 | MS.gene020984:CDS |
| ACTGAGAGAGCAAAGAAAAC+AGG | 0.475684 | 5.4:-78147817 | MS.gene020984:CDS |
| CTTACAGTAACAGGTCTCTC+AGG | 0.475890 | 5.4:+78149042 | None:intergenic |
| CCCTAGCTAGCTTGGCCATA+CGG | 0.475905 | 5.4:+78147920 | None:intergenic |
| GGCTTCTTACTTTGTGGTGG+GGG | 0.477531 | 5.4:+78146439 | None:intergenic |
| CTCAAAGTGGACGCAGTTTG+CGG | 0.478439 | 5.4:-78146053 | MS.gene020984:CDS |
| TTCTGCAAAGGCTGCTTGGA+GGG | 0.479805 | 5.4:-78146114 | MS.gene020984:CDS |
| ACGAACCTAACAACACGAAC+AGG | 0.481034 | 5.4:+78147415 | None:intergenic |
| CTCAGCTATGTCAGTTGCAC+AGG | 0.481756 | 5.4:+78146002 | None:intergenic |
| AAGAAGAAGAAAGGTGATGA+TGG | 0.482504 | 5.4:-78145096 | MS.gene020984:CDS |
| GCTCAATCTGTCGCTCTCTC+GGG | 0.483213 | 5.4:-78147598 | MS.gene020984:CDS |
| CAATATCTGTCGCAAGGTGT+TGG | 0.483430 | 5.4:-78146169 | MS.gene020984:CDS |
| TGAGAATGATCCTTCGTTGA+CGG | 0.484846 | 5.4:-78149199 | MS.gene020984:CDS |
| TCGCCCACTACCTACTGTTA+AGG | 0.485754 | 5.4:-78146805 | MS.gene020984:CDS |
| GACTGCAATTCCACCGAAGA+TGG | 0.491750 | 5.4:-78147983 | MS.gene020984:CDS |
| GATATAGCTTTGGCCAGAAA+AGG | 0.492720 | 5.4:+78146089 | None:intergenic |
| TATGTAGACGACGAGGATCA+TGG | 0.492748 | 5.4:-78147571 | MS.gene020984:CDS |
| CTCAGGCAACTGCATACAAA+AGG | 0.493682 | 5.4:+78149059 | None:intergenic |
| GAGGTTATTGTTAGGAGAAG+TGG | 0.495866 | 5.4:-78149117 | MS.gene020984:CDS |
| AACTCCTTAACAGTAGGTAG+TGG | 0.497268 | 5.4:+78146801 | None:intergenic |
| TCTACATTTCAGGAGGAAAA+GGG | 0.498002 | 5.4:-78146481 | MS.gene020984:intron |
| AGGAAAAGGGCTGTTGGCTG+TGG | 0.498699 | 5.4:-78146468 | MS.gene020984:CDS |
| TCACTTGGTTGAGCACAATC+AGG | 0.500895 | 5.4:+78149285 | None:intergenic |
| TTCCACCGCTTCCGGTGTAA+AGG | 0.500920 | 5.4:+78147539 | None:intergenic |
| TGAGCACAAGGTGTAGTAAG+AGG | 0.501591 | 5.4:+78146141 | None:intergenic |
| GAAGTTTGAAAATATGAATG+AGG | 0.501935 | 5.4:-78147467 | MS.gene020984:CDS |
| CAACAAGTGAAATGCTCGAT+TGG | 0.502883 | 5.4:-78149314 | MS.gene020984:CDS |
| CGTTGATATTACTGAAAGAA+AGG | 0.503780 | 5.4:-78146769 | MS.gene020984:CDS |
| TTGGTGATACTTGGGAGGAT+AGG | 0.509145 | 5.4:-78147690 | MS.gene020984:CDS |
| AGAGGAACGTTTCTCCTTGT+GGG | 0.509810 | 5.4:+78147220 | None:intergenic |
| AGGAACCGTGGGGTTCTTGT+TGG | 0.510062 | 5.4:-78147709 | MS.gene020984:CDS |
| ATTGCTGGTCAGAGTACCTA+CGG | 0.510813 | 5.4:-78147622 | MS.gene020984:CDS |
| AACATGCCATGGTGCTGTGC+AGG | 0.512754 | 5.4:+78149359 | None:intergenic |
| ACCAGCAATGCCAGCAACAT+GGG | 0.512898 | 5.4:+78147636 | None:intergenic |
| TGGTTCCTTTACACCGGAAG+CGG | 0.515629 | 5.4:-78147544 | MS.gene020984:CDS |
| TCCGTATGGCCAAGCTAGCT+AGG | 0.518719 | 5.4:-78147921 | MS.gene020984:CDS |
| ATGTAGACGACGAGGATCAT+GGG | 0.519044 | 5.4:-78147570 | MS.gene020984:CDS |
| TGAAGTGTTTCGGTTTCTGA+TGG | 0.520576 | 5.4:+78149390 | None:intergenic |
| CTTCTGCAAAGGCTGCTTGG+AGG | 0.520625 | 5.4:-78146115 | MS.gene020984:CDS |
| GCTAGGGCAGAGGGTGTTGG+TGG | 0.520678 | 5.4:-78147904 | MS.gene020984:CDS |
| CTGCTGCTCCGTCTGTTGCG+GGG | 0.521108 | 5.4:-78149248 | MS.gene020984:CDS |
| AAAGCCGTCCTTCAAAATCA+AGG | 0.522404 | 5.4:-78146356 | MS.gene020984:CDS |
| AACGAACTTGCTCAAACTGC+AGG | 0.523430 | 5.4:-78148005 | MS.gene020984:CDS |
| AAAGAAAGGATGATCCATCA+TGG | 0.523766 | 5.4:-78146755 | MS.gene020984:CDS |
| GGAAAGGCTAATGCTTGCAG+TGG | 0.524369 | 5.4:-78147796 | MS.gene020984:CDS |
| TTCAGGAGGAAAAGGGCTGT+TGG | 0.527911 | 5.4:-78146474 | MS.gene020984:intron |
| TATACAGAATTGAGAAATGT+TGG | 0.531104 | 5.4:-78147163 | MS.gene020984:CDS |
| TTGCTGGTCAGAGTACCTAC+GGG | 0.532070 | 5.4:-78147621 | MS.gene020984:CDS |
| GATAGAATCACTCCAGCGAC+AGG | 0.535002 | 5.4:-78145283 | MS.gene020984:CDS |
| AAGAGGAACGTTTCTCCTTG+TGG | 0.535286 | 5.4:+78147219 | None:intergenic |
| CGGCTTCTTACTTTGTGGTG+GGG | 0.538312 | 5.4:+78146438 | None:intergenic |
| TCGGTCCAAAATGATCCTTT+GGG | 0.540321 | 5.4:+78147755 | None:intergenic |
| TGCTGCTCCGTCTGTTGCGG+GGG | 0.540490 | 5.4:-78149247 | MS.gene020984:CDS |
| TTTACACCGGAAGCGGTGGA+AGG | 0.542736 | 5.4:-78147537 | MS.gene020984:CDS |
| CTAGCTAGGGCAGAGGGTGT+TGG | 0.546860 | 5.4:-78147907 | MS.gene020984:CDS |
| GACCAGCAATGCCAGCAACA+TGG | 0.551617 | 5.4:+78147635 | None:intergenic |
| GATAGGGTCATAAGGTCTGC+AGG | 0.554621 | 5.4:-78147008 | MS.gene020984:intron |
| TTGCAGAAGTTGTGAGCACA+AGG | 0.559804 | 5.4:+78146129 | None:intergenic |
| GAGTGAAGAAAATGACAAGC+CGG | 0.561110 | 5.4:-78145208 | MS.gene020984:CDS |
| AGGCAGAAATTGTGCCCACA+TGG | 0.561703 | 5.4:+78148060 | None:intergenic |
| GAGCACAAGGTGTAGTAAGA+GGG | 0.563587 | 5.4:+78146142 | None:intergenic |
| TTCTCTTCCTCCGTCAACGA+AGG | 0.565587 | 5.4:+78149189 | None:intergenic |
| TCTTGTTGGTGATACTTGGG+AGG | 0.566196 | 5.4:-78147695 | MS.gene020984:CDS |
| ACAAATTGATGAGGCTGGAG+TGG | 0.566569 | 5.4:-78145049 | MS.gene020984:CDS |
| GGATTAGTCGCCATCTTCGG+TGG | 0.567166 | 5.4:+78147973 | None:intergenic |
| TTTGAGAAATGGCTTGGGCA+AGG | 0.567925 | 5.4:-78148030 | MS.gene020984:CDS |
| GCGGTGGAAGGGATCTCAGT+GGG | 0.568471 | 5.4:-78147525 | MS.gene020984:CDS |
| CACCTTCCTTGTGACGCTGA+CGG | 0.569974 | 5.4:-78149438 | MS.gene020984:CDS |
| ATCTTTGAAAGAGAAGGATG+AGG | 0.574241 | 5.4:-78149136 | MS.gene020984:CDS |
| CTTACATCAAAGTCCCATGA+TGG | 0.576030 | 5.4:+78146741 | None:intergenic |
| TTCCTTTACACCGGAAGCGG+TGG | 0.576676 | 5.4:-78147541 | MS.gene020984:CDS |
| GTTGGAACAACAGGGAGACA+TGG | 0.578356 | 5.4:+78149336 | None:intergenic |
| GGGAGGATAGGATGGAATGT+AGG | 0.579330 | 5.4:-78147678 | MS.gene020984:CDS |
| CTTTCTTTCAGTAATATCAA+CGG | 0.579868 | 5.4:+78146770 | None:intergenic |
| ATGATCCTAATAGGAACCGT+GGG | 0.580583 | 5.4:-78147720 | MS.gene020984:CDS |
| TGGTGGATCTTTGAAAGAGA+AGG | 0.582483 | 5.4:-78149142 | MS.gene020984:CDS |
| GAGGAACAAATTGATGAGGC+TGG | 0.582753 | 5.4:-78145054 | MS.gene020984:CDS |
| AAGCAGGAGTGAGATACGAT+GGG | 0.584452 | 5.4:-78147187 | MS.gene020984:CDS |
| TCTGCAGGTATTTGTTTGTG+AGG | 0.586985 | 5.4:-78146993 | MS.gene020984:CDS |
| CGTCCTTCAAAATCAAGGAT+AGG | 0.587442 | 5.4:-78146351 | MS.gene020984:CDS |
| GAAACGTTCCTCTTATGCAC+CGG | 0.590337 | 5.4:-78147210 | MS.gene020984:CDS |
| CAGTAGGTAGTGGGCGAGGA+CGG | 0.590658 | 5.4:+78146811 | None:intergenic |
| GTGACAATGAGCCAGCTCCA+TGG | 0.592691 | 5.4:-78146969 | MS.gene020984:CDS |
| GCCAAGCTAGCTAGGGCAGA+GGG | 0.594474 | 5.4:-78147913 | MS.gene020984:CDS |
| ATGAGCCAGCTCCATGGACA+AGG | 0.595160 | 5.4:-78146963 | MS.gene020984:intron |
| ATCAAGGATAGGCTATTGAA+AGG | 0.595479 | 5.4:-78146340 | MS.gene020984:intron |
| TCCAAGAATCAACGCACAGT+TGG | 0.595787 | 5.4:-78147953 | MS.gene020984:CDS |
| ATAGGATGGAATGTAGGCAA+TGG | 0.595954 | 5.4:-78147672 | MS.gene020984:CDS |
| AAAGGATCCACAATGTTCAT+CGG | 0.596534 | 5.4:+78146418 | None:intergenic |
| TTACACCGGAAGCGGTGGAA+GGG | 0.597699 | 5.4:-78147536 | MS.gene020984:CDS |
| AAGAAAGGATGATCCATCAT+GGG | 0.600210 | 5.4:-78146754 | MS.gene020984:CDS |
| CACCGTCAGCGTCACAAGGA+AGG | 0.600954 | 5.4:+78149436 | None:intergenic |
| AGCACAAGGTGTAGTAAGAG+GGG | 0.602277 | 5.4:+78146143 | None:intergenic |
| ATTCTCAATAGCGCGAATAG+CGG | 0.603171 | 5.4:+78149215 | None:intergenic |
| GAAGCAGGAGTGAGATACGA+TGG | 0.604687 | 5.4:-78147188 | MS.gene020984:CDS |
| AGGAACAGGGCGACTCAAAG+TGG | 0.605619 | 5.4:-78146066 | MS.gene020984:CDS |
| TGACGCTGACGGTGTATGCA+TGG | 0.605697 | 5.4:-78149427 | MS.gene020984:CDS |
| GAAGAAAGGTGATGATGGCA+AGG | 0.606822 | 5.4:-78145091 | MS.gene020984:CDS |
| CAGGTTAACAGGGAAATGAT+GGG | 0.608219 | 5.4:-78145309 | MS.gene020984:CDS |
| CAATCTGTCGCTCTCTCGGG+TGG | 0.608341 | 5.4:-78147595 | MS.gene020984:CDS |
| GGCCAAGCTAGCTAGGGCAG+AGG | 0.611782 | 5.4:-78147914 | MS.gene020984:CDS |
| TGTGCTCACAACTTCTGCAA+AGG | 0.612302 | 5.4:-78146126 | MS.gene020984:CDS |
| GCAGCAGCAACAACATCACT+TGG | 0.612364 | 5.4:+78149270 | None:intergenic |
| TGAGTATCTTCAGAATCCAC+AGG | 0.613570 | 5.4:-78145983 | MS.gene020984:intron |
| TTGTTGGTTCAGACTCCATG+TGG | 0.613959 | 5.4:-78148075 | MS.gene020984:intron |
| GGGGAGTGGTTCCTTTACAC+CGG | 0.614315 | 5.4:-78147550 | MS.gene020984:CDS |
| CAGTGGTGTAGCATGTGTCA+GGG | 0.615057 | 5.4:+78147836 | None:intergenic |
| GGATCATACTCAGCAAGGAT+CGG | 0.615543 | 5.4:+78147736 | None:intergenic |
| TGGTTGCAATATCTGTCGCA+AGG | 0.615751 | 5.4:-78146175 | MS.gene020984:CDS |
| GGGAGACATGGAACATGCCA+TGG | 0.619691 | 5.4:+78149348 | None:intergenic |
| CCGTATGGCCAAGCTAGCTA+GGG | 0.621370 | 5.4:-78147920 | MS.gene020984:CDS |
| TAAGAAGCCGATGAACATTG+TGG | 0.621417 | 5.4:-78146425 | MS.gene020984:CDS |
| AGGTGATGATGGCAAGGCTG+TGG | 0.621772 | 5.4:-78145085 | MS.gene020984:CDS |
| CACTTGTTGTTGGAACAACA+GGG | 0.621855 | 5.4:+78149328 | None:intergenic |
| AGCGACAGATTGAGCCCCGT+AGG | 0.622050 | 5.4:+78147606 | None:intergenic |
| TGAACAACAGGAAGAACAGA+TGG | 0.623198 | 5.4:-78145259 | MS.gene020984:CDS |
| TATTAGGATCATACTCAGCA+AGG | 0.623524 | 5.4:+78147731 | None:intergenic |
| GAATGATCCTTCGTTGACGG+AGG | 0.625010 | 5.4:-78149196 | MS.gene020984:CDS |
| TGGCAAGGCTGTGGTGAATG+TGG | 0.625687 | 5.4:-78145076 | MS.gene020984:CDS |
| ACGACGAGGATCATGGGGAG+TGG | 0.626547 | 5.4:-78147564 | MS.gene020984:CDS |
| GAGAGCAAAGAAAACAGGAA+AGG | 0.626777 | 5.4:-78147812 | MS.gene020984:CDS |
| TTAACAGTAGGTAGTGGGCG+AGG | 0.626993 | 5.4:+78146807 | None:intergenic |
| GAAAGGCTAATGCTTGCAGT+GGG | 0.626997 | 5.4:-78147795 | MS.gene020984:CDS |
| TATGATCCTAATAGGAACCG+TGG | 0.637653 | 5.4:-78147721 | MS.gene020984:CDS |
| AATCTTCGTGACTATCCCAA+AGG | 0.640437 | 5.4:-78147770 | MS.gene020984:CDS |
| AAGAAACGTCAAGAGTTACA+TGG | 0.640610 | 5.4:-78149162 | MS.gene020984:CDS |
| TATTTGGTTCAGGTCCCACA+AGG | 0.642027 | 5.4:-78147234 | MS.gene020984:intron |
| CCCTTGAACTCCTTAACAGT+AGG | 0.642926 | 5.4:+78146795 | None:intergenic |
| CGTCAGCGTCACAAGGAAGG+TGG | 0.649031 | 5.4:+78149439 | None:intergenic |
| CCAAAGCTATATCAGGAACA+GGG | 0.649568 | 5.4:-78146079 | MS.gene020984:CDS |
| GCTATGTCAGTTGCACAGGT+AGG | 0.652259 | 5.4:+78146006 | None:intergenic |
| GTTGGCGATTGCGATCCGTA+TGG | 0.654592 | 5.4:-78147935 | MS.gene020984:CDS |
| TGTAGACGACGAGGATCATG+GGG | 0.654974 | 5.4:-78147569 | MS.gene020984:CDS |
| ACTCCTTAACAGTAGGTAGT+GGG | 0.656580 | 5.4:+78146802 | None:intergenic |
| CCAGCAATGCCAGCAACATG+GGG | 0.663982 | 5.4:+78147637 | None:intergenic |
| GCAAAACCTGCACAGCACCA+TGG | 0.665753 | 5.4:-78149365 | MS.gene020984:CDS |
| ACAACAGGAAGAACAGATGG+AGG | 0.670527 | 5.4:-78145256 | MS.gene020984:CDS |
| TGTTGGTTCAGACTCCATGT+GGG | 0.679292 | 5.4:-78148074 | MS.gene020984:intron |
| CATACACCGTCAGCGTCACA+AGG | 0.681538 | 5.4:+78149432 | None:intergenic |
| AGGATGGAATGTAGGCAATG+GGG | 0.694397 | 5.4:-78147670 | MS.gene020984:CDS |
| CCTACTGTTAAGGAGTTCAA+GGG | 0.697230 | 5.4:-78146795 | MS.gene020984:CDS |
| TGTGGAGGAACAAATTGATG+AGG | 0.702307 | 5.4:-78145058 | MS.gene020984:CDS |
| AAACGTCAAGAGTTACATGG+TGG | 0.708724 | 5.4:-78149159 | MS.gene020984:CDS |
| TGGAGTGGAAAGCAAAACAG+TGG | 0.708838 | 5.4:-78145034 | MS.gene020984:CDS |
| AGCAGGAGTGAGATACGATG+GGG | 0.713889 | 5.4:-78147186 | MS.gene020984:CDS |
| CAAGGCTGTGGTGAATGTGG+AGG | 0.722052 | 5.4:-78145073 | MS.gene020984:CDS |
| CAAGCCGGATGAAGAGACCG+AGG | 0.726337 | 5.4:-78145193 | MS.gene020984:CDS |
| AGTCGTGGAGGAAATTAACG+AGG | 0.732114 | 5.4:-78145142 | MS.gene020984:CDS |
| AGCGGTGGAAGGGATCTCAG+TGG | 0.736744 | 5.4:-78147526 | MS.gene020984:CDS |
| TATCACCAACAAGAACCCCA+CGG | 0.739370 | 5.4:+78147704 | None:intergenic |
| TGCTGGTCAGAGTACCTACG+GGG | 0.755559 | 5.4:-78147620 | MS.gene020984:CDS |
| TGATCCTAATAGGAACCGTG+GGG | 0.767429 | 5.4:-78147719 | MS.gene020984:CDS |
| GGGTGGTTATGTAGACGACG+AGG | 0.777978 | 5.4:-78147578 | MS.gene020984:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAAATTTAAAAAAACAAAA+AGG | + | chr5.4:78145485-78145504 | None:intergenic | 10.0% |
| !! | TTCAATTAAAATATAATCAT+TGG | + | chr5.4:78145994-78146013 | None:intergenic | 10.0% |
| !!! | ATATTTGTTTTAATCAATTA+TGG | - | chr5.4:78148665-78148684 | MS.gene020984:intron | 10.0% |
| !!! | CAATTATTAAGTTTAAATTT+TGG | - | chr5.4:78147890-78147909 | MS.gene020984:CDS | 10.0% |
| !!! | AATCCATTTTAATTAGTAAA+GGG | + | chr5.4:78145899-78145918 | None:intergenic | 15.0% |
| !!! | TAATCCATTTTAATTAGTAA+AGG | + | chr5.4:78145900-78145919 | None:intergenic | 15.0% |
| !!! | TTAAAATATAATCATTGGTT+AGG | + | chr5.4:78145989-78146008 | None:intergenic | 15.0% |
| !! | ACAAAAAGGGTAAAAATTTA+AGG | + | chr5.4:78145471-78145490 | None:intergenic | 20.0% |
| !! | AGATTAGGAATACAATTAAA+AGG | + | chr5.4:78148730-78148749 | None:intergenic | 20.0% |
| !! | ATTGAAGTGTGTTAAATATT+TGG | - | chr5.4:78146008-78146027 | MS.gene020984:CDS | 20.0% |
| !! | TAACAAAAACAAACTAAGTT+AGG | + | chr5.4:78145767-78145786 | None:intergenic | 20.0% |
| !! | TCCTTCAGTTAAAATTAAAT+TGG | + | chr5.4:78146205-78146224 | None:intergenic | 20.0% |
| !! | TTAATAATCATATTGATGTC+AGG | - | chr5.4:78148638-78148657 | MS.gene020984:intron | 20.0% |
| !!! | AACTTTTATTTTTCCTATCT+GGG | - | chr5.4:78147555-78147574 | MS.gene020984:CDS | 20.0% |
| !!! | ACCAATTTAATTTTAACTGA+AGG | - | chr5.4:78146201-78146220 | MS.gene020984:intron | 20.0% |
| !!! | AGAACAACTTGATAATTTTT+TGG | + | chr5.4:78146611-78146630 | None:intergenic | 20.0% |
| !!! | ATCCATTTTAATTAGTAAAG+GGG | + | chr5.4:78145898-78145917 | None:intergenic | 20.0% |
| !!! | CTTATTTATGATCTTTTAAC+AGG | - | chr5.4:78149151-78149170 | MS.gene020984:CDS | 20.0% |
| !!! | TAACTTAGTTTGTTTTTGTT+AGG | - | chr5.4:78145766-78145785 | MS.gene020984:intron | 20.0% |
| !!! | TCAATATTTTAAGTACCTAA+AGG | + | chr5.4:78148909-78148928 | None:intergenic | 20.0% |
| !!! | TGAAAATGTTTGAAGTTTTT+TGG | - | chr5.4:78148974-78148993 | MS.gene020984:intron | 20.0% |
| !!! | TGATTAATTGATTCCTTATT+AGG | - | chr5.4:78147166-78147185 | MS.gene020984:CDS | 20.0% |
| !!! | TTGAACAATACAAACTTTTT+AGG | + | chr5.4:78146173-78146192 | None:intergenic | 20.0% |
| !!! | TTTTATTAGCCTAGTTTTTA+GGG | - | chr5.4:78148585-78148604 | MS.gene020984:intron | 20.0% |
| ! | ACAATGAAACTAACCTAATA+AGG | + | chr5.4:78147182-78147201 | None:intergenic | 25.0% |
| ! | ACAGATCTAACAAACTAATA+AGG | + | chr5.4:78147125-78147144 | None:intergenic | 25.0% |
| ! | ACTGAAGTGTGTTAAATATT+TGG | - | chr5.4:78145642-78145661 | MS.gene020984:intron | 25.0% |
| ! | AGAATTTCACATTCTCAAAA+AGG | + | chr5.4:78148798-78148817 | None:intergenic | 25.0% |
| ! | AGTGTTTACTATATTGTCTT+GGG | - | chr5.4:78148836-78148855 | MS.gene020984:intron | 25.0% |
| ! | CAACAAAAATTCAAATTGTC+AGG | - | chr5.4:78148089-78148108 | MS.gene020984:intron | 25.0% |
| ! | CAATTAAAAGGAATTCAACA+AGG | + | chr5.4:78148718-78148737 | None:intergenic | 25.0% |
| ! | CTTTCTTTCAGTAATATCAA+CGG | + | chr5.4:78147712-78147731 | None:intergenic | 25.0% |
| ! | GAAGTTTGAAAATATGAATG+AGG | - | chr5.4:78147012-78147031 | MS.gene020984:intron | 25.0% |
| ! | GATAGGAAAAATAAAAGTTG+AGG | + | chr5.4:78147554-78147573 | None:intergenic | 25.0% |
| ! | GGAAAGTTTCATAGTAAATT+AGG | + | chr5.4:78148773-78148792 | None:intergenic | 25.0% |
| ! | TAGTGTTTACTATATTGTCT+TGG | - | chr5.4:78148835-78148854 | MS.gene020984:intron | 25.0% |
| ! | TATACAGAATTGAGAAATGT+TGG | - | chr5.4:78147316-78147335 | MS.gene020984:intron | 25.0% |
| ! | TGTTTATGGATCTGTTTATT+TGG | - | chr5.4:78147229-78147248 | MS.gene020984:intron | 25.0% |
| !! | ACTTCAAACATTTTCATACA+CGG | + | chr5.4:78148875-78148894 | None:intergenic | 25.0% |
| !! | CATTCATATTTTCAAACTTC+TGG | + | chr5.4:78147012-78147031 | None:intergenic | 25.0% |
| !! | CTGACAATTTGAATTTTTGT+TGG | + | chr5.4:78148091-78148110 | None:intergenic | 25.0% |
| !! | TGAATTTTTGTTGGATCAAA+AGG | + | chr5.4:78148082-78148101 | None:intergenic | 25.0% |
| !!! | AAACTTTTTAGGTCATCTAA+AGG | + | chr5.4:78146162-78146181 | None:intergenic | 25.0% |
| !!! | AAGTTTTTTGGCAAATCTTT+AGG | - | chr5.4:78148986-78149005 | MS.gene020984:intron | 25.0% |
| !!! | CAACTTTTATTTTTCCTATC+TGG | - | chr5.4:78147554-78147573 | MS.gene020984:CDS | 25.0% |
| !!! | GTTTTATTAGCCTAGTTTTT+AGG | - | chr5.4:78148584-78148603 | MS.gene020984:intron | 25.0% |
| !!! | TCCATTTTAATTAGTAAAGG+GGG | + | chr5.4:78145897-78145916 | None:intergenic | 25.0% |
| !!! | TGTTAATTTGTCTACATTTC+AGG | - | chr5.4:78147988-78148007 | MS.gene020984:CDS | 25.0% |
| !!! | TTAATTGTTTTTGCAGAGTT+TGG | - | chr5.4:78148284-78148303 | MS.gene020984:intron | 25.0% |
| !!! | TTGGTATGCTATTTTGTTTA+TGG | - | chr5.4:78147215-78147234 | MS.gene020984:CDS | 25.0% |
| AAAACACCTTCAAATAACAG+TGG | + | chr5.4:78148213-78148232 | None:intergenic | 30.0% | |
| AATATATACAAGTGGACGTA+TGG | - | chr5.4:78147594-78147613 | MS.gene020984:CDS | 30.0% | |
| AATGAAAAGAACTGTCTTGT+TGG | - | chr5.4:78148549-78148568 | MS.gene020984:intron | 30.0% | |
| ACTGAAGGATGTTAGATATT+TGG | - | chr5.4:78146216-78146235 | MS.gene020984:intron | 30.0% | |
| CATAGTAAATTAGGAATGCT+AGG | + | chr5.4:78148764-78148783 | None:intergenic | 30.0% | |
| CATTGTGATATGTGATGAAT+TGG | - | chr5.4:78147196-78147215 | MS.gene020984:CDS | 30.0% | |
| CGATTCAATCTCAAATTACA+AGG | + | chr5.4:78145735-78145754 | None:intergenic | 30.0% | |
| CGTTGATATTACTGAAAGAA+AGG | - | chr5.4:78147710-78147729 | MS.gene020984:CDS | 30.0% | |
| CTGCAAAAACAATTAACCAA+AGG | + | chr5.4:78148280-78148299 | None:intergenic | 30.0% | |
| GAAAAAAAGCTTACAGTAAC+AGG | + | chr5.4:78145449-78145468 | None:intergenic | 30.0% | |
| GAAGTTAATTGTTATCACCA+AGG | + | chr5.4:78148173-78148192 | None:intergenic | 30.0% | |
| GTTGCACTAATATATACAAG+TGG | - | chr5.4:78147586-78147605 | MS.gene020984:CDS | 30.0% | |
| TAACCAAAACAAACTCGATT+AGG | + | chr5.4:78145597-78145616 | None:intergenic | 30.0% | |
| TAGGCATTTCATAGTAGATT+AGG | + | chr5.4:78148745-78148764 | None:intergenic | 30.0% | |
| TCCCCCTTTACTAATTAAAA+TGG | - | chr5.4:78145893-78145912 | MS.gene020984:intron | 30.0% | |
| TGAACAATCGATAATCCATT+AGG | + | chr5.4:78147419-78147438 | None:intergenic | 30.0% | |
| TTATCTGAACGATTCAATCT+TGG | - | chr5.4:78145619-78145638 | MS.gene020984:intron | 30.0% | |
| TTTCACATTCTCAAAAAGGT+TGG | + | chr5.4:78148794-78148813 | None:intergenic | 30.0% | |
| ! | AGTTTTGCTCTACATAAAAG+AGG | - | chr5.4:78149117-78149136 | MS.gene020984:CDS | 30.0% |
| ! | ATAGGCTATTGAAAGGTATA+TGG | - | chr5.4:78148146-78148165 | MS.gene020984:intron | 30.0% |
| ! | ATTGAAGCATCTTGAACATT+TGG | - | chr5.4:78146334-78146353 | MS.gene020984:intron | 30.0% |
| ! | CTAACAATACAAACTTGTTC+AGG | + | chr5.4:78146310-78146329 | None:intergenic | 30.0% |
| ! | GATCTTTTAACAGGTTAACA+GGG | - | chr5.4:78149160-78149179 | MS.gene020984:CDS | 30.0% |
| ! | GTTCAAGCTTTATCATTGAT+GGG | - | chr5.4:78147434-78147453 | MS.gene020984:CDS | 30.0% |
| ! | TAATTTGTCTACATTTCAGG+AGG | - | chr5.4:78147991-78148010 | MS.gene020984:CDS | 30.0% |
| ! | TGATCTTTTAACAGGTTAAC+AGG | - | chr5.4:78149159-78149178 | MS.gene020984:CDS | 30.0% |
| ! | TGTTAATTCAGTTTTGCCTT+TGG | - | chr5.4:78148261-78148280 | MS.gene020984:intron | 30.0% |
| ! | TGTTCAAGCTTTATCATTGA+TGG | - | chr5.4:78147433-78147452 | MS.gene020984:CDS | 30.0% |
| ! | TTCAAGCTTTATCATTGATG+GGG | - | chr5.4:78147435-78147454 | MS.gene020984:CDS | 30.0% |
| !! | TTTGTTGTTGTTGTTGTTGT+TGG | - | chr5.4:78146388-78146407 | MS.gene020984:CDS | 30.0% |
| !! | TTTTGGGAAGATTATTTGCT+AGG | - | chr5.4:78147907-78147926 | MS.gene020984:CDS | 30.0% |
| !!! | AAGTTTTGTTGCAAACCTTT+AGG | - | chr5.4:78148891-78148910 | MS.gene020984:intron | 30.0% |
| !!! | GGGAATCTTTTTTTGTGATA+GGG | - | chr5.4:78147455-78147474 | MS.gene020984:CDS | 30.0% |
| !!! | TAATCGAGTTTGTTTTGGTT+AGG | - | chr5.4:78145596-78145615 | MS.gene020984:intron | 30.0% |
| !!! | TTTGTTTTTGTTAGGTTACC+TGG | - | chr5.4:78145774-78145793 | MS.gene020984:intron | 30.0% |
| !!! | TTTTTTGTGATAGGGTCATA+AGG | - | chr5.4:78147463-78147482 | MS.gene020984:CDS | 30.0% |
| AAACTATGGTACAGCAAAGT+TGG | + | chr5.4:78147950-78147969 | None:intergenic | 35.0% | |
| AAAGAAAGGATGATCCATCA+TGG | - | chr5.4:78147724-78147743 | MS.gene020984:CDS | 35.0% | |
| AAAGGATCCACAATGTTCAT+CGG | + | chr5.4:78148064-78148083 | None:intergenic | 35.0% | |
| AACTATGGTACAGCAAAGTT+GGG | + | chr5.4:78147949-78147968 | None:intergenic | 35.0% | |
| AAGAAACGTCAAGAGTTACA+TGG | - | chr5.4:78145317-78145336 | MS.gene020984:intron | 35.0% | |
| AAGAAAGGATGATCCATCAT+GGG | - | chr5.4:78147725-78147744 | MS.gene020984:CDS | 35.0% | |
| AAGAAGAAGAAAGGTGATGA+TGG | - | chr5.4:78149383-78149402 | MS.gene020984:CDS | 35.0% | |
| AAGTTAAGATTGAATCGTCC+AGG | + | chr5.4:78145795-78145814 | None:intergenic | 35.0% | |
| ACAAAAATCAACCTTGTCCA+TGG | + | chr5.4:78147530-78147549 | None:intergenic | 35.0% | |
| AGAAGGATGAGGTTATTGTT+AGG | - | chr5.4:78145354-78145373 | MS.gene020984:intron | 35.0% | |
| ATAACAGTGGTCTAAGGAAA+AGG | + | chr5.4:78148200-78148219 | None:intergenic | 35.0% | |
| ATCAAGGATAGGCTATTGAA+AGG | - | chr5.4:78148139-78148158 | MS.gene020984:intron | 35.0% | |
| CAAACCAAACCCTAAAAACT+AGG | + | chr5.4:78148597-78148616 | None:intergenic | 35.0% | |
| CATCTAAAGGATTCATTCTC+AGG | + | chr5.4:78146149-78146168 | None:intergenic | 35.0% | |
| CTTCAAATAACAGTGGTCTA+AGG | + | chr5.4:78148206-78148225 | None:intergenic | 35.0% | |
| GAGAGACCTTACAAAAACTA+TGG | + | chr5.4:78147964-78147983 | None:intergenic | 35.0% | |
| GGTGTTCTTGATATCTTTGA+TGG | - | chr5.4:78145383-78145402 | MS.gene020984:intron | 35.0% | |
| TATTAGGATCATACTCAGCA+AGG | + | chr5.4:78146751-78146770 | None:intergenic | 35.0% | |
| TCTACATTTCAGGAGGAAAA+GGG | - | chr5.4:78147998-78148017 | MS.gene020984:CDS | 35.0% | |
| TGAGAATGTGAAATTCTGTC+TGG | - | chr5.4:78148801-78148820 | MS.gene020984:intron | 35.0% | |
| TTGATCTGCAGTGATTTAAC+TGG | - | chr5.4:78147642-78147661 | MS.gene020984:CDS | 35.0% | |
| TTGCTGAGTATGATCCTAAT+AGG | - | chr5.4:78146750-78146769 | MS.gene020984:CDS | 35.0% | |
| ! | ACTATCCCAAAGGATCATTT+TGG | - | chr5.4:78146719-78146738 | MS.gene020984:intron | 35.0% |
| ! | ATCTTTGAAAGAGAAGGATG+AGG | - | chr5.4:78145343-78145362 | MS.gene020984:intron | 35.0% |
| ! | ATTGAAAGGTATATGGTCCT+TGG | - | chr5.4:78148153-78148172 | MS.gene020984:intron | 35.0% |
| ! | CTTAGACCACTGTTATTTGA+AGG | - | chr5.4:78148204-78148223 | MS.gene020984:intron | 35.0% |
| ! | GCTGTACCATAGTTTTTGTA+AGG | - | chr5.4:78147955-78147974 | MS.gene020984:CDS | 35.0% |
| ! | TAGCCTATCCTTGATTTTGA+AGG | + | chr5.4:78148134-78148153 | None:intergenic | 35.0% |
| ! | TGGATCTGTTTATTTGGTTC+AGG | - | chr5.4:78147235-78147254 | MS.gene020984:intron | 35.0% |
| !! | CTATCCTTGATTTTGAAGGA+CGG | + | chr5.4:78148130-78148149 | None:intergenic | 35.0% |
| !! | GGTTTTGCAATGAAGTGTTT+CGG | + | chr5.4:78145102-78145121 | None:intergenic | 35.0% |
| !! | GTCTTGTTGGACTTTTAGTT+GGG | - | chr5.4:78148562-78148581 | MS.gene020984:intron | 35.0% |
| !! | TGACCTAATCGAGTTTGTTT+TGG | - | chr5.4:78145591-78145610 | MS.gene020984:intron | 35.0% |
| !! | TGTCTTGTTGGACTTTTAGT+TGG | - | chr5.4:78148561-78148580 | MS.gene020984:intron | 35.0% |
| !!! | AAGTGTTTTGAGAAATGGCT+TGG | - | chr5.4:78146443-78146462 | MS.gene020984:CDS | 35.0% |
| !!! | AGTGTTTTGAGAAATGGCTT+GGG | - | chr5.4:78146444-78146463 | MS.gene020984:CDS | 35.0% |
| !!! | GGGGAATCTTTTTTTGTGAT+AGG | - | chr5.4:78147454-78147473 | MS.gene020984:CDS | 35.0% |
| !!! | TTAGCCTAGTTTTTAGGGTT+TGG | - | chr5.4:78148590-78148609 | MS.gene020984:intron | 35.0% |
| AAACGTCAAGAGTTACATGG+TGG | - | chr5.4:78145320-78145339 | MS.gene020984:intron | 40.0% | |
| AAAGCCGTCCTTCAAAATCA+AGG | - | chr5.4:78148123-78148142 | MS.gene020984:intron | 40.0% | |
| AACTCCTTAACAGTAGGTAG+TGG | + | chr5.4:78147681-78147700 | None:intergenic | 40.0% | |
| AATCTTCGTGACTATCCCAA+AGG | - | chr5.4:78146709-78146728 | MS.gene020984:intron | 40.0% | |
| ACAGGTTAACAGGGAAATGA+TGG | - | chr5.4:78149169-78149188 | MS.gene020984:CDS | 40.0% | |
| ACCTACTGTTAAGGAGTTCA+AGG | - | chr5.4:78147683-78147702 | MS.gene020984:CDS | 40.0% | |
| ACTATGGTACAGCAAAGTTG+GGG | + | chr5.4:78147948-78147967 | None:intergenic | 40.0% | |
| ACTCCTTAACAGTAGGTAGT+GGG | + | chr5.4:78147680-78147699 | None:intergenic | 40.0% | |
| ACTGAGAGAGCAAAGAAAAC+AGG | - | chr5.4:78146662-78146681 | MS.gene020984:intron | 40.0% | |
| ATAGGATGGAATGTAGGCAA+TGG | - | chr5.4:78146807-78146826 | MS.gene020984:CDS | 40.0% | |
| ATCGGTCCAAAATGATCCTT+TGG | + | chr5.4:78146728-78146747 | None:intergenic | 40.0% | |
| ATGATCCTAATAGGAACCGT+GGG | - | chr5.4:78146759-78146778 | MS.gene020984:CDS | 40.0% | |
| ATTCTCAATAGCGCGAATAG+CGG | + | chr5.4:78145267-78145286 | None:intergenic | 40.0% | |
| CAAACTTCTGGTCAAATGAC+TGG | + | chr5.4:78147000-78147019 | None:intergenic | 40.0% | |
| CAACAAGTGAAATGCTCGAT+TGG | - | chr5.4:78145165-78145184 | MS.gene020984:CDS | 40.0% | |
| CAGAAATGTAATACGCAGCA+CGG | + | chr5.4:78147822-78147841 | None:intergenic | 40.0% | |
| CAGGTTAACAGGGAAATGAT+GGG | - | chr5.4:78149170-78149189 | MS.gene020984:CDS | 40.0% | |
| CCAAAGCTATATCAGGAACA+GGG | - | chr5.4:78148400-78148419 | MS.gene020984:intron | 40.0% | |
| CCACAGAAGAAGAAGAAGAA+AGG | - | chr5.4:78149374-78149393 | MS.gene020984:CDS | 40.0% | |
| CCTACTGTTAAGGAGTTCAA+GGG | - | chr5.4:78147684-78147703 | MS.gene020984:CDS | 40.0% | |
| CCTTTCTTCTTCTTCTTCTG+TGG | + | chr5.4:78149377-78149396 | None:intergenic | 40.0% | |
| CGTCCTTCAAAATCAAGGAT+AGG | - | chr5.4:78148128-78148147 | MS.gene020984:intron | 40.0% | |
| CTTACATCAAAGTCCCATGA+TGG | + | chr5.4:78147741-78147760 | None:intergenic | 40.0% | |
| GAGAGCAAAGAAAACAGGAA+AGG | - | chr5.4:78146667-78146686 | MS.gene020984:intron | 40.0% | |
| GAGGTTATTGTTAGGAGAAG+TGG | - | chr5.4:78145362-78145381 | MS.gene020984:intron | 40.0% | |
| GAGTGAAGAAAATGACAAGC+CGG | - | chr5.4:78149271-78149290 | MS.gene020984:CDS | 40.0% | |
| GCCATTTCTCAAAACACTTC+AGG | + | chr5.4:78146442-78146461 | None:intergenic | 40.0% | |
| GTACATTGAGTGAGACCTAA+TGG | - | chr5.4:78147401-78147420 | MS.gene020984:intron | 40.0% | |
| GTCTACATTTCAGGAGGAAA+AGG | - | chr5.4:78147997-78148016 | MS.gene020984:CDS | 40.0% | |
| GTCTCACTCAATGTACTTAC+TGG | + | chr5.4:78147397-78147416 | None:intergenic | 40.0% | |
| TAAGAAGCCGATGAACATTG+TGG | - | chr5.4:78148054-78148073 | MS.gene020984:CDS | 40.0% | |
| TAGGATGGAATGTAGGCAAT+GGG | - | chr5.4:78146808-78146827 | MS.gene020984:CDS | 40.0% | |
| TATGATCCTAATAGGAACCG+TGG | - | chr5.4:78146758-78146777 | MS.gene020984:CDS | 40.0% | |
| TCGGTCCAAAATGATCCTTT+GGG | + | chr5.4:78146727-78146746 | None:intergenic | 40.0% | |
| TCTGCAGGTATTTGTTTGTG+AGG | - | chr5.4:78147486-78147505 | MS.gene020984:CDS | 40.0% | |
| TGAACAACAGGAAGAACAGA+TGG | - | chr5.4:78149220-78149239 | MS.gene020984:CDS | 40.0% | |
| TGAGAATGATCCTTCGTTGA+CGG | - | chr5.4:78145280-78145299 | MS.gene020984:CDS | 40.0% | |
| TGAGTATCTTCAGAATCCAC+AGG | - | chr5.4:78148496-78148515 | MS.gene020984:intron | 40.0% | |
| TGATTCGAGTGAAAAAGTCG+TGG | - | chr5.4:78149322-78149341 | MS.gene020984:CDS | 40.0% | |
| TGTGGAGGAACAAATTGATG+AGG | - | chr5.4:78149421-78149440 | MS.gene020984:CDS | 40.0% | |
| TTCTTCTTCTTCTTCTGTGG+AGG | + | chr5.4:78149374-78149393 | None:intergenic | 40.0% | |
| ! | CAAAACAGTGGCTTGCAATT+AGG | - | chr5.4:78149457-78149476 | MS.gene020984:CDS | 40.0% |
| ! | TGAAGTGTTTCGGTTTCTGA+TGG | + | chr5.4:78145092-78145111 | None:intergenic | 40.0% |
| ! | TGGTGGATCTTTGAAAGAGA+AGG | - | chr5.4:78145337-78145356 | MS.gene020984:intron | 40.0% |
| ! | TGTTTTCTTTGCTCTCTCAG+TGG | + | chr5.4:78146663-78146682 | None:intergenic | 40.0% |
| ! | TTTCTGGCCAAAGCTATATC+AGG | - | chr5.4:78148393-78148412 | MS.gene020984:intron | 40.0% |
| ! | TTTTCCTATCTGGGTGTTTG+TGG | - | chr5.4:78147564-78147583 | MS.gene020984:CDS | 40.0% |
| !! | AAGGACGGCTTTATAGCTTT+TGG | + | chr5.4:78148115-78148134 | None:intergenic | 40.0% |
| !! | CACTTGTTGTTGGAACAACA+GGG | + | chr5.4:78145154-78145173 | None:intergenic | 40.0% |
| !! | GATATAGCTTTGGCCAGAAA+AGG | + | chr5.4:78148393-78148412 | None:intergenic | 40.0% |
| !! | GGTTCTTGTTGGTGATACTT+GGG | - | chr5.4:78146781-78146800 | MS.gene020984:CDS | 40.0% |
| !! | TCACTTGTTGTTGGAACAAC+AGG | + | chr5.4:78145155-78145174 | None:intergenic | 40.0% |
| !! | TCGAGCATTTCACTTGTTGT+TGG | + | chr5.4:78145164-78145183 | None:intergenic | 40.0% |
| !! | TTCATCGGCTTCTTACTTTG+TGG | + | chr5.4:78148049-78148068 | None:intergenic | 40.0% |
| !!! | ATCAGAGGATTTTGAGACCT+CGG | + | chr5.4:78149306-78149325 | None:intergenic | 40.0% |
| !!! | GACTTTTTCACTCGAATCAG+AGG | + | chr5.4:78149321-78149340 | None:intergenic | 40.0% |
| !!! | GCCTGAAGTGTTTTGAGAAA+TGG | - | chr5.4:78146438-78146457 | MS.gene020984:CDS | 40.0% |
| AAGAGGAACGTTTCTCCTTG+TGG | + | chr5.4:78147263-78147282 | None:intergenic | 45.0% | |
| AAGCAGGAGTGAGATACGAT+GGG | - | chr5.4:78147292-78147311 | MS.gene020984:intron | 45.0% | |
| AATACGTGCAGTAGTACCTG+TGG | + | chr5.4:78148515-78148534 | None:intergenic | 45.0% | |
| AATGTAATACGCAGCACGGA+AGG | + | chr5.4:78147818-78147837 | None:intergenic | 45.0% | |
| ACAAATTGATGAGGCTGGAG+TGG | - | chr5.4:78149430-78149449 | MS.gene020984:CDS | 45.0% | |
| ACAACAGGAAGAACAGATGG+AGG | - | chr5.4:78149223-78149242 | MS.gene020984:CDS | 45.0% | |
| ACGAACCTAACAACACGAAC+AGG | + | chr5.4:78147067-78147086 | None:intergenic | 45.0% | |
| AGAGGAACGTTTCTCCTTGT+GGG | + | chr5.4:78147262-78147281 | None:intergenic | 45.0% | |
| AGCACAAGGTGTAGTAAGAG+GGG | + | chr5.4:78148339-78148358 | None:intergenic | 45.0% | |
| AGGATGGAATGTAGGCAATG+GGG | - | chr5.4:78146809-78146828 | MS.gene020984:CDS | 45.0% | |
| AGTCGTGGAGGAAATTAACG+AGG | - | chr5.4:78149337-78149356 | MS.gene020984:CDS | 45.0% | |
| ATGTAGACGACGAGGATCAT+GGG | - | chr5.4:78146909-78146928 | MS.gene020984:intron | 45.0% | |
| CAATATCTGTCGCAAGGTGT+TGG | - | chr5.4:78148310-78148329 | MS.gene020984:intron | 45.0% | |
| CCCTGTTCCTGATATAGCTT+TGG | + | chr5.4:78148403-78148422 | None:intergenic | 45.0% | |
| CCCTTGAACTCCTTAACAGT+AGG | + | chr5.4:78147687-78147706 | None:intergenic | 45.0% | |
| CTCAGGCAACTGCATACAAA+AGG | + | chr5.4:78145423-78145442 | None:intergenic | 45.0% | |
| CTTACAGTAACAGGTCTCTC+AGG | + | chr5.4:78145440-78145459 | None:intergenic | 45.0% | |
| GAAACGTTCCTCTTATGCAC+CGG | - | chr5.4:78147269-78147288 | MS.gene020984:intron | 45.0% | |
| GAAAGGCTAATGCTTGCAGT+GGG | - | chr5.4:78146684-78146703 | MS.gene020984:intron | 45.0% | |
| GAACAGATGGAGGAGAATTC+TGG | - | chr5.4:78149233-78149252 | MS.gene020984:CDS | 45.0% | |
| GAGAAATGTTGGCGCAAAGT+TGG | - | chr5.4:78147327-78147346 | MS.gene020984:intron | 45.0% | |
| GAGCACAAGGTGTAGTAAGA+GGG | + | chr5.4:78148340-78148359 | None:intergenic | 45.0% | |
| GAGGAACAAATTGATGAGGC+TGG | - | chr5.4:78149425-78149444 | MS.gene020984:CDS | 45.0% | |
| GCCAAAGCTATATCAGGAAC+AGG | - | chr5.4:78148399-78148418 | MS.gene020984:intron | 45.0% | |
| GGATCATACTCAGCAAGGAT+CGG | + | chr5.4:78146746-78146765 | None:intergenic | 45.0% | |
| TATCACCAACAAGAACCCCA+CGG | + | chr5.4:78146778-78146797 | None:intergenic | 45.0% | |
| TATGTAGACGACGAGGATCA+TGG | - | chr5.4:78146908-78146927 | MS.gene020984:intron | 45.0% | |
| TCACTTGGTTGAGCACAATC+AGG | + | chr5.4:78145197-78145216 | None:intergenic | 45.0% | |
| TCCAAGAATCAACGCACAGT+TGG | - | chr5.4:78146526-78146545 | MS.gene020984:intron | 45.0% | |
| TCGGCTTCTTACTTTGTGGT+GGG | + | chr5.4:78148045-78148064 | None:intergenic | 45.0% | |
| TGAGCACAAGGTGTAGTAAG+AGG | + | chr5.4:78148341-78148360 | None:intergenic | 45.0% | |
| TGATACTTGGGAGGATAGGA+TGG | - | chr5.4:78146793-78146812 | MS.gene020984:CDS | 45.0% | |
| TGATCCTAATAGGAACCGTG+GGG | - | chr5.4:78146760-78146779 | MS.gene020984:CDS | 45.0% | |
| TGGAGTGGAAAGCAAAACAG+TGG | - | chr5.4:78149445-78149464 | MS.gene020984:CDS | 45.0% | |
| TGGTTGCAATATCTGTCGCA+AGG | - | chr5.4:78148304-78148323 | MS.gene020984:intron | 45.0% | |
| TGTGCTCACAACTTCTGCAA+AGG | - | chr5.4:78148353-78148372 | MS.gene020984:intron | 45.0% | |
| TTCGAGTGAAAAAGTCGTGG+AGG | - | chr5.4:78149325-78149344 | MS.gene020984:CDS | 45.0% | |
| TTGCAGAAGTTGTGAGCACA+AGG | + | chr5.4:78148353-78148372 | None:intergenic | 45.0% | |
| ! | AACGAACTTGCTCAAACTGC+AGG | - | chr5.4:78146474-78146493 | MS.gene020984:intron | 45.0% |
| ! | ATCGGCTTCTTACTTTGTGG+TGG | + | chr5.4:78148046-78148065 | None:intergenic | 45.0% |
| ! | ATTGCTGGTCAGAGTACCTA+CGG | - | chr5.4:78146857-78146876 | MS.gene020984:intron | 45.0% |
| ! | CACGAACAGGATAGCCTTTT+CGG | + | chr5.4:78147054-78147073 | None:intergenic | 45.0% |
| ! | GCTATCCTGTTCGTGTTGTT+AGG | - | chr5.4:78147059-78147078 | MS.gene020984:intron | 45.0% |
| ! | TATTTGGTTCAGGTCCCACA+AGG | - | chr5.4:78147245-78147264 | MS.gene020984:intron | 45.0% |
| ! | TTGGTGATACTTGGGAGGAT+AGG | - | chr5.4:78146789-78146808 | MS.gene020984:CDS | 45.0% |
| ! | TTTGAGAAATGGCTTGGGCA+AGG | - | chr5.4:78146449-78146468 | MS.gene020984:CDS | 45.0% |
| !! | CTTGGATTAGTCGCCATCTT+CGG | + | chr5.4:78146512-78146531 | None:intergenic | 45.0% |
| !! | GAAGAAAGGTGATGATGGCA+AGG | - | chr5.4:78149388-78149407 | MS.gene020984:CDS | 45.0% |
| !! | GGGTTCTTGTTGGTGATACT+TGG | - | chr5.4:78146780-78146799 | MS.gene020984:CDS | 45.0% |
| !! | TCTTGTTGGTGATACTTGGG+AGG | - | chr5.4:78146784-78146803 | MS.gene020984:CDS | 45.0% |
| !! | TGTTGGTTCAGACTCCATGT+GGG | - | chr5.4:78146405-78146424 | MS.gene020984:CDS | 45.0% |
| !! | TTGTTGGTTCAGACTCCATG+TGG | - | chr5.4:78146404-78146423 | MS.gene020984:CDS | 45.0% |
| !! | TAAATTTAAAAAAACAAAAA+GGG | + | chr5.4:78145484-78145503 | None:intergenic | 5.0% |
| !!! | AATTATTAAGTTTAAATTTT+GGG | - | chr5.4:78147891-78147910 | MS.gene020984:CDS | 5.0% |
| ACCAGCAATGCCAGCAACAT+GGG | + | chr5.4:78146846-78146865 | None:intergenic | 50.0% | |
| AGAACCCCACGGTTCCTATT+AGG | + | chr5.4:78146767-78146786 | None:intergenic | 50.0% | |
| AGCAGGAGTGAGATACGATG+GGG | - | chr5.4:78147293-78147312 | MS.gene020984:intron | 50.0% | |
| AGGCAGAAATTGTGCCCACA+TGG | + | chr5.4:78146422-78146441 | None:intergenic | 50.0% | |
| ATCAACCTTGTCCATGGAGC+TGG | + | chr5.4:78147524-78147543 | None:intergenic | 50.0% | |
| CAACTTCTGCAAAGGCTGCT+TGG | - | chr5.4:78148361-78148380 | MS.gene020984:intron | 50.0% | |
| CAGTGGTGTAGCATGTGTCA+GGG | + | chr5.4:78146646-78146665 | None:intergenic | 50.0% | |
| CGGCTTCTTACTTTGTGGTG+GGG | + | chr5.4:78148044-78148063 | None:intergenic | 50.0% | |
| CTCAAAGTGGACGCAGTTTG+CGG | - | chr5.4:78148426-78148445 | MS.gene020984:intron | 50.0% | |
| CTCAGCTATGTCAGTTGCAC+AGG | + | chr5.4:78148480-78148499 | None:intergenic | 50.0% | |
| GAAGCAGGAGTGAGATACGA+TGG | - | chr5.4:78147291-78147310 | MS.gene020984:intron | 50.0% | |
| GAATGATCCTTCGTTGACGG+AGG | - | chr5.4:78145283-78145302 | MS.gene020984:CDS | 50.0% | |
| GACTGCAATTCCACCGAAGA+TGG | - | chr5.4:78146496-78146515 | MS.gene020984:intron | 50.0% | |
| GATAGAATCACTCCAGCGAC+AGG | - | chr5.4:78149196-78149215 | MS.gene020984:CDS | 50.0% | |
| GATAGGGTCATAAGGTCTGC+AGG | - | chr5.4:78147471-78147490 | MS.gene020984:CDS | 50.0% | |
| GCAACCACAAACACCCAGAT+AGG | + | chr5.4:78147571-78147590 | None:intergenic | 50.0% | |
| GCAGCAGCAACAACATCACT+TGG | + | chr5.4:78145212-78145231 | None:intergenic | 50.0% | |
| GCTATGTCAGTTGCACAGGT+AGG | + | chr5.4:78148476-78148495 | None:intergenic | 50.0% | |
| GGAAAGGCTAATGCTTGCAG+TGG | - | chr5.4:78146683-78146702 | MS.gene020984:intron | 50.0% | |
| GGCTTCTTACTTTGTGGTGG+GGG | + | chr5.4:78148043-78148062 | None:intergenic | 50.0% | |
| GGGAGGATAGGATGGAATGT+AGG | - | chr5.4:78146801-78146820 | MS.gene020984:CDS | 50.0% | |
| GTTGGAACAACAGGGAGACA+TGG | + | chr5.4:78145146-78145165 | None:intergenic | 50.0% | |
| TCAGTGGTGTAGCATGTGTC+AGG | + | chr5.4:78146647-78146666 | None:intergenic | 50.0% | |
| TCGCCCACTACCTACTGTTA+AGG | - | chr5.4:78147674-78147693 | MS.gene020984:CDS | 50.0% | |
| TCGTATCTCACTCCTGCTTC+CGG | + | chr5.4:78147291-78147310 | None:intergenic | 50.0% | |
| TGGTTCCTTTACACCGGAAG+CGG | - | chr5.4:78146935-78146954 | MS.gene020984:intron | 50.0% | |
| TGTAGACGACGAGGATCATG+GGG | - | chr5.4:78146910-78146929 | MS.gene020984:intron | 50.0% | |
| TTCAGGAGGAAAAGGGCTGT+TGG | - | chr5.4:78148005-78148024 | MS.gene020984:CDS | 50.0% | |
| TTCTCTTCCTCCGTCAACGA+AGG | + | chr5.4:78145293-78145312 | None:intergenic | 50.0% | |
| TTCTGCAAAGGCTGCTTGGA+GGG | - | chr5.4:78148365-78148384 | MS.gene020984:intron | 50.0% | |
| TTGCGAACCAGTTGCCGAAA+AGG | - | chr5.4:78147037-78147056 | MS.gene020984:intron | 50.0% | |
| ! | AGGATAGCCTTTTCGGCAAC+TGG | + | chr5.4:78147047-78147066 | None:intergenic | 50.0% |
| ! | GCTCATTTTCCCCATGTTGC+TGG | - | chr5.4:78146833-78146852 | MS.gene020984:intron | 50.0% |
| ! | TTGCTGGTCAGAGTACCTAC+GGG | - | chr5.4:78146858-78146877 | MS.gene020984:intron | 50.0% |
| !! | GCCAACTGTGCGTTGATTCT+TGG | + | chr5.4:78146530-78146549 | None:intergenic | 50.0% |
| !! | TTAACAGTAGGTAGTGGGCG+AGG | + | chr5.4:78147675-78147694 | None:intergenic | 50.0% |
| ACAAGATCCCCCGCAACAGA+CGG | + | chr5.4:78145242-78145261 | None:intergenic | 55.0% | |
| AGGAACAGGGCGACTCAAAG+TGG | - | chr5.4:78148413-78148432 | MS.gene020984:intron | 55.0% | |
| AGGAACCGTGGGGTTCTTGT+TGG | - | chr5.4:78146770-78146789 | MS.gene020984:CDS | 55.0% | |
| ATGAGCCAGCTCCATGGACA+AGG | - | chr5.4:78147516-78147535 | MS.gene020984:CDS | 55.0% | |
| CAAGGCTGTGGTGAATGTGG+AGG | - | chr5.4:78149406-78149425 | MS.gene020984:CDS | 55.0% | |
| CACCTTCCTTGTGACGCTGA+CGG | - | chr5.4:78145041-78145060 | MS.gene020984:CDS | 55.0% | |
| CATACACCGTCAGCGTCACA+AGG | + | chr5.4:78145050-78145069 | None:intergenic | 55.0% | |
| CCAGCAATGCCAGCAACATG+GGG | + | chr5.4:78146845-78146864 | None:intergenic | 55.0% | |
| CCGTATGGCCAAGCTAGCTA+GGG | - | chr5.4:78146559-78146578 | MS.gene020984:intron | 55.0% | |
| CTTCTGCAAAGGCTGCTTGG+AGG | - | chr5.4:78148364-78148383 | MS.gene020984:intron | 55.0% | |
| GACCAGCAATGCCAGCAACA+TGG | + | chr5.4:78146847-78146866 | None:intergenic | 55.0% | |
| GAGACCTCGGTCTCTTCATC+CGG | + | chr5.4:78149293-78149312 | None:intergenic | 55.0% | |
| GCAAAACCTGCACAGCACCA+TGG | - | chr5.4:78145114-78145133 | MS.gene020984:CDS | 55.0% | |
| GCTCAATCTGTCGCTCTCTC+GGG | - | chr5.4:78146881-78146900 | MS.gene020984:intron | 55.0% | |
| GGCTCAATCTGTCGCTCTCT+CGG | - | chr5.4:78146880-78146899 | MS.gene020984:intron | 55.0% | |
| GGGAGACATGGAACATGCCA+TGG | + | chr5.4:78145134-78145153 | None:intergenic | 55.0% | |
| GGGGAGTGGTTCCTTTACAC+CGG | - | chr5.4:78146929-78146948 | MS.gene020984:intron | 55.0% | |
| GGGTGGTTATGTAGACGACG+AGG | - | chr5.4:78146901-78146920 | MS.gene020984:intron | 55.0% | |
| GTGACAATGAGCCAGCTCCA+TGG | - | chr5.4:78147510-78147529 | MS.gene020984:CDS | 55.0% | |
| GTTGGCGATTGCGATCCGTA+TGG | - | chr5.4:78146544-78146563 | MS.gene020984:intron | 55.0% | |
| TCCGTATGGCCAAGCTAGCT+AGG | - | chr5.4:78146558-78146577 | MS.gene020984:intron | 55.0% | |
| TCCTCTTATGCACCGGAAGC+AGG | - | chr5.4:78147276-78147295 | MS.gene020984:intron | 55.0% | |
| TCCTGCTTCCGGTGCATAAG+AGG | + | chr5.4:78147280-78147299 | None:intergenic | 55.0% | |
| TGACGCTGACGGTGTATGCA+TGG | - | chr5.4:78145052-78145071 | MS.gene020984:CDS | 55.0% | |
| TGGCAAGGCTGTGGTGAATG+TGG | - | chr5.4:78149403-78149422 | MS.gene020984:CDS | 55.0% | |
| TTACACCGGAAGCGGTGGAA+GGG | - | chr5.4:78146943-78146962 | MS.gene020984:intron | 55.0% | |
| TTCCACCGCTTCCGGTGTAA+AGG | + | chr5.4:78146943-78146962 | None:intergenic | 55.0% | |
| TTCCTTTACACCGGAAGCGG+TGG | - | chr5.4:78146938-78146957 | MS.gene020984:intron | 55.0% | |
| TTTACACCGGAAGCGGTGGA+AGG | - | chr5.4:78146942-78146961 | MS.gene020984:intron | 55.0% | |
| ! | AGGAAAAGGGCTGTTGGCTG+TGG | - | chr5.4:78148011-78148030 | MS.gene020984:CDS | 55.0% |
| ! | CCCTAGCTAGCTTGGCCATA+CGG | + | chr5.4:78146562-78146581 | None:intergenic | 55.0% |
| ! | TGCTGGTCAGAGTACCTACG+GGG | - | chr5.4:78146859-78146878 | MS.gene020984:intron | 55.0% |
| !! | AACATGCCATGGTGCTGTGC+AGG | + | chr5.4:78145123-78145142 | None:intergenic | 55.0% |
| !! | AGGTGATGATGGCAAGGCTG+TGG | - | chr5.4:78149394-78149413 | MS.gene020984:CDS | 55.0% |
| !! | GGATTAGTCGCCATCTTCGG+TGG | + | chr5.4:78146509-78146528 | None:intergenic | 55.0% |
| !!! | TGCTTGGAGGGTGCCTTTTC+TGG | - | chr5.4:78148377-78148396 | MS.gene020984:intron | 55.0% |
| ACCCTCTGCCCTAGCTAGCT+TGG | + | chr5.4:78146570-78146589 | None:intergenic | 60.0% | |
| ACGACGAGGATCATGGGGAG+TGG | - | chr5.4:78146915-78146934 | MS.gene020984:intron | 60.0% | |
| AGCGACAGATTGAGCCCCGT+AGG | + | chr5.4:78146876-78146895 | None:intergenic | 60.0% | |
| AGCGGTGGAAGGGATCTCAG+TGG | - | chr5.4:78146953-78146972 | MS.gene020984:intron | 60.0% | |
| CAAGCCGGATGAAGAGACCG+AGG | - | chr5.4:78149286-78149305 | MS.gene020984:CDS | 60.0% | |
| CAATCTGTCGCTCTCTCGGG+TGG | - | chr5.4:78146884-78146903 | MS.gene020984:intron | 60.0% | |
| CACCGTCAGCGTCACAAGGA+AGG | + | chr5.4:78145046-78145065 | None:intergenic | 60.0% | |
| CCAGCGACAGGCTGAACAAC+AGG | - | chr5.4:78149208-78149227 | MS.gene020984:CDS | 60.0% | |
| CCCCATGTTGCTGGCATTGC+TGG | - | chr5.4:78146842-78146861 | MS.gene020984:intron | 60.0% | |
| CCTGTTGTTCAGCCTGTCGC+TGG | + | chr5.4:78149211-78149230 | None:intergenic | 60.0% | |
| CGTCAGCGTCACAAGGAAGG+TGG | + | chr5.4:78145043-78145062 | None:intergenic | 60.0% | |
| GAGATCCCTTCCACCGCTTC+CGG | + | chr5.4:78146951-78146970 | None:intergenic | 60.0% | |
| GCCAAGCTAGCTAGGGCAGA+GGG | - | chr5.4:78146566-78146585 | MS.gene020984:intron | 60.0% | |
| GCGGTGGAAGGGATCTCAGT+GGG | - | chr5.4:78146954-78146973 | MS.gene020984:intron | 60.0% | |
| TGCTGCTGCTCCGTCTGTTG+CGG | - | chr5.4:78145229-78145248 | MS.gene020984:CDS | 60.0% | |
| ! | CTAGCTAGGGCAGAGGGTGT+TGG | - | chr5.4:78146572-78146591 | MS.gene020984:intron | 60.0% |
| !! | CAGTAGGTAGTGGGCGAGGA+CGG | + | chr5.4:78147671-78147690 | None:intergenic | 60.0% |
| CTGCTGCTCCGTCTGTTGCG+GGG | - | chr5.4:78145231-78145250 | MS.gene020984:CDS | 65.0% | |
| GCTGCTGCTCCGTCTGTTGC+GGG | - | chr5.4:78145230-78145249 | MS.gene020984:CDS | 65.0% | |
| GGCCAAGCTAGCTAGGGCAG+AGG | - | chr5.4:78146565-78146584 | MS.gene020984:intron | 65.0% | |
| TGCTGCTCCGTCTGTTGCGG+GGG | - | chr5.4:78145232-78145251 | MS.gene020984:CDS | 65.0% | |
| !! | GCTAGGGCAGAGGGTGTTGG+TGG | - | chr5.4:78146575-78146594 | MS.gene020984:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 78145023 | 78149478 | 78145023 | ID=MS.gene020984 |
| chr5.4 | mRNA | 78145023 | 78149478 | 78145023 | ID=MS.gene020984.t1;Parent=MS.gene020984 |
| chr5.4 | exon | 78149047 | 78149478 | 78149047 | ID=MS.gene020984.t1.exon1;Parent=MS.gene020984.t1 |
| chr5.4 | CDS | 78149047 | 78149478 | 78149047 | ID=cds.MS.gene020984.t1;Parent=MS.gene020984.t1 |
| chr5.4 | exon | 78147421 | 78148085 | 78147421 | ID=MS.gene020984.t1.exon2;Parent=MS.gene020984.t1 |
| chr5.4 | CDS | 78147421 | 78148085 | 78147421 | ID=cds.MS.gene020984.t1;Parent=MS.gene020984.t1 |
| chr5.4 | exon | 78147145 | 78147244 | 78147145 | ID=MS.gene020984.t1.exon3;Parent=MS.gene020984.t1 |
| chr5.4 | CDS | 78147145 | 78147244 | 78147145 | ID=cds.MS.gene020984.t1;Parent=MS.gene020984.t1 |
| chr5.4 | exon | 78146964 | 78147025 | 78146964 | ID=MS.gene020984.t1.exon4;Parent=MS.gene020984.t1 |
| chr5.4 | CDS | 78146964 | 78147025 | 78146964 | ID=cds.MS.gene020984.t1;Parent=MS.gene020984.t1 |
| chr5.4 | exon | 78146746 | 78146848 | 78146746 | ID=MS.gene020984.t1.exon5;Parent=MS.gene020984.t1 |
| chr5.4 | CDS | 78146746 | 78146848 | 78146746 | ID=cds.MS.gene020984.t1;Parent=MS.gene020984.t1 |
| chr5.4 | exon | 78146341 | 78146491 | 78146341 | ID=MS.gene020984.t1.exon6;Parent=MS.gene020984.t1 |
| chr5.4 | CDS | 78146341 | 78146491 | 78146341 | ID=cds.MS.gene020984.t1;Parent=MS.gene020984.t1 |
| chr5.4 | exon | 78145984 | 78146201 | 78145984 | ID=MS.gene020984.t1.exon7;Parent=MS.gene020984.t1 |
| chr5.4 | CDS | 78145984 | 78146201 | 78145984 | ID=cds.MS.gene020984.t1;Parent=MS.gene020984.t1 |
| chr5.4 | exon | 78145023 | 78145328 | 78145023 | ID=MS.gene020984.t1.exon8;Parent=MS.gene020984.t1 |
| chr5.4 | CDS | 78145023 | 78145328 | 78145023 | ID=cds.MS.gene020984.t1;Parent=MS.gene020984.t1 |
| Gene Sequence |
| Protein sequence |
