Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38118.t1 | XP_003618072.2 | 95 | 542 | 27 | 0 | 1 | 542 | 137 | 678 | 1.70E-271 | 944.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38118.t1 | Q8VYZ0 | 69.4 | 458 | 129 | 5 | 1 | 455 | 150 | 599 | 7.0e-194 | 678.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38118.t1 | G7K0P6 | 95.0 | 542 | 27 | 0 | 1 | 542 | 137 | 678 | 1.2e-271 | 944.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene38118 | -0.841953 | 3.47E-58 | -1.69E-46 |
| MS.gene04921 | MS.gene38118 | 0.828716 | 7.70E-55 | -1.69E-46 |
| MS.gene049251 | MS.gene38118 | 0.834761 | 2.49E-56 | -1.69E-46 |
| MS.gene049596 | MS.gene38118 | 0.813247 | 2.82E-51 | -1.69E-46 |
| MS.gene049633 | MS.gene38118 | -0.838331 | 3.06E-57 | -1.69E-46 |
| MS.gene049865 | MS.gene38118 | -0.806661 | 7.38E-50 | -1.69E-46 |
| MS.gene050071 | MS.gene38118 | 0.838532 | 2.72E-57 | -1.69E-46 |
| MS.gene050170 | MS.gene38118 | -0.900319 | 8.25E-78 | -1.69E-46 |
| MS.gene050323 | MS.gene38118 | -0.845616 | 3.63E-59 | -1.69E-46 |
| MS.gene050338 | MS.gene38118 | 0.829092 | 6.24E-55 | -1.69E-46 |
| MS.gene050496 | MS.gene38118 | -0.876033 | 1.93E-68 | -1.69E-46 |
| MS.gene050504 | MS.gene38118 | -0.819922 | 9.01E-53 | -1.69E-46 |
| MS.gene050577 | MS.gene38118 | -0.863251 | 2.85E-64 | -1.69E-46 |
| MS.gene050612 | MS.gene38118 | -0.825153 | 5.47E-54 | -1.69E-46 |
| MS.gene050697 | MS.gene38118 | -0.807794 | 4.25E-50 | -1.69E-46 |
| MS.gene050699 | MS.gene38118 | -0.811289 | 7.54E-51 | -1.69E-46 |
| MS.gene05080 | MS.gene38118 | -0.802835 | 4.65E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene38118 | -0.842819 | 2.05E-58 | -1.69E-46 |
| MS.gene050871 | MS.gene38118 | -0.838906 | 2.18E-57 | -1.69E-46 |
| MS.gene050904 | MS.gene38118 | -0.875179 | 3.78E-68 | -1.69E-46 |
| MS.gene050986 | MS.gene38118 | -0.808325 | 3.27E-50 | -1.69E-46 |
| MS.gene05124 | MS.gene38118 | 0.808115 | 3.63E-50 | -1.69E-46 |
| MS.gene051268 | MS.gene38118 | -0.805662 | 1.20E-49 | -1.69E-46 |
| MS.gene051317 | MS.gene38118 | -0.83259 | 8.67E-56 | -1.69E-46 |
| MS.gene051651 | MS.gene38118 | 0.830424 | 2.96E-55 | -1.69E-46 |
| MS.gene052066 | MS.gene38118 | -0.802113 | 6.54E-49 | -1.69E-46 |
| MS.gene052143 | MS.gene38118 | 0.811956 | 5.40E-51 | -1.69E-46 |
| MS.gene052164 | MS.gene38118 | -0.810529 | 1.10E-50 | -1.69E-46 |
| MS.gene052367 | MS.gene38118 | 0.80811 | 3.64E-50 | -1.69E-46 |
| MS.gene052482 | MS.gene38118 | -0.835856 | 1.32E-56 | -1.69E-46 |
| MS.gene052486 | MS.gene38118 | -0.829953 | 3.86E-55 | -1.69E-46 |
| MS.gene052494 | MS.gene38118 | 0.825742 | 3.97E-54 | -1.69E-46 |
| MS.gene052503 | MS.gene38118 | -0.808565 | 2.91E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene38118 | -0.814797 | 1.28E-51 | -1.69E-46 |
| MS.gene052825 | MS.gene38118 | -0.810759 | 9.83E-51 | -1.69E-46 |
| MS.gene053097 | MS.gene38118 | 0.840168 | 1.02E-57 | -1.69E-46 |
| MS.gene053173 | MS.gene38118 | 0.826473 | 2.66E-54 | -1.69E-46 |
| MS.gene053203 | MS.gene38118 | -0.826317 | 2.90E-54 | -1.69E-46 |
| MS.gene053479 | MS.gene38118 | -0.818283 | 2.13E-52 | -1.69E-46 |
| MS.gene053480 | MS.gene38118 | -0.827535 | 1.48E-54 | -1.69E-46 |
| MS.gene053824 | MS.gene38118 | -0.820016 | 8.57E-53 | -1.69E-46 |
| MS.gene054343 | MS.gene38118 | -0.83294 | 7.09E-56 | -1.69E-46 |
| MS.gene054344 | MS.gene38118 | -0.867199 | 1.63E-65 | -1.69E-46 |
| MS.gene054551 | MS.gene38118 | 0.805336 | 1.40E-49 | -1.69E-46 |
| MS.gene054633 | MS.gene38118 | 0.822684 | 2.08E-53 | -1.69E-46 |
| MS.gene054643 | MS.gene38118 | 0.814277 | 1.67E-51 | -1.69E-46 |
| MS.gene05470 | MS.gene38118 | -0.881697 | 1.93E-70 | -1.69E-46 |
| MS.gene054851 | MS.gene38118 | 0.830854 | 2.32E-55 | -1.69E-46 |
| MS.gene054954 | MS.gene38118 | -0.824863 | 6.41E-54 | -1.69E-46 |
| MS.gene054999 | MS.gene38118 | 0.817781 | 2.76E-52 | -1.69E-46 |
| MS.gene055134 | MS.gene38118 | 0.820912 | 5.34E-53 | -1.69E-46 |
| MS.gene055251 | MS.gene38118 | 0.892286 | 1.83E-74 | -1.69E-46 |
| MS.gene055331 | MS.gene38118 | 0.829511 | 4.94E-55 | -1.69E-46 |
| MS.gene055362 | MS.gene38118 | -0.802906 | 4.49E-49 | -1.69E-46 |
| MS.gene055502 | MS.gene38118 | -0.807821 | 4.19E-50 | -1.69E-46 |
| MS.gene055577 | MS.gene38118 | -0.811544 | 6.64E-51 | -1.69E-46 |
| MS.gene055719 | MS.gene38118 | 0.80257 | 5.27E-49 | -1.69E-46 |
| MS.gene055748 | MS.gene38118 | -0.842149 | 3.08E-58 | -1.69E-46 |
| MS.gene055750 | MS.gene38118 | -0.833542 | 5.02E-56 | -1.69E-46 |
| MS.gene055751 | MS.gene38118 | -0.858007 | 1.11E-62 | -1.69E-46 |
| MS.gene055776 | MS.gene38118 | -0.820494 | 6.66E-53 | -1.69E-46 |
| MS.gene05589 | MS.gene38118 | -0.900875 | 4.73E-78 | -1.69E-46 |
| MS.gene056198 | MS.gene38118 | 0.808494 | 3.01E-50 | -1.69E-46 |
| MS.gene056266 | MS.gene38118 | -0.894053 | 3.54E-75 | -1.69E-46 |
| MS.gene056387 | MS.gene38118 | -0.828107 | 1.08E-54 | -1.69E-46 |
| MS.gene056504 | MS.gene38118 | -0.874236 | 7.91E-68 | -1.69E-46 |
| MS.gene056510 | MS.gene38118 | -0.820014 | 8.58E-53 | -1.69E-46 |
| MS.gene056692 | MS.gene38118 | -0.806196 | 9.25E-50 | -1.69E-46 |
| MS.gene056694 | MS.gene38118 | 0.849198 | 3.77E-60 | -1.69E-46 |
| MS.gene056697 | MS.gene38118 | 0.821855 | 3.23E-53 | -1.69E-46 |
| MS.gene057367 | MS.gene38118 | 0.83018 | 3.40E-55 | -1.69E-46 |
| MS.gene058334 | MS.gene38118 | 0.861622 | 9.02E-64 | -1.69E-46 |
| MS.gene05837 | MS.gene38118 | -0.809693 | 1.67E-50 | -1.69E-46 |
| MS.gene058382 | MS.gene38118 | 0.846057 | 2.76E-59 | -1.69E-46 |
| MS.gene058419 | MS.gene38118 | -0.812906 | 3.35E-51 | -1.69E-46 |
| MS.gene058838 | MS.gene38118 | -0.820471 | 6.74E-53 | -1.69E-46 |
| MS.gene059022 | MS.gene38118 | -0.810129 | 1.34E-50 | -1.69E-46 |
| MS.gene059023 | MS.gene38118 | -0.851966 | 6.29E-61 | -1.69E-46 |
| MS.gene05926 | MS.gene38118 | 0.810758 | 9.83E-51 | -1.69E-46 |
| MS.gene059304 | MS.gene38118 | 0.804092 | 2.55E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene38118 | -0.818854 | 1.58E-52 | -1.69E-46 |
| MS.gene059677 | MS.gene38118 | -0.805613 | 1.23E-49 | -1.69E-46 |
| MS.gene059837 | MS.gene38118 | -0.85948 | 4.02E-63 | -1.69E-46 |
| MS.gene059865 | MS.gene38118 | -0.843604 | 1.26E-58 | -1.69E-46 |
| MS.gene05996 | MS.gene38118 | -0.806519 | 7.91E-50 | -1.69E-46 |
| MS.gene06000 | MS.gene38118 | -0.878297 | 3.15E-69 | -1.69E-46 |
| MS.gene060076 | MS.gene38118 | 0.843348 | 1.48E-58 | -1.69E-46 |
| MS.gene06027 | MS.gene38118 | -0.815704 | 8.07E-52 | -1.69E-46 |
| MS.gene06042 | MS.gene38118 | 0.829779 | 4.25E-55 | -1.69E-46 |
| MS.gene060593 | MS.gene38118 | 0.805104 | 1.57E-49 | -1.69E-46 |
| MS.gene060595 | MS.gene38118 | 0.823496 | 1.34E-53 | -1.69E-46 |
| MS.gene060703 | MS.gene38118 | -0.807784 | 4.27E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene38118 | -0.826017 | 3.42E-54 | -1.69E-46 |
| MS.gene060778 | MS.gene38118 | -0.830581 | 2.71E-55 | -1.69E-46 |
| MS.gene06077 | MS.gene38118 | -0.836921 | 7.05E-57 | -1.69E-46 |
| MS.gene06093 | MS.gene38118 | 0.801099 | 1.06E-48 | -1.69E-46 |
| MS.gene060982 | MS.gene38118 | -0.879584 | 1.11E-69 | -1.69E-46 |
| MS.gene061044 | MS.gene38118 | 0.911914 | 3.54E-83 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene066358 | MS.gene38118 | PPI |
| MS.gene049074 | MS.gene38118 | PPI |
| MS.gene017484 | MS.gene38118 | PPI |
| MS.gene38118 | MS.gene020984 | PPI |
| MS.gene015803 | MS.gene38118 | PPI |
| MS.gene066359 | MS.gene38118 | PPI |
| MS.gene38118 | MS.gene87801 | PPI |
| MS.gene034581 | MS.gene38118 | PPI |
| MS.gene38118 | MS.gene05870 | PPI |
| MS.gene38118 | MS.gene39153 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38118.t1 | MTR_5g098680 | 95.387 | 542 | 25 | 0 | 1 | 542 | 137 | 678 | 0.0 | 1040 |
| MS.gene38118.t1 | MTR_8g102580 | 84.899 | 543 | 77 | 2 | 1 | 542 | 130 | 668 | 0.0 | 929 |
| MS.gene38118.t1 | MTR_3g114910 | 68.116 | 345 | 76 | 2 | 1 | 345 | 81 | 391 | 3.25e-173 | 495 |
| MS.gene38118.t1 | MTR_6g053210 | 40.506 | 237 | 46 | 5 | 28 | 264 | 84 | 225 | 2.22e-40 | 149 |
| MS.gene38118.t1 | MTR_6g053210 | 58.974 | 78 | 32 | 0 | 465 | 542 | 233 | 310 | 6.95e-19 | 88.2 |
| MS.gene38118.t1 | MTR_6g061270 | 35.789 | 190 | 104 | 7 | 131 | 308 | 223 | 406 | 9.80e-22 | 99.8 |
| MS.gene38118.t1 | MTR_6g061200 | 33.333 | 195 | 112 | 6 | 131 | 313 | 223 | 411 | 1.84e-20 | 95.5 |
| MS.gene38118.t1 | MTR_7g084090 | 35.602 | 191 | 104 | 7 | 131 | 308 | 285 | 469 | 3.35e-20 | 94.7 |
| MS.gene38118.t1 | MTR_7g084090 | 35.602 | 191 | 104 | 7 | 131 | 308 | 285 | 469 | 4.44e-20 | 94.7 |
| MS.gene38118.t1 | MTR_1g035420 | 37.179 | 156 | 85 | 3 | 131 | 279 | 217 | 366 | 1.12e-18 | 90.1 |
| MS.gene38118.t1 | MTR_8g070070 | 37.342 | 158 | 85 | 4 | 131 | 279 | 325 | 477 | 2.52e-16 | 82.8 |
| MS.gene38118.t1 | MTR_8g071030 | 36.076 | 158 | 87 | 4 | 131 | 279 | 305 | 457 | 3.97e-16 | 82.0 |
| MS.gene38118.t1 | MTR_8g070075 | 34.810 | 158 | 89 | 3 | 131 | 279 | 318 | 470 | 7.12e-16 | 81.3 |
| MS.gene38118.t1 | MTR_4g010550 | 34.615 | 156 | 85 | 4 | 131 | 280 | 49 | 193 | 1.35e-15 | 79.7 |
| MS.gene38118.t1 | MTR_7g088370 | 32.716 | 162 | 91 | 4 | 131 | 284 | 263 | 414 | 7.22e-15 | 78.2 |
| MS.gene38118.t1 | MTR_5g013420 | 33.333 | 153 | 91 | 3 | 131 | 280 | 643 | 787 | 2.33e-14 | 76.6 |
| MS.gene38118.t1 | MTR_5g013420 | 33.333 | 153 | 91 | 3 | 131 | 280 | 643 | 787 | 2.37e-14 | 76.6 |
| MS.gene38118.t1 | MTR_1g035400 | 34.177 | 158 | 89 | 5 | 131 | 279 | 134 | 285 | 6.81e-13 | 71.6 |
| MS.gene38118.t1 | MTR_6g044690 | 32.911 | 158 | 85 | 5 | 131 | 280 | 137 | 281 | 9.80e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38118.t1 | AT1G57820 | 65.663 | 498 | 160 | 5 | 1 | 495 | 150 | 639 | 0.0 | 691 |
| MS.gene38118.t1 | AT1G57820 | 65.663 | 498 | 160 | 5 | 1 | 495 | 150 | 639 | 0.0 | 691 |
| MS.gene38118.t1 | AT1G57820 | 65.060 | 498 | 160 | 6 | 1 | 495 | 150 | 636 | 0.0 | 680 |
| MS.gene38118.t1 | AT5G39550 | 64.668 | 467 | 150 | 6 | 1 | 465 | 133 | 586 | 0.0 | 626 |
| MS.gene38118.t1 | AT1G66040 | 65.939 | 458 | 144 | 5 | 1 | 456 | 133 | 580 | 0.0 | 626 |
| MS.gene38118.t1 | AT1G66050 | 65.939 | 458 | 144 | 5 | 1 | 456 | 133 | 580 | 0.0 | 626 |
| MS.gene38118.t1 | AT1G57800 | 60.040 | 498 | 186 | 9 | 9 | 500 | 170 | 660 | 0.0 | 606 |
| MS.gene38118.t1 | AT1G57800 | 59.557 | 497 | 186 | 9 | 9 | 500 | 170 | 656 | 0.0 | 598 |
| MS.gene38118.t1 | AT4G08590 | 59.821 | 336 | 119 | 5 | 2 | 336 | 114 | 434 | 2.73e-146 | 429 |
| MS.gene38118.t1 | AT4G08590 | 60.661 | 333 | 114 | 6 | 2 | 332 | 114 | 431 | 3.04e-145 | 426 |
| MS.gene38118.t1 | AT4G08590 | 60.625 | 320 | 109 | 6 | 2 | 319 | 114 | 418 | 5.62e-139 | 409 |
| MS.gene38118.t1 | AT4G08590 | 60.563 | 284 | 95 | 6 | 2 | 283 | 114 | 382 | 3.18e-120 | 360 |
| MS.gene38118.t1 | AT4G08590 | 58.647 | 266 | 94 | 5 | 2 | 266 | 114 | 364 | 6.40e-108 | 327 |
| MS.gene38118.t1 | AT4G08590 | 58.647 | 266 | 94 | 5 | 2 | 266 | 114 | 364 | 6.40e-108 | 327 |
| MS.gene38118.t1 | AT5G13960 | 31.429 | 245 | 132 | 8 | 131 | 359 | 153 | 377 | 1.00e-18 | 90.1 |
| MS.gene38118.t1 | AT5G13960 | 30.864 | 243 | 136 | 7 | 131 | 359 | 19 | 243 | 1.40e-18 | 89.4 |
| MS.gene38118.t1 | AT2G22740 | 36.774 | 155 | 92 | 3 | 131 | 280 | 334 | 487 | 5.21e-18 | 88.2 |
| MS.gene38118.t1 | AT2G22740 | 36.774 | 155 | 92 | 3 | 131 | 280 | 334 | 487 | 5.21e-18 | 88.2 |
| MS.gene38118.t1 | AT2G35160 | 34.375 | 192 | 105 | 7 | 131 | 312 | 333 | 513 | 1.24e-16 | 84.0 |
| MS.gene38118.t1 | AT2G35160 | 34.375 | 192 | 105 | 7 | 131 | 312 | 369 | 549 | 1.62e-16 | 83.6 |
| MS.gene38118.t1 | AT2G35160 | 34.375 | 192 | 105 | 7 | 131 | 312 | 369 | 549 | 1.62e-16 | 83.6 |
| MS.gene38118.t1 | AT2G35160 | 34.375 | 192 | 105 | 7 | 131 | 312 | 369 | 549 | 1.62e-16 | 83.6 |
| MS.gene38118.t1 | AT2G35160 | 34.375 | 192 | 105 | 7 | 131 | 312 | 369 | 549 | 1.62e-16 | 83.6 |
| MS.gene38118.t1 | AT5G04940 | 36.970 | 165 | 85 | 6 | 131 | 285 | 215 | 370 | 3.05e-16 | 82.4 |
| MS.gene38118.t1 | AT5G04940 | 36.970 | 165 | 85 | 6 | 131 | 285 | 215 | 370 | 3.05e-16 | 82.4 |
| MS.gene38118.t1 | AT2G33290 | 36.943 | 157 | 84 | 5 | 131 | 280 | 211 | 359 | 2.42e-15 | 79.7 |
| MS.gene38118.t1 | AT2G33290 | 36.943 | 157 | 84 | 5 | 131 | 280 | 211 | 359 | 2.42e-15 | 79.7 |
| MS.gene38118.t1 | AT2G33290 | 36.943 | 157 | 84 | 5 | 131 | 280 | 211 | 359 | 2.42e-15 | 79.7 |
| MS.gene38118.t1 | AT2G33290 | 36.943 | 157 | 84 | 5 | 131 | 280 | 211 | 359 | 2.42e-15 | 79.7 |
| MS.gene38118.t1 | AT4G13460 | 35.928 | 167 | 86 | 5 | 131 | 287 | 209 | 364 | 1.32e-14 | 77.4 |
| MS.gene38118.t1 | AT4G13460 | 35.928 | 167 | 86 | 5 | 131 | 287 | 209 | 364 | 1.32e-14 | 77.4 |
| MS.gene38118.t1 | AT1G73100 | 35.032 | 157 | 87 | 5 | 131 | 280 | 212 | 360 | 8.94e-12 | 68.2 |
| MS.gene38118.t1 | AT1G17770 | 31.707 | 164 | 88 | 5 | 131 | 283 | 231 | 381 | 3.96e-11 | 66.2 |
Find 170 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCCATGTTGCTGGCATTGC+TGG | 0.208993 | 5.1:-79498796 | MS.gene38118:CDS |
| GCCAACTGTGCGTTGATTCT+TGG | 0.223531 | 5.1:+79499111 | None:intergenic |
| ACTATCCCAAAGGATCATTT+TGG | 0.243586 | 5.1:-79498919 | MS.gene38118:CDS |
| GAACAGATGGAGGAGAATTC+TGG | 0.311936 | 5.1:-79496405 | MS.gene38118:CDS |
| GGCTCAATCTGTCGCTCTCT+CGG | 0.312147 | 5.1:-79498758 | MS.gene38118:CDS |
| GGGTTCTTGTTGGTGATACT+TGG | 0.318104 | 5.1:-79498858 | MS.gene38118:CDS |
| AAGGACGGCTTTATAGCTTT+TGG | 0.324277 | 5.1:+79497526 | None:intergenic |
| AGAACCCCACGGTTCCTATT+AGG | 0.346266 | 5.1:+79498874 | None:intergenic |
| TTTCTGGCCAAAGCTATATC+AGG | 0.361815 | 5.1:-79497245 | MS.gene38118:CDS |
| GAGATCCCTTCCACCGCTTC+CGG | 0.367014 | 5.1:+79498690 | None:intergenic |
| ATCGGTCCAAAATGATCCTT+TGG | 0.370324 | 5.1:+79498913 | None:intergenic |
| TCGTATCTCACTCCTGCTTC+CGG | 0.373745 | 5.1:+79498350 | None:intergenic |
| TTGATCTGCAGTGATTTAAC+TGG | 0.374427 | 5.1:-79497996 | MS.gene38118:intron |
| GTCTACATTTCAGGAGGAAA+AGG | 0.376345 | 5.1:-79497641 | MS.gene38118:intron |
| CCCTGTTCCTGATATAGCTT+TGG | 0.380875 | 5.1:+79497238 | None:intergenic |
| GCCAAAGCTATATCAGGAAC+AGG | 0.381465 | 5.1:-79497239 | MS.gene38118:CDS |
| TTGCTGAGTATGATCCTAAT+AGG | 0.386285 | 5.1:-79498888 | MS.gene38118:CDS |
| GCTATCCTGTTCGTGTTGTT+AGG | 0.395823 | 5.1:-79498579 | MS.gene38118:intron |
| TCAGTGGTGTAGCATGTGTC+AGG | 0.405321 | 5.1:+79498994 | None:intergenic |
| TTCATCGGCTTCTTACTTTG+TGG | 0.409729 | 5.1:+79497592 | None:intergenic |
| TCCTGCTTCCGGTGCATAAG+AGG | 0.411847 | 5.1:+79498361 | None:intergenic |
| GAGACCTCGGTCTCTTCATC+CGG | 0.413934 | 5.1:+79496348 | None:intergenic |
| CTTGGATTAGTCGCCATCTT+CGG | 0.417258 | 5.1:+79499129 | None:intergenic |
| GCCATTTCTCAAAACACTTC+AGG | 0.422976 | 5.1:+79499199 | None:intergenic |
| CCTGTTGTTCAGCCTGTCGC+TGG | 0.422987 | 5.1:+79496430 | None:intergenic |
| TCGGCTTCTTACTTTGTGGT+GGG | 0.424543 | 5.1:+79497596 | None:intergenic |
| ACCTACTGTTAAGGAGTTCA+AGG | 0.426796 | 5.1:-79497955 | MS.gene38118:CDS |
| ACAGGTTAACAGGGAAATGA+TGG | 0.429592 | 5.1:-79496469 | MS.gene38118:intron |
| CCAGCGACAGGCTGAACAAC+AGG | 0.433445 | 5.1:-79496430 | MS.gene38118:CDS |
| TAGGATGGAATGTAGGCAAT+GGG | 0.434316 | 5.1:-79498830 | MS.gene38118:CDS |
| CAAACTTCTGGTCAAATGAC+TGG | 0.435386 | 5.1:+79498641 | None:intergenic |
| CAACTTCTGCAAAGGCTGCT+TGG | 0.436051 | 5.1:-79497277 | MS.gene38118:CDS |
| CCTTTCTTCTTCTTCTGTGG+AGG | 0.445223 | 5.1:+79496267 | None:intergenic |
| TCACCTTTCTTCTTCTTCTG+TGG | 0.446054 | 5.1:+79496264 | None:intergenic |
| TCCTCTTATGCACCGGAAGC+AGG | 0.456225 | 5.1:-79498362 | MS.gene38118:CDS |
| ATCGGCTTCTTACTTTGTGG+TGG | 0.457795 | 5.1:+79497595 | None:intergenic |
| AAACAGTGGCTTGCAATTAG+AGG | 0.458150 | 5.1:-79496182 | None:intergenic |
| TGATACTTGGGAGGATAGGA+TGG | 0.459421 | 5.1:-79498845 | MS.gene38118:CDS |
| ATCAACCTTGTCCATGGAGC+TGG | 0.459843 | 5.1:+79498117 | None:intergenic |
| GGTTCTTGTTGGTGATACTT+GGG | 0.460044 | 5.1:-79498857 | MS.gene38118:CDS |
| TTGCGAACCAGTTGCCGAAA+AGG | 0.463278 | 5.1:-79498601 | MS.gene38118:CDS |
| ACCCTCTGCCCTAGCTAGCT+TGG | 0.468975 | 5.1:+79499071 | None:intergenic |
| GAGAAATGTTGGCGCAAAGT+TGG | 0.471436 | 5.1:-79498311 | MS.gene38118:CDS |
| ACTGAGAGAGCAAAGAAAAC+AGG | 0.475684 | 5.1:-79498976 | MS.gene38118:CDS |
| CTTACAGTAACAGGTCTCTC+AGG | 0.475890 | 5.1:+79500203 | None:intergenic |
| CCCTAGCTAGCTTGGCCATA+CGG | 0.475905 | 5.1:+79499079 | None:intergenic |
| GGCTTCTTACTTTGTGGTGG+GGG | 0.477531 | 5.1:+79497598 | None:intergenic |
| TTCTGCAAAGGCTGCTTGGA+GGG | 0.479805 | 5.1:-79497273 | MS.gene38118:CDS |
| ACGAACCTAACAACACGAAC+AGG | 0.481034 | 5.1:+79498574 | None:intergenic |
| CTCAGCTATGTCAGTTGCAC+AGG | 0.481756 | 5.1:+79497161 | None:intergenic |
| GCTCAATCTGTCGCTCTCTC+GGG | 0.483213 | 5.1:-79498757 | MS.gene38118:CDS |
| CAATATCTGTCGCAAGGTGT+TGG | 0.483430 | 5.1:-79497328 | MS.gene38118:CDS |
| TCGCCCACTACCTACTGTTA+AGG | 0.485754 | 5.1:-79497964 | MS.gene38118:CDS |
| GACTGCAATTCCACCGAAGA+TGG | 0.491750 | 5.1:-79499142 | MS.gene38118:CDS |
| GATATAGCTTTGGCCAGAAA+AGG | 0.492720 | 5.1:+79497248 | None:intergenic |
| TATGTAGACGACGAGGATCA+TGG | 0.492748 | 5.1:-79498730 | MS.gene38118:CDS |
| AACTCCTTAACAGTAGGTAG+TGG | 0.497268 | 5.1:+79497960 | None:intergenic |
| TCTACATTTCAGGAGGAAAA+GGG | 0.498002 | 5.1:-79497640 | MS.gene38118:intron |
| AGGAAAAGGGCTGTTGGCTG+TGG | 0.498699 | 5.1:-79497627 | MS.gene38118:CDS |
| CTCAAAGTGGACGCAGTTTG+CGG | 0.499275 | 5.1:-79497212 | MS.gene38118:CDS |
| TTCCACCGCTTCCGGTGTAA+AGG | 0.500920 | 5.1:+79498698 | None:intergenic |
| TGAGCACAAGGTGTAGTAAG+AGG | 0.501591 | 5.1:+79497300 | None:intergenic |
| GAAGTTTGAAAATATGAATG+AGG | 0.501935 | 5.1:-79498626 | MS.gene38118:CDS |
| CGTTGATATTACTGAAAGAA+AGG | 0.503780 | 5.1:-79497928 | MS.gene38118:CDS |
| TTGGTGATACTTGGGAGGAT+AGG | 0.509145 | 5.1:-79498849 | MS.gene38118:CDS |
| AGAGGAACGTTTCTCCTTGT+GGG | 0.509810 | 5.1:+79498379 | None:intergenic |
| AGGAACCGTGGGGTTCTTGT+TGG | 0.510062 | 5.1:-79498868 | MS.gene38118:CDS |
| ATTGCTGGTCAGAGTACCTA+CGG | 0.510813 | 5.1:-79498781 | MS.gene38118:CDS |
| ACCAGCAATGCCAGCAACAT+GGG | 0.512898 | 5.1:+79498795 | None:intergenic |
| TGGTTCCTTTACACCGGAAG+CGG | 0.515629 | 5.1:-79498703 | MS.gene38118:CDS |
| TCCGTATGGCCAAGCTAGCT+AGG | 0.518719 | 5.1:-79499080 | MS.gene38118:CDS |
| ATGTAGACGACGAGGATCAT+GGG | 0.519044 | 5.1:-79498729 | MS.gene38118:CDS |
| CTTCTGCAAAGGCTGCTTGG+AGG | 0.520625 | 5.1:-79497274 | MS.gene38118:CDS |
| GCTAGGGCAGAGGGTGTTGG+TGG | 0.520678 | 5.1:-79499063 | MS.gene38118:CDS |
| AAGAAGAAGAAAGGTGATGA+TGG | 0.520820 | 5.1:-79496258 | MS.gene38118:CDS |
| AAAGCCGTCCTTCAAAATCA+AGG | 0.522404 | 5.1:-79497515 | MS.gene38118:CDS |
| AACGAACTTGCTCAAACTGC+AGG | 0.523430 | 5.1:-79499164 | MS.gene38118:CDS |
| AAAGAAAGGATGATCCATCA+TGG | 0.523766 | 5.1:-79497914 | MS.gene38118:CDS |
| GGAAAGGCTAATGCTTGCAG+TGG | 0.524369 | 5.1:-79498955 | MS.gene38118:CDS |
| TTCAGGAGGAAAAGGGCTGT+TGG | 0.527911 | 5.1:-79497633 | MS.gene38118:intron |
| TATACAGAATTGAGAAATGT+TGG | 0.531104 | 5.1:-79498322 | MS.gene38118:CDS |
| TTGCTGGTCAGAGTACCTAC+GGG | 0.532070 | 5.1:-79498780 | MS.gene38118:CDS |
| GATAGAATCACTCCAGCGAC+AGG | 0.535002 | 5.1:-79496442 | MS.gene38118:CDS |
| AAGAGGAACGTTTCTCCTTG+TGG | 0.535286 | 5.1:+79498378 | None:intergenic |
| CCTCCACAGAAGAAGAAGAA+AGG | 0.537509 | 5.1:-79496267 | MS.gene38118:CDS |
| CGGCTTCTTACTTTGTGGTG+GGG | 0.538312 | 5.1:+79497597 | None:intergenic |
| TCGGTCCAAAATGATCCTTT+GGG | 0.540321 | 5.1:+79498914 | None:intergenic |
| TTTACACCGGAAGCGGTGGA+AGG | 0.542736 | 5.1:-79498696 | MS.gene38118:CDS |
| CTAGCTAGGGCAGAGGGTGT+TGG | 0.546860 | 5.1:-79499066 | MS.gene38118:CDS |
| GACCAGCAATGCCAGCAACA+TGG | 0.551617 | 5.1:+79498794 | None:intergenic |
| GATAGGGTCATAAGGTCTGC+AGG | 0.554621 | 5.1:-79498167 | MS.gene38118:intron |
| TTGCAGAAGTTGTGAGCACA+AGG | 0.559804 | 5.1:+79497288 | None:intergenic |
| GAGTGAAGAAAATGACAAGC+CGG | 0.561110 | 5.1:-79496367 | MS.gene38118:CDS |
| AGGCAGAAATTGTGCCCACA+TGG | 0.561703 | 5.1:+79499219 | None:intergenic |
| GAGCACAAGGTGTAGTAAGA+GGG | 0.563587 | 5.1:+79497301 | None:intergenic |
| TCTTGTTGGTGATACTTGGG+AGG | 0.566196 | 5.1:-79498854 | MS.gene38118:CDS |
| ACAAATTGATGAGGCTGGAG+TGG | 0.566569 | 5.1:-79496211 | MS.gene38118:CDS |
| GGATTAGTCGCCATCTTCGG+TGG | 0.567166 | 5.1:+79499132 | None:intergenic |
| TTTGAGAAATGGCTTGGGCA+AGG | 0.567925 | 5.1:-79499189 | MS.gene38118:CDS |
| GCGGTGGAAGGGATCTCAGT+GGG | 0.568471 | 5.1:-79498684 | MS.gene38118:CDS |
| CTTACATCAAAGTCCCATGA+TGG | 0.576030 | 5.1:+79497900 | None:intergenic |
| TTCCTTTACACCGGAAGCGG+TGG | 0.576676 | 5.1:-79498700 | MS.gene38118:CDS |
| GGGAGGATAGGATGGAATGT+AGG | 0.579330 | 5.1:-79498837 | MS.gene38118:CDS |
| CTTTCTTTCAGTAATATCAA+CGG | 0.579868 | 5.1:+79497929 | None:intergenic |
| ATGATCCTAATAGGAACCGT+GGG | 0.580583 | 5.1:-79498879 | MS.gene38118:CDS |
| GAGGAACAAATTGATGAGGC+TGG | 0.582753 | 5.1:-79496216 | MS.gene38118:CDS |
| AAGCAGGAGTGAGATACGAT+GGG | 0.584452 | 5.1:-79498346 | MS.gene38118:CDS |
| TCTGCAGGTATTTGTTTGTG+AGG | 0.586985 | 5.1:-79498152 | MS.gene38118:CDS |
| CGTCCTTCAAAATCAAGGAT+AGG | 0.587442 | 5.1:-79497510 | MS.gene38118:CDS |
| GAAACGTTCCTCTTATGCAC+CGG | 0.590337 | 5.1:-79498369 | MS.gene38118:CDS |
| CAGTAGGTAGTGGGCGAGGA+CGG | 0.590658 | 5.1:+79497970 | None:intergenic |
| GTGACAATGAGCCAGCTCCA+TGG | 0.592691 | 5.1:-79498128 | MS.gene38118:CDS |
| GCCAAGCTAGCTAGGGCAGA+GGG | 0.594474 | 5.1:-79499072 | MS.gene38118:CDS |
| ATGAGCCAGCTCCATGGACA+AGG | 0.595160 | 5.1:-79498122 | MS.gene38118:intron |
| ATCAAGGATAGGCTATTGAA+AGG | 0.595479 | 5.1:-79497499 | MS.gene38118:intron |
| TCCAAGAATCAACGCACAGT+TGG | 0.595787 | 5.1:-79499112 | MS.gene38118:CDS |
| ATAGGATGGAATGTAGGCAA+TGG | 0.595954 | 5.1:-79498831 | MS.gene38118:CDS |
| AAAGGATCCACAATGTTCAT+CGG | 0.596534 | 5.1:+79497577 | None:intergenic |
| TTACACCGGAAGCGGTGGAA+GGG | 0.597699 | 5.1:-79498695 | MS.gene38118:CDS |
| AAGAAAGGATGATCCATCAT+GGG | 0.600210 | 5.1:-79497913 | MS.gene38118:CDS |
| AGCACAAGGTGTAGTAAGAG+GGG | 0.602277 | 5.1:+79497302 | None:intergenic |
| GAAGCAGGAGTGAGATACGA+TGG | 0.604687 | 5.1:-79498347 | MS.gene38118:CDS |
| AGGAACAGGGCGACTCAAAG+TGG | 0.605619 | 5.1:-79497225 | MS.gene38118:CDS |
| GAAGAAAGGTGATGATGGCA+AGG | 0.606822 | 5.1:-79496253 | MS.gene38118:CDS |
| CAGGTTAACAGGGAAATGAT+GGG | 0.608219 | 5.1:-79496468 | MS.gene38118:CDS |
| CAATCTGTCGCTCTCTCGGG+TGG | 0.608341 | 5.1:-79498754 | MS.gene38118:CDS |
| GGCCAAGCTAGCTAGGGCAG+AGG | 0.611782 | 5.1:-79499073 | MS.gene38118:CDS |
| TGTGCTCACAACTTCTGCAA+AGG | 0.612302 | 5.1:-79497285 | MS.gene38118:CDS |
| TGAGTATCTTCAGAATCCAC+AGG | 0.613570 | 5.1:-79497142 | MS.gene38118:intron |
| TTGTTGGTTCAGACTCCATG+TGG | 0.613959 | 5.1:-79499234 | MS.gene38118:intron |
| GGGGAGTGGTTCCTTTACAC+CGG | 0.614315 | 5.1:-79498709 | MS.gene38118:CDS |
| CAGTGGTGTAGCATGTGTCA+GGG | 0.615057 | 5.1:+79498995 | None:intergenic |
| GGATCATACTCAGCAAGGAT+CGG | 0.615543 | 5.1:+79498895 | None:intergenic |
| TGGTTGCAATATCTGTCGCA+AGG | 0.615751 | 5.1:-79497334 | MS.gene38118:CDS |
| CCGTATGGCCAAGCTAGCTA+GGG | 0.621370 | 5.1:-79499079 | MS.gene38118:CDS |
| TAAGAAGCCGATGAACATTG+TGG | 0.621417 | 5.1:-79497584 | MS.gene38118:CDS |
| AGGTGATGATGGCAAGGCTG+TGG | 0.621772 | 5.1:-79496247 | MS.gene38118:CDS |
| AGCGACAGATTGAGCCCCGT+AGG | 0.622050 | 5.1:+79498765 | None:intergenic |
| TGAACAACAGGAAGAACAGA+TGG | 0.623198 | 5.1:-79496418 | MS.gene38118:CDS |
| TATTAGGATCATACTCAGCA+AGG | 0.623524 | 5.1:+79498890 | None:intergenic |
| TGGCAAGGCTGTGGTGAATG+TGG | 0.625687 | 5.1:-79496238 | MS.gene38118:CDS |
| ACGACGAGGATCATGGGGAG+TGG | 0.626547 | 5.1:-79498723 | MS.gene38118:CDS |
| GAGAGCAAAGAAAACAGGAA+AGG | 0.626777 | 5.1:-79498971 | MS.gene38118:CDS |
| TTAACAGTAGGTAGTGGGCG+AGG | 0.626993 | 5.1:+79497966 | None:intergenic |
| GAAAGGCTAATGCTTGCAGT+GGG | 0.626997 | 5.1:-79498954 | MS.gene38118:CDS |
| TATGATCCTAATAGGAACCG+TGG | 0.637653 | 5.1:-79498880 | MS.gene38118:CDS |
| AATCTTCGTGACTATCCCAA+AGG | 0.640437 | 5.1:-79498929 | MS.gene38118:CDS |
| TATTTGGTTCAGGTCCCACA+AGG | 0.642027 | 5.1:-79498393 | MS.gene38118:intron |
| CCCTTGAACTCCTTAACAGT+AGG | 0.642926 | 5.1:+79497954 | None:intergenic |
| CCAAAGCTATATCAGGAACA+GGG | 0.649568 | 5.1:-79497238 | MS.gene38118:CDS |
| GCTATGTCAGTTGCACAGGT+AGG | 0.652259 | 5.1:+79497165 | None:intergenic |
| GTTGGCGATTGCGATCCGTA+TGG | 0.654592 | 5.1:-79499094 | MS.gene38118:CDS |
| TGTAGACGACGAGGATCATG+GGG | 0.654974 | 5.1:-79498728 | MS.gene38118:CDS |
| ACTCCTTAACAGTAGGTAGT+GGG | 0.656580 | 5.1:+79497961 | None:intergenic |
| CCAGCAATGCCAGCAACATG+GGG | 0.663982 | 5.1:+79498796 | None:intergenic |
| ACAACAGGAAGAACAGATGG+AGG | 0.670527 | 5.1:-79496415 | MS.gene38118:CDS |
| TGTTGGTTCAGACTCCATGT+GGG | 0.679292 | 5.1:-79499233 | MS.gene38118:intron |
| AGGATGGAATGTAGGCAATG+GGG | 0.694397 | 5.1:-79498829 | MS.gene38118:CDS |
| CCTACTGTTAAGGAGTTCAA+GGG | 0.697230 | 5.1:-79497954 | MS.gene38118:CDS |
| TGTGGAGGAACAAATTGATG+AGG | 0.702307 | 5.1:-79496220 | MS.gene38118:CDS |
| TGGAGTGGAAAGCAAAACAG+TGG | 0.708838 | 5.1:-79496196 | MS.gene38118:CDS |
| AGCAGGAGTGAGATACGATG+GGG | 0.713889 | 5.1:-79498345 | MS.gene38118:CDS |
| CAAGGCTGTGGTGAATGTGG+AGG | 0.722052 | 5.1:-79496235 | MS.gene38118:CDS |
| CAAGCCGGATGAAGAGACCG+AGG | 0.726337 | 5.1:-79496352 | MS.gene38118:CDS |
| AGTCGTGGAGGAAATTAACG+AGG | 0.732114 | 5.1:-79496301 | MS.gene38118:CDS |
| AGCGGTGGAAGGGATCTCAG+TGG | 0.736744 | 5.1:-79498685 | MS.gene38118:CDS |
| TATCACCAACAAGAACCCCA+CGG | 0.739370 | 5.1:+79498863 | None:intergenic |
| TGCTGGTCAGAGTACCTACG+GGG | 0.755559 | 5.1:-79498779 | MS.gene38118:CDS |
| TGATCCTAATAGGAACCGTG+GGG | 0.767429 | 5.1:-79498878 | MS.gene38118:CDS |
| GGGTGGTTATGTAGACGACG+AGG | 0.777978 | 5.1:-79498737 | MS.gene38118:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAAATTTAAAAAAACAAAA+AGG | + | chr5.1:79496242-79496261 | None:intergenic | 10.0% |
| !! | TTCAATTAAAATATAATCAT+TGG | + | chr5.1:79496753-79496772 | None:intergenic | 10.0% |
| !!! | ATATTTGTTTTAATCAATTA+TGG | - | chr5.1:79499424-79499443 | MS.gene38118:intron | 10.0% |
| !!! | CAATTATTAAGTTTAAATTT+TGG | - | chr5.1:79498649-79498668 | MS.gene38118:CDS | 10.0% |
| !!! | AATCCATTTTAATTAGTAAA+GGG | + | chr5.1:79496658-79496677 | None:intergenic | 15.0% |
| !!! | TAATCCATTTTAATTAGTAA+AGG | + | chr5.1:79496659-79496678 | None:intergenic | 15.0% |
| !!! | TTAAAATATAATCATTGGTT+AGG | + | chr5.1:79496748-79496767 | None:intergenic | 15.0% |
| !! | ACAAAAAGGGTAAAAATTTA+AGG | + | chr5.1:79496228-79496247 | None:intergenic | 20.0% |
| !! | AGATTAGGAATACAATTAAA+AGG | + | chr5.1:79499489-79499508 | None:intergenic | 20.0% |
| !! | ATTGAAGTGTGTTAAATATT+TGG | - | chr5.1:79496767-79496786 | MS.gene38118:intron | 20.0% |
| !! | TAACAAAAACAAACTAAGTT+AGG | + | chr5.1:79496526-79496545 | None:intergenic | 20.0% |
| !! | TCCTTCAGTTAAAATTAAAT+TGG | + | chr5.1:79496964-79496983 | None:intergenic | 20.0% |
| !! | TTAATAATCATATTGATGTC+AGG | - | chr5.1:79499397-79499416 | MS.gene38118:intron | 20.0% |
| !!! | AACTTTTATTTTTCCTATCT+GGG | - | chr5.1:79498314-79498333 | MS.gene38118:CDS | 20.0% |
| !!! | ACCAATTTAATTTTAACTGA+AGG | - | chr5.1:79496960-79496979 | MS.gene38118:intron | 20.0% |
| !!! | AGAACAACTTGATAATTTTT+TGG | + | chr5.1:79497370-79497389 | None:intergenic | 20.0% |
| !!! | ATCCATTTTAATTAGTAAAG+GGG | + | chr5.1:79496657-79496676 | None:intergenic | 20.0% |
| !!! | CTTATTTATGATCTTTTAAC+AGG | - | chr5.1:79499910-79499929 | MS.gene38118:intron | 20.0% |
| !!! | TAACTTAGTTTGTTTTTGTT+AGG | - | chr5.1:79496525-79496544 | MS.gene38118:intron | 20.0% |
| !!! | TCAATATTTTAAGTACCTAA+AGG | + | chr5.1:79499668-79499687 | None:intergenic | 20.0% |
| !!! | TGAAAATGTTTGAAGTTTTT+TGG | - | chr5.1:79499733-79499752 | MS.gene38118:intron | 20.0% |
| !!! | TGATTAATTGATTCCTTATT+AGG | - | chr5.1:79497925-79497944 | MS.gene38118:CDS | 20.0% |
| !!! | TTGAACAATACAAACTTTTT+AGG | + | chr5.1:79496932-79496951 | None:intergenic | 20.0% |
| !!! | TTTTATTAGCCTAGTTTTTA+GGG | - | chr5.1:79499344-79499363 | MS.gene38118:intron | 20.0% |
| ! | AATATATACAAGTGGAAGTA+TGG | - | chr5.1:79498353-79498372 | MS.gene38118:CDS | 25.0% |
| ! | ACAATGAAACTAACCTAATA+AGG | + | chr5.1:79497941-79497960 | None:intergenic | 25.0% |
| ! | ACAGATCTAACAAACTAATA+AGG | + | chr5.1:79497884-79497903 | None:intergenic | 25.0% |
| ! | ACTGAAGTGTGTTAAATATT+TGG | - | chr5.1:79496399-79496418 | MS.gene38118:CDS | 25.0% |
| ! | AGAATTTCACATTCTCAAAA+AGG | + | chr5.1:79499557-79499576 | None:intergenic | 25.0% |
| ! | AGTGTTTACTATATTGTCTT+GGG | - | chr5.1:79499595-79499614 | MS.gene38118:intron | 25.0% |
| ! | CAACAAAAATTCAAATTGTC+AGG | - | chr5.1:79498848-79498867 | MS.gene38118:CDS | 25.0% |
| ! | CAATTAAAAGGAATTCAACA+AGG | + | chr5.1:79499477-79499496 | None:intergenic | 25.0% |
| ! | CTTTCTTTCAGTAATATCAA+CGG | + | chr5.1:79498471-79498490 | None:intergenic | 25.0% |
| ! | GAAGTTTGAAAATATGAATG+AGG | - | chr5.1:79497771-79497790 | MS.gene38118:intron | 25.0% |
| ! | GATAGGAAAAATAAAAGTTG+AGG | + | chr5.1:79498313-79498332 | None:intergenic | 25.0% |
| ! | GGAAAGTTTCATAGTAAATT+AGG | + | chr5.1:79499532-79499551 | None:intergenic | 25.0% |
| ! | TAGTGTTTACTATATTGTCT+TGG | - | chr5.1:79499594-79499613 | MS.gene38118:intron | 25.0% |
| ! | TATACAGAATTGAGAAATGT+TGG | - | chr5.1:79498075-79498094 | MS.gene38118:intron | 25.0% |
| ! | TGTTTATGGATCTGTTTATT+TGG | - | chr5.1:79497988-79498007 | MS.gene38118:CDS | 25.0% |
| !! | ACTTCAAACATTTTCATACA+CGG | + | chr5.1:79499634-79499653 | None:intergenic | 25.0% |
| !! | CATTCATATTTTCAAACTTC+TGG | + | chr5.1:79497771-79497790 | None:intergenic | 25.0% |
| !! | CTGACAATTTGAATTTTTGT+TGG | + | chr5.1:79498850-79498869 | None:intergenic | 25.0% |
| !! | TGAATTTTTGTTGGATCAAA+AGG | + | chr5.1:79498841-79498860 | None:intergenic | 25.0% |
| !!! | AAACTTTTTAGGTCATCTAA+AGG | + | chr5.1:79496921-79496940 | None:intergenic | 25.0% |
| !!! | AAGTTTTTTGGCAAATCTTT+AGG | - | chr5.1:79499745-79499764 | MS.gene38118:intron | 25.0% |
| !!! | CAACTTTTATTTTTCCTATC+TGG | - | chr5.1:79498313-79498332 | MS.gene38118:CDS | 25.0% |
| !!! | GGGAATATTTTTTTGTGATA+GGG | - | chr5.1:79498214-79498233 | MS.gene38118:intron | 25.0% |
| !!! | GTTTTATTAGCCTAGTTTTT+AGG | - | chr5.1:79499343-79499362 | MS.gene38118:intron | 25.0% |
| !!! | TCCATTTTAATTAGTAAAGG+GGG | + | chr5.1:79496656-79496675 | None:intergenic | 25.0% |
| !!! | TGTTAATTTGTCTACATTTC+AGG | - | chr5.1:79498747-79498766 | MS.gene38118:CDS | 25.0% |
| !!! | TTAATTGTTTTTGCAGAGTT+TGG | - | chr5.1:79499043-79499062 | MS.gene38118:CDS | 25.0% |
| !!! | TTGGTATGCTATTTTGTTTA+TGG | - | chr5.1:79497974-79497993 | MS.gene38118:CDS | 25.0% |
| AAAACACCTTCAAATAACAG+TGG | + | chr5.1:79498972-79498991 | None:intergenic | 30.0% | |
| AATGAAAAGAACTGTCTTGT+TGG | - | chr5.1:79499308-79499327 | MS.gene38118:intron | 30.0% | |
| ACTGAAGGATGTTAGATATT+TGG | - | chr5.1:79496975-79496994 | MS.gene38118:intron | 30.0% | |
| CATTGTGATATGTGATGAAT+TGG | - | chr5.1:79497955-79497974 | MS.gene38118:CDS | 30.0% | |
| CGATTCAATCTCAAATTACA+AGG | + | chr5.1:79496494-79496513 | None:intergenic | 30.0% | |
| CGTTGATATTACTGAAAGAA+AGG | - | chr5.1:79498469-79498488 | MS.gene38118:intron | 30.0% | |
| CTGCAAAAACAATTAACCAA+AGG | + | chr5.1:79499039-79499058 | None:intergenic | 30.0% | |
| GAAAAAAAGCTTACAGTAAC+AGG | + | chr5.1:79496206-79496225 | None:intergenic | 30.0% | |
| GAAGTTAATTGTTATCACCA+AGG | + | chr5.1:79498932-79498951 | None:intergenic | 30.0% | |
| GTTGCACTAATATATACAAG+TGG | - | chr5.1:79498345-79498364 | MS.gene38118:CDS | 30.0% | |
| TAACCAAAACAAACTCGATT+AGG | + | chr5.1:79496354-79496373 | None:intergenic | 30.0% | |
| TAGTCATTTCATAGCAGATT+AGG | + | chr5.1:79499504-79499523 | None:intergenic | 30.0% | |
| TCCCCCTTTACTAATTAAAA+TGG | - | chr5.1:79496652-79496671 | MS.gene38118:intron | 30.0% | |
| TGAACAATCGATAATCCATT+AGG | + | chr5.1:79498178-79498197 | None:intergenic | 30.0% | |
| TTATCTGAACGATTCAATCT+TGG | - | chr5.1:79496376-79496395 | MS.gene38118:CDS | 30.0% | |
| TTTCACATTCTCAAAAAGGT+TGG | + | chr5.1:79499553-79499572 | None:intergenic | 30.0% | |
| ! | AGTTTTGCTCTACATAAAAG+AGG | - | chr5.1:79499876-79499895 | MS.gene38118:intron | 30.0% |
| ! | ATAGGCTATTGAAAGGTATA+TGG | - | chr5.1:79498905-79498924 | MS.gene38118:CDS | 30.0% |
| ! | ATTGAAGCATCTTGAACATT+TGG | - | chr5.1:79497093-79497112 | MS.gene38118:intron | 30.0% |
| ! | CTAACAATACAAACTTGTTC+AGG | + | chr5.1:79497069-79497088 | None:intergenic | 30.0% |
| ! | GATCTTTTAACAGGTTAACA+GGG | - | chr5.1:79499919-79499938 | MS.gene38118:intron | 30.0% |
| ! | GTTCAAGCTTTATCATTGAT+GGG | - | chr5.1:79498193-79498212 | MS.gene38118:intron | 30.0% |
| ! | TAATTTGTCTACATTTCAGG+AGG | - | chr5.1:79498750-79498769 | MS.gene38118:CDS | 30.0% |
| ! | TGATCTTTTAACAGGTTAAC+AGG | - | chr5.1:79499918-79499937 | MS.gene38118:intron | 30.0% |
| ! | TGTTAATTCAGTTTTGCCTT+TGG | - | chr5.1:79499020-79499039 | MS.gene38118:CDS | 30.0% |
| ! | TGTTCAAGCTTTATCATTGA+TGG | - | chr5.1:79498192-79498211 | MS.gene38118:intron | 30.0% |
| ! | TTCAAGCTTTATCATTGATG+GGG | - | chr5.1:79498194-79498213 | MS.gene38118:intron | 30.0% |
| !! | TTTGTTGTTGTTGTTGTTGT+TGG | - | chr5.1:79497147-79497166 | MS.gene38118:CDS | 30.0% |
| !! | TTTTGGGAAGATTATTTGCT+AGG | - | chr5.1:79498666-79498685 | MS.gene38118:CDS | 30.0% |
| !!! | AAGTTTTGTTGCAAACCTTT+AGG | - | chr5.1:79499650-79499669 | MS.gene38118:intron | 30.0% |
| !!! | GGGGAATATTTTTTTGTGAT+AGG | - | chr5.1:79498213-79498232 | MS.gene38118:intron | 30.0% |
| !!! | TAATCGAGTTTGTTTTGGTT+AGG | - | chr5.1:79496353-79496372 | MS.gene38118:CDS | 30.0% |
| !!! | TTTGTTTTTGTTAGGTTACC+TGG | - | chr5.1:79496533-79496552 | MS.gene38118:intron | 30.0% |
| !!! | TTTTTTGTGATAGGGTCATA+AGG | - | chr5.1:79498222-79498241 | MS.gene38118:intron | 30.0% |
| AAACTATGGTACAGCAAAGT+TGG | + | chr5.1:79498709-79498728 | None:intergenic | 35.0% | |
| AAAGAAAGGATGATCCATCA+TGG | - | chr5.1:79498483-79498502 | MS.gene38118:intron | 35.0% | |
| AAAGGATCCACAATGTTCAT+CGG | + | chr5.1:79498823-79498842 | None:intergenic | 35.0% | |
| AACTATGGTACAGCAAAGTT+GGG | + | chr5.1:79498708-79498727 | None:intergenic | 35.0% | |
| AAGAAAGGATGATCCATCAT+GGG | - | chr5.1:79498484-79498503 | MS.gene38118:intron | 35.0% | |
| AAGAAGAAGAAAGGTGATGA+TGG | - | chr5.1:79500139-79500158 | MS.gene38118:intron | 35.0% | |
| AAGTTAAGATTGAATCGTCC+AGG | + | chr5.1:79496554-79496573 | None:intergenic | 35.0% | |
| ACAAAAATCAACCTTGTCCA+TGG | + | chr5.1:79498289-79498308 | None:intergenic | 35.0% | |
| ATAACAGTGGTCTAAGGAAA+AGG | + | chr5.1:79498959-79498978 | None:intergenic | 35.0% | |
| ATCAAGGATAGGCTATTGAA+AGG | - | chr5.1:79498898-79498917 | MS.gene38118:CDS | 35.0% | |
| CAAACCAAACCCTAAAAACT+AGG | + | chr5.1:79499356-79499375 | None:intergenic | 35.0% | |
| CTTCAAATAACAGTGGTCTA+AGG | + | chr5.1:79498965-79498984 | None:intergenic | 35.0% | |
| GAGAGACCTTACAAAAACTA+TGG | + | chr5.1:79498723-79498742 | None:intergenic | 35.0% | |
| TATTAGGATCATACTCAGCA+AGG | + | chr5.1:79497510-79497529 | None:intergenic | 35.0% | |
| TCTACATTTCAGGAGGAAAA+GGG | - | chr5.1:79498757-79498776 | MS.gene38118:CDS | 35.0% | |
| TGAGAATGTGAAATTCTGTC+TGG | - | chr5.1:79499560-79499579 | MS.gene38118:intron | 35.0% | |
| TTGATCTGCAGTGATTTAAC+TGG | - | chr5.1:79498401-79498420 | MS.gene38118:intron | 35.0% | |
| TTGCTGAGTATGATCCTAAT+AGG | - | chr5.1:79497509-79497528 | MS.gene38118:CDS | 35.0% | |
| ! | ACTATCCCAAAGGATCATTT+TGG | - | chr5.1:79497478-79497497 | MS.gene38118:intron | 35.0% |
| ! | ATTGAAAGGTATATGGTCCT+TGG | - | chr5.1:79498912-79498931 | MS.gene38118:CDS | 35.0% |
| ! | CTTAGACCACTGTTATTTGA+AGG | - | chr5.1:79498963-79498982 | MS.gene38118:CDS | 35.0% |
| ! | GCTGTACCATAGTTTTTGTA+AGG | - | chr5.1:79498714-79498733 | MS.gene38118:CDS | 35.0% |
| ! | TAGCCTATCCTTGATTTTGA+AGG | + | chr5.1:79498893-79498912 | None:intergenic | 35.0% |
| ! | TGGATCTGTTTATTTGGTTC+AGG | - | chr5.1:79497994-79498013 | MS.gene38118:intron | 35.0% |
| !! | CTATCCTTGATTTTGAAGGA+CGG | + | chr5.1:79498889-79498908 | None:intergenic | 35.0% |
| !! | GTCTTGTTGGACTTTTAGTT+GGG | - | chr5.1:79499321-79499340 | MS.gene38118:intron | 35.0% |
| !! | TGACCTAATCGAGTTTGTTT+TGG | - | chr5.1:79496348-79496367 | MS.gene38118:CDS | 35.0% |
| !! | TGTCTTGTTGGACTTTTAGT+TGG | - | chr5.1:79499320-79499339 | MS.gene38118:intron | 35.0% |
| !!! | AAGTGTTTTGAGAAATGGCT+TGG | - | chr5.1:79497202-79497221 | MS.gene38118:CDS | 35.0% |
| !!! | AGTGTTTTGAGAAATGGCTT+GGG | - | chr5.1:79497203-79497222 | MS.gene38118:CDS | 35.0% |
| !!! | TTAGCCTAGTTTTTAGGGTT+TGG | - | chr5.1:79499349-79499368 | MS.gene38118:intron | 35.0% |
| AAAGCCGTCCTTCAAAATCA+AGG | - | chr5.1:79498882-79498901 | MS.gene38118:CDS | 40.0% | |
| AACTCCTTAACAGTAGGTAG+TGG | + | chr5.1:79498440-79498459 | None:intergenic | 40.0% | |
| AATCTTCGTGACTATCCCAA+AGG | - | chr5.1:79497468-79497487 | MS.gene38118:intron | 40.0% | |
| ACAGGTTAACAGGGAAATGA+TGG | - | chr5.1:79499928-79499947 | MS.gene38118:intron | 40.0% | |
| ACCTACTGTTAAGGAGTTCA+AGG | - | chr5.1:79498442-79498461 | MS.gene38118:intron | 40.0% | |
| ACTATGGTACAGCAAAGTTG+GGG | + | chr5.1:79498707-79498726 | None:intergenic | 40.0% | |
| ACTCCTTAACAGTAGGTAGT+GGG | + | chr5.1:79498439-79498458 | None:intergenic | 40.0% | |
| ACTGAGAGAGCAAAGAAAAC+AGG | - | chr5.1:79497421-79497440 | MS.gene38118:intron | 40.0% | |
| ATAGGATGGAATGTAGGCAA+TGG | - | chr5.1:79497566-79497585 | MS.gene38118:CDS | 40.0% | |
| ATCGGTCCAAAATGATCCTT+TGG | + | chr5.1:79497487-79497506 | None:intergenic | 40.0% | |
| ATGATCCTAATAGGAACCGT+GGG | - | chr5.1:79497518-79497537 | MS.gene38118:CDS | 40.0% | |
| CAAACTTCTGGTCAAATGAC+TGG | + | chr5.1:79497759-79497778 | None:intergenic | 40.0% | |
| CAGAAATGTAATACGCAGCA+CGG | + | chr5.1:79498581-79498600 | None:intergenic | 40.0% | |
| CAGGTTAACAGGGAAATGAT+GGG | - | chr5.1:79499929-79499948 | MS.gene38118:intron | 40.0% | |
| CCAAAGCTATATCAGGAACA+GGG | - | chr5.1:79499159-79499178 | MS.gene38118:CDS | 40.0% | |
| CCTACTGTTAAGGAGTTCAA+GGG | - | chr5.1:79498443-79498462 | MS.gene38118:intron | 40.0% | |
| CGTCCTTCAAAATCAAGGAT+AGG | - | chr5.1:79498887-79498906 | MS.gene38118:CDS | 40.0% | |
| CTTACATCAAAGTCCCATGA+TGG | + | chr5.1:79498500-79498519 | None:intergenic | 40.0% | |
| GAGAGCAAAGAAAACAGGAA+AGG | - | chr5.1:79497426-79497445 | MS.gene38118:intron | 40.0% | |
| GAGTGAAGAAAATGACAAGC+CGG | - | chr5.1:79500030-79500049 | MS.gene38118:intron | 40.0% | |
| GCCATTTCTCAAAACACTTC+AGG | + | chr5.1:79497201-79497220 | None:intergenic | 40.0% | |
| GTACATTGAGTGAGACCTAA+TGG | - | chr5.1:79498160-79498179 | MS.gene38118:CDS | 40.0% | |
| GTCTACATTTCAGGAGGAAA+AGG | - | chr5.1:79498756-79498775 | MS.gene38118:CDS | 40.0% | |
| GTCTCACTCAATGTACTTAC+TGG | + | chr5.1:79498156-79498175 | None:intergenic | 40.0% | |
| TAAGAAGCCGATGAACATTG+TGG | - | chr5.1:79498813-79498832 | MS.gene38118:CDS | 40.0% | |
| TAGGATGGAATGTAGGCAAT+GGG | - | chr5.1:79497567-79497586 | MS.gene38118:CDS | 40.0% | |
| TATGATCCTAATAGGAACCG+TGG | - | chr5.1:79497517-79497536 | MS.gene38118:CDS | 40.0% | |
| TCACCTTTCTTCTTCTTCTG+TGG | + | chr5.1:79500136-79500155 | None:intergenic | 40.0% | |
| TCGGTCCAAAATGATCCTTT+GGG | + | chr5.1:79497486-79497505 | None:intergenic | 40.0% | |
| TCTGCAGGTATTTGTTTGTG+AGG | - | chr5.1:79498245-79498264 | MS.gene38118:intron | 40.0% | |
| TGAACAACAGGAAGAACAGA+TGG | - | chr5.1:79499979-79499998 | MS.gene38118:intron | 40.0% | |
| TGAGTATCTTCAGAATCCAC+AGG | - | chr5.1:79499255-79499274 | MS.gene38118:intron | 40.0% | |
| TGATTCGAGTGAAAAAGTCG+TGG | - | chr5.1:79500081-79500100 | MS.gene38118:intron | 40.0% | |
| ! | TGTTTTCTTTGCTCTCTCAG+TGG | + | chr5.1:79497422-79497441 | None:intergenic | 40.0% |
| ! | TTTCTGGCCAAAGCTATATC+AGG | - | chr5.1:79499152-79499171 | MS.gene38118:CDS | 40.0% |
| ! | TTTTCCTATCTGGGTGTTTG+TGG | - | chr5.1:79498323-79498342 | MS.gene38118:CDS | 40.0% |
| !! | AAGGACGGCTTTATAGCTTT+TGG | + | chr5.1:79498874-79498893 | None:intergenic | 40.0% |
| !! | GATATAGCTTTGGCCAGAAA+AGG | + | chr5.1:79499152-79499171 | None:intergenic | 40.0% |
| !! | GGTTCTTGTTGGTGATACTT+GGG | - | chr5.1:79497540-79497559 | MS.gene38118:CDS | 40.0% |
| !! | TTCATCGGCTTCTTACTTTG+TGG | + | chr5.1:79498808-79498827 | None:intergenic | 40.0% |
| !!! | ATCAGAGGATTTTGAGACCT+CGG | + | chr5.1:79500065-79500084 | None:intergenic | 40.0% |
| !!! | GACTTTTTCACTCGAATCAG+AGG | + | chr5.1:79500080-79500099 | None:intergenic | 40.0% |
| !!! | GCCTGAAGTGTTTTGAGAAA+TGG | - | chr5.1:79497197-79497216 | MS.gene38118:CDS | 40.0% |
| AAGAGGAACGTTTCTCCTTG+TGG | + | chr5.1:79498022-79498041 | None:intergenic | 45.0% | |
| AAGCAGGAGTGAGATACGAT+GGG | - | chr5.1:79498051-79498070 | MS.gene38118:intron | 45.0% | |
| AATACGTGCAGTAGTACCTG+TGG | + | chr5.1:79499274-79499293 | None:intergenic | 45.0% | |
| AATGTAATACGCAGCACGGA+AGG | + | chr5.1:79498577-79498596 | None:intergenic | 45.0% | |
| ACAAATTGATGAGGCTGGAG+TGG | - | chr5.1:79500186-79500205 | MS.gene38118:intron | 45.0% | |
| ACAACAGGAAGAACAGATGG+AGG | - | chr5.1:79499982-79500001 | MS.gene38118:intron | 45.0% | |
| ACGAACCTAACAACACGAAC+AGG | + | chr5.1:79497826-79497845 | None:intergenic | 45.0% | |
| AGAGGAACGTTTCTCCTTGT+GGG | + | chr5.1:79498021-79498040 | None:intergenic | 45.0% | |
| AGCACAAGGTGTAGTAAGAG+GGG | + | chr5.1:79499098-79499117 | None:intergenic | 45.0% | |
| AGGATGGAATGTAGGCAATG+GGG | - | chr5.1:79497568-79497587 | MS.gene38118:CDS | 45.0% | |
| AGTCGTGGAGGAAATTAACG+AGG | - | chr5.1:79500096-79500115 | MS.gene38118:intron | 45.0% | |
| ATGTAGACGACGAGGATCAT+GGG | - | chr5.1:79497668-79497687 | MS.gene38118:intron | 45.0% | |
| CAATATCTGTCGCAAGGTGT+TGG | - | chr5.1:79499069-79499088 | MS.gene38118:CDS | 45.0% | |
| CCCTGTTCCTGATATAGCTT+TGG | + | chr5.1:79499162-79499181 | None:intergenic | 45.0% | |
| CCCTTGAACTCCTTAACAGT+AGG | + | chr5.1:79498446-79498465 | None:intergenic | 45.0% | |
| CCTCCACAGAAGAAGAAGAA+AGG | - | chr5.1:79500130-79500149 | MS.gene38118:intron | 45.0% | |
| CCTTTCTTCTTCTTCTGTGG+AGG | + | chr5.1:79500133-79500152 | None:intergenic | 45.0% | |
| CTTACAGTAACAGGTCTCTC+AGG | + | chr5.1:79496197-79496216 | None:intergenic | 45.0% | |
| GAAACGTTCCTCTTATGCAC+CGG | - | chr5.1:79498028-79498047 | MS.gene38118:intron | 45.0% | |
| GAAAGGCTAATGCTTGCAGT+GGG | - | chr5.1:79497443-79497462 | MS.gene38118:intron | 45.0% | |
| GAACAGATGGAGGAGAATTC+TGG | - | chr5.1:79499992-79500011 | MS.gene38118:intron | 45.0% | |
| GAGAAATGTTGGCGCAAAGT+TGG | - | chr5.1:79498086-79498105 | MS.gene38118:intron | 45.0% | |
| GAGCACAAGGTGTAGTAAGA+GGG | + | chr5.1:79499099-79499118 | None:intergenic | 45.0% | |
| GCCAAAGCTATATCAGGAAC+AGG | - | chr5.1:79499158-79499177 | MS.gene38118:CDS | 45.0% | |
| GGATCATACTCAGCAAGGAT+CGG | + | chr5.1:79497505-79497524 | None:intergenic | 45.0% | |
| TATCACCAACAAGAACCCCA+CGG | + | chr5.1:79497537-79497556 | None:intergenic | 45.0% | |
| TATGTAGACGACGAGGATCA+TGG | - | chr5.1:79497667-79497686 | MS.gene38118:intron | 45.0% | |
| TCCAAGAATCAACGCACAGT+TGG | - | chr5.1:79497285-79497304 | MS.gene38118:CDS | 45.0% | |
| TCGGCTTCTTACTTTGTGGT+GGG | + | chr5.1:79498804-79498823 | None:intergenic | 45.0% | |
| TGAGCACAAGGTGTAGTAAG+AGG | + | chr5.1:79499100-79499119 | None:intergenic | 45.0% | |
| TGATACTTGGGAGGATAGGA+TGG | - | chr5.1:79497552-79497571 | MS.gene38118:CDS | 45.0% | |
| TGATCCTAATAGGAACCGTG+GGG | - | chr5.1:79497519-79497538 | MS.gene38118:CDS | 45.0% | |
| TGGAGTGGAAAGCAAAACAG+TGG | - | chr5.1:79500201-79500220 | MS.gene38118:intron | 45.0% | |
| TGGTTGCAATATCTGTCGCA+AGG | - | chr5.1:79499063-79499082 | MS.gene38118:CDS | 45.0% | |
| TGTGCTCACAACTTCTGCAA+AGG | - | chr5.1:79499112-79499131 | MS.gene38118:CDS | 45.0% | |
| TTCGAGTGAAAAAGTCGTGG+AGG | - | chr5.1:79500084-79500103 | MS.gene38118:intron | 45.0% | |
| TTGCAGAAGTTGTGAGCACA+AGG | + | chr5.1:79499112-79499131 | None:intergenic | 45.0% | |
| ! | AACGAACTTGCTCAAACTGC+AGG | - | chr5.1:79497233-79497252 | MS.gene38118:CDS | 45.0% |
| ! | ATCGGCTTCTTACTTTGTGG+TGG | + | chr5.1:79498805-79498824 | None:intergenic | 45.0% |
| ! | ATTGCTGGTCAGAGTACCTA+CGG | - | chr5.1:79497616-79497635 | MS.gene38118:CDS | 45.0% |
| ! | CACGAACAGGATAGCCTTTT+CGG | + | chr5.1:79497813-79497832 | None:intergenic | 45.0% |
| ! | GCTATCCTGTTCGTGTTGTT+AGG | - | chr5.1:79497818-79497837 | MS.gene38118:intron | 45.0% |
| ! | TATTTGGTTCAGGTCCCACA+AGG | - | chr5.1:79498004-79498023 | MS.gene38118:intron | 45.0% |
| ! | TTGGTGATACTTGGGAGGAT+AGG | - | chr5.1:79497548-79497567 | MS.gene38118:CDS | 45.0% |
| ! | TTTGAGAAATGGCTTGGGCA+AGG | - | chr5.1:79497208-79497227 | MS.gene38118:CDS | 45.0% |
| !! | CTTGGATTAGTCGCCATCTT+CGG | + | chr5.1:79497271-79497290 | None:intergenic | 45.0% |
| !! | GAAGAAAGGTGATGATGGCA+AGG | - | chr5.1:79500144-79500163 | MS.gene38118:intron | 45.0% |
| !! | GGGTTCTTGTTGGTGATACT+TGG | - | chr5.1:79497539-79497558 | MS.gene38118:CDS | 45.0% |
| !! | TCTTGTTGGTGATACTTGGG+AGG | - | chr5.1:79497543-79497562 | MS.gene38118:CDS | 45.0% |
| !! | TGTTGGTTCAGACTCCATGT+GGG | - | chr5.1:79497164-79497183 | MS.gene38118:CDS | 45.0% |
| !! | TTGTTGGTTCAGACTCCATG+TGG | - | chr5.1:79497163-79497182 | MS.gene38118:CDS | 45.0% |
| !! | TAAATTTAAAAAAACAAAAA+GGG | + | chr5.1:79496241-79496260 | None:intergenic | 5.0% |
| !!! | AATTATTAAGTTTAAATTTT+GGG | - | chr5.1:79498650-79498669 | MS.gene38118:CDS | 5.0% |
| ACCAGCAATGCCAGCAACAT+GGG | + | chr5.1:79497605-79497624 | None:intergenic | 50.0% | |
| AGAACCCCACGGTTCCTATT+AGG | + | chr5.1:79497526-79497545 | None:intergenic | 50.0% | |
| AGCAGGAGTGAGATACGATG+GGG | - | chr5.1:79498052-79498071 | MS.gene38118:intron | 50.0% | |
| AGGCAGAAATTGTGCCCACA+TGG | + | chr5.1:79497181-79497200 | None:intergenic | 50.0% | |
| ATCAACCTTGTCCATGGAGC+TGG | + | chr5.1:79498283-79498302 | None:intergenic | 50.0% | |
| CAACTTCTGCAAAGGCTGCT+TGG | - | chr5.1:79499120-79499139 | MS.gene38118:CDS | 50.0% | |
| CAGTGGTGTAGCATGTGTCA+GGG | + | chr5.1:79497405-79497424 | None:intergenic | 50.0% | |
| CGGCTTCTTACTTTGTGGTG+GGG | + | chr5.1:79498803-79498822 | None:intergenic | 50.0% | |
| CTCAAAGTGGACGCAGTTTG+CGG | - | chr5.1:79499185-79499204 | MS.gene38118:CDS | 50.0% | |
| CTCAGCTATGTCAGTTGCAC+AGG | + | chr5.1:79499239-79499258 | None:intergenic | 50.0% | |
| GAAGCAGGAGTGAGATACGA+TGG | - | chr5.1:79498050-79498069 | MS.gene38118:intron | 50.0% | |
| GACTGCAATTCCACCGAAGA+TGG | - | chr5.1:79497255-79497274 | MS.gene38118:CDS | 50.0% | |
| GATAGAATCACTCCAGCGAC+AGG | - | chr5.1:79499955-79499974 | MS.gene38118:intron | 50.0% | |
| GATAGGGTCATAAGGTCTGC+AGG | - | chr5.1:79498230-79498249 | MS.gene38118:intron | 50.0% | |
| GCAACCACAAACACCCAGAT+AGG | + | chr5.1:79498330-79498349 | None:intergenic | 50.0% | |
| GCTATGTCAGTTGCACAGGT+AGG | + | chr5.1:79499235-79499254 | None:intergenic | 50.0% | |
| GGAAAGGCTAATGCTTGCAG+TGG | - | chr5.1:79497442-79497461 | MS.gene38118:intron | 50.0% | |
| GGCTTCTTACTTTGTGGTGG+GGG | + | chr5.1:79498802-79498821 | None:intergenic | 50.0% | |
| GGGAGGATAGGATGGAATGT+AGG | - | chr5.1:79497560-79497579 | MS.gene38118:CDS | 50.0% | |
| TCAGTGGTGTAGCATGTGTC+AGG | + | chr5.1:79497406-79497425 | None:intergenic | 50.0% | |
| TCGCCCACTACCTACTGTTA+AGG | - | chr5.1:79498433-79498452 | MS.gene38118:intron | 50.0% | |
| TCGTATCTCACTCCTGCTTC+CGG | + | chr5.1:79498050-79498069 | None:intergenic | 50.0% | |
| TGGTTCCTTTACACCGGAAG+CGG | - | chr5.1:79497694-79497713 | MS.gene38118:intron | 50.0% | |
| TGTAGACGACGAGGATCATG+GGG | - | chr5.1:79497669-79497688 | MS.gene38118:intron | 50.0% | |
| TTCAGGAGGAAAAGGGCTGT+TGG | - | chr5.1:79498764-79498783 | MS.gene38118:CDS | 50.0% | |
| TTCTGCAAAGGCTGCTTGGA+GGG | - | chr5.1:79499124-79499143 | MS.gene38118:CDS | 50.0% | |
| TTGCGAACCAGTTGCCGAAA+AGG | - | chr5.1:79497796-79497815 | MS.gene38118:intron | 50.0% | |
| ! | AGGATAGCCTTTTCGGCAAC+TGG | + | chr5.1:79497806-79497825 | None:intergenic | 50.0% |
| ! | GCTCATTTTCCCCATGTTGC+TGG | - | chr5.1:79497592-79497611 | MS.gene38118:CDS | 50.0% |
| ! | TTGCTGGTCAGAGTACCTAC+GGG | - | chr5.1:79497617-79497636 | MS.gene38118:CDS | 50.0% |
| !! | GCCAACTGTGCGTTGATTCT+TGG | + | chr5.1:79497289-79497308 | None:intergenic | 50.0% |
| !! | TTAACAGTAGGTAGTGGGCG+AGG | + | chr5.1:79498434-79498453 | None:intergenic | 50.0% |
| AGGAACAGGGCGACTCAAAG+TGG | - | chr5.1:79499172-79499191 | MS.gene38118:CDS | 55.0% | |
| AGGAACCGTGGGGTTCTTGT+TGG | - | chr5.1:79497529-79497548 | MS.gene38118:CDS | 55.0% | |
| ATGAGCCAGCTCCATGGACA+AGG | - | chr5.1:79498275-79498294 | MS.gene38118:intron | 55.0% | |
| CCAGCAATGCCAGCAACATG+GGG | + | chr5.1:79497604-79497623 | None:intergenic | 55.0% | |
| CCGTATGGCCAAGCTAGCTA+GGG | - | chr5.1:79497318-79497337 | MS.gene38118:CDS | 55.0% | |
| CTTCTGCAAAGGCTGCTTGG+AGG | - | chr5.1:79499123-79499142 | MS.gene38118:CDS | 55.0% | |
| GACCAGCAATGCCAGCAACA+TGG | + | chr5.1:79497606-79497625 | None:intergenic | 55.0% | |
| GAGACCTCGGTCTCTTCATC+CGG | + | chr5.1:79500052-79500071 | None:intergenic | 55.0% | |
| GCTCAATCTGTCGCTCTCTC+GGG | - | chr5.1:79497640-79497659 | MS.gene38118:intron | 55.0% | |
| GGCTCAATCTGTCGCTCTCT+CGG | - | chr5.1:79497639-79497658 | MS.gene38118:intron | 55.0% | |
| GGGGAGTGGTTCCTTTACAC+CGG | - | chr5.1:79497688-79497707 | MS.gene38118:intron | 55.0% | |
| GGGTGGTTATGTAGACGACG+AGG | - | chr5.1:79497660-79497679 | MS.gene38118:intron | 55.0% | |
| GTGACAATGAGCCAGCTCCA+TGG | - | chr5.1:79498269-79498288 | MS.gene38118:intron | 55.0% | |
| GTTGGCGATTGCGATCCGTA+TGG | - | chr5.1:79497303-79497322 | MS.gene38118:CDS | 55.0% | |
| TCCGTATGGCCAAGCTAGCT+AGG | - | chr5.1:79497317-79497336 | MS.gene38118:CDS | 55.0% | |
| TCCTCTTATGCACCGGAAGC+AGG | - | chr5.1:79498035-79498054 | MS.gene38118:intron | 55.0% | |
| TCCTGCTTCCGGTGCATAAG+AGG | + | chr5.1:79498039-79498058 | None:intergenic | 55.0% | |
| TGGCAAGGCTGTGGTGAATG+TGG | - | chr5.1:79500159-79500178 | MS.gene38118:intron | 55.0% | |
| TTACACCGGAAGCGGTGGAA+GGG | - | chr5.1:79497702-79497721 | MS.gene38118:intron | 55.0% | |
| TTCCACCGCTTCCGGTGTAA+AGG | + | chr5.1:79497702-79497721 | None:intergenic | 55.0% | |
| TTCCTTTACACCGGAAGCGG+TGG | - | chr5.1:79497697-79497716 | MS.gene38118:intron | 55.0% | |
| TTTACACCGGAAGCGGTGGA+AGG | - | chr5.1:79497701-79497720 | MS.gene38118:intron | 55.0% | |
| ! | AGGAAAAGGGCTGTTGGCTG+TGG | - | chr5.1:79498770-79498789 | MS.gene38118:CDS | 55.0% |
| ! | CCCTAGCTAGCTTGGCCATA+CGG | + | chr5.1:79497321-79497340 | None:intergenic | 55.0% |
| ! | TGCTGGTCAGAGTACCTACG+GGG | - | chr5.1:79497618-79497637 | MS.gene38118:CDS | 55.0% |
| !! | AGGTGATGATGGCAAGGCTG+TGG | - | chr5.1:79500150-79500169 | MS.gene38118:intron | 55.0% |
| !! | GGATTAGTCGCCATCTTCGG+TGG | + | chr5.1:79497268-79497287 | None:intergenic | 55.0% |
| !!! | TGCTTGGAGGGTGCCTTTTC+TGG | - | chr5.1:79499136-79499155 | MS.gene38118:CDS | 55.0% |
| ACCCTCTGCCCTAGCTAGCT+TGG | + | chr5.1:79497329-79497348 | None:intergenic | 60.0% | |
| ACGACGAGGATCATGGGGAG+TGG | - | chr5.1:79497674-79497693 | MS.gene38118:intron | 60.0% | |
| AGCGACAGATTGAGCCCCGT+AGG | + | chr5.1:79497635-79497654 | None:intergenic | 60.0% | |
| AGCGGTGGAAGGGATCTCAG+TGG | - | chr5.1:79497712-79497731 | MS.gene38118:intron | 60.0% | |
| CAAGCCGGATGAAGAGACCG+AGG | - | chr5.1:79500045-79500064 | MS.gene38118:intron | 60.0% | |
| CAATCTGTCGCTCTCTCGGG+TGG | - | chr5.1:79497643-79497662 | MS.gene38118:intron | 60.0% | |
| CCAGCGACAGGCTGAACAAC+AGG | - | chr5.1:79499967-79499986 | MS.gene38118:intron | 60.0% | |
| CCCCATGTTGCTGGCATTGC+TGG | - | chr5.1:79497601-79497620 | MS.gene38118:CDS | 60.0% | |
| CCTGTTGTTCAGCCTGTCGC+TGG | + | chr5.1:79499970-79499989 | None:intergenic | 60.0% | |
| GAGATCCCTTCCACCGCTTC+CGG | + | chr5.1:79497710-79497729 | None:intergenic | 60.0% | |
| GCCAAGCTAGCTAGGGCAGA+GGG | - | chr5.1:79497325-79497344 | MS.gene38118:CDS | 60.0% | |
| GCGGTGGAAGGGATCTCAGT+GGG | - | chr5.1:79497713-79497732 | MS.gene38118:intron | 60.0% | |
| ! | CTAGCTAGGGCAGAGGGTGT+TGG | - | chr5.1:79497331-79497350 | MS.gene38118:CDS | 60.0% |
| !! | CAGTAGGTAGTGGGCGAGGA+CGG | + | chr5.1:79498430-79498449 | None:intergenic | 60.0% |
| GGCCAAGCTAGCTAGGGCAG+AGG | - | chr5.1:79497324-79497343 | MS.gene38118:CDS | 65.0% | |
| !! | GCTAGGGCAGAGGGTGTTGG+TGG | - | chr5.1:79497334-79497353 | MS.gene38118:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 79496185 | 79500234 | 79496185 | ID=MS.gene38118 |
| chr5.1 | mRNA | 79496185 | 79500234 | 79496185 | ID=MS.gene38118.t1;Parent=MS.gene38118 |
| chr5.1 | exon | 79500208 | 79500234 | 79500208 | ID=MS.gene38118.t1.exon1;Parent=MS.gene38118.t1 |
| chr5.1 | CDS | 79500208 | 79500234 | 79500208 | ID=cds.MS.gene38118.t1;Parent=MS.gene38118.t1 |
| chr5.1 | exon | 79498580 | 79499244 | 79498580 | ID=MS.gene38118.t1.exon2;Parent=MS.gene38118.t1 |
| chr5.1 | CDS | 79498580 | 79499244 | 79498580 | ID=cds.MS.gene38118.t1;Parent=MS.gene38118.t1 |
| chr5.1 | exon | 79498304 | 79498403 | 79498304 | ID=MS.gene38118.t1.exon3;Parent=MS.gene38118.t1 |
| chr5.1 | CDS | 79498304 | 79498403 | 79498304 | ID=cds.MS.gene38118.t1;Parent=MS.gene38118.t1 |
| chr5.1 | exon | 79498123 | 79498184 | 79498123 | ID=MS.gene38118.t1.exon4;Parent=MS.gene38118.t1 |
| chr5.1 | CDS | 79498123 | 79498184 | 79498123 | ID=cds.MS.gene38118.t1;Parent=MS.gene38118.t1 |
| chr5.1 | exon | 79497905 | 79498007 | 79497905 | ID=MS.gene38118.t1.exon5;Parent=MS.gene38118.t1 |
| chr5.1 | CDS | 79497905 | 79498007 | 79497905 | ID=cds.MS.gene38118.t1;Parent=MS.gene38118.t1 |
| chr5.1 | exon | 79497500 | 79497650 | 79497500 | ID=MS.gene38118.t1.exon6;Parent=MS.gene38118.t1 |
| chr5.1 | CDS | 79497500 | 79497650 | 79497500 | ID=cds.MS.gene38118.t1;Parent=MS.gene38118.t1 |
| chr5.1 | exon | 79497143 | 79497360 | 79497143 | ID=MS.gene38118.t1.exon7;Parent=MS.gene38118.t1 |
| chr5.1 | CDS | 79497143 | 79497360 | 79497143 | ID=cds.MS.gene38118.t1;Parent=MS.gene38118.t1 |
| chr5.1 | exon | 79496185 | 79496487 | 79496185 | ID=MS.gene38118.t1.exon8;Parent=MS.gene38118.t1 |
| chr5.1 | CDS | 79496185 | 79496487 | 79496185 | ID=cds.MS.gene38118.t1;Parent=MS.gene38118.t1 |
| Gene Sequence |
| Protein sequence |
